MD02G1183200.v1.1

N-acetyltransferase HLS1

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
16534385 .. 16536020
1636 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1183200.v1.1.491

Sequence Viewer

Length: 1251 bp
ATGGGTGAGGATAACGGAAGGGTTTTTAGTTTAGTGGTGAGGGAGTTCGACCCGAGCAAGGACTGCGAAATGGTACAAAACGTCGAGAGGCGGTGCGAGGTCGGTCCCAGCGGCGGACTCTCCATATTTACCGACCTCCTCGGCGACCCGATTTGCAGGGTCCGCCACTCTCCTGCCTATCTCATGCTGGTGGCAGAGCTGGTGGGGGAGGACAAAGACAAGGAGATAGTGGGGATGATAAGAGGTTGCATCAAAACCGTTGCATGCGGCAAGAAACTCTCTAGAAATGGTAAAAACGTTACCGCTGATGATGTCACTCTCAAGCCCCTCCCTGTTTACACCAAACTCGCCTACATCTTGGGCCTCCGTGTCTCTCCTTTTCACAGGAGGATGGGAATAGGGTTAAAGCTAGTGCAGAGAGTGGAGGAGTGGTTTCGAGAAAATGGGGCGGAGTATTCGTACATGGCCACCGAGAACGACAACCAAGCCTCCGTCAACCTCTTCGTCGACAAATGCGGCTACGCCAAGTTCCGTACGCCCACCATCCTCGTCAACCCGGTCTACGCCCACAGGGTCAAGCTCTCCTCCCGCGTCACCGTCATCCACCTGTCCCCCTCCGACTCTGAGGCACTCTACCGCCGCCGGTTCTCCACTACAGAGTTCTTCCCCCGCGACATTGACTCCGTCCTCAGCAACCGCCTCAGCCTCGGCACTTTCCTAGCCGTGCCGCGTGGAAGCGTGACGGCGGAGACGTGGCCCGGCGCGGATCACTTTTTGGCTGACCCGCCCGAGTCCTGGGCCGTCCTCAGCGTATGGAACTCAAAGGACGTTTTCACGTTGGAGGTCAAAGGCGTGTCGCTCGTGAAACGCATGCTCGCGAAGACGACGAGGTTGGTGGATCGGGCCCTTCCGTGGATGCAGCTGCCGTCGGTGCCGGACATTTTCAGGCCGTTCGGGGTCCACTTCTTGTACGGGCTCGGAGGGGAGGGCCCACTCGCGGCGAAGTTCGTGAAGGCGCTGTGCGGCCACGCGCACAACTTGGCGAAAGAGCGCGGGTGCGGGGTTGTGGCGACGGAGGTGTCGAGCCGGGAGCCGCTTAGGTTAGGAATCCCGCACTGGAAGAGTCTGTCGTGCGCCGAGGATTTGTGGTGCATCAAGCGGCTAGGGGAAGACTACGGTGACGGCTCTGTCGGTGACTGGACTAAGTCGCCACCCGGCATGTCTATTTTTGTCGACCCCAGAGAAATATAA

Protein Analysis

417

Amino Acids

46.27

Weight (kDa)

8.59

Isoelectric Point (pI)

