AT2G32430

Belongs to the glycosyltransferase 31 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0005984
Physical Location & Seq
Forward (+)
13771296 .. 13774502
3207 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G32430.1

Sequence Viewer

Length: 1230 bp
ATGTCGACGAAGATCAAAGGAGAGCTTTTTCCCTCCAGAAGTTTAGTATCTAAAAAATGGACATTTTTACTCTGCTTTGGGAGCTTCTGCTTCGGAATATTATTCACCGATAGGATGTGGATTATTCCGGAGTCTAAAGACATGCCTCGACCATCTGTAAGTACAGAAGCTGAAAGATTGAAGCTGATCTCTGAGGGCTGTGATCCGAAAACCCTCTACCAGAAAGAAGTAAATCGTGATCCTCAGGCATTGTTTGGAGAAGTTTCCAAGACTCATAACGCTATACAGACATTGGATAAGACTATTTCAAGCTTAGAGATGGAGTTAGCTGCAGCAAGATCGGCTCAGGAGTCTTTAGTAAACGGTGCTCCTATATCTAATGATATGGAGAAGAAGCAATTACCGGGGAAAAGACGGTATTTGATGGTTGTAGGGATTAATACTGCTTTTAGTAGCCGAAAGAGAAGAGATTCTGTTCGAACAACTTGGATGCCTTCAGGTGAGAAAAGAAAGAAGTTGGAAGAAGAGAAGGGAATTATTATACGGTTTGTGATTGGTCATAGTGCCACGGCTGGCGGAATTCTAGACCGATCCATTGAAGCAGAGGACAAGAAGCATGGAGATTTCTTGAGATTGGACCATGTTGAAGGATACCTTGAGTTATCAGGCAAAACGAAAACATATTTTTCTACAGCTGTTTCGAAGTGGGATGCAGAGTTCTATGTCAAAGTAGATGATGATGTTCATGTAAATATCGCAACTCTTGGGGAAACTCTTGTTAGACACAGGAAGAAACATCGAGTCTATCTCGGCTGCATGAAATCTGGTCCAGTACTATCTCAAAAAGGAGTTAGATACCATGAGCCTGAGTATTGGAAATTTGGTGAGAATGGAAACAAGTACTTCCGTCACGCTACTGGACAGTTATACGCCATTTCTAGAGACTTGGCTTCTTACATTTCCCTTAATCAGCATGTTCTGCACAAATATGCAAATGAGGATGTTACATTAGGTGCTTGGTTTATCGGGCTTGATGTGACACATATCGATGATAGAAGACTATGTTGTGGCACTCCTCCTGATTGTGAATGGAAGGCACAAGCAGGCAACATATGTGTAGCTTCATTCGACTGGACGTGTAGCGGTATCTGCAGATCAGCTGATCGGATAAAAGAGGTTCACAAGCGATGTGGTGAACCGGAAAACGCTATTTGGAAAGCCAGATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4094 Galactosyl_T

Protein Analysis

409

Amino Acids

46.48

Weight (kDa)

