Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004042

Physical Location & Seq

Genomic Coordinates Reverse (-)

9812771 .. 9814738

Gene Structure 1968 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G23060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1242 bp

ATGACGGTGCTTGTGGAGGTTAGAGAATACGACCCAAGTAAAGACTTAGCCACTGTAGAAGATGTTGAACGGCGGTGCGAAGTTGGCCCAGCCGGAAAACTTTCTCTCTTCACCGATCTCTTAGGTGACCCTATTTGCCGTGTCCGACATTCACCTTCTTACCTCATGCTGGTGGCTGAGATTGGTCCGAAAGAGAAGAAAGAGTTAGTTGGAATGATTCGGGGATGTATCAAAACCGTTACATGTGGTATCACCACCAAAAGACTTGATTTAACTCATAACAAATCCCAAAACGATGTCGTTATTACCAAACCACTTTACACTAAACTCGCTTACATTTTGGGTCTCCGCGTTTCTCCTACACACCGGAGACAAGGGATAGGGTTTAAGCTCGTGAAGGCTATGGAAGATTGGTTTAGTCAAAACGGGGCTGAATATTCCTATTTTGCAACTGAAAACGACAATCACGCTTCCGTCAATCTTTTCACCGGAAAATGTGGTTACGCCGAGTTTCGTACACCGTCTATTTTGGTTAACCCGGTTTACGCACACCGGGTCAACATTTCTCGTCGGGTTACCGTAATTAAGCTTGAACCGTCTGATGCTGAGTTACTATACCGGCTTCGGTTTAGCACAACCGAGTTTTTCCCTCGCGACATTGACTCTGTTTTGAATAACAAACTCTCGTTAGGAACATTCGTCGCGGTTCCACGTGGCAGTTGTTACGGATCCGGGTCTAGGTCATGGCCCGGTTCGGCTAAGTTCTTGGAGTATCCACCGGACTCGTGGGCGGTTTTAAGCGTGTGGAATTGTAAAGACTCGTTTAGATTAGAAGTTCGCGGCGCGTCGAGATTGAGGCGCGTGGTTTCAAAAGCGACGCGCATGGTTGATAAAACTCTACCGTTTTTGAAAATACCGTCGATCCCGGCGGTTTTCCGGCCGTTTGGGCTGCATTTTATGTACGGAATCGGCGGAGAAGGACCACGCGCGGAGAAAATGGTGAAGGCATTGTGTGACCATGCACATAATTTGGCAAAGGAAGGAGGATGCGGCGTGGTGGCGGCAGAAGTCGCCGGCGAAGAGCCGCTCCGGCGAGGGATACCGCATTGGAAAGTGCTATCGTGCGCTGAGGATTTGTGGTGTATTAAACGGCTTGGAGAAGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAATCGCCACCTGGCGATTCTATTTTTGTTGACCCTAGAGAATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0006464 GO:0006473 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009826 GO:0009987 GO:0010033 GO:0016043 GO:0016049 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060560 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

413

Amino Acids

46.11

Weight (kDa)

8.92

Isoelectric Point (pI)