35.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 71 - 174 1.6e-14 Acetyltransferase (GNAT) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1078, 1187
AccB1I GGYRCC 1 cut(s) 931
AccI GTMKAC 3 cut(s) 507, 561, 1233
AccII CGCG 8 cut(s) 591, 672, 730, 764, 878, 998, 1031, 1053
AclI AACGTT 1 cut(s) 297
AclWI GGATC 2 cut(s) 774, 906
AcoI YGGCCR 2 cut(s) 465, 1024
AfaI GTAC 4 cut(s) 75, 461, 535, 971
AfiI CCNNNNNNNGG 5 cut(s) 58, 113, 795, 912, 997
AjiI CACGTC 1 cut(s) 753
AjnI CCWGG 1 cut(s) 794
AluBI AGCT 4 cut(s) 199, 409, 580, 922
AluI AGCT 4 cut(s) 199, 409, 580, 922
Alw26I GTCTC 2 cut(s) 376, 743
AlwI GGATC 2 cut(s) 774, 906
Ama87I CYCGRG 2 cut(s) 52, 788
AoxI GGCC 8 cut(s) 361, 465, 755, 798, 903, 947, 988, 1024
ApaI GGGCCC 2 cut(s) 907, 992
ApeKI GCWGC 2 cut(s) 919, 922
AspLEI GCGC 5 cut(s) 764, 1018, 1033, 1053, 1136
AsuC2I CCSGG 4 cut(s) 557, 759, 1088, 1215
AsuHPI GGTGA 5 cut(s) 17, 49, 586, 1190, 1205
AvaI CYCGRG 2 cut(s) 52, 788
AvaII GGWCC 3 cut(s) 104, 160, 958
BaeGI GKGCMC 2 cut(s) 907, 992
BalI TGGCCA 1 cut(s) 467
BanI GGYRCC 1 cut(s) 931
BanII GRGCYC 3 cut(s) 907, 978, 992
BauI CACGAG 1 cut(s) 860
BbsI GAAGAC 2 cut(s) 887, 1176
BbvCI CCTCAGC 3 cut(s) 689, 701, 806
BbvI GCAGC 2 cut(s) 909, 931
BccI CCATC 2 cut(s) 385, 551
BceAI ACGGC 6 cut(s) 707, 759, 785, 910, 934, 1198
BciT130I CCWGG 1 cut(s) 796
BcnI CCSGG 4 cut(s) 557, 759, 1088, 1215
BcoDI GTCTC 2 cut(s) 376, 743
BfaI CTAG 4 cut(s) 282, 410, 719, 1163
BfmI CTRYAG 1 cut(s) 654
BfoI RGCGCY 1 cut(s) 1019
Bme1390I CCNGG 5 cut(s) 557, 759, 796, 1088, 1215
Bme18I GGWCC 3 cut(s) 104, 160, 958
BmeT110I CYCGRG 2 cut(s) 52, 788
BmgBI CACGTC 1 cut(s) 753
BmiI GGNNCC 7 cut(s) 106, 161, 905, 933, 959, 990, 1092
BmrFI CCNGG 5 cut(s) 557, 759, 796, 1088, 1215
BmsI GCATC 3 cut(s) 258, 906, 1161
BpiI GAAGAC 2 cut(s) 887, 1176
Bpu10I CCTNAGC 4 cut(s) 689, 701, 806, 1097
BpuEI CTTGAG 1 cut(s) 305
BpuMI CCSGG 4 cut(s) 557, 759, 1088, 1215
BsaJI CCNNGG 5 cut(s) 139, 706, 795, 911, 1137
BsaXI ACNNNNNCTCC 8 cut(s) 416, 443, 446, 473, 473, 503, 665, 695
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 113, 795, 912, 997
Bse118I RCCGGY 1 cut(s) 642
Bse1I ACTGG 2 cut(s) 1121, 1202
BseBI CCWGG 1 cut(s) 796
BseDI CCNNGG 5 cut(s) 139, 706, 795, 911, 1137
BseGI GGATG 5 cut(s) 240, 396, 543, 600, 921
BseLI CCNNNNNNNGG 5 cut(s) 58, 113, 795, 912, 997
BseMII CTCAG 4 cut(s) 615, 703, 715, 820
BseNI ACTGG 2 cut(s) 1121, 1202
BseRI GAGGAG 3 cut(s) 128, 440, 574
BseSI GKGCMC 2 cut(s) 907, 992
BseXI GCAGC 2 cut(s) 909, 931
BseYI CCCAGC 1 cut(s) 107
BsgI GTGCAG 1 cut(s) 434
Bsh1236I CGCG 8 cut(s) 591, 672, 730, 764, 878, 998, 1031, 1053
