Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0006529

Physical Location & Seq

Genomic Coordinates Reverse (-)

19476383 .. 19477588

Gene Structure 1206 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G178100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 654 bp

ATGGTGGTGAAGGTGTATGGCTCCGTCGACGCTTCCCCACAGCGTGTGCTGGCTTGCCTTGTGGAGAAAGAGATCGACTTTGAGATCATCCCCATTGATCTCTTCAAGGGGGAGCACAAGGACCCTGAGTTCCTCAAATTACAGCCCTTTGGACAAGTTCCTGTCATTCAAGATGGGGACTATACCCTGTATGAATCGCGTGCAATCATGAGATACTACGCAGAAAAATTCAAGTCCCAGGGTACTGAGTTGCTGGGAAAGACAATTGAGGAAAGAGGGCTTGTGGAACAATGGCTAGAGGTTGAAGCACAAAGATTCCACCCTCCAGTCTACAAGTTAGTCGTTCACATTCTGCTTGCCTCAGCGTTGGGTTTTCCTTCAGATCCCAAGATCATTCAAGAGAGCGAAGCAAAGCTGGGGAAGGTGTTGGACATTTATGAGGAGAGGCTCTCAAAGAGCAAGTACTTGGCTGGTGATTTCTTCAGCCTTGCTGATCTTAGCCACCTTCCGTTTAACCAGCACTTGGTGGCTGATTTGGGGAAGGAGCATATGATCAGGGACAGAAAACATGTCTCTGCTTGGTGGGATGATATCGGCAACAGGCCATCTTGGAAAAAAGTCCTCCAGCTTGGGGTGTTTGAATTGCCGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0004601 GO:0004602 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016740 GO:0016765 GO:0019748 GO:0030054 GO:0030312 GO:0033218 GO:0034641 GO:0042221 GO:0042277 GO:0042742 GO:0043167 GO:0043168 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048037 GO:0048046 GO:0050896 GO:0051186 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071704 GO:0071944 GO:0072341 GO:0097237 GO:0098542 GO:0098754 GO:0098869 GO:1900750 GO:1901564 GO:1901681 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N

Protein Analysis

218

Amino Acids

24.95

Weight (kDa)

5.83

Isoelectric Point (pI)