40.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	55 - 168	3.1e-14	Acetyltransferase (GNAT) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004042)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23060 AT2G23060 AT4G37580 AT4G37580 AT5G67430 AT5G67430
fragaria_vesca	FvH4_1g17420 FvH4_2g04100
malus_domestica	MD02G1183200.v1.1 MD15G1295100.v1.1
prunus_persica	Prupe.6G222600_v2.0.a1 Prupe.8G142200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0107611 RchiOBHm_Chr6g0253471
rosa_laevigata	RLG00000015017 RLG00000017595
rosa_multiflora	Rmu_co8105006.1_g000001 Rmu_sc0000800.1_g000038 Rmu_sc0042258.1_g000001 Rmu_ssc0000079.1_g000009
rosa_roxburghii	Rroxscaffold_2G00136150 Rroxscaffold_7G00211870
rosa_rugosa	Rorug02G0146000 Rorug05G0544500
rosa_samantha	Rh2AG195300 Rh2BG207900 Rh2CG200500 Rh2DG203000 Rh6AG059500 Rh6BG053500 Rh6CG050600 Rh6DG047300
rosa_wichuraiana	Rw2G015480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1087
AccII	CGCG	9 cut(s)	351, 654, 704, 840, 845, 861, 880, 987, 989
AclWI	GGATC	3 cut(s)	723, 736, 916
AcoI	YGGCCR	1 cut(s)	938
AcsI	RAATTY	1 cut(s)	1235
AcvI	CACGTG	1 cut(s)	713
AfaI	GTAC	2 cut(s)	517, 962
AfiI	CCNNNNNNNGG	2 cut(s)	169, 738
AflIII	ACRYGT	1 cut(s)	242
AgsI	TTSAA	5 cut(s)	68, 593, 673, 870, 910
AjnI	CCWGG	1 cut(s)	1204
AluBI	AGCT	2 cut(s)	391, 589
AluI	AGCT	2 cut(s)	391, 589
Alw26I	GTCTC	2 cut(s)	350, 364
AlwI	GGATC	3 cut(s)	723, 736, 916
AoxI	GGCC	3 cut(s)	85, 746, 938
ApeKI	GCWGC	1 cut(s)	949
ApoI	RAATTY	1 cut(s)	1235
Asp700I	GAANNNNTTC	1 cut(s)	100
AspLEI	GCGC	5 cut(s)	845, 861, 882, 989, 1127
AspS9I	GGNCC	4 cut(s)	86, 185, 747, 980
AsuC2I	CCSGG	5 cut(s)	539, 554, 733, 750, 926
AsuHPI	GGTGA	7 cut(s)	103, 137, 144, 244, 478, 1012, 1196
AvaII	GGWCC	2 cut(s)	185, 980
BamHI	GGATCC	1 cut(s)	728
BauI	CACGAG	2 cut(s)	392, 784
BbrPI	CACGTG	1 cut(s)	713
BbvCI	CCTCAGC	1 cut(s)	1128
BbvI	GCAGC	1 cut(s)	936
BccI	CCATC	1 cut(s)	1166
BceAI	ACGGC	4 cut(s)	86, 123, 925, 1166
BciT130I	CCWGG	1 cut(s)	1206
BciVI	GTATCC	2 cut(s)	783, 1092
BcnI	CCSGG	5 cut(s)	539, 554, 733, 750, 926
BcoDI	GTCTC	2 cut(s)	350, 364
BfaI	CTAG	2 cut(s)	738, 1230
BfmI	CTRYAG	1 cut(s)	54
BfuI	GTATCC	2 cut(s)	783, 1092
BglI	GCCNNNNNGGC	2 cut(s)	946, 1090
BisI	GCNGC	5 cut(s)	841, 950, 1051, 1062, 1085
BlsI	GCNGC	5 cut(s)	842, 951, 1052, 1063, 1086
Bme1390I	CCNGG	6 cut(s)	539, 554, 733, 750, 926, 1206
Bme18I	GGWCC	2 cut(s)	185, 980
BmgT120I	GGNCC	4 cut(s)	86, 185, 747, 980
BmiI	GGNNCC	2 cut(s)	708, 730
BmrFI	CCNGG	6 cut(s)	539, 554, 733, 750, 926, 1206
BmsI	GCATC	2 cut(s)	592, 1037
Bpu10I	CCTNAGC	1 cut(s)	1128
BpuMI	CCSGG	5 cut(s)	539, 554, 733, 750, 926
