Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004042

Physical Location & Seq

Genomic Coordinates Forward (+)

15950259 .. 15952060

Gene Structure 1802 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G142200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGGTTATTATGGGAGAGGCAGGGGAAAGCTTGTTGGTGATTAGAGAGTTGGACATGAACAAGGACACAGAAAGTGTGGAAGAGTTAGAGAGGAAGTGTGAAGTTGGTGGTTCTTCATCTGGCAAAATGTCTCTCTTTACTGATCTTTTGGGTGACCCAATTTGCAGGATTCGAAACTCACCCTCCTTCCTCATGCTGGTGGCTGAAATGGGTCCTGGCAAAGAAATCGTTGGAGTCATTAGGGGTTGCATCAAGATCGTTACTTGTGGCAAAAAGCTCATAAGAAGTACCAATGGAATTGCAAACTCTAGCAATGAAGATTCTGATCCCAAACTCGAACCCATTTGCACCAAACTCGCTTATATTCTCGGCTTACGAGTTTCTCCTTCACACAGGCGTAGAGGTATTGGATTGAAGCTTGTTAATCAAATGGAGGAATGGTTTAGAAGAAATGGAGCAGAGTATTCATACATGGCAACTGAAAATGACAACATGCCTTCCCTCAACCTCTTCACTAAAAAATGCCACTACACCAAGTTTCGTACCCCTTCAATTTTGGTCCAACCAGTATTTGCTCACCGAGTCAAAACTCACAATCGAGTCACCATCATCAAACTCAGCCCTCCAGACGCCGAGGCCCTCTACCGCTCCCGATTCTGCACCACCGAGTTTTTCCCACAGGACATTGATAGGGTTGTGAAAAACAAGCTCAATCTTGGCACGTTTTTGGCCGTCCCAACTGGATTTTCGTGGCCCGGTTTGGTCAAGTTTCTGTCTGAACCGCCAGAGTCATGGGCAGTTTTAAGTGCATGGAATTGTAAGGAGGTGTTTACTTTGGAAATCAAAGGCGCGTCGCTTGCACGGCGTTTTGCGGCGAAGGCCACGCGCGTGGTGGACAGGGCATTGCCTTGGCTGAGGATCCCTTCGGTACCTGAGGTTTTTAGGCCTTTTGGGTTGGTTTTTCTCTATGGTTTGGGAGGACAAGGCCCACGCGCGGTTAAGATGGTGGAAGCGCTTTGTGGCCACGCACATAACATGGCTAGGGAATTGGGTTGTGGGGTGGTGGCGACTGAGGTGGCAAGTCAAGAACCGTTGAGGTTAGGAATACCACACTGGAAGACACTATCATGCGCCGAGGATATGTGGTGCATCAAGAGACTACTGCAGGATTATAGTGATGGGCCTATTGGAGACTGGACCAAATCTCCTCCTGGGCTTTCAATTTTTGTTGATCCAAGAGAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

416

Amino Acids

46.31

Weight (kDa)

8.93

Isoelectric Point (pI)