37.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006529)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30860 AT2G30860
fragaria_vesca	FvH4_6g38760
malus_domestica	MD09G1147100.v1.1 MD09G1147300.v1.1 MD09G1147400.v1.1 MD17G1133600.v1.1 MD17G1133800.v1.1 MD17G1134300.v1.1
prunus_persica	Prupe.3G178100_v2.0.a1 Prupe.3G178200_v2.0.a1 Prupe.3G178300_v2.0.a1
pyrus_communis	pycom09g06760 pycom17g12830 pycom17g12850
rosa_chinensis	RchiOBHm_Chr2g0152311
rosa_laevigata	RLG00000020627
rosa_multiflora	Rmu_sc0004002.1_g000002
rosa_rugosa	Rorug02G0432000 Rorug02G0432100 Rorug02G0432200
rosa_samantha	Rh2AG493800 Rh2BG506100 Rh2CG480100 Rh2DG517200
rosa_wichuraiana	Rw2G040610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	523
AccI	GTMKAC	2 cut(s)	27, 330
AccII	CGCG	1 cut(s)	199
AclWI	GGATC	1 cut(s)	377
AcsI	RAATTY	1 cut(s)	227
AcuI	CTGAAG	2 cut(s)	363, 466
AdeI	CACNNNGTG	2 cut(s)	44, 526
AfaI	GTAC	2 cut(s)	244, 464
AfiI	CCNNNNNNNGG	2 cut(s)	523, 631
AflIII	ACRYGT	1 cut(s)	568
AgsI	TTSAA	6 cut(s)	106, 170, 232, 305, 398, 641
AjnI	CCWGG	1 cut(s)	237
AloI	GAACNNNNNNTCC	2 cut(s)	113, 145
AluBI	AGCT	2 cut(s)	415, 628
AluI	AGCT	2 cut(s)	415, 628
Alw21I	GWGCWC	1 cut(s)	117
Alw26I	GTCTC	1 cut(s)	577
AlwI	GGATC	1 cut(s)	377
AoxI	GGCC	1 cut(s)	602
ApoI	RAATTY	1 cut(s)	227
AspS9I	GGNCC	1 cut(s)	121
AsuHPI	GGTGA	2 cut(s)	19, 485
AvaII	GGWCC	1 cut(s)	121
Bbv12I	GWGCWC	1 cut(s)	117
BbvCI	CCTCAGC	1 cut(s)	361
BccI	CCATC	2 cut(s)	167, 613
BciT130I	CCWGG	1 cut(s)	239
BclI	TGATCA	1 cut(s)	552
BcoDI	GTCTC	1 cut(s)	577
BfaI	CTAG	1 cut(s)	296
BmcAI	AGTACT	1 cut(s)	464
Bme1390I	CCNGG	1 cut(s)	239
Bme18I	GGWCC	1 cut(s)	121
BmgT120I	GGNCC	1 cut(s)	121
BmiI	GGNNCC	2 cut(s)	22, 123
BmrFI	CCNGG	1 cut(s)	239
BplI	GAGNNNNNCTC	2 cut(s)	434, 466
BpmI	CTGGAG	2 cut(s)	309, 608
Bpu10I	CCTNAGC	1 cut(s)	361
BsaJI	CCNNGG	2 cut(s)	237, 238
Bsc4I	CCNNNNNNNGG	2 cut(s)	523, 631
Bse1I	ACTGG	1 cut(s)	326
BseBI	CCWGG	1 cut(s)	239
BseDI	CCNNGG	2 cut(s)	237, 238
BseGI	GGATG	2 cut(s)	87, 592
BseLI	CCNNNNNNNGG	2 cut(s)	523, 631
BseMII	CTCAG	3 cut(s)	117, 237, 375
BseNI	ACTGG	1 cut(s)	326
BseRI	GAGGAG	1 cut(s)	455
BseYI	CCCAGC	2 cut(s)	253, 415
Bsh1236I	CGCG	1 cut(s)	199
BshFI	GGCC	1 cut(s)	604
BsiHKAI	GWGCWC	1 cut(s)	117
BslFI	GGGAC	3 cut(s)	191, 220, 572
BslI	CCNNNNNNNGG	2 cut(s)	523, 631
BsmAI	GTCTC	1 cut(s)	577
BsmFI	GGGAC	3 cut(s)	191, 220, 572
BsnI	GGCC	1 cut(s)	604
Bsp1286I	GDGCHC	1 cut(s)	117
Bsp143I	GATC	7 cut(s)	72, 84, 97, 382, 390, 493, 552
BspANI	GGCC	1 cut(s)	604
BspCNI	CTCAG	3 cut(s)	118, 238, 374
BspFNI	CGCG	1 cut(s)	199
BspHI	TCATGA	1 cut(s)	207
BspLI	GGNNCC	2 cut(s)	22, 123
BspPI	GGATC	1 cut(s)	377
BsrI	ACTGG	1 cut(s)	326
BssECI	CCNNGG	2 cut(s)	237, 238
BssMI	GATC	7 cut(s)	72, 84, 97, 382, 390, 493, 552
Bst2UI	CCWGG	1 cut(s)	239
Bst6I	CTCTTC	1 cut(s)	107
BstC8I	GCNNGC	4 cut(s)	51, 55, 201, 357
BstDEI	CTNAG	4 cut(s)	126, 246, 361, 497
BstF5I	GGATG	2 cut(s)	87, 592
BstFNI	CGCG	1 cut(s)	199
BstKTI	GATC	7 cut(s)	75, 87, 100, 385, 393, 496, 555
BstMAI	GTCTC	1 cut(s)	577
BstMBI	GATC	7 cut(s)	72, 84, 97, 382, 390, 493, 552
BstNI	CCWGG	1 cut(s)	239
BstNSI	RCATGY	1 cut(s)	572
BstSCI	CCNGG	1 cut(s)	237
BstUI	CGCG	1 cut(s)	199
BstX2I	RGATCY	1 cut(s)	382
BstYI	RGATCY	1 cut(s)	382
BsuRI	GGCC	1 cut(s)	604
BtsCI	GGATG	2 cut(s)	87, 592
Cac8I	GCNNGC	4 cut(s)	51, 55, 201, 357
CciI	TCATGA	1 cut(s)	207
Cfr13I	GGNCC	1 cut(s)	121
CseI	GACGC	1 cut(s)	38
