pycom06g02210
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
2650162 .. 2655931
5770 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g02210.12

Sequence Viewer

Length: 1224 bp
ATGGGTAGCAGAGAGATGGACAAACCTGCTAAAGAGAAAGAGAAGGAGACGAAGACAACACCTGCTACTTCGCAGGAGCAGCCTGCGACTACTAGTACTGGCACTGTTAATCCTGACTGGTCGGGATTTCAGGCATATTCTCCAATACCTCCACATGGATTCATGGCCTCAAGTCCTCAAGCTCACCCGTATATGTGGGGGGTTCAGCATATTATGCCACCATATGGTACCCCTCCACATCCATATGTTGCAATGTATCCCCATGGCGGGTTATATGCTCACCCGTCTATGCCTCCTGGATCCTATCCTTTTAGCCCGTTTGCTATGCCTACTCCAAATGGCATTGTAGAGGCTTCTGGTAACACACCTGGAAGCATGGAAGCAGATGGTAAGCCATCTGAGGTAAAGGAAAAATTACCAATAAAACGATCAAAGGGAAGCTTGGGCAGTTTGAATATGATTACAGGGAAGAATAACGAGCTTGGCAAAACATCAGGAGCCTCTGCTAATGGAGTTTATTCCAAAAGTGCTGAGAGTGCTAGTGATGGTACAAGTGAAGGAAGTGATGCAAATTCTCAGAGTGACTCCCAATTGAAGTCAGGGGGCAGGCAAGATTCTTTGGAAGGTGATGTATCTCAGAATGGCAGTTCAGCACATGGTTCTCAGAATGGAGCACCGCATACCATGTTGAATCAAGCAATGGCCATCATGCCAATAACAGCTGCTGGTGCTCCTGGTGCTGTTCCTGGTCCTGCAACAAACTTAAATATTGGGATGGACTATTGGGGTGCTCCACCTTCTGCTGCCATGCCTGCAATGCATGGGAAGATTCCAACTACCCCAGTATCAGCAGGAATAGTTACTGCTGGGTCTCGGGATAGTGTTCAATCACAGATTCGGTTACAAGATGAGAGAGAGATGAAAAGACAGCGAAGAAAGCAGTCAAATAGGGAATCCGCTCGGCGATCTAGGTTGCGCAAGCAGGCGGAATGTGATGAGCTGGCCCAGCGTGCTGAAGGCTTAAAAGAAGAAAATAACACTCTAAGATCAGAAGTTAACCGGATCAGGAGCGAGTATGAGCAGCTTCTCTCAGAGAATGCTTCCCTAAAGGAGAGGCTTGGAGAAATTCCTGGTCGCGAAGATATACGGTCTGCCAGAAGTGAACCACATTTGAGCAATGACACTAAACAGAATGCACAAACAGAACAGCACGGCGGCCACTAG

Protein Analysis

408

Amino Acids

43.49

Weight (kDa)

6.88

Isoelectric Point (pI)

