Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006529

Physical Location & Seq

Genomic Coordinates Forward (+)

13138882 .. 13140392

Gene Structure 1511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G30860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 648 bp

ATGGTGCTAAAGGTGTACGGACCTCACTTTGCTTCACCAAAGAGAGCTTTGGTCACACTGATCGAGAAGGGCGTTGCCTTCGAGACCATCCCCGTCGATCTCATGAAAGGAGAACACAAGCAGCCTGCTTATCTCGCTCTACAGCCTTTTGGTACTGTTCCTGCTGTTGTTGACGGTGACTACAAAATCTTCGAGTCCCGTGCGGTGATGAGGTACGTAGCTGAGAAGTACAGGTCACAAGGACCTGATCTTTTGGGGAAAACCGTTGAAGACAGAGGTCAAGTTGAACAATGGCTTGATGTGGAAGCGACCACTTACCACCCACCGCTATTGAACTTAACGCTTCACATAATGTTCGCATCAGTCATGGGATTCCCATCTGATGAGAAGCTGATCAAGGAGAGTGAAGAGAAGCTTGCGGGTGTTCTTGATGTCTACGAGGCACATCTCTCAAAGAGCAAGTACTTGGCCGGTGACTTCGTGAGCTTGGCTGATTTGGCTCACCTCCCGTTCACTGATTACTTGGTTGGTCCGATTGGGAAAGCTTACATGATCAAAGATAGGAAACACGTGAGCGCGTGGTGGGATGATATTAGCAGCCGTCCTGCGTGGAAGGAGACTGTTGCCAAGTATTCATTCCCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0004601 GO:0004602 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016740 GO:0016765 GO:0019748 GO:0030054 GO:0030312 GO:0033218 GO:0034641 GO:0042221 GO:0042277 GO:0042742 GO:0043167 GO:0043168 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048037 GO:0048046 GO:0050896 GO:0051186 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071704 GO:0071944 GO:0072341 GO:0097237 GO:0098542 GO:0098754 GO:0098869 GO:1900750 GO:1901564 GO:1901681 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N

Protein Analysis

215

Amino Acids

24.15

Weight (kDa)

6.17

Isoelectric Point (pI)