Csp6I	GTAC	2 cut(s)	243, 463
CviAII	CATG	2 cut(s)	208, 569
CviQI	GTAC	2 cut(s)	243, 463
DdeI	CTNAG	4 cut(s)	126, 246, 361, 497
DpnI	GATC	7 cut(s)	74, 86, 99, 384, 392, 495, 554
DpnII	GATC	7 cut(s)	72, 84, 97, 382, 390, 493, 552
DraIII	CACNNNGTG	2 cut(s)	44, 526
Eam1104I	CTCTTC	1 cut(s)	107
EarI	CTCTTC	1 cut(s)	107
Eco32I	GATATC	1 cut(s)	592
Eco47I	GGWCC	1 cut(s)	121
Eco57I	CTGAAG	2 cut(s)	363, 466
EcoO109I	RGGNCCY	1 cut(s)	121
EcoRII	CCWGG	1 cut(s)	237
EcoRV	GATATC	1 cut(s)	592
FaeI	CATG	2 cut(s)	211, 572
FaiI	YATR	8 cut(s)	18, 183, 192, 209, 438, 549, 551, 570
FaqI	GGGAC	3 cut(s)	191, 220, 572
FatI	CATG	2 cut(s)	207, 568
FauNDI	CATATG	1 cut(s)	549
FbaI	TGATCA	1 cut(s)	552
FblI	GTMKAC	2 cut(s)	27, 330
FokI	GGATG	2 cut(s)	74, 599
FspBI	CTAG	1 cut(s)	296
GsaI	CCCAGC	2 cut(s)	257, 419
GsuI	CTGGAG	2 cut(s)	309, 608
HaeIII	GGCC	1 cut(s)	604
HgaI	GACGC	1 cut(s)	38
Hin1II	CATG	2 cut(s)	211, 572
HincII	GTYRAC	1 cut(s)	28
HindII	GTYRAC	1 cut(s)	28
HinfI	GANTC	2 cut(s)	194, 315
HphI	GGTGA	2 cut(s)	19, 485
Hpy166II	GTNNAC	3 cut(s)	28, 331, 346
Hpy188I	TCNGA	1 cut(s)	382
Hpy188III	TCNNGA	3 cut(s)	170, 208, 398
Hpy8I	GTNNAC	3 cut(s)	28, 331, 346
Hpy99I	CGWCG	2 cut(s)	29, 32
HpyAV	CCTTC	5 cut(s)	4, 387, 415, 515, 535
HpyCH4V	TGCA	1 cut(s)	203
HpyF3I	CTNAG	4 cut(s)	126, 246, 361, 497
Hsp92II	CATG	2 cut(s)	211, 572
Ksp22I	TGATCA	1 cut(s)	552
Kzo9I	GATC	7 cut(s)	72, 84, 97, 382, 390, 493, 552
LmnI	GCTCC	3 cut(s)	26, 112, 544
MaeI	CTAG	1 cut(s)	296
MalI	GATC	7 cut(s)	74, 86, 99, 384, 392, 495, 554
MboI	GATC	7 cut(s)	72, 84, 97, 382, 390, 493, 552
MboII	GAAGA	2 cut(s)	94, 472
MfeI	CAATTG	1 cut(s)	264
MflI	RGATCY	1 cut(s)	382
MhlI	GDGCHC	1 cut(s)	117
MluCI	AATT	4 cut(s)	137, 227, 264, 641
MmeI	TCCRAC	1 cut(s)	408
MnlI	CCTC	9 cut(s)	143, 262, 269, 292, 333, 370, 433, 438, 632
MseI	TTAA	1 cut(s)	513
MspR9I	CCNGG	1 cut(s)	239
MunI	CAATTG	1 cut(s)	264
MvaI	CCWGG	1 cut(s)	239
MvnI	CGCG	1 cut(s)	199
NdeI	CATATG	1 cut(s)	549
NdeII	GATC	7 cut(s)	72, 84, 97, 382, 390, 493, 552
NlaIII	CATG	2 cut(s)	211, 572
NlaIV	GGNNCC	2 cut(s)	22, 123
NspI	RCATGY	1 cut(s)	572
PagI	TCATGA	1 cut(s)	207
PasI	CCCWGGG	1 cut(s)	238
PciI	ACATGT	1 cut(s)	568
PfeI	GAWTC	2 cut(s)	194, 315
PflMI	CCANNNNNTGG	1 cut(s)	523
PpuMI	RGGWCCY	1 cut(s)	121
PscI	ACATGT	1 cut(s)	568
Psp5II	RGGWCCY	1 cut(s)	121
Psp6I	CCWGG	1 cut(s)	237
PspFI	CCCAGC	2 cut(s)	253, 415
PspGI	CCWGG	1 cut(s)	237
PspN4I	GGNNCC	2 cut(s)	22, 123
PspPI	GGNCC	1 cut(s)	121
PspPPI	RGGWCCY	1 cut(s)	121
PsuI	RGATCY	1 cut(s)	382
RsaI	GTAC	2 cut(s)	244, 464
RsaNI	GTAC	2 cut(s)	243, 463
SalI	GTCGAC	1 cut(s)	26
SaqAI	TTAA	1 cut(s)	513
Sau3AI	GATC	7 cut(s)	72, 84, 97, 382, 390, 493, 552
Sau96I	GGNCC	1 cut(s)	121
ScaI	AGTACT	1 cut(s)	464
ScrFI	CCNGG	1 cut(s)	239
SduI	GDGCHC	1 cut(s)	117
SetI	ASST	6 cut(s)	15, 303, 417, 426, 507, 630
SgrDI	CGTCGACG	1 cut(s)	26
SinI	GGWCC	1 cut(s)	121
Sse9I	AATT	4 cut(s)	137, 227, 264, 641
SspMI	CTAG	1 cut(s)	296
StyD4I	CCNGG	1 cut(s)	237
TaqI	TCGA	2 cut(s)	27, 75
TasI	AATT	4 cut(s)	137, 227, 264, 641
TatI	WGTACW	1 cut(s)	462
TfiI	GAWTC	2 cut(s)	194, 315
Tru1I	TTAA	1 cut(s)	513
Tru9I	TTAA	1 cut(s)	513
TspDTI	ATGAA	1 cut(s)	207
TspGWI	ACGGA	2 cut(s)	13, 498
Van91I	CCANNNNNTGG	1 cut(s)	523
VpaK11BI	GGWCC	1 cut(s)	121
XapI	RAATTY	1 cut(s)	227
XceI	RCATGY	1 cut(s)	572
XmiI	GTMKAC	2 cut(s)	27, 330
XspI	CTAG	1 cut(s)	296
ZrmI	AGTACT	1 cut(s)	464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.