9.01

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4094 PF13334 17 - 115 3.4e-35 Domain of unknown function (DUF4094)
Galactosyl_T PF01762 154 - 351 2.7e-51 Galactosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 5
AccIII TCCGGA 1 cut(s) 127
AciI CCGC 2 cut(s) 576, 1143
AclWI GGATC 3 cut(s) 197, 233, 585
AcsI RAATTY 2 cut(s) 579, 878
AcuI CTGAAG 1 cut(s) 480
AfaI GTAC 3 cut(s) 163, 834, 902
AflIII ACRYGT 1 cut(s) 1136
AgsI TTSAA 4 cut(s) 181, 309, 599, 647
AjiI CACGTC 1 cut(s) 1137
AloI GAACNNNNNNTCC 2 cut(s) 701, 733
AluBI AGCT 9 cut(s) 25, 84, 170, 184, 312, 329, 695, 1121, 1160
AluI AGCT 9 cut(s) 25, 84, 170, 184, 312, 329, 695, 1121, 1160
Alw21I GWGCWC 1 cut(s) 370
Alw26I GTCTC 1 cut(s) 936
AlwI GGATC 3 cut(s) 197, 233, 585
AlwNI CAGNNNCTG 1 cut(s) 170
Aor13HI TCCGGA 1 cut(s) 127
ApeKI GCWGC 3 cut(s) 329, 332, 813
ApoI RAATTY 2 cut(s) 579, 878
AseI ATTAAT 1 cut(s) 438
Asp700I GAANNNNTTC 1 cut(s) 469
AspS9I GGNCC 2 cut(s) 637, 827
AsuC2I CCSGG 1 cut(s) 405
AsuHPI GGTGA 4 cut(s) 97, 512, 896, 1205
AsuII TTCGAA 2 cut(s) 478, 701
AvaII GGWCC 2 cut(s) 637, 827
AxyI CCTNAGG 1 cut(s) 243
BbsI GAAGAC 1 cut(s) 1063
Bbv12I GWGCWC 1 cut(s) 370
BbvI GCAGC 3 cut(s) 316, 344, 800
BccI CCATC 3 cut(s) 160, 313, 418
BceAI ACGGC 1 cut(s) 585
BcgI CGANNNNNNTGC 2 cut(s) 321, 355
BciVI GTATCC 1 cut(s) 644
BcnI CCSGG 1 cut(s) 405
BcoDI GTCTC 1 cut(s) 936
BfaI CTAG 2 cut(s) 584, 939
BfmI CTRYAG 3 cut(s) 330, 690, 1150
BfuI GTATCC 1 cut(s) 644
BisI GCNGC 3 cut(s) 330, 333, 814
BlsI GCNGC 3 cut(s) 331, 334, 815
BmcAI AGTACT 2 cut(s) 834, 902
Bme1390I CCNGG 1 cut(s) 405
Bme18I GGWCC 2 cut(s) 637, 827
BmgBI CACGTC 1 cut(s) 1137
BmgT120I GGNCC 2 cut(s) 637, 827
BmrFI CCNGG 1 cut(s) 405
BmsI GCATC 2 cut(s) 480, 700
BpiI GAAGAC 1 cut(s) 1063
BplI GAGNNNNNCTC 2 cut(s) 792, 824
BpmI CTGGAG 1 cut(s) 19
Bpu10I CCTNAGC 1 cut(s) 345
Bpu14I TTCGAA 2 cut(s) 478, 701
BpuEI CTTGAG 2 cut(s) 649, 677
BpuMI CCSGG 1 cut(s) 405
Bsa29I ATCGAT 1 cut(s) 1047
BsaJI CCNNGG 2 cut(s) 404, 567
BsaWI WCCGGW 2 cut(s) 127, 1198
Bse1I ACTGG 3 cut(s) 830, 922, 1136
Bse21I CCTNAGG 1 cut(s) 243
BseAI TCCGGA 1 cut(s) 127
BseCI ATCGAT 1 cut(s) 1047
BseDI CCNNGG 2 cut(s) 404, 567
BseGI GGATG 4 cut(s) 120, 495, 715, 1006
BseMII CTCAG 4 cut(s) 183, 257, 359, 858
BseNI ACTGG 3 cut(s) 830, 922, 1136
BseRI GAGGAG 1 cut(s) 1065
BseXI GCAGC 3 cut(s) 316, 344, 800
BsgI GTGCAG 1 cut(s) 965
BshVI ATCGAT 1 cut(s) 1047
BsiHKAI GWGCWC 1 cut(s) 370
BsiSI CCGG 3 cut(s) 128, 404, 1199
BsmAI GTCTC 1 cut(s) 936
Bsp119I TTCGAA 2 cut(s) 478, 701
Bsp1286I GDGCHC 1 cut(s) 370
Bsp13I TCCGGA 1 cut(s) 127
Bsp143I GATC 8 cut(s) 12, 186, 202, 238, 338, 590, 1154, 1162
BspACI CCGC 2 cut(s) 576, 1143
BspCNI CTCAG 4 cut(s) 184, 256, 358, 859
BspDI ATCGAT 1 cut(s) 1047
BspEI TCCGGA 1 cut(s) 127
BspMAI CTGCAG 2 cut(s) 334, 1154
BspPI GGATC 3 cut(s) 197, 233, 585
BspT104I TTCGAA 2 cut(s) 478, 701
BsrI ACTGG 3 cut(s) 830, 922, 1136
BssECI CCNNGG 2 cut(s) 404, 567
