Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0006529

Physical Location & Seq

Genomic Coordinates Reverse (-)

19481374 .. 19482581

Gene Structure 1208 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G178200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 645 bp

ATGGTGGTAAAGGTGTATGGCGCTGCCTATGCTTCCCCGAAGCGTGTGCTGGTGTGTCTTGTTGAGAAAGAGGTCGACTTTGAGACCATTCCCATTGATCTCTTCAAGGGAGAGCACAAACACCCTGAATTTCTCAAATTGCAGCCCTTTGGAACAGTTCCTCTCATTCAAGATGGGGATTATACTTTATATGAATCACGCGCAATCATAAGGTACTATGCCGAAAAATACAAGTCTCAAGGGACTGCTTTGCTAGGGAAGACAATTGAGGAAAGAGGGCTAGTTGAGCAATGGCTAGAGGTTGAAGCACACAACTTCCACCCACCACTCAACAACTTAGTCCTTCACATTTTGTTTGCCTCAGCATTGGGTTTTCCTTCAGATCCCAAGGTCATTCAAGAGAGTGAAGAAAAGCTAGGGAAGGTGTTGGACATTTATGAGGAGAGGCTGTCAAAGAGCAAGTACTTAGCTGGTGATTTCTTCAGCCTTGCTGATCTTAGCCACCTTCCATTTACTCAGTATATGGTGACTCTTTTGGGGAAGGAGTATCTGATAAAGGACAGAAAGCATGTCTCTGCTTGGTGGAATGATATTAGCAACAGACCATCTTGGAAGAAGGTCCTCGAGTTTGGTACCCCATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0004601 GO:0004602 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016740 GO:0016765 GO:0019748 GO:0030054 GO:0030312 GO:0033218 GO:0034641 GO:0042221 GO:0042277 GO:0042742 GO:0043167 GO:0043168 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048037 GO:0048046 GO:0050896 GO:0051186 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071704 GO:0071944 GO:0072341 GO:0097237 GO:0098542 GO:0098754 GO:0098869 GO:1900750 GO:1901564 GO:1901681 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N

Protein Analysis

215

Amino Acids

24.65

Weight (kDa)

