AT2G35530
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
14922836 .. 14926609
3774 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G35530.1

Sequence Viewer

Length: 1230 bp
ATGGCTAGCAATGAGATGGAAAAATCGAGTAAAGAGAAGGAACCTAAAACACCTCCTCCTTCTTCTACTGCCCCTCCCTCTTCACAGGAACCTTCATCGGCTGTGAGTGCTGGCATGGCTACTCCAGATTGGTCTGGTTTTCAGGCATATTCTCCTATGCCGCCGCCTCATGGTTATGTGGCATCTAGTCCCCAACCTCACCCTTATATGTGGGGAGTTCAGCATATGATGCCTCCTTATGGAACTCCGCCTCATCCTTATGTTGCAATGTATCCCCCAGGTGGCATGTACGCACATCCTTCAATGCCTCCGGGTTCTTATCCCTATAGCCCTTATGCTATGCCTTCTCCAAATGGAATGACTGAAGTTTCTGGCAATACTACAGGCGGCACTGATGGTGATGCTAAACAATCTGAAGTGAAGGAAAAATTGCCCATCAAAAGATCAAGAGGAAGCTTGGGAAGTTTGAACATGATTACAGGAAAGAACAATGAACCTGGGAAAAACTCAGGAGCATCAGCTAATGGAGCTTACTCCAAAAGTGGGGAGAGTGCTTCTGATGGTTCAAGTGAAGGAAGTGATGGGAACTCTCAAAATGATTCGGGATCTGGACTAGATGGAAAGGATGCTGAAGCAGCATCAGAGAATGGTGGTTCTGCCAATGGTCCGCAAAATGGAAGTGCTGGTACACCTATTCTACCGGTGAGCCAGACCGTACCAATCATGCCAATGACAGCTGCAGGTGTTCCTGGCCCACCAACAAATTTAAATATTGGGATGGATTACTGGGGTGCTCCAACTTCAGCTGGTATCCCTGGAATGCATGGGAAAGTATCTACACCAGTTCCTGGAGTTGTTGCTCCAGGCTCGCGAGATGGTGGCCATTCACAACCCTGGTTACAGGACGATAGAGAACTTAAGCGACAGAGACGGAAGCAGTCCAATAGGGAGTCTGCTCGAAGATCAAGGTTGCGTAAACAGGCCGAATGTGATGAGCTGGCCCAACGCGCTGAGGTGTTGAACGAAGAAAACACAAATCTCAGAGCAGAAATCAACAAGCTCAAAAGCCAATGCGAAGAGCTTACCACCGAGAACACCTCTCTCAAGGACCAACTTTCATTATTCCCTCCACTTGAAGGCATAAGCATGGACAATGACCACCAAGAACCAGACACCAATCAAACAGGTGCCGCAGAGAGAAAGGTTGATTCATACAAAGACTCAACGTGA

Protein Analysis

409

Amino Acids

43.11

Weight (kDa)

5.39

Isoelectric Point (pI)