BsaAI	YACGTR	1 cut(s)	713
BsaI	GGTCTC	1 cut(s)	350
BsaWI	WCCGGW	3 cut(s)	366, 488, 778
Bsc4I	CCNNNNNNNGG	2 cut(s)	169, 738
Bse118I	RCCGGY	2 cut(s)	618, 1073
BseBI	CCWGG	1 cut(s)	1206
BseGI	GGATG	2 cut(s)	230, 1052
BseLI	CCNNNNNNNGG	2 cut(s)	169, 738
BseMII	CTCAG	3 cut(s)	168, 597, 1119
BseX3I	CGGCCG	1 cut(s)	938
BseXI	GCAGC	1 cut(s)	936
BseYI	CCCAGC	1 cut(s)	88
Bsh1236I	CGCG	9 cut(s)	351, 654, 704, 840, 845, 861, 880, 987, 989
Bsh1285I	CGRYCG	1 cut(s)	941
BshFI	GGCC	3 cut(s)	87, 748, 940
BsiEI	CGRYCG	1 cut(s)	941
BslI	CCNNNNNNNGG	2 cut(s)	169, 738
BsmAI	GTCTC	2 cut(s)	350, 364
BsnI	GGCC	3 cut(s)	87, 748, 940
Bso31I	GGTCTC	1 cut(s)	350
Bsp143I	GATC	3 cut(s)	115, 728, 921
Bsp68I	TCGCGA	1 cut(s)	654
BspANI	GGCC	3 cut(s)	87, 748, 940
BspCNI	CTCAG	3 cut(s)	169, 598, 1120
BspFNI	CGCG	9 cut(s)	351, 654, 704, 840, 845, 861, 880, 987, 989
BspLI	GGNNCC	2 cut(s)	708, 730
BspPI	GGATC	3 cut(s)	723, 736, 916
BspQI	GCTCTTC	1 cut(s)	1074
BspTNI	GGTCTC	1 cut(s)	350
BsrBI	CCGCTC	1 cut(s)	1087
BsrFI	RCCGGY	2 cut(s)	618, 1073
BssAI	RCCGGY	2 cut(s)	618, 1073
BssMI	GATC	3 cut(s)	115, 728, 921
BssSI	CACGAG	2 cut(s)	392, 784
Bst2BI	CACGAG	2 cut(s)	392, 784
Bst2UI	CCWGG	1 cut(s)	1206
Bst4CI	ACNGT	8 cut(s)	7, 55, 238, 522, 580, 597, 903, 918
Bst6I	CTCTTC	2 cut(s)	113, 1074
BstBAI	YACGTR	1 cut(s)	713
BstC8I	GCNNGC	1 cut(s)	1075
BstDEI	CTNAG	6 cut(s)	46, 121, 177, 606, 759, 1128
BstEII	GGTNACC	2 cut(s)	125, 574
BstF5I	GGATG	2 cut(s)	230, 1052
BstFNI	CGCG	9 cut(s)	351, 654, 704, 840, 845, 861, 880, 987, 989
BstHHI	GCGC	5 cut(s)	845, 861, 882, 989, 1127
BstKTI	GATC	3 cut(s)	118, 731, 924
BstMAI	GTCTC	2 cut(s)	350, 364
BstMBI	GATC	3 cut(s)	115, 728, 921
BstMCI	CGRYCG	1 cut(s)	941
BstMWI	GCNNNNNNNGC	4 cut(s)	84, 946, 1070, 1090
BstNI	CCWGG	1 cut(s)	1206
BstNSI	RCATGY	1 cut(s)	246
BstPI	GGTNACC	2 cut(s)	125, 574
BstSCI	CCNGG	6 cut(s)	537, 552, 731, 748, 924, 1204
BstSFI	CTRYAG	1 cut(s)	54
BstUI	CGCG	9 cut(s)	351, 654, 704, 840, 845, 861, 880, 987, 989
BstV1I	GCAGC	1 cut(s)	936
BstX2I	RGATCY	1 cut(s)	728
BstYI	RGATCY	1 cut(s)	728
BstZI	CGGCCG	1 cut(s)	938
BsuI	GTATCC	2 cut(s)	783, 1092
BsuRI	GGCC	3 cut(s)	87, 748, 940
BtsCI	GGATG	2 cut(s)	230, 1052
BtsIMutI	CAGTG	1 cut(s)	51
BtuMI	TCGCGA	1 cut(s)	654
Cac8I	GCNNGC	1 cut(s)	1075
CfoI	GCGC	5 cut(s)	845, 861, 882, 989, 1127
Cfr10I	RCCGGY	2 cut(s)	618, 1073
Cfr13I	GGNCC	4 cut(s)	86, 185, 747, 980
CseI	GACGC	2 cut(s)	834, 886
Csp6I	GTAC	2 cut(s)	516, 961
CviAII	CATG	5 cut(s)	166, 243, 744, 883, 1019
CviQI	GTAC	2 cut(s)	516, 961
DdeI	CTNAG	6 cut(s)	46, 121, 177, 606, 759, 1128
DpnI	GATC	3 cut(s)	117, 730, 923
DpnII	GATC	3 cut(s)	115, 728, 921