35.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GST_N	PF02798	1 - 75	2.5e-16	Glutathione S-transferase, N-terminal domain
GST_N_2	PF13409	14 - 75	1.1e-11	Glutathione S-transferase, N-terminal domain
GST_N_3	PF13417	14 - 78	5.7e-10	Glutathione S-transferase, N-terminal domain
GST_C	PF00043	122 - 202	1.1e-15	Glutathione S-transferase, C-terminal domain
GST_C_3	PF14497	129 - 205	1.3e-06	Glutathione S-transferase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006529)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30860 AT2G30860
fragaria_vesca	FvH4_6g38760
malus_domestica	MD09G1147100.v1.1 MD09G1147300.v1.1 MD09G1147400.v1.1 MD17G1133600.v1.1 MD17G1133800.v1.1 MD17G1134300.v1.1
prunus_persica	Prupe.3G178100_v2.0.a1 Prupe.3G178200_v2.0.a1 Prupe.3G178300_v2.0.a1
pyrus_communis	pycom09g06760 pycom17g12830 pycom17g12850
rosa_chinensis	RchiOBHm_Chr2g0152311
rosa_laevigata	RLG00000020627
rosa_multiflora	Rmu_sc0004002.1_g000002
rosa_rugosa	Rorug02G0432000 Rorug02G0432100 Rorug02G0432200
rosa_samantha	Rh2AG493800 Rh2BG506100 Rh2CG480100 Rh2DG517200
rosa_wichuraiana	Rw2G040610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	435
AccII	CGCG	1 cut(s)	578
AciI	CCGC	3 cut(s)	203, 326, 419
AcoI	YGGCCR	1 cut(s)	468
AcvI	CACGTG	1 cut(s)	571
AfaI	GTAC	5 cut(s)	17, 154, 215, 230, 464
AflIII	ACRYGT	1 cut(s)	568
AgsI	TTSAA	3 cut(s)	269, 287, 334
AjuI	GAANNNNNNNTTGG	1 cut(s)	620
AluBI	AGCT	7 cut(s)	47, 221, 391, 415, 486, 545, 644
AluI	AGCT	7 cut(s)	47, 221, 391, 415, 486, 545, 644
Alw26I	GTCTC	2 cut(s)	77, 611
AoxI	GGCC	1 cut(s)	468
ApeKI	GCWGC	2 cut(s)	121, 597
AspLEI	GCGC	1 cut(s)	578
AspS9I	GGNCC	3 cut(s)	20, 242, 530
AsuHPI	GGTGA	5 cut(s)	27, 188, 217, 485, 494
AvaII	GGWCC	3 cut(s)	20, 242, 530
BbrPI	CACGTG	1 cut(s)	571
BbsI	GAAGAC	1 cut(s)	276
BbvI	GCAGC	2 cut(s)	133, 609
BccI	CCATC	2 cut(s)	95, 385
BceAI	ACGGC	1 cut(s)	585
BcgI	CGANNNNNNTGC	2 cut(s)	182, 216
BclI	TGATCA	2 cut(s)	393, 552
BcoDI	GTCTC	2 cut(s)	77, 611
BfmI	CTRYAG	1 cut(s)	140
BisI	GCNGC	2 cut(s)	122, 598
BlsI	GCNGC	2 cut(s)	123, 599
BmcAI	AGTACT	1 cut(s)	464
Bme18I	GGWCC	3 cut(s)	20, 242, 530
BmgT120I	GGNCC	3 cut(s)	20, 242, 530
BmsI	GCATC	1 cut(s)	368
BoxI	GACNNNNGTC	1 cut(s)	276
BpiI	GAAGAC	1 cut(s)	276
BsaAI	YACGTR	2 cut(s)	217, 571
BsaBI	GATNNNNATC	1 cut(s)	376
BsaI	GGTCTC	1 cut(s)	77
Bse118I	RCCGGY	1 cut(s)	470
Bse8I	GATNNNNATC	1 cut(s)	376
BseGI	GGATG	2 cut(s)	87, 592
BseJI	GATNNNNATC	1 cut(s)	376
BseMII	CTCAG	1 cut(s)	213
BseXI	GCAGC	2 cut(s)	133, 609
BseYI	CCCAGC	1 cut(s)	640
Bsh1236I	CGCG	1 cut(s)	578