59.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 70
Acc16I TGCGCA 1 cut(s) 977
Acc36I ACCTGC 2 cut(s) 34, 70
Acc65I GGTACC 1 cut(s) 227
AccB1I GGYRCC 1 cut(s) 227
AccB7I CCANNNNNTGG 1 cut(s) 224
AccBSI CCGCTC 1 cut(s) 959
AccII CGCG 1 cut(s) 1137
AciI CCGC 5 cut(s) 267, 677, 957, 986, 1215
AclWI GGATC 3 cut(s) 294, 307, 1070
AcoI YGGCCR 2 cut(s) 702, 1216
AcsI RAATTY 2 cut(s) 571, 1125
AcuI CTGAAG 1 cut(s) 1035
AfaI GTAC 3 cut(s) 97, 229, 550
AfiI CCNNNNNNNGG 4 cut(s) 155, 224, 266, 267
AgsI TTSAA 4 cut(s) 454, 595, 691, 887
AhlI ACTAGT 1 cut(s) 92
AjnI CCWGG 5 cut(s) 295, 367, 733, 745, 1129
AluBI AGCT 6 cut(s) 182, 441, 481, 722, 1000, 1084
AluI AGCT 6 cut(s) 182, 441, 481, 722, 1000, 1084
Alw21I GWGCWC 3 cut(s) 676, 733, 793
Alw26I GTCTC 2 cut(s) 41, 876
AlwI GGATC 3 cut(s) 294, 307, 1070
AlwNI CAGNNNCTG 1 cut(s) 725
Ama87I CYCGRG 1 cut(s) 873
AoxI GGCC 4 cut(s) 165, 702, 1002, 1216
ApeKI GCWGC 4 cut(s) 79, 722, 803, 1081
ApoI RAATTY 2 cut(s) 571, 1125
Asp718I GGTACC 1 cut(s) 227
AspLEI GCGC 1 cut(s) 978
AspS9I GGNCC 2 cut(s) 749, 1003
AsuHPI GGTGA 3 cut(s) 176, 272, 638
AvaI CYCGRG 1 cut(s) 873
AvaII GGWCC 1 cut(s) 749
BaeI ACNNNNGTAYC 2 cut(s) 828, 861
BalI TGGCCA 1 cut(s) 704
BamHI GGATCC 1 cut(s) 299
BanI GGYRCC 1 cut(s) 227
BbsI GAAGAC 1 cut(s) 59
Bbv12I GWGCWC 3 cut(s) 676, 733, 793
BbvI GCAGC 4 cut(s) 91, 709, 790, 1093
BccI CCATC 6 cut(s) 10, 380, 403, 539, 713, 769
BciT130I CCWGG 5 cut(s) 297, 369, 735, 747, 1131
BciVI GTATCC 1 cut(s) 267
BcoDI GTCTC 2 cut(s) 41, 876
BcuI ACTAGT 1 cut(s) 92
BfaI CTAG 4 cut(s) 93, 540, 969, 1222
BfuAI ACCTGC 2 cut(s) 34, 70
BfuI GTATCC 1 cut(s) 267
BisI GCNGC 5 cut(s) 80, 723, 804, 1082, 1216
BlsI GCNGC 5 cut(s) 81, 724, 805, 1083, 1217
BmcAI AGTACT 1 cut(s) 97
Bme1390I CCNGG 5 cut(s) 297, 369, 735, 747, 1131
Bme18I GGWCC 1 cut(s) 749
BmeT110I CYCGRG 1 cut(s) 873
BmgT120I GGNCC 2 cut(s) 749, 1003
BmiI GGNNCC 3 cut(s) 229, 301, 499
BmrFI CCNGG 5 cut(s) 297, 369, 735, 747, 1131
BmrI ACTGGG 1 cut(s) 836
BmsI GCATC 1 cut(s) 556
BmuI ACTGGG 1 cut(s) 836
BpiI GAAGAC 1 cut(s) 59
BpuEI CTTGAG 2 cut(s) 154, 162
BsaI GGTCTC 1 cut(s) 876
BsaJI CCNNGG 1 cut(s) 262
BsaWI WCCGGW 1 cut(s) 1059
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 224, 266, 267
Bse1I ACTGG 3 cut(s) 103, 122, 842
Bse3DI GCAATG 4 cut(s) 258, 705, 822, 1183
BseBI CCWGG 5 cut(s) 297, 369, 735, 747, 1131
BseDI CCNNGG 1 cut(s) 262
BseGI GGATG 2 cut(s) 238, 780
BseLI CCNNNNNNNGG 4 cut(s) 155, 224, 266, 267
BseMI GCAATG 4 cut(s) 258, 705, 822, 1183
BseMII CTCAG 6 cut(s) 390, 522, 590, 650, 677, 1104
BseNI ACTGG 3 cut(s) 103, 122, 842
BseXI GCAGC 4 cut(s) 91, 709, 790, 1093
BseYI CCCAGC 2 cut(s) 866, 1005
Bsh1236I CGCG 1 cut(s) 1137
BshFI GGCC 4 cut(s) 167, 704, 1004, 1218
BshNI GGYRCC 1 cut(s) 227
BsiHKAI GWGCWC 3 cut(s) 676, 733, 793
BsiHKCI CYCGRG 1 cut(s) 873
BsiSI CCGG 1 cut(s) 1060