60.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFMR PF07777 1 - 103 2.5e-27 G-box binding protein MFMR
MFMR_assoc PF16596 142 - 272 2.2e-47 Disordered region downstream of MFMR
bZIP_1 PF00170 304 - 365 2.9e-20 bZIP transcription factor
bZIP_2 PF07716 305 - 355 5.7e-07 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 731
Acc36I ACCTGC 1 cut(s) 731
AccB1I GGYRCC 1 cut(s) 1187
AccB7I CCANNNNNTGG 1 cut(s) 848
AccII CGCG 2 cut(s) 871, 1008
AciI CCGC 6 cut(s) 161, 164, 248, 387, 668, 1191
AclWI GGATC 1 cut(s) 613
AcoI YGGCCR 1 cut(s) 880
AcsI RAATTY 1 cut(s) 763
AcuI CTGAAG 4 cut(s) 384, 435, 651, 786
AfaI GTAC 3 cut(s) 290, 688, 717
AfiI CCNNNNNNNGG 7 cut(s) 170, 239, 281, 543, 674, 848, 1136
AflII CTTAAG 1 cut(s) 917
AgeI ACCGGT 1 cut(s) 700
AgsI TTSAA 5 cut(s) 303, 469, 567, 1021, 1136
AjnI CCWGG 7 cut(s) 277, 496, 748, 814, 847, 862, 893
AluBI AGCT 8 cut(s) 456, 521, 530, 737, 806, 997, 1060, 1081
AluI AGCT 8 cut(s) 456, 521, 530, 737, 806, 997, 1060, 1081
Alw21I GWGCWC 1 cut(s) 796
Alw26I GTCTC 1 cut(s) 922
AlwI GGATC 1 cut(s) 613
AlwNI CAGNNNCTG 1 cut(s) 848
AoxI GGCC 4 cut(s) 751, 880, 981, 999
ApeKI GCWGC 2 cut(s) 635, 737
ApoI RAATTY 1 cut(s) 763
AsiGI ACCGGT 1 cut(s) 700
AspLEI GCGC 1 cut(s) 1010
AspS9I GGNCC 4 cut(s) 665, 752, 1000, 1108
AsuC2I CCSGG 1 cut(s) 312
AsuHPI GGTGA 3 cut(s) 191, 410, 715
AsuNHI GCTAGC 1 cut(s) 5
AvaII GGWCC 2 cut(s) 665, 1108
BalI TGGCCA 1 cut(s) 882
BanI GGYRCC 1 cut(s) 1187
BarI GAAGNNNNNNTAC 2 cut(s) 670, 702
Bbv12I GWGCWC 1 cut(s) 796
BbvCI CCTCAGC 1 cut(s) 1011
BbvI GCAGC 2 cut(s) 647, 724
BccI CCATC 8 cut(s) 10, 389, 443, 554, 575, 611, 772, 869
BciT130I CCWGG 7 cut(s) 279, 498, 750, 816, 849, 864, 895
BciVI GTATCC 2 cut(s) 282, 821
BcnI CCSGG 1 cut(s) 312
BcoDI GTCTC 1 cut(s) 922
BfaI CTAG 3 cut(s) 6, 186, 614
BfmI CTRYAG 3 cut(s) 325, 381, 738
BfrI CTTAAG 1 cut(s) 917
BfuAI ACCTGC 1 cut(s) 731
BfuI GTATCC 2 cut(s) 282, 821
BisI GCNGC 6 cut(s) 161, 164, 388, 636, 738, 1191
BlsI GCNGC 6 cut(s) 162, 165, 389, 637, 739, 1192
Bme1390I CCNGG 8 cut(s) 279, 312, 498, 750, 816, 849, 864, 895
Bme18I GGWCC 2 cut(s) 665, 1108
BmgT120I GGNCC 4 cut(s) 665, 752, 1000, 1108
BmiI GGNNCC 3 cut(s) 42, 90, 1189
BmrFI CCNGG 8 cut(s) 279, 312, 498, 750, 816, 849, 864, 895
BmrI ACTGGG 1 cut(s) 796
BmsI GCATC 6 cut(s) 191, 219, 391, 524, 616, 647
BmtI GCTAGC 1 cut(s) 9
BmuI ACTGGG 1 cut(s) 796
BplI GAGNNNNNCTC 2 cut(s) 1082, 1114
BpmI CTGGAG 3 cut(s) 108, 846, 870
Bpu10I CCTNAGC 1 cut(s) 1011
BpuEI CTTGAG 1 cut(s) 1088
BpuMI CCSGG 1 cut(s) 312
BsaJI CCNNGG 4 cut(s) 277, 497, 814, 893
BsaWI WCCGGW 1 cut(s) 700
BsaXI ACNNNNNCTCC 4 cut(s) 40, 58, 70, 88
Bsc4I CCNNNNNNNGG 7 cut(s) 170, 239, 281, 543, 674, 848, 1136
