pycom03g00980

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
762107 .. 762425
319 bp
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UTR
Exon/CDS
Intron
pycom03g00980.2

Sequence Viewer

Length: 213 bp
ATGAAGGGGTCGGACTCTGAAACCTCAAGGAAATCCGGCAACAACAAAGACAAGTCCACAAAGCCTCCCTTCATTCCGGCCAAAGACGACACCAAACCAGTTCTCCAAGACCCTATACTGAGATCCGACCCGATTGAGACGGAGGAAGCCGTGCTCCGGTTGCCGCCCTTCCCAATTGCCAGATCAACAAATCCTCCGCCCAAAATGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

7.7

Weight (kDa)

9.16

Isoelectric Point (pI)

90.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 164, 197
AclWI GGATC 1 cut(s) 117
AcoI YGGCCR 1 cut(s) 78
AfiI CCNNNNNNNGG 1 cut(s) 156
Alw21I GWGCWC 1 cut(s) 156
Alw26I GTCTC 1 cut(s) 131
AlwI GGATC 1 cut(s) 117
AoxI GGCC 1 cut(s) 78
Bbv12I GWGCWC 1 cut(s) 156
BceAI ACGGC 1 cut(s) 134
BcoDI GTCTC 1 cut(s) 131
BisI GCNGC 1 cut(s) 164
BlsI GCNGC 1 cut(s) 165
BpuEI CTTGAG 1 cut(s) 10
BsaWI WCCGGW 1 cut(s) 156
BsaXI ACNNNNNCTCC 6 cut(s) 49, 79, 87, 117, 178, 208
Bsc4I CCNNNNNNNGG 1 cut(s) 156
Bse1I ACTGG 1 cut(s) 98
BseLI CCNNNNNNNGG 1 cut(s) 156
BseMII CTCAG 1 cut(s) 110
BseNI ACTGG 1 cut(s) 98
BshFI GGCC 1 cut(s) 80
BsiHKAI GWGCWC 1 cut(s) 156
BsiSI CCGG 3 cut(s) 36, 77, 157
BslI CCNNNNNNNGG 1 cut(s) 156
BsmAI GTCTC 1 cut(s) 131
BsmBI CGTCTC 1 cut(s) 131
BsnI GGCC 1 cut(s) 80
Bsp1286I GDGCHC 1 cut(s) 156
Bsp143I GATC 2 cut(s) 122, 182
BspACI CCGC 2 cut(s) 164, 197
BspANI GGCC 1 cut(s) 80
BspCNI CTCAG 1 cut(s) 111
BspPI GGATC 1 cut(s) 117
BsrI ACTGG 1 cut(s) 98
BssMI GATC 2 cut(s) 122, 182
BstDEI CTNAG 1 cut(s) 119
BstKTI GATC 2 cut(s) 125, 185
BstMAI GTCTC 1 cut(s) 131
BstMBI GATC 2 cut(s) 122, 182
BstMWI GCNNNNNNNGC 1 cut(s) 160
BstX2I RGATCY 1 cut(s) 122
BstYI RGATCY 1 cut(s) 122
BsuRI GGCC 1 cut(s) 80
CviJI RGCY 3 cut(s) 64, 80, 149
CviKI_1 RGCY 3 cut(s) 64, 80, 149
DdeI CTNAG 1 cut(s) 119
DpnI GATC 2 cut(s) 124, 184
DpnII GATC 2 cut(s) 122, 182
EaeI YGGCCR 1 cut(s) 78
EciI GGCGGA 1 cut(s) 186
Esp3I CGTCTC 1 cut(s) 131
FaiI YATR 1 cut(s) 116
FalI AAGNNNNNCTT 2 cut(s) 53, 85
Fnu4HI GCNGC 1 cut(s) 164
Fsp4HI GCNGC 1 cut(s) 164
GluI GCNGC 1 cut(s) 164
HaeIII GGCC 1 cut(s) 80
HapII CCGG 3 cut(s) 36, 77, 157
HinfI GANTC 1 cut(s) 14
HpaII CCGG 3 cut(s) 36, 77, 157
Hpy166II GTNNAC 1 cut(s) 57
Hpy188I TCNGA 3 cut(s) 13, 19, 127
Hpy8I GTNNAC 1 cut(s) 57
HpyAV CCTTC 2 cut(s) 79, 178
HpyF10VI GCNNNNNNNGC 1 cut(s) 160
HpyF3I CTNAG 1 cut(s) 119
Kzo9I GATC 2 cut(s) 122, 182
LmnI GCTCC 1 cut(s) 159
LpnPI CCDG 5 cut(s) 49, 90, 111, 170, 193
MalI GATC 2 cut(s) 124, 184
MboI GATC 2 cut(s) 122, 182
MfeI CAATTG 1 cut(s) 174
MflI RGATCY 1 cut(s) 122
MhlI GDGCHC 1 cut(s) 156
MluCI AATT 1 cut(s) 174
MlyI GAGTC 1 cut(s) 8
MmeI TCCRAC 1 cut(s) 150
MnlI CCTC 4 cut(s) 34, 75, 136, 204
MspI CCGG 3 cut(s) 36, 77, 157
MunI CAATTG 1 cut(s) 174
MwoI GCNNNNNNNGC 1 cut(s) 160
NdeII GATC 2 cut(s) 122, 182
PkrI GCNGC 1 cut(s) 165
PleI GAGTC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 8
PsuI RGATCY 1 cut(s) 122
SatI GCNGC 1 cut(s) 164
Sau3AI GATC 2 cut(s) 122, 182
SchI GAGTC 1 cut(s) 8
SduI GDGCHC 1 cut(s) 156
SetI ASST 1 cut(s) 26
SmlI CTYRAG 1 cut(s) 25
SmoI CTYRAG 1 cut(s) 25
Sse9I AATT 1 cut(s) 174
SsiI CCGC 2 cut(s) 164, 197
TasI AATT 1 cut(s) 174
TauI GCSGC 1 cut(s) 166
TspDTI ATGAA 2 cut(s) 17, 61
TspGWI ACGGA 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.