48.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004042)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23060 AT2G23060 AT4G37580 AT4G37580 AT5G67430 AT5G67430
fragaria_vesca	FvH4_1g17420 FvH4_2g04100
malus_domestica	MD02G1183200.v1.1 MD15G1295100.v1.1
prunus_persica	Prupe.6G222600_v2.0.a1 Prupe.8G142200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0107611 RchiOBHm_Chr6g0253471
rosa_laevigata	RLG00000015017 RLG00000017595
rosa_multiflora	Rmu_co8105006.1_g000001 Rmu_sc0000800.1_g000038 Rmu_sc0042258.1_g000001 Rmu_ssc0000079.1_g000009
rosa_roxburghii	Rroxscaffold_2G00136150 Rroxscaffold_7G00211870
rosa_rugosa	Rorug02G0146000 Rorug05G0544500
rosa_samantha	Rh2AG195300 Rh2BG207900 Rh2CG200500 Rh2DG203000 Rh6AG059500 Rh6BG053500 Rh6CG050600 Rh6DG047300
rosa_wichuraiana	Rw2G015480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	928
AccB1I	GGYRCC	1 cut(s)	928
AccBSI	CCGCTC	1 cut(s)	648
AccII	CGCG	5 cut(s)	851, 886, 888, 993, 995
AciI	CCGC	4 cut(s)	646, 782, 872, 995
AclWI	GGATC	4 cut(s)	320, 913, 926, 1226
AcoI	YGGCCR	2 cut(s)	729, 1021
AcyI	GRCGYC	1 cut(s)	630
AfaI	GTAC	3 cut(s)	289, 544, 930
AfeI	AGCGCT	1 cut(s)	1014
AfiI	CCNNNNNNNGG	2 cut(s)	196, 994
AgsI	TTSAA	3 cut(s)	415, 552, 1221
AjnI	CCWGG	2 cut(s)	214, 1210
AjuI	GAANNNNNNNTTGG	2 cut(s)	730, 762
AleI	CACNNNNGTG	1 cut(s)	887
AluBI	AGCT	4 cut(s)	30, 277, 418, 709
AluI	AGCT	4 cut(s)	30, 277, 418, 709
Alw26I	GTCTC	3 cut(s)	135, 1150, 1185
AlwI	GGATC	4 cut(s)	320, 913, 926, 1226
Aor51HI	AGCGCT	1 cut(s)	1014
AoxI	GGCC	8 cut(s)	636, 729, 752, 879, 944, 985, 1021, 1181
Asp718I	GGTACC	1 cut(s)	928
AspLEI	GCGC	5 cut(s)	851, 888, 995, 1015, 1133
AspS9I	GGNCC	7 cut(s)	212, 559, 637, 753, 986, 1181, 1197
AsuC2I	CCSGG	1 cut(s)	756
AsuHPI	GGTGA	5 cut(s)	49, 164, 171, 569, 595
AsuII	TTCGAA	1 cut(s)	172
AvaII	GGWCC	3 cut(s)	212, 559, 1197
AxyI	CCTNAGG	1 cut(s)	933
BalI	TGGCCA	1 cut(s)	1023
BamHI	GGATCC	1 cut(s)	918
BanI	GGYRCC	1 cut(s)	928
BbsI	GAAGAC	1 cut(s)	1124
BbvCI	CCTCAGC	1 cut(s)	914
BccI	CCATC	3 cut(s)	614, 997, 1172
BceAI	ACGGC	2 cut(s)	716, 878
BcgI	CGANNNNNNTGC	6 cut(s)	208, 238, 242, 272, 337, 371