EaeI	YGGCCR	1 cut(s)	938
EagI	CGGCCG	1 cut(s)	938
Eam1104I	CTCTTC	2 cut(s)	113, 1074
EarI	CTCTTC	2 cut(s)	113, 1074
EciI	GGCGGA	1 cut(s)	987
EclXI	CGGCCG	1 cut(s)	938
Eco31I	GGTCTC	1 cut(s)	350
Eco47I	GGWCC	2 cut(s)	185, 980
Eco52I	CGGCCG	1 cut(s)	938
Eco72I	CACGTG	1 cut(s)	713
Eco91I	GGTNACC	2 cut(s)	125, 574
EcoO65I	GGTNACC	2 cut(s)	125, 574
EcoRII	CCWGG	1 cut(s)	1204
FaeI	CATG	5 cut(s)	169, 246, 747, 886, 1022
FatI	CATG	5 cut(s)	165, 242, 743, 882, 1018
Fnu4HI	GCNGC	5 cut(s)	841, 950, 1051, 1062, 1085
FokI	GGATG	2 cut(s)	237, 1059
Fsp4HI	GCNGC	5 cut(s)	841, 950, 1051, 1062, 1085
FspBI	CTAG	2 cut(s)	738, 1230
GlaI	GCGC	5 cut(s)	844, 860, 881, 988, 1126
GluI	GCNGC	5 cut(s)	841, 950, 1051, 1062, 1085
GsaI	CCCAGC	1 cut(s)	92
HaeIII	GGCC	3 cut(s)	87, 748, 940
HgaI	GACGC	2 cut(s)	834, 886
HhaI	GCGC	5 cut(s)	845, 861, 882, 989, 1127
Hin1II	CATG	5 cut(s)	169, 246, 747, 886, 1022
Hin6I	GCGC	5 cut(s)	843, 859, 880, 987, 1125
HinP1I	GCGC	5 cut(s)	843, 859, 880, 987, 1125
HincII	GTYRAC	3 cut(s)	535, 559, 1225
HindII	GTYRAC	3 cut(s)	535, 559, 1225
HindIII	AAGCTT	1 cut(s)	587
HinfI	GANTC	6 cut(s)	217, 662, 782, 818, 966, 1211
HpaI	GTTAAC	1 cut(s)	535
HphI	GGTGA	7 cut(s)	103, 137, 144, 244, 478, 1012, 1196
Hpy166II	GTNNAC	5 cut(s)	518, 535, 544, 559, 1225
Hpy188I	TCNGA	3 cut(s)	146, 189, 601
Hpy188III	TCNNGA	3 cut(s)	394, 653, 849
Hpy8I	GTNNAC	5 cut(s)	518, 535, 544, 559, 1225
Hpy99I	CGWCG	5 cut(s)	573, 704, 850, 880, 922
HpyAV	CCTTC	5 cut(s)	165, 391, 971, 997, 1034
HpyCH4III	ACNGT	8 cut(s)	7, 55, 238, 522, 580, 597, 903, 918
HpyCH4IV	ACGT	1 cut(s)	712
HpyCH4V	TGCA	3 cut(s)	449, 952, 1022
HpyF10VI	GCNNNNNNNGC	4 cut(s)	84, 946, 1070, 1090
HpyF3I	CTNAG	6 cut(s)	46, 121, 177, 606, 759, 1128
HpySE526I	ACGT	1 cut(s)	712
Hsp92II	CATG	5 cut(s)	169, 246, 747, 886, 1022
HspAI	GCGC	5 cut(s)	843, 859, 880, 987, 1125
KroI	GCCGGC	1 cut(s)	1073
KroNI	GCCGGC	1 cut(s)	1075
KspAI	GTTAAC	1 cut(s)	535
Kzo9I	GATC	3 cut(s)	115, 728, 921
LguI	GCTCTTC	1 cut(s)	1074
LmnI	GCTCC	1 cut(s)	1092
Lsp1109I	GCAGC	1 cut(s)	936
LweI	GCATC	2 cut(s)	592, 1037
MaeI	CTAG	2 cut(s)	738, 1230
MaeII	ACGT	1 cut(s)	712
MaeIII	GTNAC	7 cut(s)	125, 238, 500, 574, 609, 722, 1013
MalI	GATC	3 cut(s)	117, 730, 923
MbiI	CCGCTC	1 cut(s)	1087
MboI	GATC	3 cut(s)	115, 728, 921
MboII	GAAGA	6 cut(s)	71, 100, 208, 419, 1091, 1172
MflI	RGATCY	1 cut(s)	728
MluCI	AATT	4 cut(s)	582, 808, 1027, 1235
MlyI	GAGTC	3 cut(s)	656, 776, 812
MmeI	TCCRAC	2 cut(s)	169, 190
MnlI	CCTC	7 cut(s)	10, 173, 660, 849, 1037, 1088, 1123
MreI	CGCCGGCG	1 cut(s)	1073
MroNI	GCCGGC	1 cut(s)	1073
MroXI	GAANNNNTTC	1 cut(s)	100
MseI	TTAA	6 cut(s)	272, 387, 534, 585, 797, 1146