BslI CCNNNNNNNGG 4 cut(s) 155, 224, 266, 267
BsmAI GTCTC 2 cut(s) 41, 876
BsmBI CGTCTC 1 cut(s) 41
BsmI GAATGC 2 cut(s) 1102, 1198
BsnI GGCC 4 cut(s) 167, 704, 1004, 1218
Bso31I GGTCTC 1 cut(s) 876
BsoBI CYCGRG 1 cut(s) 873
Bsp1286I GDGCHC 3 cut(s) 676, 733, 793
Bsp143I GATC 5 cut(s) 299, 428, 965, 1046, 1062
Bsp19I CCATGG 1 cut(s) 262
Bsp68I TCGCGA 1 cut(s) 1137
BspACI CCGC 5 cut(s) 267, 677, 957, 986, 1215
BspANI GGCC 4 cut(s) 167, 704, 1004, 1218
BspCNI CTCAG 6 cut(s) 391, 523, 589, 649, 676, 1103
BspFNI CGCG 1 cut(s) 1137
BspLI GGNNCC 3 cut(s) 229, 301, 499
BspMI ACCTGC 2 cut(s) 34, 70
BspPI GGATC 3 cut(s) 294, 307, 1070
BspT107I GGYRCC 1 cut(s) 227
BspTNI GGTCTC 1 cut(s) 876
BsrBI CCGCTC 1 cut(s) 959
BsrDI GCAATG 4 cut(s) 258, 705, 822, 1183
BsrI ACTGG 3 cut(s) 103, 122, 842
BssECI CCNNGG 1 cut(s) 262
BssMI GATC 5 cut(s) 299, 428, 965, 1046, 1062
BssT1I CCWWGG 1 cut(s) 262
Bst2UI CCWGG 5 cut(s) 297, 369, 735, 747, 1131
Bst4CI ACNGT 2 cut(s) 106, 1149
BstAPI GCANNNNNTGC 1 cut(s) 214
BstC8I GCNNGC 7 cut(s) 84, 608, 813, 980, 984, 1002, 1011
BstDEI CTNAG 7 cut(s) 399, 531, 576, 636, 663, 1043, 1090
BstDSI CCRYGG 1 cut(s) 262
BstF5I GGATG 2 cut(s) 238, 780
BstFNI CGCG 1 cut(s) 1137
BstHHI GCGC 1 cut(s) 978
BstKTI GATC 5 cut(s) 302, 431, 968, 1049, 1065
BstMAI GTCTC 2 cut(s) 41, 876
BstMBI GATC 5 cut(s) 299, 428, 965, 1046, 1062
BstNI CCWGG 5 cut(s) 297, 369, 735, 747, 1131
BstSCI CCNGG 5 cut(s) 295, 367, 733, 745, 1129
BstUI CGCG 1 cut(s) 1137
BstV1I GCAGC 4 cut(s) 91, 709, 790, 1093
BstV2I GAAGAC 1 cut(s) 59
BstX2I RGATCY 1 cut(s) 299
BstYI RGATCY 1 cut(s) 299
BsuI GTATCC 1 cut(s) 267
BsuRI GGCC 4 cut(s) 167, 704, 1004, 1218
BtgI CCRYGG 1 cut(s) 262
BtsCI GGATG 2 cut(s) 238, 780
BtsIMutI CAGTG 1 cut(s) 102
BtuMI TCGCGA 1 cut(s) 1137
BveI ACCTGC 2 cut(s) 34, 70
Cac8I GCNNGC 7 cut(s) 84, 608, 813, 980, 984, 1002, 1011
CaiI CAGNNNCTG 1 cut(s) 725
CfoI GCGC 1 cut(s) 978
Cfr13I GGNCC 2 cut(s) 749, 1003
Csp6I GTAC 3 cut(s) 96, 228, 549
CviAII CATG 9 cut(s) 155, 163, 263, 376, 656, 685, 709, 808, 821
CviQI GTAC 3 cut(s) 96, 228, 549
DdeI CTNAG 7 cut(s) 399, 531, 576, 636, 663, 1043, 1090
DpnI GATC 5 cut(s) 301, 430, 967, 1048, 1064
DpnII GATC 5 cut(s) 299, 428, 965, 1046, 1062
EaeI YGGCCR 2 cut(s) 702, 1216
EciI GGCGGA 1 cut(s) 1001
Eco130I CCWWGG 1 cut(s) 262
Eco31I GGTCTC 1 cut(s) 876
Eco47I GGWCC 1 cut(s) 749
Eco57I CTGAAG 1 cut(s) 1035
Eco88I CYCGRG 1 cut(s) 873
EcoRII CCWGG 5 cut(s) 295, 367, 733, 745, 1129
EcoT14I CCWWGG 1 cut(s) 262
EcoT22I ATGCAT 1 cut(s) 822
ErhI CCWWGG 1 cut(s) 262
Esp3I CGTCTC 1 cut(s) 41
FaeI CATG 9 cut(s) 158, 166, 266, 379, 659, 688, 712, 811, 824
FalI AAGNNNNNCTT 2 cut(s) 425, 457
FatI CATG 9 cut(s) 154, 162, 262, 375, 655, 684, 708, 807, 820
FauI CCCGC 1 cut(s) 260
FauNDI CATATG 2 cut(s) 223, 244
Fnu4HI GCNGC 5 cut(s) 80, 723, 804, 1082, 1216
FokI GGATG 2 cut(s) 225, 787
