Rh2CG243700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
25545178 .. 25545393
216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG243700.1

Sequence Viewer

Length: 216 bp
ATGTCGATTGAAGCTCTGGCAATGGCAGGTGCAGACTACAATGAATCTGGTATTGATCTTCGAGAGTGGGAGCGGGGCGAAGATCCACCGCCGCCATATATGTTGGTTGATGATGATGGTGATCAGCAAAGTAATGATACTGATCATCACTTCTTCGAATTCAGAGAAAAGAGTAGTACTACTGCTGCTGAAAGAGATGATCTTTATTACATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

8.19

Weight (kDa)

4.05

Isoelectric Point (pI)

52.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 17
AccBSI CCGCTC 1 cut(s) 73
AciI CCGC 3 cut(s) 73, 89, 92
AclWI GGATC 1 cut(s) 77
AcsI RAATTY 1 cut(s) 158
AfaI GTAC 1 cut(s) 178
AflIII ACRYGT 1 cut(s) 210
AgsI TTSAA 1 cut(s) 11
AluBI AGCT 1 cut(s) 14
AluI AGCT 1 cut(s) 14
AlwI GGATC 1 cut(s) 77
ApeKI GCWGC 1 cut(s) 185
ApoI RAATTY 1 cut(s) 158
AsuHPI GGTGA 1 cut(s) 131
AsuII TTCGAA 1 cut(s) 156
BbvI GCAGC 1 cut(s) 172
BccI CCATC 1 cut(s) 110
BclI TGATCA 2 cut(s) 121, 142
BfuAI ACCTGC 1 cut(s) 17
BisI GCNGC 2 cut(s) 92, 186
BlsI GCNGC 2 cut(s) 93, 187
BmcAI AGTACT 1 cut(s) 178
Bpu14I TTCGAA 1 cut(s) 156
BsaBI GATNNNNATC 2 cut(s) 120, 141
Bse3DI GCAATG 1 cut(s) 27
Bse8I GATNNNNATC 2 cut(s) 120, 141
BseJI GATNNNNATC 2 cut(s) 120, 141
BseMI GCAATG 1 cut(s) 27
BseXI GCAGC 1 cut(s) 172
BsgI GTGCAG 1 cut(s) 51
Bsp119I TTCGAA 1 cut(s) 156
Bsp143I GATC 5 cut(s) 55, 82, 121, 142, 199
BspACI CCGC 3 cut(s) 73, 89, 92
BspMI ACCTGC 1 cut(s) 17
BspPI GGATC 1 cut(s) 77
BspT104I TTCGAA 1 cut(s) 156
BsrBI CCGCTC 1 cut(s) 73
BsrDI GCAATG 1 cut(s) 27
BssMI GATC 5 cut(s) 55, 82, 121, 142, 199
BstBI TTCGAA 1 cut(s) 156
BstKTI GATC 5 cut(s) 58, 85, 124, 145, 202
BstMBI GATC 5 cut(s) 55, 82, 121, 142, 199
BstNSI RCATGY 1 cut(s) 214
BstV1I GCAGC 1 cut(s) 172
BstX2I RGATCY 1 cut(s) 82
BstYI RGATCY 1 cut(s) 82
BveI ACCTGC 1 cut(s) 17
Csp6I GTAC 1 cut(s) 177
CviAII CATG 1 cut(s) 211
CviJI RGCY 1 cut(s) 14
CviKI_1 RGCY 1 cut(s) 14
CviQI GTAC 1 cut(s) 177
DpnI GATC 5 cut(s) 57, 84, 123, 144, 201
DpnII GATC 5 cut(s) 55, 82, 121, 142, 199
EcoRI GAATTC 1 cut(s) 158
FaeI CATG 1 cut(s) 214
FaiI YATR 4 cut(s) 97, 99, 101, 212
FatI CATG 1 cut(s) 210
FauI CCCGC 1 cut(s) 66
FbaI TGATCA 2 cut(s) 121, 142
Fnu4HI GCNGC 2 cut(s) 92, 186
Fsp4HI GCNGC 2 cut(s) 92, 186
GluI GCNGC 2 cut(s) 92, 186
Hin1II CATG 1 cut(s) 214
HinfI GANTC 1 cut(s) 44
HphI GGTGA 1 cut(s) 131
Hpy188I TCNGA 1 cut(s) 164
Hpy188III TCNNGA 1 cut(s) 62
HpyCH4V TGCA 1 cut(s) 32
Hsp92II CATG 1 cut(s) 214
Ksp22I TGATCA 2 cut(s) 121, 142
Kzo9I GATC 5 cut(s) 55, 82, 121, 142, 199
LmnI GCTCC 1 cut(s) 70
LpnPI CCDG 3 cut(s) 2, 12, 33
Lsp1109I GCAGC 1 cut(s) 172
MalI GATC 5 cut(s) 57, 84, 123, 144, 201
MbiI CCGCTC 1 cut(s) 73
MboI GATC 5 cut(s) 55, 82, 121, 142, 199
MboII GAAGA 3 cut(s) 50, 92, 145
MflI RGATCY 1 cut(s) 82
MluCI AATT 1 cut(s) 158
NdeII GATC 5 cut(s) 55, 82, 121, 142, 199
NlaIII CATG 1 cut(s) 214
NspI RCATGY 1 cut(s) 214
NspV TTCGAA 1 cut(s) 156
PaqCI CACCTGC 1 cut(s) 17
PciI ACATGT 1 cut(s) 210
PfeI GAWTC 1 cut(s) 44
PkrI GCNGC 2 cut(s) 93, 187
PscI ACATGT 1 cut(s) 210
PsuI RGATCY 1 cut(s) 82
RsaI GTAC 1 cut(s) 178
RsaNI GTAC 1 cut(s) 177
SatI GCNGC 2 cut(s) 92, 186
Sau3AI GATC 5 cut(s) 55, 82, 121, 142, 199
ScaI AGTACT 1 cut(s) 178
SetI ASST 2 cut(s) 16, 31
SfuI TTCGAA 1 cut(s) 156
SgeI CNNG 5 cut(s) 29, 39, 60, 74, 86
Sse9I AATT 1 cut(s) 158
SsiI CCGC 3 cut(s) 73, 89, 92
TaqI TCGA 3 cut(s) 5, 61, 156
TasI AATT 1 cut(s) 158
TatI WGTACW 1 cut(s) 176
TauI GCSGC 1 cut(s) 94
TfiI GAWTC 1 cut(s) 44
TseI GCWGC 1 cut(s) 185
TspDTI ATGAA 1 cut(s) 57
XapI RAATTY 1 cut(s) 158
XceI RCATGY 1 cut(s) 214
ZrmI AGTACT 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.