BshFI	GGCC	1 cut(s)	470
BsiSI	CCGG	1 cut(s)	471
BslFI	GGGAC	1 cut(s)	181
BsmAI	GTCTC	2 cut(s)	77, 611
BsmFI	GGGAC	1 cut(s)	181
BsnI	GGCC	1 cut(s)	470
Bso31I	GGTCTC	1 cut(s)	77
Bsp143I	GATC	5 cut(s)	60, 97, 247, 393, 552
BspACI	CCGC	3 cut(s)	203, 326, 419
BspANI	GGCC	1 cut(s)	470
BspCNI	CTCAG	1 cut(s)	214
BspFNI	CGCG	1 cut(s)	578
BspHI	TCATGA	1 cut(s)	102
BspTNI	GGTCTC	1 cut(s)	77
BsrFI	RCCGGY	1 cut(s)	470
BssAI	RCCGGY	1 cut(s)	470
BssMI	GATC	5 cut(s)	60, 97, 247, 393, 552
Bst4CI	ACNGT	4 cut(s)	157, 176, 265, 622
Bst6I	CTCTTC	1 cut(s)	402
BstBAI	YACGTR	2 cut(s)	217, 571
BstC8I	GCNNGC	2 cut(s)	126, 417
BstDEI	CTNAG	1 cut(s)	222
BstF5I	GGATG	2 cut(s)	87, 592
BstFNI	CGCG	1 cut(s)	578
BstHHI	GCGC	1 cut(s)	578
BstKTI	GATC	5 cut(s)	63, 100, 250, 396, 555
BstMAI	GTCTC	2 cut(s)	77, 611
BstMBI	GATC	5 cut(s)	60, 97, 247, 393, 552
BstMWI	GCNNNNNNNGC	2 cut(s)	134, 497
BstPAI	GACNNNNGTC	1 cut(s)	276
BstSFI	CTRYAG	1 cut(s)	140
BstSNI	TACGTA	1 cut(s)	217
BstUI	CGCG	1 cut(s)	578
BstV1I	GCAGC	2 cut(s)	133, 609
BstV2I	GAAGAC	1 cut(s)	276
BsuRI	GGCC	1 cut(s)	470
BtsCI	GGATG	2 cut(s)	87, 592
BtsIMutI	CAGTG	2 cut(s)	56, 513
Cac8I	GCNNGC	2 cut(s)	126, 417
CciI	TCATGA	1 cut(s)	102
CfoI	GCGC	1 cut(s)	578
Cfr10I	RCCGGY	1 cut(s)	470
Cfr13I	GGNCC	3 cut(s)	20, 242, 530
Csp6I	GTAC	5 cut(s)	16, 153, 214, 229, 463
CspCI	CAANNNNNGTGG	2 cut(s)	312, 347
CviAII	CATG	3 cut(s)	103, 367, 550
CviQI	GTAC	5 cut(s)	16, 153, 214, 229, 463
DdeI	CTNAG	1 cut(s)	222
DpnI	GATC	5 cut(s)	62, 99, 249, 395, 554
DpnII	GATC	5 cut(s)	60, 97, 247, 393, 552
EaeI	YGGCCR	1 cut(s)	468
Eam1104I	CTCTTC	1 cut(s)	402
EarI	CTCTTC	1 cut(s)	402
Eco105I	TACGTA	1 cut(s)	217
Eco31I	GGTCTC	1 cut(s)	77
Eco47I	GGWCC	3 cut(s)	20, 242, 530
Eco72I	CACGTG	1 cut(s)	571
EcoO109I	RGGNCCY	1 cut(s)	242
FaeI	CATG	3 cut(s)	106, 370, 553
FaiI	YATR	4 cut(s)	104, 350, 368, 551
FalI	AAGNNNNNCTT	2 cut(s)	399, 431
FaqI	GGGAC	1 cut(s)	181
FatI	CATG	3 cut(s)	102, 366, 549
FauI	CCCGC	1 cut(s)	412
FbaI	TGATCA	2 cut(s)	393, 552
FblI	GTMKAC	1 cut(s)	435
Fnu4HI	GCNGC	2 cut(s)	122, 598
FokI	GGATG	2 cut(s)	74, 599
Fsp4HI	GCNGC	2 cut(s)	122, 598
GlaI	GCGC	1 cut(s)	577
GluI	GCNGC	2 cut(s)	122, 598
GsaI	CCCAGC	1 cut(s)	644
HaeIII	GGCC	1 cut(s)	470
HapII	CCGG	1 cut(s)	471
HhaI	GCGC	1 cut(s)	578
Hin1II	CATG	3 cut(s)	106, 370, 553
Hin6I	GCGC	1 cut(s)	576
HinP1I	GCGC	1 cut(s)	576
HincII	GTYRAC	1 cut(s)	172
HindII	GTYRAC	1 cut(s)	172
HindIII	AAGCTT	2 cut(s)	413, 543
HinfI	GANTC	2 cut(s)	194, 372
HpaII	CCGG	1 cut(s)	471
HphI	GGTGA	5 cut(s)	27, 188, 217, 485, 494
Hpy166II	GTNNAC	4 cut(s)	16, 172, 436, 513