BciT130I	CCWGG	2 cut(s)	216, 1212
BcnI	CCSGG	1 cut(s)	756
BcoDI	GTCTC	3 cut(s)	135, 1150, 1185
BfaI	CTAG	2 cut(s)	309, 1041
BfmI	CTRYAG	1 cut(s)	1163
BfoI	RGCGCY	1 cut(s)	1016
BisI	GCNGC	1 cut(s)	873
BlsI	GCNGC	1 cut(s)	874
Bme1390I	CCNGG	3 cut(s)	216, 756, 1212
Bme18I	GGWCC	3 cut(s)	212, 559, 1197
BmgT120I	GGNCC	7 cut(s)	212, 559, 637, 753, 986, 1181, 1197
BmiI	GGNNCC	3 cut(s)	213, 920, 930
BmrFI	CCNGG	3 cut(s)	216, 756, 1212
BmsI	GCATC	2 cut(s)	258, 1158
BpiI	GAAGAC	1 cut(s)	1124
BpmI	CTGGAG	1 cut(s)	609
Bpu10I	CCTNAGC	1 cut(s)	914
Bpu14I	TTCGAA	1 cut(s)	172
BpuMI	CCSGG	1 cut(s)	756
BsaBI	GATNNNNATC	1 cut(s)	324
BsaHI	GRCGYC	1 cut(s)	630
BsaJI	CCNNGG	4 cut(s)	633, 908, 1134, 1211
BsaXI	ACNNNNNCTCC	6 cut(s)	167, 197, 425, 455, 1189, 1219
Bsc4I	CCNNNNNNNGG	2 cut(s)	196, 994
Bse1I	ACTGG	4 cut(s)	566, 745, 1118, 1199
Bse21I	CCTNAGG	1 cut(s)	933
Bse3DI	GCAATG	2 cut(s)	319, 902
Bse8I	GATNNNNATC	1 cut(s)	324
BseBI	CCWGG	2 cut(s)	216, 1212
BseDI	CCNNGG	4 cut(s)	633, 908, 1134, 1211
BseJI	GATNNNNATC	1 cut(s)	324
BseLI	CCNNNNNNNGG	2 cut(s)	196, 994
BseMI	GCAATG	2 cut(s)	319, 902
BseMII	CTCAG	4 cut(s)	631, 905, 924, 1062
BseNI	ACTGG	4 cut(s)	566, 745, 1118, 1199
BseRI	GAGGAG	1 cut(s)	1197
BsgI	GTGCAG	1 cut(s)	643
Bsh1236I	CGCG	5 cut(s)	851, 886, 888, 993, 995
BshFI	GGCC	8 cut(s)	638, 731, 754, 881, 946, 987, 1023, 1183
BshNI	GGYRCC	1 cut(s)	928
BsiSI	CCGG	1 cut(s)	756
BslFI	GGGAC	1 cut(s)	719
BslI	CCNNNNNNNGG	2 cut(s)	196, 994
BsmAI	GTCTC	3 cut(s)	135, 1150, 1185
BsmFI	GGGAC	1 cut(s)	719
BsnI	GGCC	8 cut(s)	638, 731, 754, 881, 946, 987, 1023, 1183
Bsp119I	TTCGAA	1 cut(s)	172
Bsp143I	GATC	5 cut(s)	142, 255, 325, 918, 1231
BspACI	CCGC	4 cut(s)	646, 782, 872, 995
BspANI	GGCC	8 cut(s)	638, 731, 754, 881, 946, 987, 1023, 1183
BspCNI	CTCAG	4 cut(s)	630, 906, 925, 1063
BspFNI	CGCG	5 cut(s)	851, 886, 888, 993, 995
BspLI	GGNNCC	3 cut(s)	213, 920, 930
BspMAI	CTGCAG	1 cut(s)	1167
BspPI	GGATC	4 cut(s)	320, 913, 926, 1226
BspT104I	TTCGAA	1 cut(s)	172
BspT107I	GGYRCC	1 cut(s)	928
BsrBI	CCGCTC	1 cut(s)	648
BsrDI	GCAATG	2 cut(s)	319, 902
BsrI	ACTGG	4 cut(s)	566, 745, 1118, 1199
BssECI	CCNNGG	4 cut(s)	633, 908, 1134, 1211