BssMI GATC 8 cut(s) 12, 186, 202, 238, 338, 590, 1154, 1162
Bst4CI ACNGT 4 cut(s) 365, 417, 546, 924
Bst6I CTCTTC 2 cut(s) 460, 519
BstAPI GCANNNNNTGC 1 cut(s) 979
BstBI TTCGAA 2 cut(s) 478, 701
BstC8I GCNNGC 2 cut(s) 574, 1105
BstDEI CTNAG 5 cut(s) 192, 243, 313, 345, 867
BstDSI CCRYGG 1 cut(s) 567
BstF5I GGATG 4 cut(s) 120, 495, 715, 1006
BstKTI GATC 8 cut(s) 15, 189, 205, 241, 341, 593, 1157, 1165
BstMAI GTCTC 1 cut(s) 936
BstMBI GATC 8 cut(s) 12, 186, 202, 238, 338, 590, 1154, 1162
BstMWI GCNNNNNNNGC 4 cut(s) 81, 341, 979, 1149
BstNSI RCATGY 2 cut(s) 145, 977
BstSCI CCNGG 1 cut(s) 403
BstSFI CTRYAG 3 cut(s) 330, 690, 1150
BstV1I GCAGC 3 cut(s) 316, 344, 800
BstV2I GAAGAC 1 cut(s) 1063
Bsu15I ATCGAT 1 cut(s) 1047
Bsu36I CCTNAGG 1 cut(s) 243
BsuI GTATCC 1 cut(s) 644
BsuTUI ATCGAT 1 cut(s) 1047
BtgI CCRYGG 1 cut(s) 567
BtgZI GCGATG 1 cut(s) 1201
BtrI CACGTC 1 cut(s) 1137
BtsCI GGATG 4 cut(s) 120, 495, 715, 1006
Cac8I GCNNGC 2 cut(s) 574, 1105
CaiI CAGNNNCTG 1 cut(s) 170
Cfr13I GGNCC 2 cut(s) 637, 827
ClaI ATCGAT 1 cut(s) 1047
Csp6I GTAC 3 cut(s) 162, 833, 901
CspCI CAANNNNNGTGG 2 cut(s) 1171, 1206
CviAII CATG 7 cut(s) 142, 617, 641, 746, 817, 860, 974
CviQI GTAC 3 cut(s) 162, 833, 901
DdeI CTNAG 5 cut(s) 192, 243, 313, 345, 867
DpnI GATC 8 cut(s) 14, 188, 204, 240, 340, 592, 1156, 1164
DpnII GATC 8 cut(s) 12, 186, 202, 238, 338, 590, 1154, 1162
Eam1104I CTCTTC 2 cut(s) 460, 519
EarI CTCTTC 2 cut(s) 460, 519
EciI GGCGGA 1 cut(s) 591
Eco47I GGWCC 2 cut(s) 637, 827
Eco57I CTGAAG 1 cut(s) 480
Eco81I CCTNAGG 1 cut(s) 243
EcoRI GAATTC 1 cut(s) 579
FaeI CATG 7 cut(s) 145, 620, 644, 749, 820, 863, 977
FalI AAGNNNNNCTT 4 cut(s) 9, 41, 639, 671
FatI CATG 7 cut(s) 141, 616, 640, 745, 816, 859, 973
FauNDI CATATG 1 cut(s) 1112
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 3 cut(s) 330, 333, 814
FokI GGATG 4 cut(s) 127, 502, 722, 1013
Fsp4HI GCNGC 3 cut(s) 330, 333, 814
FspBI CTAG 2 cut(s) 584, 939
GluI GCNGC 3 cut(s) 330, 333, 814
GsuI CTGGAG 1 cut(s) 19
HapII CCGG 3 cut(s) 128, 404, 1199
Hin1II CATG 7 cut(s) 145, 620, 644, 749, 820, 863, 977
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 310
HinfI GANTC 5 cut(s) 131, 271, 350, 470, 801
HpaII CCGG 3 cut(s) 128, 404, 1199
HphI GGTGA 4 cut(s) 97, 512, 896, 1205
Hpy166II GTNNAC 4 cut(s) 6, 361, 1180, 1196
Hpy188I TCNGA 4 cut(s) 95, 193, 207, 1167
Hpy188III TCNNGA 8 cut(s) 36, 128, 236, 347, 584, 628, 939, 1079
Hpy8I GTNNAC 4 cut(s) 6, 361, 1180, 1196
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 4 cut(s) 504, 523, 641, 1087
HpyCH4III ACNGT 4 cut(s) 365, 417, 546, 924
HpyCH4IV ACGT 1 cut(s) 1136
HpyCH4V TGCA 6 cut(s) 332, 713, 816, 982, 992, 1152
HpyF10VI GCNNNNNNNGC 4 cut(s) 81, 341, 979, 1149
HpyF3I CTNAG 5 cut(s) 192, 243, 313, 345, 867
HpySE526I ACGT 1 cut(s) 1136
Hsp92II CATG 7 cut(s) 145, 620, 644, 749, 820, 863, 977
Kpn2I TCCGGA 1 cut(s) 127
Kzo9I GATC 8 cut(s) 12, 186, 202, 238, 338, 590, 1154, 1162
LmnI GCTCC 2 cut(s) 81, 373