Bse118I RCCGGY 1 cut(s) 700
Bse1I ACTGG 2 cut(s) 791, 842
Bse3DI GCAATG 2 cut(s) 16, 273
BseBI CCWGG 7 cut(s) 279, 498, 750, 816, 849, 864, 895
BseDI CCNNGG 4 cut(s) 277, 497, 814, 893
BseGI GGATG 4 cut(s) 253, 295, 631, 783
BseLI CCNNNNNNNGG 7 cut(s) 170, 239, 281, 543, 674, 848, 1136
BseMI GCAATG 2 cut(s) 16, 273
BseMII CTCAG 3 cut(s) 522, 1002, 1054
BseNI ACTGG 2 cut(s) 791, 842
BseRI GAGGAG 1 cut(s) 45
BseXI GCAGC 2 cut(s) 647, 724
Bsh1236I CGCG 2 cut(s) 871, 1008
BshFI GGCC 4 cut(s) 753, 882, 983, 1001
BshNI GGYRCC 1 cut(s) 1187
BshTI ACCGGT 1 cut(s) 700
BsiHKAI GWGCWC 1 cut(s) 796
BsiSI CCGG 2 cut(s) 311, 701
BslFI GGGAC 1 cut(s) 174
BslI CCNNNNNNNGG 7 cut(s) 170, 239, 281, 543, 674, 848, 1136
BsmAI GTCTC 1 cut(s) 922
BsmBI CGTCTC 1 cut(s) 922
BsmFI GGGAC 1 cut(s) 174
BsmI GAATGC 1 cut(s) 825
BsnI GGCC 4 cut(s) 753, 882, 983, 1001
Bsp1286I GDGCHC 1 cut(s) 796
Bsp143I GATC 3 cut(s) 443, 605, 962
Bsp68I TCGCGA 1 cut(s) 871
BspACI CCGC 6 cut(s) 161, 164, 248, 387, 668, 1191
BspANI GGCC 4 cut(s) 753, 882, 983, 1001
BspCNI CTCAG 3 cut(s) 521, 1003, 1053
BspFNI CGCG 2 cut(s) 871, 1008
BspLI GGNNCC 3 cut(s) 42, 90, 1189
BspMAI CTGCAG 1 cut(s) 742
BspMI ACCTGC 1 cut(s) 731
BspOI GCTAGC 1 cut(s) 9
BspPI GGATC 1 cut(s) 613
BspQI GCTCTTC 1 cut(s) 1071
BspT107I GGYRCC 1 cut(s) 1187
BspTI CTTAAG 1 cut(s) 917
BsrDI GCAATG 2 cut(s) 16, 273
BsrFI RCCGGY 1 cut(s) 700
BsrI ACTGG 2 cut(s) 791, 842
BssAI RCCGGY 1 cut(s) 700
BssECI CCNNGG 4 cut(s) 277, 497, 814, 893
BssMI GATC 3 cut(s) 443, 605, 962
Bst2UI CCWGG 7 cut(s) 279, 498, 750, 816, 849, 864, 895
Bst4CI ACNGT 1 cut(s) 715
Bst6I CTCTTC 2 cut(s) 85, 1071
BstAFI CTTAAG 1 cut(s) 917
BstAPI GCANNNNNTGC 1 cut(s) 229
BstC8I GCNNGC 4 cut(s) 7, 112, 869, 999
BstDEI CTNAG 3 cut(s) 508, 1011, 1040
BstF5I GGATG 4 cut(s) 253, 295, 631, 783
BstFNI CGCG 2 cut(s) 871, 1008
BstHHI GCGC 1 cut(s) 1010
BstKTI GATC 3 cut(s) 446, 608, 965
BstMAI GTCTC 1 cut(s) 922
BstMBI GATC 3 cut(s) 443, 605, 962
BstMWI GCNNNNNNNGC 6 cut(s) 107, 116, 229, 527, 635, 1007
BstNI CCWGG 7 cut(s) 279, 498, 750, 816, 849, 864, 895
BstNSI RCATGY 1 cut(s) 289
BstSCI CCNGG 8 cut(s) 277, 310, 496, 748, 814, 847, 862, 893
BstSFI CTRYAG 3 cut(s) 325, 381, 738
BstUI CGCG 2 cut(s) 871, 1008
BstV1I GCAGC 2 cut(s) 647, 724
BstX2I RGATCY 1 cut(s) 605
BstYI RGATCY 1 cut(s) 605
BsuI GTATCC 2 cut(s) 282, 821
BsuRI GGCC 4 cut(s) 753, 882, 983, 1001
BtsCI GGATG 4 cut(s) 253, 295, 631, 783
BtsIMutI CAGTG 1 cut(s) 390
BtuMI TCGCGA 1 cut(s) 871
BveI ACCTGC 1 cut(s) 731
Cac8I GCNNGC 4 cut(s) 7, 112, 869, 999
CaiI CAGNNNCTG 1 cut(s) 848
CfoI GCGC 1 cut(s) 1010
Cfr10I RCCGGY 1 cut(s) 700
Cfr13I GGNCC 4 cut(s) 665, 752, 1000, 1108