6.18

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006529)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30860 AT2G30860
fragaria_vesca	FvH4_6g38760
malus_domestica	MD09G1147100.v1.1 MD09G1147300.v1.1 MD09G1147400.v1.1 MD17G1133600.v1.1 MD17G1133800.v1.1 MD17G1134300.v1.1
prunus_persica	Prupe.3G178100_v2.0.a1 Prupe.3G178200_v2.0.a1 Prupe.3G178300_v2.0.a1
pyrus_communis	pycom09g06760 pycom17g12830 pycom17g12850
rosa_chinensis	RchiOBHm_Chr2g0152311
rosa_laevigata	RLG00000020627
rosa_multiflora	Rmu_sc0004002.1_g000002
rosa_rugosa	Rorug02G0432000 Rorug02G0432100 Rorug02G0432200
rosa_samantha	Rh2AG493800 Rh2BG506100 Rh2CG480100 Rh2DG517200
rosa_wichuraiana	Rw2G040610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	632
AccB1I	GGYRCC	1 cut(s)	632
AccI	GTMKAC	1 cut(s)	75
AccII	CGCG	1 cut(s)	201
AclWI	GGATC	1 cut(s)	377
AcsI	RAATTY	1 cut(s)	128
AcuI	CTGAAG	2 cut(s)	363, 466
AfaI	GTAC	3 cut(s)	215, 464, 634
AgsI	TTSAA	4 cut(s)	106, 170, 305, 398
AluBI	AGCT	2 cut(s)	415, 470
AluI	AGCT	2 cut(s)	415, 470
Alw21I	GWGCWC	1 cut(s)	117
Alw26I	GTCTC	3 cut(s)	77, 240, 577
AlwI	GGATC	1 cut(s)	377
Ama87I	CYCGRG	1 cut(s)	623
ApeKI	GCWGC	2 cut(s)	23, 142
ApoI	RAATTY	1 cut(s)	128
Asp718I	GGTACC	1 cut(s)	632
AspLEI	GCGC	2 cut(s)	23, 203
AspS9I	GGNCC	1 cut(s)	619
AsuHPI	GGTGA	2 cut(s)	485, 538
AvaI	CYCGRG	1 cut(s)	623
AvaII	GGWCC	1 cut(s)	619
BanI	GGYRCC	1 cut(s)	632
BbsI	GAAGAC	1 cut(s)	266
Bbv12I	GWGCWC	1 cut(s)	117
BbvCI	CCTCAGC	1 cut(s)	361
BbvI	GCAGC	2 cut(s)	10, 154
BccI	CCATC	2 cut(s)	167, 613
BcgI	CGANNNNNNTGC	2 cut(s)	28, 62
BcoDI	GTCTC	3 cut(s)	77, 240, 577
BfaI	CTAG	4 cut(s)	254, 281, 296, 416
BfoI	RGCGCY	1 cut(s)	24
BisI	GCNGC	2 cut(s)	24, 143
BlsI	GCNGC	2 cut(s)	25, 144
BmcAI	AGTACT	1 cut(s)	464
Bme18I	GGWCC	1 cut(s)	619
BmeT110I	CYCGRG	1 cut(s)	623
BmgT120I	GGNCC	1 cut(s)	619
BmiI	GGNNCC	1 cut(s)	634
BpiI	GAAGAC	1 cut(s)	266
Bpu10I	CCTNAGC	1 cut(s)	361
BpuEI	CTTGAG	1 cut(s)	222
BsaI	GGTCTC	1 cut(s)	77
BsaJI	CCNNGG	1 cut(s)	387
BsaXI	ACNNNNNCTCC	2 cut(s)	434, 464
Bse3DI	GCAATG	1 cut(s)	296
BseDI	CCNNGG	1 cut(s)	387
BseMI	GCAATG	1 cut(s)	296
BseMII	CTCAG	2 cut(s)	375, 530
BseRI	GAGGAG	1 cut(s)	455
BseXI	GCAGC	2 cut(s)	10, 154
Bsh1236I	CGCG	1 cut(s)	201
BshNI	GGYRCC	1 cut(s)	632
BsiHKAI	GWGCWC	1 cut(s)	117