BshFI GGCC 8 cut(s) 363, 467, 757, 800, 905, 949, 990, 1026
BshNI GGYRCC 1 cut(s) 931
BsiHKCI CYCGRG 2 cut(s) 52, 788
BsiSI CCGG 6 cut(s) 557, 643, 759, 935, 1087, 1215
BsiWI CGTACG 1 cut(s) 533
BslFI GGGAC 2 cut(s) 90, 595
BslI CCNNNNNNNGG 5 cut(s) 58, 113, 795, 912, 997
BsmAI GTCTC 2 cut(s) 376, 743
BsmBI CGTCTC 1 cut(s) 743
BsmFI GGGAC 2 cut(s) 90, 595
BsnI GGCC 8 cut(s) 363, 467, 757, 800, 905, 949, 990, 1026
BsoBI CYCGRG 2 cut(s) 52, 788
Bsp120I GGGCCC 2 cut(s) 903, 988
Bsp1286I GDGCHC 3 cut(s) 907, 978, 992
Bsp143I GATC 2 cut(s) 766, 898
Bsp68I TCGCGA 1 cut(s) 878
BspANI GGCC 8 cut(s) 363, 467, 757, 800, 905, 949, 990, 1026
BspCNI CTCAG 4 cut(s) 616, 702, 714, 819
BspFNI CGCG 8 cut(s) 591, 672, 730, 764, 878, 998, 1031, 1053
BspLI GGNNCC 7 cut(s) 106, 161, 905, 933, 959, 990, 1092
BspPI GGATC 2 cut(s) 774, 906
BspT107I GGYRCC 1 cut(s) 931
BsrFI RCCGGY 1 cut(s) 642
BsrI ACTGG 2 cut(s) 1121, 1202
BssAI RCCGGY 1 cut(s) 642
BssECI CCNNGG 5 cut(s) 139, 706, 795, 911, 1137
BssMI GATC 2 cut(s) 766, 898
BssSI CACGAG 1 cut(s) 860
Bst2BI CACGAG 1 cut(s) 860
Bst2UI CCWGG 1 cut(s) 796
Bst4CI ACNGT 3 cut(s) 259, 598, 1178
Bst6I CTCTTC 2 cut(s) 506, 1115
BstAPI GCANNNNNTGC 1 cut(s) 63
BstC8I GCNNGC 3 cut(s) 265, 872, 876
BstDEI CTNAG 6 cut(s) 624, 689, 701, 806, 1097, 1203
BstDSI CCRYGG 1 cut(s) 911
BstF5I GGATG 5 cut(s) 240, 396, 543, 600, 921
BstFNI CGCG 8 cut(s) 591, 672, 730, 764, 878, 998, 1031, 1053
BstH2I RGCGCY 1 cut(s) 1019
BstHHI GCGC 5 cut(s) 764, 1018, 1033, 1053, 1136
BstKTI GATC 2 cut(s) 769, 901
BstMAI GTCTC 2 cut(s) 376, 743
BstMBI GATC 2 cut(s) 766, 898
BstMWI GCNNNNNNNGC 3 cut(s) 63, 162, 931
BstNI CCWGG 1 cut(s) 796
BstNSI RCATGY 3 cut(s) 267, 874, 1222
BstSCI CCNGG 5 cut(s) 555, 757, 794, 1086, 1213
BstSFI CTRYAG 1 cut(s) 654
BstSLI GKGCMC 2 cut(s) 907, 992
BstUI CGCG 8 cut(s) 591, 672, 730, 764, 878, 998, 1031, 1053
BstV1I GCAGC 2 cut(s) 909, 931
BstV2I GAAGAC 2 cut(s) 887, 1176
BsuRI GGCC 8 cut(s) 363, 467, 757, 800, 905, 949, 990, 1026
BtgI CCRYGG 1 cut(s) 911
BtrI CACGTC 1 cut(s) 753
BtsCI GGATG 5 cut(s) 240, 396, 543, 600, 921
BtsIMutI CAGTG 1 cut(s) 1114
BtuMI TCGCGA 1 cut(s) 878
Cac8I GCNNGC 3 cut(s) 265, 872, 876
CfoI GCGC 5 cut(s) 764, 1018, 1033, 1053, 1136
Cfr10I RCCGGY 1 cut(s) 642
CseI GACGC 1 cut(s) 580
Csp6I GTAC 4 cut(s) 74, 460, 534, 970
CviAII CATG 5 cut(s) 184, 264, 463, 871, 1219
CviQI GTAC 4 cut(s) 74, 460, 534, 970
DdeI CTNAG 6 cut(s) 624, 689, 701, 806, 1097, 1203
DpnI GATC 2 cut(s) 768, 900
DpnII GATC 2 cut(s) 766, 898
DrdI GACNNNNNNGTC 2 cut(s) 1078, 1187
DseDI GACNNNNNNGTC 2 cut(s) 1078, 1187
EaeI YGGCCR 2 cut(s) 465, 1024
