MD15G1295100.v1.1

N-acetyltransferase HLS1

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
27619139 .. 27620785
1647 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1295100.v1.1.491

Sequence Viewer

Length: 1251 bp
ATGGGCGAGGATGACGGAATGGTTTTTAGTTTAGTGGTGAGAGAGTTCGACCCCATCAAGGATTGCGAAATGGTTCAAGACGTTGAGAGGCGCTGCGAGGTCGGTCCCAGCGGCGGACTCTCCCTCTTTACCGACCTCCTTGGCGACCCGATTTGCAGGGTCCGCCATTCTCCTGCCTATCTCATGCTGGTGGCAGAGGTGGTGGGGGCGGAGAAGGAGAGAGAGATAGTTGGGATGATAAGAGGTTGCATCAAAACCGTTACATGCGGCAAGAAGCTCTCTAGAAATGGTAAAAGCGTTACTGCTGGCGATGTCACTCTCAAGCCCCTCCCTGTTTACACCAAACTCGCTTACATCTTGGGCCTCCGTGTCTCTCCTTCTCACAGGAGGATGGGAATAGGGTTAAGGCTAGTGAGCAGAGTGGAGGAGTGGTTTCGAGAAAACGGGGCGGAGTATTCGTACATGGCCACCGAGAACGACAACCAAGCCTCCGTCAAGCTCTTCACCGACAAATGCGGCTACGTCAAGTTCCGTACGCCCACTATCCTTGTAAACCCGGTCTACGCCCACCGGGTCAAGGTCTCCTCCCGCGTCACCGTCATCGAGCTTTCCCCCTCCGACGCCGAGGCACTCTACCGCCGCCGGTTCGCCACCACCGAGTTCTTCCCCCGCGACATTGACTCAGTCCTCAACAACCGCCTCAGCCTCGGCACGTTCCTCGCCCTGCCGCGTGGCAGCGTGACGGAGGAGACGTGGCCCGGCGCGGATCATTTCTTGGCCGACCCGCCCGAGTCATGGGCCATCCTCAGCGTCTGGAACTCGAAGGACGTGTTCACATTAGAAGTCAAAGGCGCGTCGCTCGTGAAACGCACGCTCGCGAAGACGACGAGGTTGGTGGATCGGGCCTTGCCGTGGATGAGGCTGCCGTCGGTTCCGGACATTTTCAGGCCGTTCGGGGTACACTTCTTGTACGGGCTCGGAGGAGAGGGCCCACGCGCGGCAAAGATGGTGAAGGCACTGTGCGGCCACGCGCACAACTTGGCGAAGGAGCGCGGTTGCGGGGTGGTGGCGACGGAGGTGTCGAGCCGCGAACCGCTGAGGTTAGGAATCCCGCACTGGAAGAGGCTATCGTGCGACGAGGACATGTGGTGCATCAAGCGGCTCGGGGAAGACTACAGTGACGGCTCTGTCGGTGACTGGACAAAGTCGGCACCTGGCATGTCCATTTTTGTCGACCCCAGAGAAATCTAA

Protein Analysis

417

Amino Acids

46.37

Weight (kDa)

8.59

Isoelectric Point (pI)