BsiHKCI	CYCGRG	1 cut(s)	623
BslFI	GGGAC	1 cut(s)	256
BsmAI	GTCTC	3 cut(s)	77, 240, 577
BsmFI	GGGAC	1 cut(s)	256
Bso31I	GGTCTC	1 cut(s)	77
BsoBI	CYCGRG	1 cut(s)	623
Bsp1286I	GDGCHC	1 cut(s)	117
Bsp143I	GATC	3 cut(s)	97, 382, 493
BspCNI	CTCAG	2 cut(s)	374, 529
BspFNI	CGCG	1 cut(s)	201
BspLI	GGNNCC	1 cut(s)	634
BspPI	GGATC	1 cut(s)	377
BspT107I	GGYRCC	1 cut(s)	632
BspTNI	GGTCTC	1 cut(s)	77
BsrDI	GCAATG	1 cut(s)	296
BssECI	CCNNGG	1 cut(s)	387
BssMI	GATC	3 cut(s)	97, 382, 493
BssT1I	CCWWGG	1 cut(s)	387
Bst4CI	ACNGT	1 cut(s)	157
Bst6I	CTCTTC	1 cut(s)	107
BstDEI	CTNAG	5 cut(s)	337, 361, 466, 497, 516
BstFNI	CGCG	1 cut(s)	201
BstH2I	RGCGCY	1 cut(s)	24
BstHHI	GCGC	2 cut(s)	23, 203
BstKTI	GATC	3 cut(s)	100, 385, 496
BstMAI	GTCTC	3 cut(s)	77, 240, 577
BstMBI	GATC	3 cut(s)	97, 382, 493
BstMWI	GCNNNNNNNGC	2 cut(s)	29, 286
BstNSI	RCATGY	1 cut(s)	572
BstUI	CGCG	1 cut(s)	201
BstV1I	GCAGC	2 cut(s)	10, 154
BstV2I	GAAGAC	1 cut(s)	266
BstX2I	RGATCY	1 cut(s)	382
BstYI	RGATCY	1 cut(s)	382
CfoI	GCGC	2 cut(s)	23, 203
Cfr13I	GGNCC	1 cut(s)	619
Csp6I	GTAC	3 cut(s)	214, 463, 633
CviAII	CATG	1 cut(s)	569
CviJI	RGCY	8 cut(s)	145, 280, 295, 415, 448, 470, 486, 501
CviKI_1	RGCY	8 cut(s)	145, 280, 295, 415, 448, 470, 486, 501
CviQI	GTAC	3 cut(s)	214, 463, 633
DdeI	CTNAG	5 cut(s)	337, 361, 466, 497, 516
DpnI	GATC	3 cut(s)	99, 384, 495
DpnII	GATC	3 cut(s)	97, 382, 493
Eam1104I	CTCTTC	1 cut(s)	107
EarI	CTCTTC	1 cut(s)	107
Eco130I	CCWWGG	1 cut(s)	387
Eco31I	GGTCTC	1 cut(s)	77
Eco47I	GGWCC	1 cut(s)	619
Eco57I	CTGAAG	2 cut(s)	363, 466
Eco88I	CYCGRG	1 cut(s)	623
EcoO109I	RGGNCCY	1 cut(s)	619
EcoT14I	CCWWGG	1 cut(s)	387
ErhI	CCWWGG	1 cut(s)	387
FaeI	CATG	1 cut(s)	572
FaqI	GGGAC	1 cut(s)	256
FatI	CATG	1 cut(s)	568
FblI	GTMKAC	1 cut(s)	75
Fnu4HI	GCNGC	2 cut(s)	24, 143
Fsp4HI	GCNGC	2 cut(s)	24, 143
FspBI	CTAG	4 cut(s)	254, 281, 296, 416
GlaI	GCGC	2 cut(s)	22, 202
GluI	GCNGC	2 cut(s)	24, 143
HaeII	RGCGCY	1 cut(s)	24
HhaI	GCGC	2 cut(s)	23, 203
Hin1II	CATG	1 cut(s)	572
Hin6I	GCGC	2 cut(s)	21, 201
HinP1I	GCGC	2 cut(s)	21, 201
HincII	GTYRAC	1 cut(s)	76
HindII	GTYRAC	1 cut(s)	76
HinfI	GANTC	2 cut(s)	194, 529
HphI	GGTGA	2 cut(s)	485, 538
Hpy166II	GTNNAC	1 cut(s)	76
Hpy188I	TCNGA	2 cut(s)	382, 552
Hpy188III	TCNNGA	2 cut(s)	170, 398
Hpy8I	GTNNAC	1 cut(s)	76
