AT2G22320

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
9480105 .. 9480440
336 bp
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UTR
Exon/CDS
Intron
AT2G22320.1

Sequence Viewer

Length: 336 bp
ATGGAGGCTTTAGCGATGGCGGGAGTGGATTATCAAGAATGGGGACTTAGTATTGAGGAGTGGGAGCTTCAAGAATCCGTAGTTCCGCTCCATTTGCTTGCTGATGATTTTAAAGAAGAAGAACAAGAAGAAGATCATCAAGACAATGATGATGATGATAGAGTTTTAGATGGCTTAGCGGTTAAACAATCTGTCACTCGTGACATTAGAGCTTCGGTTGGGAAATTTATTGAGCAATCTATGTCACATATGATTGTTCACCTCAAACAGCTTAAGTTCTTAACACTTCTTCTTGAGAACTTTTTGTTTACCCATGTTCTTGATTTTCTTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

111

Amino Acids

12.9

Weight (kDa)

4.3

Isoelectric Point (pI)

50.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 88
AciI CCGC 3 cut(s) 20, 86, 179
AcsI RAATTY 1 cut(s) 224
AflII CTTAAG 1 cut(s) 272
AgsI TTSAA 1 cut(s) 71
AluBI AGCT 3 cut(s) 67, 212, 271
AluI AGCT 3 cut(s) 67, 212, 271
ApoI RAATTY 1 cut(s) 224
AsuHPI GGTGA 1 cut(s) 251
BauI CACGAG 1 cut(s) 198
BccI CCATC 2 cut(s) 10, 164
BfrI CTTAAG 1 cut(s) 272
BlpI GCTNAGC 1 cut(s) 175
Bpu1102I GCTNAGC 1 cut(s) 175
BpuEI CTTGAG 1 cut(s) 314
BseRI GAGGAG 1 cut(s) 71
BslFI GGGAC 1 cut(s) 57
BsmFI GGGAC 1 cut(s) 57
Bsp143I GATC 1 cut(s) 133
Bsp1720I GCTNAGC 1 cut(s) 175
BspACI CCGC 3 cut(s) 20, 86, 179
BspTI CTTAAG 1 cut(s) 272
BsrBI CCGCTC 1 cut(s) 88
BssMI GATC 1 cut(s) 133
BssSI CACGAG 1 cut(s) 198
Bst2BI CACGAG 1 cut(s) 198
BstAFI CTTAAG 1 cut(s) 272
BstC8I GCNNGC 1 cut(s) 99
BstDEI CTNAG 2 cut(s) 47, 175
BstKTI GATC 1 cut(s) 136
BstMBI GATC 1 cut(s) 133
BstMWI GCNNNNNNNGC 1 cut(s) 94
BtgZI GCGATG 1 cut(s) 29
Cac8I GCNNGC 1 cut(s) 99
CviAII CATG 1 cut(s) 314
CviJI RGCY 5 cut(s) 8, 67, 174, 212, 271
CviKI_1 RGCY 5 cut(s) 8, 67, 174, 212, 271
DdeI CTNAG 2 cut(s) 47, 175
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
DraI TTTAAA 1 cut(s) 112
FaeI CATG 1 cut(s) 317
FaiI YATR 4 cut(s) 242, 249, 251, 315
FaqI GGGAC 1 cut(s) 57
FatI CATG 1 cut(s) 313
FauI CCCGC 1 cut(s) 13
FauNDI CATATG 1 cut(s) 249
Hin1II CATG 1 cut(s) 317
HinfI GANTC 1 cut(s) 74
HphI GGTGA 1 cut(s) 251
Hpy166II GTNNAC 2 cut(s) 259, 309
Hpy188III TCNNGA 6 cut(s) 35, 71, 140, 200, 293, 320
Hpy8I GTNNAC 2 cut(s) 259, 309
HpyF10VI GCNNNNNNNGC 1 cut(s) 94
HpyF3I CTNAG 2 cut(s) 47, 175
Hsp92II CATG 1 cut(s) 317
Kzo9I GATC 1 cut(s) 133
LmnI GCTCC 2 cut(s) 64, 93
MaeIII GTNAC 3 cut(s) 193, 200, 243
MalI GATC 1 cut(s) 135
MbiI CCGCTC 1 cut(s) 88
MboI GATC 1 cut(s) 133
MboII GAAGA 5 cut(s) 128, 131, 140, 143, 281
MluCI AATT 1 cut(s) 224
MnlI CCTC 2 cut(s) 49, 272
MseI TTAA 4 cut(s) 111, 183, 273, 281
MspCI CTTAAG 1 cut(s) 272
MwoI GCNNNNNNNGC 1 cut(s) 94
NdeI CATATG 1 cut(s) 249
NdeII GATC 1 cut(s) 133
NlaIII CATG 1 cut(s) 317
NmuCI GTSAC 3 cut(s) 193, 200, 243
PfeI GAWTC 1 cut(s) 74
SaqAI TTAA 4 cut(s) 111, 183, 273, 281
Sau3AI GATC 1 cut(s) 133
SetI ASST 4 cut(s) 69, 214, 264, 273
SmlI CTYRAG 2 cut(s) 272, 293
SmoI CTYRAG 2 cut(s) 272, 293
Sse9I AATT 1 cut(s) 224
SsiI CCGC 3 cut(s) 20, 86, 179
TasI AATT 1 cut(s) 224
TfiI GAWTC 1 cut(s) 74
Tru1I TTAA 4 cut(s) 111, 183, 273, 281
Tru9I TTAA 4 cut(s) 111, 183, 273, 281
TseFI GTSAC 3 cut(s) 193, 200, 243
Tsp45I GTSAC 3 cut(s) 193, 200, 243
TspGWI ACGGA 1 cut(s) 67
Vha464I CTTAAG 1 cut(s) 272
XapI RAATTY 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.