36.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 68 - 174 4.8e-15 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 70 - 175 4.5e-06 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1078, 1187
AccB1I GGYRCC 1 cut(s) 1210
AccI GTMKAC 2 cut(s) 561, 1233
AccIII TCCGGA 1 cut(s) 934
AclWI GGATC 2 cut(s) 774, 906
AcoI YGGCCR 3 cut(s) 465, 777, 1024
AcyI GRCGYC 1 cut(s) 621
AfaI GTAC 4 cut(s) 461, 535, 960, 971
AfiI CCNNNNNNNGG 6 cut(s) 58, 113, 577, 795, 912, 997
AflIII ACRYGT 2 cut(s) 828, 1143
AgsI TTSAA 1 cut(s) 77
AjiI CACGTC 2 cut(s) 753, 829
AjnI CCWGG 1 cut(s) 1213
AluBI AGCT 3 cut(s) 277, 499, 607
AluI AGCT 3 cut(s) 277, 499, 607
Alw26I GTCTC 3 cut(s) 376, 586, 743
AlwI GGATC 2 cut(s) 774, 906
AlwNI CAGNNNCTG 1 cut(s) 813
Ama87I CYCGRG 2 cut(s) 788, 1163
Aor13HI TCCGGA 1 cut(s) 934
AoxI GGCC 9 cut(s) 361, 465, 755, 777, 798, 903, 947, 988, 1024
ApaI GGGCCC 1 cut(s) 992
ApeKI GCWGC 3 cut(s) 93, 735, 922
Asp700I GAANNNNTTC 1 cut(s) 72
AspLEI GCGC 6 cut(s) 93, 764, 854, 998, 1033, 1053
AspS9I GGNCC 8 cut(s) 104, 160, 361, 756, 798, 903, 988, 989
AsuC2I CCSGG 3 cut(s) 557, 572, 759
AsuHPI GGTGA 5 cut(s) 49, 496, 586, 1021, 1205
AvaI CYCGRG 2 cut(s) 788, 1163
AvaII GGWCC 2 cut(s) 104, 160
BaeGI GKGCMC 1 cut(s) 992
BalI TGGCCA 1 cut(s) 467
BanI GGYRCC 1 cut(s) 1210
BanII GRGCYC 2 cut(s) 978, 992
BauI CACGAG 1 cut(s) 860
BbsI GAAGAC 2 cut(s) 887, 1176
BbvCI CCTCAGC 3 cut(s) 701, 806, 1097
BbvI GCAGC 3 cut(s) 80, 747, 909
BccI CCATC 4 cut(s) 62, 385, 809, 1000
BceAI ACGGC 4 cut(s) 895, 910, 934, 1198
BcgI CGANNNNNNTGC 2 cut(s) 700, 734
BciT130I CCWGG 1 cut(s) 1215
BcnI CCSGG 3 cut(s) 557, 572, 759
BcoDI GTCTC 3 cut(s) 376, 586, 743
BfaI CTAG 2 cut(s) 282, 410
BfmI CTRYAG 1 cut(s) 1174
BfoI RGCGCY 1 cut(s) 94
Bme1390I CCNGG 4 cut(s) 557, 572, 759, 1215
Bme18I GGWCC 2 cut(s) 104, 160
BmeT110I CYCGRG 2 cut(s) 788, 1163
BmgBI CACGTC 2 cut(s) 753, 829
BmgT120I GGNCC 8 cut(s) 104, 160, 361, 756, 798, 903, 988, 989
BmiI GGNNCC 5 cut(s) 106, 161, 933, 990, 1212
BmrFI CCNGG 4 cut(s) 557, 572, 759, 1215
BmsI GCATC 2 cut(s) 258, 1161
BpiI GAAGAC 2 cut(s) 887, 1176
Bpu10I CCTNAGC 3 cut(s) 701, 806, 1097
BpuEI CTTGAG 1 cut(s) 305
BpuMI CCSGG 3 cut(s) 557, 572, 759
BsaHI GRCGYC 1 cut(s) 621
