Rh2AG239600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
26115915 .. 26116193
279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG239600.1

Sequence Viewer

Length: 279 bp
ATGTCGATTGAAGCTCTGGCAATGGCAGGTGCAGACTACAATGAATGTGGTATTGATCTTCGAGAGTGGGAGCGCGGCGAAGATCCACCGCCGCCATATATGTTGGCTGATGATGATGGTGATCAGCAAAGTAATGATACTGATCATCACTTCTTCGAATTCAGAGAAAAGAGTAGCACTACTGCTGCTGAAAGAGATGATCTTTATTACATGAAGATTAAGGTTCTGGAATGGCTAAAGCTGTGTTTCAATCTGAGATTGTGGAACATCACACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

92

Amino Acids

10.81

Weight (kDa)

4.33

Isoelectric Point (pI)

51.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 17
AccII CGCG 1 cut(s) 75
AciI CCGC 3 cut(s) 75, 89, 92
AclWI GGATC 1 cut(s) 77
AcsI RAATTY 1 cut(s) 158
AgsI TTSAA 2 cut(s) 11, 250
AluBI AGCT 2 cut(s) 14, 241
AluI AGCT 2 cut(s) 14, 241
AlwI GGATC 1 cut(s) 77
ApeKI GCWGC 1 cut(s) 185
ApoI RAATTY 1 cut(s) 158
AspLEI GCGC 1 cut(s) 75
AsuHPI GGTGA 1 cut(s) 131
AsuII TTCGAA 1 cut(s) 156
BbvI GCAGC 1 cut(s) 172
BccI CCATC 1 cut(s) 110
BclI TGATCA 2 cut(s) 121, 142
BfuAI ACCTGC 1 cut(s) 17
BisI GCNGC 3 cut(s) 76, 92, 186
BlsI GCNGC 3 cut(s) 77, 93, 187
Bpu14I TTCGAA 1 cut(s) 156
BsaBI GATNNNNATC 2 cut(s) 120, 141
Bse3DI GCAATG 1 cut(s) 27
Bse8I GATNNNNATC 2 cut(s) 120, 141
BseJI GATNNNNATC 2 cut(s) 120, 141
BseMI GCAATG 1 cut(s) 27
BseMII CTCAG 1 cut(s) 245
BseXI GCAGC 1 cut(s) 172
BsgI GTGCAG 1 cut(s) 51
Bsh1236I CGCG 1 cut(s) 75
Bsp119I TTCGAA 1 cut(s) 156
Bsp143I GATC 5 cut(s) 55, 82, 121, 142, 199
BspACI CCGC 3 cut(s) 75, 89, 92
BspCNI CTCAG 1 cut(s) 246
BspFNI CGCG 1 cut(s) 75
BspMI ACCTGC 1 cut(s) 17
BspPI GGATC 1 cut(s) 77
BspT104I TTCGAA 1 cut(s) 156
BsrDI GCAATG 1 cut(s) 27
BssMI GATC 5 cut(s) 55, 82, 121, 142, 199
BstBI TTCGAA 1 cut(s) 156
BstDEI CTNAG 1 cut(s) 254
BstFNI CGCG 1 cut(s) 75
BstHHI GCGC 1 cut(s) 75
BstKTI GATC 5 cut(s) 58, 85, 124, 145, 202
BstMBI GATC 5 cut(s) 55, 82, 121, 142, 199
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 1 cut(s) 172
BstX2I RGATCY 1 cut(s) 82
BstYI RGATCY 1 cut(s) 82
BveI ACCTGC 1 cut(s) 17
CfoI GCGC 1 cut(s) 75
CspCI CAANNNNNGTGG 2 cut(s) 28, 63
CviAII CATG 1 cut(s) 211
CviJI RGCY 4 cut(s) 14, 107, 235, 241
CviKI_1 RGCY 4 cut(s) 14, 107, 235, 241
DdeI CTNAG 1 cut(s) 254
DpnI GATC 5 cut(s) 57, 84, 123, 144, 201
DpnII GATC 5 cut(s) 55, 82, 121, 142, 199
EcoRI GAATTC 1 cut(s) 158
FaeI CATG 1 cut(s) 214
FaiI YATR 4 cut(s) 97, 99, 101, 212
FatI CATG 1 cut(s) 210
FbaI TGATCA 2 cut(s) 121, 142
Fnu4HI GCNGC 3 cut(s) 76, 92, 186
Fsp4HI GCNGC 3 cut(s) 76, 92, 186
GlaI GCGC 1 cut(s) 74
GluI GCNGC 3 cut(s) 76, 92, 186
HhaI GCGC 1 cut(s) 75
Hin1II CATG 1 cut(s) 214
Hin6I GCGC 1 cut(s) 73
HinP1I GCGC 1 cut(s) 73
HphI GGTGA 1 cut(s) 131
Hpy188I TCNGA 2 cut(s) 164, 255
Hpy188III TCNNGA 2 cut(s) 62, 227
HpyCH4V TGCA 1 cut(s) 32
HpyF3I CTNAG 1 cut(s) 254
Hsp92II CATG 1 cut(s) 214
HspAI GCGC 1 cut(s) 73
Ksp22I TGATCA 2 cut(s) 121, 142
Kzo9I GATC 5 cut(s) 55, 82, 121, 142, 199
LmnI GCTCC 1 cut(s) 70
LpnPI CCDG 3 cut(s) 2, 12, 212
Lsp1109I GCAGC 1 cut(s) 172
MalI GATC 5 cut(s) 57, 84, 123, 144, 201
MboI GATC 5 cut(s) 55, 82, 121, 142, 199
MboII GAAGA 4 cut(s) 50, 92, 145, 226
MflI RGATCY 1 cut(s) 82
MluCI AATT 1 cut(s) 158
MseI TTAA 2 cut(s) 219, 277
MvnI CGCG 1 cut(s) 75
NdeII GATC 5 cut(s) 55, 82, 121, 142, 199
NlaIII CATG 1 cut(s) 214
NspV TTCGAA 1 cut(s) 156
PaqCI CACCTGC 1 cut(s) 17
PkrI GCNGC 3 cut(s) 77, 93, 187
PsuI RGATCY 1 cut(s) 82
SaqAI TTAA 2 cut(s) 219, 277
SatI GCNGC 3 cut(s) 76, 92, 186
Sau3AI GATC 5 cut(s) 55, 82, 121, 142, 199
SetI ASST 4 cut(s) 16, 31, 225, 243
SfuI TTCGAA 1 cut(s) 156
SgeI CNNG 6 cut(s) 29, 39, 74, 86, 223, 239
Sse9I AATT 1 cut(s) 158
SsiI CCGC 3 cut(s) 75, 89, 92
TaqI TCGA 3 cut(s) 5, 61, 156
TasI AATT 1 cut(s) 158
TauI GCSGC 2 cut(s) 78, 94
Tru1I TTAA 2 cut(s) 219, 277
Tru9I TTAA 2 cut(s) 219, 277
TseI GCWGC 1 cut(s) 185
TspDTI ATGAA 2 cut(s) 57, 227
XapI RAATTY 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.