No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20480 |
| malus_domestica | MD03G1011000.v1.1 |
| prunus_persica | Prupe.2G113800_v2.0.a1 Prupe.6G011500_v2.0.a1 |
| pyrus_communis | pycom03g00980 |
| rosa_chinensis | RchiOBHm_Chr5g0081401 |
| rosa_laevigata | RLG00000019067 RLG00000021682 |
| rosa_multiflora | Rmu_sc0002735.1_g000021 Rmu_sc0005344.1_g000012 |
| rosa_roxburghii | Rroxscaffold_1G00002140 Rroxscaffold_2G00083930 |
| rosa_rugosa | Rorug05G0476100 |
| rosa_samantha | Rh2AG593500 Rh2BG605100 Rh2CG575900 Rh5BG552000 |
| rosa_wichuraiana | Rw2G049420 Rw5G049060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 79 |
| AclWI | GGATC | 2 cut(s) | 116, 129 |
| AcuI | CTGAAG | 1 cut(s) | 83 |
| AluBI | AGCT | 1 cut(s) | 143 |
| AluI | AGCT | 1 cut(s) | 143 |
| Alw26I | GTCTC | 3 cut(s) | 11, 22, 125 |
| AlwI | GGATC | 2 cut(s) | 116, 129 |
| AspS9I | GGNCC | 1 cut(s) | 103 |
| AvaII | GGWCC | 1 cut(s) | 103 |
| BamHI | GGATCC | 1 cut(s) | 121 |
| BccI | CCATC | 1 cut(s) | 187 |
| BceAI | ACGGC | 1 cut(s) | 59 |
| BclI | TGATCA | 1 cut(s) | 171 |
| BcoDI | GTCTC | 3 cut(s) | 11, 22, 125 |
| BfmI | CTRYAG | 1 cut(s) | 12 |
| BfuAI | ACCTGC | 1 cut(s) | 79 |
| Bme18I | GGWCC | 1 cut(s) | 103 |
| BmgT120I | GGNCC | 1 cut(s) | 103 |
| BmiI | GGNNCC | 2 cut(s) | 105, 123 |
| BsaI | GGTCTC | 1 cut(s) | 22 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 34 |
| BseMII | CTCAG | 3 cut(s) | 65, 104, 140 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BsmAI | GTCTC | 3 cut(s) | 11, 22, 125 |
| Bso31I | GGTCTC | 1 cut(s) | 22 |
| Bsp143I | GATC | 3 cut(s) | 116, 121, 171 |
| BspCNI | CTCAG | 3 cut(s) | 64, 105, 141 |
| BspLI | GGNNCC | 2 cut(s) | 105, 123 |
| BspMI | ACCTGC | 1 cut(s) | 79 |
| BspPI | GGATC | 2 cut(s) | 116, 129 |
| BspTNI | GGTCTC | 1 cut(s) | 22 |
| BssMI | GATC | 3 cut(s) | 116, 121, 171 |
| Bst4CI | ACNGT | 1 cut(s) | 43 |
| BstDEI | CTNAG | 3 cut(s) | 51, 113, 149 |
| BstKTI | GATC | 3 cut(s) | 119, 124, 174 |
| BstMAI | GTCTC | 3 cut(s) | 11, 22, 125 |
| BstMBI | GATC | 3 cut(s) | 116, 121, 171 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 154 |
| BstSFI | CTRYAG | 1 cut(s) | 12 |
| BstX2I | RGATCY | 1 cut(s) | 121 |
| BstYI | RGATCY | 1 cut(s) | 121 |
| BveI | ACCTGC | 1 cut(s) | 79 |
| Cfr13I | GGNCC | 1 cut(s) | 103 |
| CviJI | RGCY | 1 cut(s) | 143 |
| CviKI_1 | RGCY | 1 cut(s) | 143 |
| DdeI | CTNAG | 3 cut(s) | 51, 113, 149 |
| DpnI | GATC | 3 cut(s) | 118, 123, 173 |
| DpnII | GATC | 3 cut(s) | 116, 121, 171 |
| Eco31I | GGTCTC | 1 cut(s) | 22 |
| Eco47I | GGWCC | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 1 cut(s) | 83 |
| EcoO109I | RGGNCCY | 1 cut(s) | 103 |
| FbaI | TGATCA | 1 cut(s) | 171 |
| HapII | CCGG | 1 cut(s) | 23 |
| HinfI | GANTC | 2 cut(s) | 19, 185 |
| HpaII | CCGG | 1 cut(s) | 23 |
| Hpy188I | TCNGA | 6 cut(s) | 54, 68, 114, 121, 176, 184 |
| Hpy188III | TCNNGA | 1 cut(s) | 101 |
| HpyAV | CCTTC | 1 cut(s) | 168 |
| HpyCH4III | ACNGT | 1 cut(s) | 43 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 154 |
| HpyF3I | CTNAG | 3 cut(s) | 51, 113, 149 |
| Ksp22I | TGATCA | 1 cut(s) | 171 |
| Kzo9I | GATC | 3 cut(s) | 116, 121, 171 |
| LpnPI | CCDG | 4 cut(s) | 36, 84, 86, 105 |
| MalI | GATC | 3 cut(s) | 118, 123, 173 |
| MboI | GATC | 3 cut(s) | 116, 121, 171 |
| MboII | GAAGA | 3 cut(s) | 16, 89, 149 |
| MflI | RGATCY | 1 cut(s) | 121 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MnlI | CCTC | 1 cut(s) | 69 |
| MseI | TTAA | 1 cut(s) | 45 |
| MspI | CCGG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 154 |
| NdeII | GATC | 3 cut(s) | 116, 121, 171 |
| NlaIV | GGNNCC | 2 cut(s) | 105, 123 |
| PfeI | GAWTC | 1 cut(s) | 185 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| PpuMI | RGGWCCY | 1 cut(s) | 103 |
| Psp5II | RGGWCCY | 1 cut(s) | 103 |
| PspN4I | GGNNCC | 2 cut(s) | 105, 123 |
| PspPI | GGNCC | 1 cut(s) | 103 |
| PspPPI | RGGWCCY | 1 cut(s) | 103 |
| PsuI | RGATCY | 1 cut(s) | 121 |
| SaqAI | TTAA | 1 cut(s) | 45 |
| Sau3AI | GATC | 3 cut(s) | 116, 121, 171 |
| Sau96I | GGNCC | 1 cut(s) | 103 |
| SchI | GAGTC | 1 cut(s) | 13 |
| SetI | ASST | 4 cut(s) | 61, 73, 94, 145 |
| SfcI | CTRYAG | 1 cut(s) | 12 |
| SgeI | CNNG | 5 cut(s) | 35, 39, 83, 104, 113 |
| SinI | GGWCC | 1 cut(s) | 103 |
| TaaI | ACNGT | 1 cut(s) | 43 |
| TaqII | GACCGA | 1 cut(s) | 46 |
| TfiI | GAWTC | 1 cut(s) | 185 |
| Tru1I | TTAA | 1 cut(s) | 45 |
| Tru9I | TTAA | 1 cut(s) | 45 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 1 cut(s) | 103 |