BsaI GGTCTC 1 cut(s) 586
BsaJI CCNNGG 4 cut(s) 139, 624, 706, 911
BsaWI WCCGGW 1 cut(s) 934
BsaXI ACNNNNNCTCC 8 cut(s) 416, 443, 446, 473, 473, 503, 737, 767
Bsc4I CCNNNNNNNGG 6 cut(s) 58, 113, 577, 795, 912, 997
Bse118I RCCGGY 1 cut(s) 642
Bse1I ACTGG 2 cut(s) 1121, 1202
BseAI TCCGGA 1 cut(s) 934
BseBI CCWGG 1 cut(s) 1215
BseDI CCNNGG 4 cut(s) 139, 624, 706, 911
BseGI GGATG 5 cut(s) 16, 240, 396, 801, 921
BseLI CCNNNNNNNGG 6 cut(s) 58, 113, 577, 795, 912, 997
BseMII CTCAG 4 cut(s) 696, 715, 820, 1088
BseNI ACTGG 2 cut(s) 1121, 1202
BseRI GAGGAG 4 cut(s) 440, 574, 761, 996
BseSI GKGCMC 1 cut(s) 992
BseXI GCAGC 3 cut(s) 80, 747, 909
BseYI CCCAGC 1 cut(s) 107
BshFI GGCC 9 cut(s) 363, 467, 757, 779, 800, 905, 949, 990, 1026
BshNI GGYRCC 1 cut(s) 1210
BsiHKCI CYCGRG 2 cut(s) 788, 1163
BsiSI CCGG 5 cut(s) 557, 571, 643, 759, 935
BsiWI CGTACG 1 cut(s) 533
BslFI GGGAC 1 cut(s) 90
BslI CCNNNNNNNGG 6 cut(s) 58, 113, 577, 795, 912, 997
BsmAI GTCTC 3 cut(s) 376, 586, 743
BsmBI CGTCTC 1 cut(s) 743
BsmFI GGGAC 1 cut(s) 90
BsnI GGCC 9 cut(s) 363, 467, 757, 779, 800, 905, 949, 990, 1026
Bso31I GGTCTC 1 cut(s) 586
BsoBI CYCGRG 2 cut(s) 788, 1163
Bsp120I GGGCCC 1 cut(s) 988
Bsp1286I GDGCHC 2 cut(s) 978, 992
Bsp13I TCCGGA 1 cut(s) 934
Bsp143I GATC 2 cut(s) 766, 898
Bsp68I TCGCGA 1 cut(s) 878
BspANI GGCC 9 cut(s) 363, 467, 757, 779, 800, 905, 949, 990, 1026
BspCNI CTCAG 4 cut(s) 695, 714, 819, 1089
BspEI TCCGGA 1 cut(s) 934
BspLI GGNNCC 5 cut(s) 106, 161, 933, 990, 1212
BspPI GGATC 2 cut(s) 774, 906
BspQI GCTCTTC 1 cut(s) 506
BspT107I GGYRCC 1 cut(s) 1210
BspTNI GGTCTC 1 cut(s) 586
BsrFI RCCGGY 1 cut(s) 642
BsrI ACTGG 2 cut(s) 1121, 1202
BssAI RCCGGY 1 cut(s) 642
BssECI CCNNGG 4 cut(s) 139, 624, 706, 911
BssMI GATC 2 cut(s) 766, 898
BssNI GRCGYC 1 cut(s) 621
BssSI CACGAG 1 cut(s) 860
BssT1I CCWWGG 1 cut(s) 139
Bst2BI CACGAG 1 cut(s) 860
Bst2UI CCWGG 1 cut(s) 1215
Bst4CI ACNGT 4 cut(s) 259, 598, 1020, 1178
Bst6I CTCTTC 2 cut(s) 506, 1115
BstACI GRCGYC 1 cut(s) 621
BstC8I GCNNGC 3 cut(s) 307, 872, 876
BstDEI CTNAG 4 cut(s) 682, 701, 806, 1097
BstDSI CCRYGG 1 cut(s) 911
BstF5I GGATG 5 cut(s) 16, 240, 396, 801, 921
BstH2I RGCGCY 1 cut(s) 94
BstHHI GCGC 6 cut(s) 93, 764, 854, 998, 1033, 1053