BssMI	GATC	5 cut(s)	142, 255, 325, 918, 1231
BssNI	GRCGYC	1 cut(s)	630
BssT1I	CCWWGG	1 cut(s)	908
Bst2UI	CCWGG	2 cut(s)	216, 1212
Bst4CI	ACNGT	1 cut(s)	1092
Bst6I	CTCTTC	2 cut(s)	75, 515
BstACI	GRCGYC	1 cut(s)	630
BstBI	TTCGAA	1 cut(s)	172
BstC8I	GCNNGC	1 cut(s)	858
BstDEI	CTNAG	4 cut(s)	617, 914, 933, 1071
BstEII	GGTNACC	1 cut(s)	152
BstFNI	CGCG	5 cut(s)	851, 886, 888, 993, 995
BstH2I	RGCGCY	1 cut(s)	1016
BstHHI	GCGC	5 cut(s)	851, 888, 995, 1015, 1133
BstKTI	GATC	5 cut(s)	145, 258, 328, 921, 1234
BstMAI	GTCTC	3 cut(s)	135, 1150, 1185
BstMBI	GATC	5 cut(s)	142, 255, 325, 918, 1231
BstMWI	GCNNNNNNNGC	3 cut(s)	857, 862, 878
BstNI	CCWGG	2 cut(s)	216, 1212
BstNSI	RCATGY	1 cut(s)	496
BstPI	GGTNACC	1 cut(s)	152
BstSCI	CCNGG	3 cut(s)	214, 754, 1210
BstSFI	CTRYAG	1 cut(s)	1163
BstUI	CGCG	5 cut(s)	851, 886, 888, 993, 995
BstV2I	GAAGAC	1 cut(s)	1124
BstX2I	RGATCY	1 cut(s)	918
BstXI	CCANNNNNNTGG	2 cut(s)	792, 889
BstYI	RGATCY	1 cut(s)	918
Bsu36I	CCTNAGG	1 cut(s)	933
BsuRI	GGCC	8 cut(s)	638, 731, 754, 881, 946, 987, 1023, 1183
BtsIMutI	CAGTG	1 cut(s)	1111
Cac8I	GCNNGC	1 cut(s)	858
CfoI	GCGC	5 cut(s)	851, 888, 995, 1015, 1133
Cfr13I	GGNCC	7 cut(s)	212, 559, 637, 753, 986, 1181, 1197
CseI	GACGC	2 cut(s)	638, 840
Csp6I	GTAC	3 cut(s)	288, 543, 929
CviAII	CATG	8 cut(s)	55, 193, 472, 493, 792, 810, 1036, 1128
CviQI	GTAC	3 cut(s)	288, 543, 929
DdeI	CTNAG	4 cut(s)	617, 914, 933, 1071
DpnI	GATC	5 cut(s)	144, 257, 327, 920, 1233
DpnII	GATC	5 cut(s)	142, 255, 325, 918, 1231
EaeI	YGGCCR	2 cut(s)	729, 1021
Eam1104I	CTCTTC	2 cut(s)	75, 515
EarI	CTCTTC	2 cut(s)	75, 515
Eco130I	CCWWGG	1 cut(s)	908
Eco147I	AGGCCT	1 cut(s)	946
Eco47I	GGWCC	3 cut(s)	212, 559, 1197
Eco47III	AGCGCT	1 cut(s)	1014
Eco81I	CCTNAGG	1 cut(s)	933
Eco91I	GGTNACC	1 cut(s)	152
EcoO109I	RGGNCCY	2 cut(s)	212, 637
EcoO65I	GGTNACC	1 cut(s)	152
EcoRII	CCWGG	2 cut(s)	214, 1210
EcoT14I	CCWWGG	1 cut(s)	908
ErhI	CCWWGG	1 cut(s)	908
FaeI	CATG	8 cut(s)	58, 196, 475, 496, 795, 813, 1039, 1131
FaqI	GGGAC	1 cut(s)	719
FatI	CATG	8 cut(s)	54, 192, 471, 492, 791, 809, 1035, 1127
Fnu4HI	GCNGC	1 cut(s)	873
Fsp4HI	GCNGC	1 cut(s)	873
FspBI	CTAG	2 cut(s)	309, 1041