Csp6I GTAC 3 cut(s) 289, 687, 716
CspAI ACCGGT 1 cut(s) 700
CviAII CATG 7 cut(s) 115, 170, 286, 472, 724, 824, 1147
CviQI GTAC 3 cut(s) 289, 687, 716
DdeI CTNAG 3 cut(s) 508, 1011, 1040
DpnI GATC 3 cut(s) 445, 607, 964
DpnII GATC 3 cut(s) 443, 605, 962
DraI TTTAAA 1 cut(s) 768
EaeI YGGCCR 1 cut(s) 880
Eam1104I CTCTTC 2 cut(s) 85, 1071
EarI CTCTTC 2 cut(s) 85, 1071
EciI GGCGGA 1 cut(s) 237
Eco47I GGWCC 2 cut(s) 665, 1108
Eco57I CTGAAG 4 cut(s) 384, 435, 651, 786
EcoRII CCWGG 7 cut(s) 277, 496, 748, 814, 847, 862, 893
EcoT22I ATGCAT 1 cut(s) 825
Esp3I CGTCTC 1 cut(s) 922
FaeI CATG 7 cut(s) 118, 173, 289, 475, 727, 827, 1150
FaqI GGGAC 1 cut(s) 174
FatI CATG 7 cut(s) 114, 169, 285, 471, 723, 823, 1146
FauNDI CATATG 1 cut(s) 225
Fnu4HI GCNGC 6 cut(s) 161, 164, 388, 636, 738, 1191
FokI GGATG 4 cut(s) 240, 282, 638, 790
Fsp4HI GCNGC 6 cut(s) 161, 164, 388, 636, 738, 1191
FspBI CTAG 3 cut(s) 6, 186, 614
GlaI GCGC 1 cut(s) 1009
GluI GCNGC 6 cut(s) 161, 164, 388, 636, 738, 1191
GsuI CTGGAG 3 cut(s) 108, 846, 870
HaeIII GGCC 4 cut(s) 753, 882, 983, 1001
HapII CCGG 2 cut(s) 311, 701
HhaI GCGC 1 cut(s) 1010
Hin1II CATG 7 cut(s) 118, 173, 289, 475, 727, 827, 1150
Hin6I GCGC 1 cut(s) 1008
HinP1I GCGC 1 cut(s) 1008
HindIII AAGCTT 1 cut(s) 454
HinfI GANTC 4 cut(s) 599, 950, 1208, 1220
HpaII CCGG 2 cut(s) 311, 701
HphI GGTGA 3 cut(s) 191, 410, 715
Hpy166II GTNNAC 2 cut(s) 689, 977
Hpy188I TCNGA 4 cut(s) 415, 559, 643, 1043
Hpy188III TCNNGA 6 cut(s) 125, 447, 510, 603, 609, 870
Hpy8I GTNNAC 2 cut(s) 689, 977
HpyAV CCTTC 8 cut(s) 31, 69, 102, 309, 354, 415, 566, 1130
HpyCH4III ACNGT 1 cut(s) 715
HpyCH4IV ACGT 1 cut(s) 1226
HpyCH4V TGCA 3 cut(s) 266, 740, 823
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 116, 229, 527, 635, 1007
HpyF3I CTNAG 3 cut(s) 508, 1011, 1040
HpySE526I ACGT 1 cut(s) 1226
Hsp92II CATG 7 cut(s) 118, 173, 289, 475, 727, 827, 1150
HspAI GCGC 1 cut(s) 1008
Kzo9I GATC 3 cut(s) 443, 605, 962
LguI GCTCTTC 1 cut(s) 1071
LmnI GCTCC 4 cut(s) 512, 527, 799, 865
Lsp1109I GCAGC 2 cut(s) 647, 724
LweI GCATC 6 cut(s) 191, 219, 391, 524, 616, 647
MaeI CTAG 3 cut(s) 6, 186, 614
MaeII ACGT 1 cut(s) 1226
MaeIII GTNAC 1 cut(s) 897
MalI GATC 3 cut(s) 445, 607, 964
MboI GATC 3 cut(s) 443, 605, 962
MboII GAAGA 5 cut(s) 54, 72, 972, 1037, 1088
MflI RGATCY 1 cut(s) 605
MhlI GDGCHC 1 cut(s) 796
MlsI TGGCCA 1 cut(s) 882
MluCI AATT 2 cut(s) 428, 763
MluNI TGGCCA 1 cut(s) 882
MlyI GAGTC 2 cut(s) 959, 1214
MmeI TCCRAC 1 cut(s) 821
Mox20I TGGCCA 1 cut(s) 882
Mph1103I ATGCAT 1 cut(s) 825
MscI TGGCCA 1 cut(s) 882
MseI TTAA 2 cut(s) 767, 918
MslI CAYNNNNRTG 4 cut(s) 174, 258, 728, 1145
Msp20I TGGCCA 1 cut(s) 882
MspA1I CMGCKG 2 cut(s) 737, 806
MspCI CTTAAG 1 cut(s) 917