BstKTI GATC 2 cut(s) 769, 901
BstMAI GTCTC 3 cut(s) 376, 586, 743
BstMBI GATC 2 cut(s) 766, 898
BstMWI GCNNNNNNNGC 1 cut(s) 162
BstNI CCWGG 1 cut(s) 1215
BstNSI RCATGY 3 cut(s) 267, 1147, 1222
BstSCI CCNGG 4 cut(s) 555, 570, 757, 1213
BstSFI CTRYAG 1 cut(s) 1174
BstSLI GKGCMC 1 cut(s) 992
BstV1I GCAGC 3 cut(s) 80, 747, 909
BstV2I GAAGAC 2 cut(s) 887, 1176
BsuRI GGCC 9 cut(s) 363, 467, 757, 779, 800, 905, 949, 990, 1026
BtgI CCRYGG 1 cut(s) 911
BtgZI GCGATG 1 cut(s) 324
BtrI CACGTC 2 cut(s) 753, 829
BtsCI GGATG 5 cut(s) 16, 240, 396, 801, 921
BtsIMutI CAGTG 3 cut(s) 1016, 1114, 1183
BtuMI TCGCGA 1 cut(s) 878
Cac8I GCNNGC 3 cut(s) 307, 872, 876
CaiI CAGNNNCTG 1 cut(s) 813
CfoI GCGC 6 cut(s) 93, 764, 854, 998, 1033, 1053
Cfr10I RCCGGY 1 cut(s) 642
Cfr13I GGNCC 8 cut(s) 104, 160, 361, 756, 798, 903, 988, 989
CseI GACGC 4 cut(s) 580, 629, 799, 843
Csp6I GTAC 4 cut(s) 460, 534, 959, 970
CspCI CAANNNNNGTGG 2 cut(s) 529, 564
CviAII CATG 6 cut(s) 184, 264, 463, 795, 1144, 1219
CviQI GTAC 4 cut(s) 460, 534, 959, 970
DdeI CTNAG 4 cut(s) 682, 701, 806, 1097
DpnI GATC 2 cut(s) 768, 900
DpnII GATC 2 cut(s) 766, 898
DrdI GACNNNNNNGTC 2 cut(s) 1078, 1187
DseDI GACNNNNNNGTC 2 cut(s) 1078, 1187
EaeI YGGCCR 3 cut(s) 465, 777, 1024
Eam1104I CTCTTC 2 cut(s) 506, 1115
EarI CTCTTC 2 cut(s) 506, 1115
EciI GGCGGA 4 cut(s) 129, 152, 224, 464
Eco130I CCWWGG 1 cut(s) 139
Eco24I GRGCYC 2 cut(s) 978, 992
Eco31I GGTCTC 1 cut(s) 586
Eco47I GGWCC 2 cut(s) 104, 160
Eco88I CYCGRG 2 cut(s) 788, 1163
EcoO109I RGGNCCY 1 cut(s) 988
EcoRII CCWGG 1 cut(s) 1213
EcoT14I CCWWGG 1 cut(s) 139
EcoT38I GRGCYC 2 cut(s) 978, 992
ErhI CCWWGG 1 cut(s) 139
Esp3I CGTCTC 1 cut(s) 743
FaeI CATG 6 cut(s) 187, 267, 466, 798, 1147, 1222
FaiI YATR 6 cut(s) 185, 265, 464, 796, 1145, 1220
FaqI GGGAC 1 cut(s) 90
FatI CATG 6 cut(s) 183, 263, 462, 794, 1143, 1218
FauI CCCGC 5 cut(s) 596, 677, 792, 1052, 1119
FblI GTMKAC 2 cut(s) 561, 1233
FokI GGATG 5 cut(s) 23, 247, 403, 788, 928
FriOI GRGCYC 2 cut(s) 978, 992
FspBI CTAG 2 cut(s) 282, 410
GlaI GCGC 6 cut(s) 92, 763, 853, 997, 1032, 1052
GsaI CCCAGC 1 cut(s) 111
HaeII RGCGCY 1 cut(s) 94
HaeIII GGCC 9 cut(s) 363, 467, 757, 779, 800, 905, 949, 990, 1026
HapII CCGG 5 cut(s) 557, 571, 643, 759, 935