Lsp1109I GCAGC 3 cut(s) 316, 344, 800
LweI GCATC 2 cut(s) 480, 700
MaeI CTAG 2 cut(s) 584, 939
MaeII ACGT 1 cut(s) 1136
MaeIII GTNAC 3 cut(s) 908, 1003, 1036
MalI GATC 8 cut(s) 14, 188, 204, 240, 340, 592, 1156, 1164
MboI GATC 8 cut(s) 12, 186, 202, 238, 338, 590, 1154, 1162
MboII GAAGA 7 cut(s) 22, 403, 477, 533, 536, 802, 1068
MhlI GDGCHC 1 cut(s) 370
MluCI AATT 4 cut(s) 398, 534, 579, 878
MlyI GAGTC 4 cut(s) 140, 265, 359, 810
MmeI TCCRAC 1 cut(s) 498
MnlI CCTC 9 cut(s) 43, 156, 187, 224, 252, 598, 991, 1086, 1168
MroI TCCGGA 1 cut(s) 127
MroXI GAANNNNTTC 1 cut(s) 469
MseI TTAA 2 cut(s) 438, 966
MslI CAYNNNNRTG 2 cut(s) 987, 1047
MspA1I CMGCKG 2 cut(s) 695, 1160
MspI CCGG 3 cut(s) 128, 404, 1199
MspR9I CCNGG 1 cut(s) 405
MwoI GCNNNNNNNGC 4 cut(s) 81, 341, 979, 1149
NciI CCSGG 1 cut(s) 405
NdeI CATATG 1 cut(s) 1112
NdeII GATC 8 cut(s) 12, 186, 202, 238, 338, 590, 1154, 1162
NlaIII CATG 7 cut(s) 145, 620, 644, 749, 820, 863, 977
NmeAIII GCCGAG 1 cut(s) 789
NmuCI GTSAC 2 cut(s) 908, 1036
NspI RCATGY 2 cut(s) 145, 977
NspV TTCGAA 2 cut(s) 478, 701
PdmI GAANNNNTTC 1 cut(s) 469
PfeI GAWTC 1 cut(s) 470
PkrI GCNGC 3 cut(s) 331, 334, 815
PleI GAGTC 4 cut(s) 139, 265, 358, 809
PpsI GAGTC 4 cut(s) 139, 265, 358, 809
PshBI ATTAAT 1 cut(s) 438
PspPI GGNCC 2 cut(s) 637, 827
PstI CTGCAG 2 cut(s) 334, 1154
PstNI CAGNNNCTG 1 cut(s) 170
PvuII CAGCTG 2 cut(s) 695, 1160
RsaI GTAC 3 cut(s) 163, 834, 902
RsaNI GTAC 3 cut(s) 162, 833, 901
RseI CAYNNNNRTG 2 cut(s) 987, 1047
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 2 cut(s) 438, 966
SatI GCNGC 3 cut(s) 330, 333, 814
Sau3AI GATC 8 cut(s) 12, 186, 202, 238, 338, 590, 1154, 1162
Sau96I GGNCC 2 cut(s) 637, 827
ScaI AGTACT 2 cut(s) 834, 902
SchI GAGTC 4 cut(s) 140, 265, 359, 810
ScrFI CCNGG 1 cut(s) 405
SduI GDGCHC 1 cut(s) 370
SfaNI GCATC 2 cut(s) 480, 700
SfcI CTRYAG 3 cut(s) 330, 690, 1150
SfuI TTCGAA 2 cut(s) 478, 701
SinI GGWCC 2 cut(s) 637, 827
SmiMI CAYNNNNRTG 2 cut(s) 987, 1047
SmlI CTYRAG 2 cut(s) 628, 656
SmoI CTYRAG 2 cut(s) 628, 656
Sse9I AATT 4 cut(s) 398, 534, 579, 878
SsiI CCGC 2 cut(s) 576, 1143
SspI AATATT 1 cut(s) 99
SspMI CTAG 2 cut(s) 584, 939
StyD4I CCNGG 1 cut(s) 403
TaaI ACNGT 4 cut(s) 365, 417, 546, 924
TaiI ACGT 1 cut(s) 1139
TaqI TCGA 7 cut(s) 5, 148, 478, 701, 799, 1047, 1128
TaqII GACCGA 1 cut(s) 603
TasI AATT 4 cut(s) 398, 534, 579, 878
TatI WGTACW 3 cut(s) 161, 832, 900
TfiI GAWTC 1 cut(s) 470
Tru1I TTAA 2 cut(s) 438, 966
Tru9I TTAA 2 cut(s) 438, 966
TseFI GTSAC 2 cut(s) 908, 1036
TseI GCWGC 3 cut(s) 329, 332, 813
Tsp45I GTSAC 2 cut(s) 908, 1036
TspDTI ATGAA 3 cut(s) 734, 833, 1113
TspGWI ACGGA 1 cut(s) 896
VpaK11BI GGWCC 2 cut(s) 637, 827
VspI ATTAAT 1 cut(s) 438
XapI RAATTY 2 cut(s) 579, 878
XbaI TCTAGA 2 cut(s) 583, 938
XceI RCATGY 2 cut(s) 145, 977
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 469
XspI CTAG 2 cut(s) 584, 939
ZrmI AGTACT 2 cut(s) 834, 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.