Eam1104I CTCTTC 2 cut(s) 506, 1115
EarI CTCTTC 2 cut(s) 506, 1115
EciI GGCGGA 4 cut(s) 129, 152, 464, 761
Eco24I GRGCYC 3 cut(s) 907, 978, 992
Eco47I GGWCC 3 cut(s) 104, 160, 958
Eco88I CYCGRG 2 cut(s) 52, 788
EcoO109I RGGNCCY 2 cut(s) 904, 988
EcoRII CCWGG 1 cut(s) 794
EcoT38I GRGCYC 3 cut(s) 907, 978, 992
Esp3I CGTCTC 1 cut(s) 743
FaeI CATG 5 cut(s) 187, 267, 466, 874, 1222
FaiI YATR 8 cut(s) 125, 185, 265, 464, 814, 872, 1220, 1249
FaqI GGGAC 2 cut(s) 90, 595
FatI CATG 5 cut(s) 183, 263, 462, 870, 1218
FauI CCCGC 6 cut(s) 596, 677, 792, 1046, 1052, 1119
FblI GTMKAC 3 cut(s) 507, 561, 1233
FokI GGATG 5 cut(s) 247, 403, 530, 587, 928
FriOI GRGCYC 3 cut(s) 907, 978, 992
FspBI CTAG 4 cut(s) 282, 410, 719, 1163
GlaI GCGC 5 cut(s) 763, 1017, 1032, 1052, 1135
GsaI CCCAGC 1 cut(s) 111
HaeII RGCGCY 1 cut(s) 1019
HaeIII GGCC 8 cut(s) 363, 467, 757, 800, 905, 949, 990, 1026
HapII CCGG 6 cut(s) 557, 643, 759, 935, 1087, 1215
HgaI GACGC 1 cut(s) 580
HhaI GCGC 5 cut(s) 764, 1018, 1033, 1053, 1136
Hin1II CATG 5 cut(s) 187, 267, 466, 874, 1222
Hin6I GCGC 5 cut(s) 762, 1016, 1031, 1051, 1134
HinP1I GCGC 5 cut(s) 762, 1016, 1031, 1051, 1134
HincII GTYRAC 4 cut(s) 496, 508, 553, 1234
HindII GTYRAC 4 cut(s) 496, 508, 553, 1234
HinfI GANTC 6 cut(s) 117, 620, 680, 791, 1107, 1123
HpaII CCGG 6 cut(s) 557, 643, 759, 935, 1087, 1215
HphI GGTGA 5 cut(s) 17, 49, 586, 1190, 1205
Hpy166II GTNNAC 7 cut(s) 337, 496, 508, 553, 562, 961, 1234
Hpy188I TCNGA 3 cut(s) 619, 625, 980
Hpy188III TCNNGA 6 cut(s) 85, 282, 437, 862, 877, 1009
Hpy8I GTNNAC 7 cut(s) 337, 496, 508, 553, 562, 961, 1234
Hpy99I CGWCG 5 cut(s) 86, 509, 889, 931, 1075
HpyAV CCTTC 3 cut(s) 12, 917, 1006
HpyCH4III ACNGT 3 cut(s) 259, 598, 1178
HpyCH4IV ACGT 5 cut(s) 81, 297, 752, 828, 836
HpyCH4V TGCA 6 cut(s) 156, 249, 263, 415, 919, 1152
HpyF10VI GCNNNNNNNGC 3 cut(s) 63, 162, 931
HpyF3I CTNAG 6 cut(s) 624, 689, 701, 806, 1097, 1203
HpySE526I ACGT 5 cut(s) 81, 297, 752, 828, 836
Hsp92II CATG 5 cut(s) 187, 267, 466, 874, 1222
HspAI GCGC 5 cut(s) 762, 1016, 1031, 1051, 1134
Kzo9I GATC 2 cut(s) 766, 898
LmnI GCTCC 1 cut(s) 1090
Lsp1109I GCAGC 2 cut(s) 909, 931
LweI GCATC 3 cut(s) 258, 906, 1161
MaeI CTAG 4 cut(s) 282, 410, 719, 1163
MaeII ACGT 5 cut(s) 81, 297, 752, 828, 836
MaeIII GTNAC 6 cut(s) 298, 313, 592, 739, 1178, 1193
MalI GATC 2 cut(s) 768, 900
MboI GATC 2 cut(s) 766, 898
MboII GAAGA 5 cut(s) 493, 655, 892, 1132, 1181
MhlI GDGCHC 3 cut(s) 907, 978, 992
MlsI TGGCCA 1 cut(s) 467
MluNI TGGCCA 1 cut(s) 467
MlyI GAGTC 5 cut(s) 111, 614, 674, 800, 1132
MmeI TCCRAC 2 cut(s) 642, 819
Mox20I TGGCCA 1 cut(s) 467
MscI TGGCCA 1 cut(s) 467