GlaI	GCGC	5 cut(s)	850, 887, 994, 1014, 1132
GluI	GCNGC	1 cut(s)	873
GsuI	CTGGAG	1 cut(s)	609
HaeII	RGCGCY	1 cut(s)	1016
HaeIII	GGCC	8 cut(s)	638, 731, 754, 881, 946, 987, 1023, 1183
HapII	CCGG	1 cut(s)	756
HgaI	GACGC	2 cut(s)	638, 840
HhaI	GCGC	5 cut(s)	851, 888, 995, 1015, 1133
Hin1I	GRCGYC	1 cut(s)	630
Hin1II	CATG	8 cut(s)	58, 196, 475, 496, 795, 813, 1039, 1131
Hin6I	GCGC	5 cut(s)	849, 886, 993, 1013, 1131
HinP1I	GCGC	5 cut(s)	849, 886, 993, 1013, 1131
HindIII	AAGCTT	2 cut(s)	28, 416
HinfI	GANTC	7 cut(s)	169, 234, 320, 582, 600, 654, 788
HpaII	CCGG	1 cut(s)	756
HphI	GGTGA	5 cut(s)	49, 164, 171, 569, 595
Hpy166II	GTNNAC	2 cut(s)	831, 895
Hpy188I	TCNGA	2 cut(s)	325, 778
Hpy188III	TCNNGA	5 cut(s)	253, 626, 651, 1085, 1153
Hpy8I	GTNNAC	2 cut(s)	831, 895
Hpy99I	CGWCG	1 cut(s)	856
HpyAV	CCTTC	6 cut(s)	196, 396, 507, 558, 871, 933
HpyCH4III	ACNGT	1 cut(s)	1092
HpyCH4IV	ACGT	1 cut(s)	722
HpyCH4V	TGCA	9 cut(s)	165, 249, 302, 348, 660, 809, 860, 1149, 1165
HpyF10VI	GCNNNNNNNGC	3 cut(s)	857, 862, 878
HpyF3I	CTNAG	4 cut(s)	617, 914, 933, 1071
HpySE526I	ACGT	1 cut(s)	722
Hsp92I	GRCGYC	1 cut(s)	630
Hsp92II	CATG	8 cut(s)	58, 196, 475, 496, 795, 813, 1039, 1131
HspAI	GCGC	5 cut(s)	849, 886, 993, 1013, 1131
KpnI	GGTACC	1 cut(s)	932
Kzo9I	GATC	5 cut(s)	142, 255, 325, 918, 1231
LmnI	GCTCC	2 cut(s)	455, 653
LweI	GCATC	2 cut(s)	258, 1158
MaeI	CTAG	2 cut(s)	309, 1041
MaeII	ACGT	1 cut(s)	722
MaeIII	GTNAC	3 cut(s)	152, 259, 601
MalI	GATC	5 cut(s)	144, 257, 327, 920, 1233
MbiI	CCGCTC	1 cut(s)	648
MboI	GATC	5 cut(s)	142, 255, 325, 918, 1231
MboII	GAAGA	6 cut(s)	92, 105, 329, 459, 502, 1129
MflI	RGATCY	1 cut(s)	918
MlsI	TGGCCA	1 cut(s)	1023
MluCI	AATT	6 cut(s)	159, 297, 552, 814, 1046, 1221
MluNI	TGGCCA	1 cut(s)	1023
MlyI	GAGTC	4 cut(s)	243, 591, 609, 797
MmeI	TCCRAC	3 cut(s)	30, 211, 586
Mox20I	TGGCCA	1 cut(s)	1023
MscI	TGGCCA	1 cut(s)	1023
MseI	TTAA	3 cut(s)	423, 803, 999
MslI	CAYNNNNRTG	3 cut(s)	197, 887, 1126
Msp20I	TGGCCA	1 cut(s)	1023
MspI	CCGG	1 cut(s)	756
MspR9I	CCNGG	3 cut(s)	216, 756, 1212
MvaI	CCWGG	2 cut(s)	216, 1212
MvnI	CGCG	5 cut(s)	851, 886, 888, 993, 995
MwoI	GCNNNNNNNGC	3 cut(s)	857, 862, 878