HpyAV	CCTTC	6 cut(s)	353, 387, 415, 515, 535, 610
HpyCH4III	ACNGT	1 cut(s)	157
HpyCH4V	TGCA	1 cut(s)	142
HpyF10VI	GCNNNNNNNGC	2 cut(s)	29, 286
HpyF3I	CTNAG	5 cut(s)	337, 361, 466, 497, 516
Hsp92II	CATG	1 cut(s)	572
HspAI	GCGC	2 cut(s)	21, 201
KpnI	GGTACC	1 cut(s)	636
Kzo9I	GATC	3 cut(s)	97, 382, 493
LpnPI	CCDG	3 cut(s)	35, 138, 456
Lsp1109I	GCAGC	2 cut(s)	10, 154
MaeI	CTAG	4 cut(s)	254, 281, 296, 416
MaeIII	GTNAC	1 cut(s)	526
MalI	GATC	3 cut(s)	99, 384, 495
MboI	GATC	3 cut(s)	97, 382, 493
MboII	GAAGA	5 cut(s)	94, 271, 419, 472, 625
MfeI	CAATTG	1 cut(s)	264
MflI	RGATCY	1 cut(s)	382
MhlI	GDGCHC	1 cut(s)	117
MluCI	AATT	3 cut(s)	128, 137, 264
MlyI	GAGTC	1 cut(s)	523
MmeI	TCCRAC	1 cut(s)	408
MnlI	CCTC	9 cut(s)	64, 171, 262, 269, 292, 370, 433, 438, 632
MunI	CAATTG	1 cut(s)	264
MvnI	CGCG	1 cut(s)	201
MwoI	GCNNNNNNNGC	2 cut(s)	29, 286
NdeII	GATC	3 cut(s)	97, 382, 493
NlaIII	CATG	1 cut(s)	572
NlaIV	GGNNCC	1 cut(s)	634
NmuCI	GTSAC	1 cut(s)	526
NspI	RCATGY	1 cut(s)	572
PaeR7I	CTCGAG	1 cut(s)	623
PfeI	GAWTC	1 cut(s)	194
PkrI	GCNGC	2 cut(s)	25, 144
PleI	GAGTC	1 cut(s)	523
PpsI	GAGTC	1 cut(s)	523
PpuMI	RGGWCCY	1 cut(s)	619
Psp5II	RGGWCCY	1 cut(s)	619
PspN4I	GGNNCC	1 cut(s)	634
PspPI	GGNCC	1 cut(s)	619
PspPPI	RGGWCCY	1 cut(s)	619
PspXI	VCTCGAGB	1 cut(s)	623
PsuI	RGATCY	1 cut(s)	382
RsaI	GTAC	3 cut(s)	215, 464, 634
RsaNI	GTAC	3 cut(s)	214, 463, 633
SalI	GTCGAC	1 cut(s)	74
SatI	GCNGC	2 cut(s)	24, 143
Sau3AI	GATC	3 cut(s)	97, 382, 493
Sau96I	GGNCC	1 cut(s)	619
ScaI	AGTACT	1 cut(s)	464
SchI	GAGTC	1 cut(s)	523
SduI	GDGCHC	1 cut(s)	117
Sfr274I	CTCGAG	1 cut(s)	623
SinI	GGWCC	1 cut(s)	619
SlaI	CTCGAG	1 cut(s)	623
SmlI	CTYRAG	2 cut(s)	237, 623
SmoI	CTYRAG	2 cut(s)	237, 623
Sse9I	AATT	3 cut(s)	128, 137, 264
SspMI	CTAG	4 cut(s)	254, 281, 296, 416
StyI	CCWWGG	1 cut(s)	387
TaaI	ACNGT	1 cut(s)	157
TaqI	TCGA	2 cut(s)	75, 624
TasI	AATT	3 cut(s)	128, 137, 264
TatI	WGTACW	1 cut(s)	462
TfiI	GAWTC	1 cut(s)	194
TseFI	GTSAC	1 cut(s)	526
TseI	GCWGC	2 cut(s)	23, 142
Tsp45I	GTSAC	1 cut(s)	526
TspDTI	ATGAA	1 cut(s)	207
VpaK11BI	GGWCC	1 cut(s)	619
XapI	RAATTY	1 cut(s)	128
XceI	RCATGY	1 cut(s)	572
XhoI	CTCGAG	1 cut(s)	623
XmiI	GTMKAC	1 cut(s)	75
XspI	CTAG	4 cut(s)	254, 281, 296, 416
ZrmI	AGTACT	1 cut(s)	464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.