HgaI GACGC 4 cut(s) 580, 629, 799, 843
HhaI GCGC 6 cut(s) 93, 764, 854, 998, 1033, 1053
Hin1I GRCGYC 1 cut(s) 621
Hin1II CATG 6 cut(s) 187, 267, 466, 798, 1147, 1222
Hin6I GCGC 6 cut(s) 91, 762, 852, 996, 1031, 1051
HinP1I GCGC 6 cut(s) 91, 762, 852, 996, 1031, 1051
HincII GTYRAC 1 cut(s) 1234
HindII GTYRAC 1 cut(s) 1234
HinfI GANTC 4 cut(s) 117, 680, 791, 1107
HpaII CCGG 5 cut(s) 557, 571, 643, 759, 935
HphI GGTGA 5 cut(s) 49, 496, 586, 1021, 1205
Hpy166II GTNNAC 6 cut(s) 337, 553, 562, 834, 961, 1234
Hpy188I TCNGA 2 cut(s) 619, 980
Hpy188III TCNNGA 7 cut(s) 77, 282, 437, 814, 862, 877, 935
Hpy8I GTNNAC 6 cut(s) 337, 553, 562, 834, 961, 1234
Hpy99I CGWCG 6 cut(s) 623, 859, 889, 931, 1075, 1139
HpyAV CCTTC 5 cut(s) 208, 387, 817, 1006, 1039
HpyCH4III ACNGT 4 cut(s) 259, 598, 1020, 1178
HpyCH4IV ACGT 5 cut(s) 81, 522, 713, 752, 828
HpyCH4V TGCA 3 cut(s) 156, 249, 1152
HpyF10VI GCNNNNNNNGC 1 cut(s) 162
HpyF3I CTNAG 4 cut(s) 682, 701, 806, 1097
HpySE526I ACGT 5 cut(s) 81, 522, 713, 752, 828
Hsp92I GRCGYC 1 cut(s) 621
Hsp92II CATG 6 cut(s) 187, 267, 466, 798, 1147, 1222
HspAI GCGC 6 cut(s) 91, 762, 852, 996, 1031, 1051
Kpn2I TCCGGA 1 cut(s) 934
Kzo9I GATC 2 cut(s) 766, 898
LguI GCTCTTC 1 cut(s) 506
LmnI GCTCC 1 cut(s) 1048
Lsp1109I GCAGC 3 cut(s) 80, 747, 909
LweI GCATC 2 cut(s) 258, 1161
MaeI CTAG 2 cut(s) 282, 410
MaeII ACGT 5 cut(s) 81, 522, 713, 752, 828
MaeIII GTNAC 7 cut(s) 259, 298, 313, 592, 739, 1178, 1193
MalI GATC 2 cut(s) 768, 900
MboI GATC 2 cut(s) 766, 898
MboII GAAGA 5 cut(s) 493, 655, 892, 1132, 1181
MhlI GDGCHC 2 cut(s) 978, 992
MlsI TGGCCA 1 cut(s) 467
MluNI TGGCCA 1 cut(s) 467
MlyI GAGTC 3 cut(s) 111, 674, 800
MmeI TCCRAC 1 cut(s) 642
Mox20I TGGCCA 1 cut(s) 467
MroI TCCGGA 1 cut(s) 934
MroXI GAANNNNTTC 1 cut(s) 72
MscI TGGCCA 1 cut(s) 467
MseI TTAA 1 cut(s) 404
MslI CAYNNNNRTG 1 cut(s) 188
Msp20I TGGCCA 1 cut(s) 467
MspA1I CMGCKG 2 cut(s) 111, 1096
MspI CCGG 5 cut(s) 557, 571, 643, 759, 935
MspR9I CCNGG 4 cut(s) 557, 572, 759, 1215
MvaI CCWGG 1 cut(s) 1215
MwoI GCNNNNNNNGC 1 cut(s) 162
NciI CCSGG 3 cut(s) 557, 572, 759
NdeII GATC 2 cut(s) 766, 898
NlaIII CATG 6 cut(s) 187, 267, 466, 798, 1147, 1222
NlaIV GGNNCC 5 cut(s) 106, 161, 933, 990, 1212
NmeAIII GCCGAG 2 cut(s) 649, 687