MspI CCGG 2 cut(s) 311, 701
MspR9I CCNGG 8 cut(s) 279, 312, 498, 750, 816, 849, 864, 895
Mva1269I GAATGC 1 cut(s) 825
MvaI CCWGG 7 cut(s) 279, 498, 750, 816, 849, 864, 895
MvnI CGCG 2 cut(s) 871, 1008
MwoI GCNNNNNNNGC 6 cut(s) 107, 116, 229, 527, 635, 1007
NciI CCSGG 1 cut(s) 312
NdeI CATATG 1 cut(s) 225
NdeII GATC 3 cut(s) 443, 605, 962
NheI GCTAGC 1 cut(s) 5
NlaIII CATG 7 cut(s) 118, 173, 289, 475, 727, 827, 1150
NlaIV GGNNCC 3 cut(s) 42, 90, 1189
NruI TCGCGA 1 cut(s) 871
NsiI ATGCAT 1 cut(s) 825
NspI RCATGY 1 cut(s) 289
PaqCI CACCTGC 1 cut(s) 731
PciSI GCTCTTC 1 cut(s) 1071
PctI GAATGC 1 cut(s) 825
PfeI GAWTC 2 cut(s) 599, 1208
PflMI CCANNNNNTGG 1 cut(s) 848
PfoI TCCNGGA 1 cut(s) 847
PinAI ACCGGT 1 cut(s) 700
PkrI GCNGC 6 cut(s) 162, 165, 389, 637, 739, 1192
PleI GAGTC 2 cut(s) 958, 1214
PpsI GAGTC 2 cut(s) 958, 1214
Psp6I CCWGG 7 cut(s) 277, 496, 748, 814, 847, 862, 893
PspGI CCWGG 7 cut(s) 277, 496, 748, 814, 847, 862, 893
PspN4I GGNNCC 3 cut(s) 42, 90, 1189
PspPI GGNCC 4 cut(s) 665, 752, 1000, 1108
PstI CTGCAG 1 cut(s) 742
PstNI CAGNNNCTG 1 cut(s) 848
PsuI RGATCY 1 cut(s) 605
PvuII CAGCTG 2 cut(s) 737, 806
RruI TCGCGA 1 cut(s) 871
RsaI GTAC 3 cut(s) 290, 688, 717
RsaNI GTAC 3 cut(s) 289, 687, 716
RseI CAYNNNNRTG 4 cut(s) 174, 258, 728, 1145
SapI GCTCTTC 1 cut(s) 1071
SaqAI TTAA 2 cut(s) 767, 918
SatI GCNGC 6 cut(s) 161, 164, 388, 636, 738, 1191
Sau3AI GATC 3 cut(s) 443, 605, 962
Sau96I GGNCC 4 cut(s) 665, 752, 1000, 1108
SchI GAGTC 2 cut(s) 959, 1214
ScrFI CCNGG 8 cut(s) 279, 312, 498, 750, 816, 849, 864, 895
SduI GDGCHC 1 cut(s) 796
SfaNI GCATC 6 cut(s) 191, 219, 391, 524, 616, 647
SfcI CTRYAG 3 cut(s) 325, 381, 738
SinI GGWCC 2 cut(s) 665, 1108
SmiI ATTTAAAT 1 cut(s) 768
SmiMI CAYNNNNRTG 4 cut(s) 174, 258, 728, 1145
SmlI CTYRAG 2 cut(s) 917, 1103
SmoI CTYRAG 2 cut(s) 917, 1103
Sse9I AATT 2 cut(s) 428, 763
SsiI CCGC 6 cut(s) 161, 164, 248, 387, 668, 1191
SspI AATATT 1 cut(s) 772
SspMI CTAG 3 cut(s) 6, 186, 614
StyD4I CCNGG 8 cut(s) 277, 310, 496, 748, 814, 847, 862, 893
SwaI ATTTAAAT 1 cut(s) 768
TaaI ACNGT 1 cut(s) 715
TaiI ACGT 1 cut(s) 1229
TaqI TCGA 2 cut(s) 26, 958
TasI AATT 2 cut(s) 428, 763
TauI GCSGC 4 cut(s) 163, 166, 390, 1193
TfiI GAWTC 2 cut(s) 599, 1208
Tru1I TTAA 2 cut(s) 767, 918
Tru9I TTAA 2 cut(s) 767, 918
TscAI CASTG 1 cut(s) 397
TseI GCWGC 2 cut(s) 635, 737
TspDTI ATGAA 4 cut(s) 84, 507, 1107, 1200
TspGWI ACGGA 1 cut(s) 946
TspRI CASTG 1 cut(s) 397
Van91I CCANNNNNTGG 1 cut(s) 848
Vha464I CTTAAG 1 cut(s) 917
VpaK11BI GGWCC 2 cut(s) 665, 1108
XapI RAATTY 1 cut(s) 763
XceI RCATGY 1 cut(s) 289
XspI CTAG 3 cut(s) 6, 186, 614
Zsp2I ATGCAT 1 cut(s) 825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.