NciI	CCSGG	1 cut(s)	756
NdeII	GATC	5 cut(s)	142, 255, 325, 918, 1231
NlaIII	CATG	8 cut(s)	58, 196, 475, 496, 795, 813, 1039, 1131
NlaIV	GGNNCC	3 cut(s)	213, 920, 930
NmeAIII	GCCGAG	3 cut(s)	348, 658, 1159
NmuCI	GTSAC	2 cut(s)	152, 601
NspI	RCATGY	1 cut(s)	496
NspV	TTCGAA	1 cut(s)	172
OliI	CACNNNNGTG	1 cut(s)	887
PceI	AGGCCT	1 cut(s)	946
PfeI	GAWTC	3 cut(s)	169, 320, 654
PkrI	GCNGC	1 cut(s)	874
PleI	GAGTC	4 cut(s)	242, 590, 608, 796
PpsI	GAGTC	4 cut(s)	242, 590, 608, 796
PpuMI	RGGWCCY	1 cut(s)	212
Psp5II	RGGWCCY	1 cut(s)	212
Psp6I	CCWGG	2 cut(s)	214, 1210
PspEI	GGTNACC	1 cut(s)	152
PspGI	CCWGG	2 cut(s)	214, 1210
PspN4I	GGNNCC	3 cut(s)	213, 920, 930
PspPI	GGNCC	7 cut(s)	212, 559, 637, 753, 986, 1181, 1197
PspPPI	RGGWCCY	1 cut(s)	212
PstI	CTGCAG	1 cut(s)	1167
PsuI	RGATCY	1 cut(s)	918
RsaI	GTAC	3 cut(s)	289, 544, 930
RsaNI	GTAC	3 cut(s)	288, 543, 929
RseI	CAYNNNNRTG	3 cut(s)	197, 887, 1126
SaqAI	TTAA	3 cut(s)	423, 803, 999
SatI	GCNGC	1 cut(s)	873
Sau3AI	GATC	5 cut(s)	142, 255, 325, 918, 1231
Sau96I	GGNCC	7 cut(s)	212, 559, 637, 753, 986, 1181, 1197
SchI	GAGTC	4 cut(s)	243, 591, 609, 797
ScrFI	CCNGG	3 cut(s)	216, 756, 1212
SfaNI	GCATC	2 cut(s)	258, 1158
SfcI	CTRYAG	1 cut(s)	1163
SfuI	TTCGAA	1 cut(s)	172
SinI	GGWCC	3 cut(s)	212, 559, 1197
SmiMI	CAYNNNNRTG	3 cut(s)	197, 887, 1126
Sse9I	AATT	6 cut(s)	159, 297, 552, 814, 1046, 1221
SseBI	AGGCCT	1 cut(s)	946
SsiI	CCGC	4 cut(s)	646, 782, 872, 995
SspMI	CTAG	2 cut(s)	309, 1041
StuI	AGGCCT	1 cut(s)	946
StyD4I	CCNGG	3 cut(s)	214, 754, 1210
StyI	CCWWGG	1 cut(s)	908
TaaI	ACNGT	1 cut(s)	1092
TaiI	ACGT	1 cut(s)	725
TaqI	TCGA	3 cut(s)	172, 336, 598
TasI	AATT	6 cut(s)	159, 297, 552, 814, 1046, 1221
TauI	GCSGC	1 cut(s)	875
TfiI	GAWTC	3 cut(s)	169, 320, 654
Tru1I	TTAA	3 cut(s)	423, 803, 999
Tru9I	TTAA	3 cut(s)	423, 803, 999
TscAI	CASTG	1 cut(s)	1118
TseFI	GTSAC	2 cut(s)	152, 601
Tsp45I	GTSAC	2 cut(s)	152, 601
TspDTI	ATGAA	4 cut(s)	71, 105, 330, 456
TspRI	CASTG	1 cut(s)	1118
VpaK11BI	GGWCC	3 cut(s)	212, 559, 1197
XceI	RCATGY	1 cut(s)	496
XcmI	CCANNNNNNNNNTGG	1 cut(s)	889
XspI	CTAG	2 cut(s)	309, 1041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.