NmuCI GTSAC 5 cut(s) 313, 592, 739, 1178, 1193
NruI TCGCGA 1 cut(s) 878
NspI RCATGY 3 cut(s) 267, 1147, 1222
PciI ACATGT 1 cut(s) 1143
PciSI GCTCTTC 1 cut(s) 506
PcsI WCGNNNNNNNCGW 3 cut(s) 654, 749, 1079
PdmI GAANNNNTTC 1 cut(s) 72
PfeI GAWTC 1 cut(s) 1107
Pfl23II CGTACG 1 cut(s) 533
PflFI GACNNNGTC 2 cut(s) 683, 1204
PleI GAGTC 3 cut(s) 111, 674, 799
PpsI GAGTC 3 cut(s) 111, 674, 799
PscI ACATGT 1 cut(s) 1143
Psp6I CCWGG 1 cut(s) 1213
PspFI CCCAGC 1 cut(s) 107
PspGI CCWGG 1 cut(s) 1213
PspLI CGTACG 1 cut(s) 533
PspN4I GGNNCC 5 cut(s) 106, 161, 933, 990, 1212
PspOMI GGGCCC 1 cut(s) 988
PspPI GGNCC 8 cut(s) 104, 160, 361, 756, 798, 903, 988, 989
PstNI CAGNNNCTG 1 cut(s) 813
PsyI GACNNNGTC 2 cut(s) 683, 1204
RruI TCGCGA 1 cut(s) 878
RsaI GTAC 4 cut(s) 461, 535, 960, 971
RsaNI GTAC 4 cut(s) 460, 534, 959, 970
RseI CAYNNNNRTG 1 cut(s) 188
SalI GTCGAC 1 cut(s) 1232
SapI GCTCTTC 1 cut(s) 506
SaqAI TTAA 1 cut(s) 404
Sau3AI GATC 2 cut(s) 766, 898
Sau96I GGNCC 8 cut(s) 104, 160, 361, 756, 798, 903, 988, 989
SchI GAGTC 3 cut(s) 111, 674, 800
ScrFI CCNGG 4 cut(s) 557, 572, 759, 1215
SduI GDGCHC 2 cut(s) 978, 992
SfaNI GCATC 2 cut(s) 258, 1161
SfcI CTRYAG 1 cut(s) 1174
SinI GGWCC 2 cut(s) 104, 160
SmiMI CAYNNNNRTG 1 cut(s) 188
SmlI CTYRAG 1 cut(s) 320
SmoI CTYRAG 1 cut(s) 320
SspMI CTAG 2 cut(s) 282, 410
StyD4I CCNGG 4 cut(s) 555, 570, 757, 1213
StyI CCWWGG 1 cut(s) 139
TaaI ACNGT 4 cut(s) 259, 598, 1020, 1178
TaiI ACGT 5 cut(s) 84, 525, 716, 755, 831
TaqI TCGA 6 cut(s) 48, 436, 603, 821, 1082, 1233
TaqII GACCGA 1 cut(s) 92
TauI GCSGC 9 cut(s) 114, 270, 519, 642, 730, 1001, 1026, 1089, 1162
TfiI GAWTC 1 cut(s) 1107
Tru1I TTAA 1 cut(s) 404
Tru9I TTAA 1 cut(s) 404
TscAI CASTG 3 cut(s) 1023, 1121, 1183
TseFI GTSAC 5 cut(s) 313, 592, 739, 1178, 1193
TseI GCWGC 3 cut(s) 93, 735, 922
Tsp45I GTSAC 5 cut(s) 313, 592, 739, 1178, 1193
TspGWI ACGGA 6 cut(s) 30, 356, 481, 521, 758, 1088
TspRI CASTG 3 cut(s) 1023, 1121, 1183
Tth111I GACNNNGTC 2 cut(s) 683, 1204
VpaK11BI GGWCC 2 cut(s) 104, 160
XbaI TCTAGA 1 cut(s) 281
XceI RCATGY 3 cut(s) 267, 1147, 1222
XmiI GTMKAC 2 cut(s) 561, 1233
XmnI GAANNNNTTC 1 cut(s) 72
XspI CTAG 2 cut(s) 282, 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.