MslI	CAYNNNNRTG	1 cut(s)	170
MspR9I	CCNGG	6 cut(s)	539, 554, 733, 750, 926, 1206
MvaI	CCWGG	1 cut(s)	1206
MvnI	CGCG	9 cut(s)	351, 654, 704, 840, 845, 861, 880, 987, 989
MwoI	GCNNNNNNNGC	4 cut(s)	84, 946, 1070, 1090
NaeI	GCCGGC	1 cut(s)	1075
NciI	CCSGG	5 cut(s)	539, 554, 733, 750, 926
NdeII	GATC	3 cut(s)	115, 728, 921
NgoMIV	GCCGGC	1 cut(s)	1073
NlaIII	CATG	5 cut(s)	169, 246, 747, 886, 1022
NlaIV	GGNNCC	2 cut(s)	708, 730
NmeAIII	GCCGAG	1 cut(s)	532
NmuCI	GTSAC	2 cut(s)	125, 1013
NruI	TCGCGA	1 cut(s)	654
NspI	RCATGY	1 cut(s)	246
PciI	ACATGT	1 cut(s)	242
PciSI	GCTCTTC	1 cut(s)	1074
PdiI	GCCGGC	1 cut(s)	1075
PdmI	GAANNNNTTC	1 cut(s)	100
PfeI	GAWTC	3 cut(s)	217, 966, 1211
PkrI	GCNGC	5 cut(s)	842, 951, 1052, 1063, 1086
PleI	GAGTC	3 cut(s)	656, 776, 812
PmaCI	CACGTG	1 cut(s)	713
PmlI	CACGTG	1 cut(s)	713
PpsI	GAGTC	3 cut(s)	656, 776, 812
Ppu21I	YACGTR	1 cut(s)	713
PscI	ACATGT	1 cut(s)	242
Psp6I	CCWGG	1 cut(s)	1204
PspCI	CACGTG	1 cut(s)	713
PspEI	GGTNACC	2 cut(s)	125, 574
PspFI	CCCAGC	1 cut(s)	88
PspGI	CCWGG	1 cut(s)	1204
PspN4I	GGNNCC	2 cut(s)	708, 730
PspPI	GGNCC	4 cut(s)	86, 185, 747, 980
PsuI	RGATCY	1 cut(s)	728
RruI	TCGCGA	1 cut(s)	654
RsaI	GTAC	2 cut(s)	517, 962
RsaNI	GTAC	2 cut(s)	516, 961
RseI	CAYNNNNRTG	1 cut(s)	170
SapI	GCTCTTC	1 cut(s)	1074
SaqAI	TTAA	6 cut(s)	272, 387, 534, 585, 797, 1146
SatI	GCNGC	5 cut(s)	841, 950, 1051, 1062, 1085
Sau3AI	GATC	3 cut(s)	115, 728, 921
Sau96I	GGNCC	4 cut(s)	86, 185, 747, 980
SchI	GAGTC	3 cut(s)	656, 776, 812
ScrFI	CCNGG	6 cut(s)	539, 554, 733, 750, 926, 1206
SetI	ASST	9 cut(s)	21, 127, 157, 165, 393, 591, 715, 743, 1207
SfaNI	GCATC	2 cut(s)	592, 1037
SfcI	CTRYAG	1 cut(s)	54
SgrAI	CRCCGGYG	1 cut(s)	1073
SinI	GGWCC	2 cut(s)	185, 980
SmiMI	CAYNNNNRTG	1 cut(s)	170
Sse9I	AATT	4 cut(s)	582, 808, 1027, 1235
SspI	AATATT	1 cut(s)	437
SspMI	CTAG	2 cut(s)	738, 1230
StyD4I	CCNGG	6 cut(s)	537, 552, 731, 748, 924, 1204
TaaI	ACNGT	8 cut(s)	7, 55, 238, 522, 580, 597, 903, 918
TaiI	ACGT	1 cut(s)	715
TaqI	TCGA	2 cut(s)	848, 920
TasI	AATT	4 cut(s)	582, 808, 1027, 1235
TauI	GCSGC	4 cut(s)	843, 1053, 1064, 1087
TfiI	GAWTC	3 cut(s)	217, 966, 1211
Tru1I	TTAA	6 cut(s)	272, 387, 534, 585, 797, 1146
Tru9I	TTAA	6 cut(s)	272, 387, 534, 585, 797, 1146
TscAI	CASTG	1 cut(s)	58
TseFI	GTSAC	2 cut(s)	125, 1013
TseI	GCWGC	1 cut(s)	949
Tsp45I	GTSAC	2 cut(s)	125, 1013
TspGWI	ACGGA	3 cut(s)	463, 741, 978
TspRI	CASTG	1 cut(s)	58
VpaK11BI	GGWCC	2 cut(s)	185, 980
XapI	RAATTY	1 cut(s)	1235
XceI	RCATGY	1 cut(s)	246
XcmI	CCANNNNNNNNNTGG	1 cut(s)	783
XmnI	GAANNNNTTC	1 cut(s)	100
XspI	CTAG	2 cut(s)	738, 1230

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.