Hpy188I	TCNGA	2 cut(s)	382, 534
Hpy188III	TCNNGA	5 cut(s)	64, 82, 103, 428, 481
Hpy8I	GTNNAC	4 cut(s)	16, 172, 436, 513
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	3 cut(s)	61, 88, 607
HpyCH4III	ACNGT	4 cut(s)	157, 176, 265, 622
HpyCH4IV	ACGT	2 cut(s)	216, 570
HpyF10VI	GCNNNNNNNGC	2 cut(s)	134, 497
HpyF3I	CTNAG	1 cut(s)	222
HpySE526I	ACGT	2 cut(s)	216, 570
Hsp92II	CATG	3 cut(s)	106, 370, 553
HspAI	GCGC	1 cut(s)	576
Ksp22I	TGATCA	2 cut(s)	393, 552
Kzo9I	GATC	5 cut(s)	60, 97, 247, 393, 552
LpnPI	CCDG	6 cut(s)	138, 174, 217, 258, 484, 618
Lsp1109I	GCAGC	2 cut(s)	133, 609
LweI	GCATC	1 cut(s)	368
MaeII	ACGT	2 cut(s)	216, 570
MaeIII	GTNAC	4 cut(s)	52, 176, 234, 473
MalI	GATC	5 cut(s)	62, 99, 249, 395, 554
MboI	GATC	5 cut(s)	60, 97, 247, 393, 552
MboII	GAAGA	3 cut(s)	181, 281, 419
MlyI	GAGTC	1 cut(s)	203
MnlI	CCTC	5 cut(s)	33, 204, 269, 433, 515
MseI	TTAA	2 cut(s)	338, 646
MspI	CCGG	1 cut(s)	471
MvnI	CGCG	1 cut(s)	578
MwoI	GCNNNNNNNGC	2 cut(s)	134, 497
NdeII	GATC	5 cut(s)	60, 97, 247, 393, 552
NlaIII	CATG	3 cut(s)	106, 370, 553
NmuCI	GTSAC	4 cut(s)	52, 176, 234, 473
PagI	TCATGA	1 cut(s)	102
PcsI	WCGNNNNNNNCGW	1 cut(s)	69
PfeI	GAWTC	1 cut(s)	372
PkrI	GCNGC	2 cut(s)	123, 599
PleI	GAGTC	1 cut(s)	202
PmaCI	CACGTG	1 cut(s)	571
PmlI	CACGTG	1 cut(s)	571
PpsI	GAGTC	1 cut(s)	202
Ppu21I	YACGTR	2 cut(s)	217, 571
PpuMI	RGGWCCY	1 cut(s)	242
PshAI	GACNNNNGTC	1 cut(s)	276
Psp5II	RGGWCCY	1 cut(s)	242
PspCI	CACGTG	1 cut(s)	571
PspFI	CCCAGC	1 cut(s)	640
PspPI	GGNCC	3 cut(s)	20, 242, 530
PspPPI	RGGWCCY	1 cut(s)	242
RsaI	GTAC	5 cut(s)	17, 154, 215, 230, 464
RsaNI	GTAC	5 cut(s)	16, 153, 214, 229, 463
SaqAI	TTAA	2 cut(s)	338, 646
SatI	GCNGC	2 cut(s)	122, 598
Sau3AI	GATC	5 cut(s)	60, 97, 247, 393, 552
Sau96I	GGNCC	3 cut(s)	20, 242, 530
ScaI	AGTACT	1 cut(s)	464
SchI	GAGTC	1 cut(s)	203
SfaNI	GCATC	1 cut(s)	368
SfcI	CTRYAG	1 cut(s)	140
SinI	GGWCC	3 cut(s)	20, 242, 530
SnaBI	TACGTA	1 cut(s)	217
SsiI	CCGC	3 cut(s)	203, 326, 419
TaaI	ACNGT	4 cut(s)	157, 176, 265, 622
TaiI	ACGT	2 cut(s)	219, 573
TaqI	TCGA	4 cut(s)	63, 81, 96, 192
TatI	WGTACW	2 cut(s)	228, 462
TfiI	GAWTC	1 cut(s)	372
Tru1I	TTAA	2 cut(s)	338, 646
Tru9I	TTAA	2 cut(s)	338, 646
TscAI	CASTG	2 cut(s)	63, 520
TseFI	GTSAC	4 cut(s)	52, 176, 234, 473
TseI	GCWGC	2 cut(s)	121, 597
Tsp45I	GTSAC	4 cut(s)	52, 176, 234, 473
TspDTI	ATGAA	2 cut(s)	119, 624
TspGWI	ACGGA	1 cut(s)	33
TspRI	CASTG	2 cut(s)	63, 520
VpaK11BI	GGWCC	3 cut(s)	20, 242, 530
XmiI	GTMKAC	1 cut(s)	435
ZrmI	AGTACT	1 cut(s)	464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.