MseI TTAA 1 cut(s) 404
MslI CAYNNNNRTG 1 cut(s) 188
Msp20I TGGCCA 1 cut(s) 467
MspA1I CMGCKG 3 cut(s) 111, 305, 922
MspI CCGG 6 cut(s) 557, 643, 759, 935, 1087, 1215
MspR9I CCNGG 5 cut(s) 557, 759, 796, 1088, 1215
MvaI CCWGG 1 cut(s) 796
MvnI CGCG 8 cut(s) 591, 672, 730, 764, 878, 998, 1031, 1053
MwoI GCNNNNNNNGC 3 cut(s) 63, 162, 931
NciI CCSGG 4 cut(s) 557, 759, 1088, 1215
NdeII GATC 2 cut(s) 766, 898
NlaIII CATG 5 cut(s) 187, 267, 466, 874, 1222
NlaIV GGNNCC 7 cut(s) 106, 161, 905, 933, 959, 990, 1092
NmeAIII GCCGAG 3 cut(s) 120, 687, 1162
NmuCI GTSAC 5 cut(s) 313, 592, 739, 1178, 1193
NruI TCGCGA 1 cut(s) 878
NspI RCATGY 3 cut(s) 267, 874, 1222
PaeI GCATGC 2 cut(s) 267, 874
PcsI WCGNNNNNNNCGW 2 cut(s) 749, 1079
PfeI GAWTC 1 cut(s) 1107
Pfl23II CGTACG 1 cut(s) 533
PflFI GACNNNGTC 2 cut(s) 683, 1204
PleI GAGTC 5 cut(s) 111, 614, 674, 799, 1131
PpsI GAGTC 5 cut(s) 111, 614, 674, 799, 1131
Psp1406I AACGTT 1 cut(s) 297
Psp6I CCWGG 1 cut(s) 794
PspFI CCCAGC 1 cut(s) 107
PspGI CCWGG 1 cut(s) 794
PspLI CGTACG 1 cut(s) 533
PspN4I GGNNCC 7 cut(s) 106, 161, 905, 933, 959, 990, 1092
PspOMI GGGCCC 2 cut(s) 903, 988
PsyI GACNNNGTC 2 cut(s) 683, 1204
PvuII CAGCTG 1 cut(s) 922
RruI TCGCGA 1 cut(s) 878
RsaI GTAC 4 cut(s) 75, 461, 535, 971
RsaNI GTAC 4 cut(s) 74, 460, 534, 970
RseI CAYNNNNRTG 1 cut(s) 188
SalI GTCGAC 2 cut(s) 506, 1232
SaqAI TTAA 1 cut(s) 404
Sau3AI GATC 2 cut(s) 766, 898
SchI GAGTC 5 cut(s) 111, 614, 674, 800, 1132
ScrFI CCNGG 5 cut(s) 557, 759, 796, 1088, 1215
SduI GDGCHC 3 cut(s) 907, 978, 992
SfaNI GCATC 3 cut(s) 258, 906, 1161
SfcI CTRYAG 1 cut(s) 654
SinI GGWCC 3 cut(s) 104, 160, 958
SmiMI CAYNNNNRTG 1 cut(s) 188
SmlI CTYRAG 1 cut(s) 320
SmoI CTYRAG 1 cut(s) 320
SphI GCATGC 2 cut(s) 267, 874
SspMI CTAG 4 cut(s) 282, 410, 719, 1163
StyD4I CCNGG 5 cut(s) 555, 757, 794, 1086, 1213
TaaI ACNGT 3 cut(s) 259, 598, 1178
TaiI ACGT 5 cut(s) 84, 300, 755, 831, 839
TaqI TCGA 6 cut(s) 48, 84, 436, 507, 1082, 1233
TaqII GACCGA 1 cut(s) 92
TauI GCSGC 9 cut(s) 114, 270, 519, 642, 730, 1001, 1026, 1096, 1162
TfiI GAWTC 1 cut(s) 1107
Tru1I TTAA 1 cut(s) 404
Tru9I TTAA 1 cut(s) 404
TscAI CASTG 1 cut(s) 1121
TseFI GTSAC 5 cut(s) 313, 592, 739, 1178, 1193
TseI GCWGC 2 cut(s) 919, 922
Tsp45I GTSAC 5 cut(s) 313, 592, 739, 1178, 1193
TspGWI ACGGA 7 cut(s) 30, 356, 481, 521, 673, 900, 1088
TspRI CASTG 1 cut(s) 1121
Tth111I GACNNNGTC 2 cut(s) 683, 1204
VpaK11BI GGWCC 3 cut(s) 104, 160, 958
XbaI TCTAGA 1 cut(s) 281
XceI RCATGY 3 cut(s) 267, 874, 1222
XmiI GTMKAC 3 cut(s) 507, 561, 1233
XspI CTAG 4 cut(s) 282, 410, 719, 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.