Fsp4HI GCNGC 5 cut(s) 80, 723, 804, 1082, 1216
FspBI CTAG 4 cut(s) 93, 540, 969, 1222
FspI TGCGCA 1 cut(s) 977
GlaI GCGC 1 cut(s) 977
GluI GCNGC 5 cut(s) 80, 723, 804, 1082, 1216
GsaI CCCAGC 2 cut(s) 870, 1009
HaeIII GGCC 4 cut(s) 167, 704, 1004, 1218
HapII CCGG 1 cut(s) 1060
HhaI GCGC 1 cut(s) 978
Hin1II CATG 9 cut(s) 158, 166, 266, 379, 659, 688, 712, 811, 824
Hin6I GCGC 1 cut(s) 976
HinP1I GCGC 1 cut(s) 976
HincII GTYRAC 1 cut(s) 1057
HindII GTYRAC 1 cut(s) 1057
HindIII AAGCTT 1 cut(s) 439
HinfI GANTC 7 cut(s) 159, 584, 614, 691, 829, 895, 953
HpaI GTTAAC 1 cut(s) 1057
HpaII CCGG 1 cut(s) 1060
HphI GGTGA 3 cut(s) 176, 272, 638
Hpy166II GTNNAC 2 cut(s) 1057, 1163
Hpy188I TCNGA 6 cut(s) 400, 579, 639, 666, 1051, 1093
Hpy188III TCNNGA 6 cut(s) 113, 123, 495, 875, 1066, 1136
Hpy8I GTNNAC 2 cut(s) 1057, 1163
HpyAV CCTTC 5 cut(s) 37, 551, 617, 807, 1010
HpyCH4III ACNGT 2 cut(s) 106, 1149
HpyCH4V TGCA 6 cut(s) 251, 569, 755, 815, 820, 1196
HpyF3I CTNAG 7 cut(s) 399, 531, 576, 636, 663, 1043, 1090
Hsp92II CATG 9 cut(s) 158, 166, 266, 379, 659, 688, 712, 811, 824
HspAI GCGC 1 cut(s) 976
KpnI GGTACC 1 cut(s) 231
KspAI GTTAAC 1 cut(s) 1057
Kzo9I GATC 5 cut(s) 299, 428, 965, 1046, 1062
LmnI GCTCC 6 cut(s) 76, 497, 671, 736, 796, 1068
Lsp1109I GCAGC 4 cut(s) 91, 709, 790, 1093
LweI GCATC 1 cut(s) 556
MaeI CTAG 4 cut(s) 93, 540, 969, 1222
MaeIII GTNAC 4 cut(s) 359, 581, 859, 900
MalI GATC 5 cut(s) 301, 430, 967, 1048, 1064
MbiI CCGCTC 1 cut(s) 959
MboI GATC 5 cut(s) 299, 428, 965, 1046, 1062
MboII GAAGA 6 cut(s) 64, 481, 838, 945, 1040, 1151
MfeI CAATTG 1 cut(s) 590
MflI RGATCY 1 cut(s) 299
MhlI GDGCHC 3 cut(s) 676, 733, 793
MlsI TGGCCA 1 cut(s) 704
MluCI AATT 4 cut(s) 413, 571, 590, 1125
MluNI TGGCCA 1 cut(s) 704
MlyI GAGTC 1 cut(s) 578
MmeI TCCRAC 1 cut(s) 857
MnlI CCTC 9 cut(s) 159, 178, 186, 243, 303, 343, 394, 511, 1107
Mox20I TGGCCA 1 cut(s) 704
Mph1103I ATGCAT 1 cut(s) 822
MscI TGGCCA 1 cut(s) 704
MseI TTAA 4 cut(s) 108, 764, 1022, 1056
MslI CAYNNNNRTG 1 cut(s) 243
Msp20I TGGCCA 1 cut(s) 704
MspA1I CMGCKG 1 cut(s) 722
MspI CCGG 1 cut(s) 1060
MspR9I CCNGG 5 cut(s) 297, 369, 735, 747, 1131
MunI CAATTG 1 cut(s) 590
Mva1269I GAATGC 2 cut(s) 1102, 1198
MvaI CCWGG 5 cut(s) 297, 369, 735, 747, 1131
MvnI CGCG 1 cut(s) 1137
NcoI CCATGG 1 cut(s) 262
NdeI CATATG 2 cut(s) 223, 244
NdeII GATC 5 cut(s) 299, 428, 965, 1046, 1062
NlaIII CATG 9 cut(s) 158, 166, 266, 379, 659, 688, 712, 811, 824
NlaIV GGNNCC 3 cut(s) 229, 301, 499
NmeAIII GCCGAG 1 cut(s) 940
NmuCI GTSAC 1 cut(s) 581
NruI TCGCGA 1 cut(s) 1137
NsbI TGCGCA 1 cut(s) 977
NsiI ATGCAT 1 cut(s) 822
PaqCI CACCTGC 1 cut(s) 70
PctI GAATGC 2 cut(s) 1102, 1198
PfeI GAWTC 6 cut(s) 159, 614, 691, 829, 895, 953
PflMI CCANNNNNTGG 1 cut(s) 224
PfoI TCCNGGA 1 cut(s) 295
PkrI GCNGC 5 cut(s) 81, 724, 805, 1083, 1217
PleI GAGTC 1 cut(s) 578
PpsI GAGTC 1 cut(s) 578
Psp6I CCWGG 5 cut(s) 295, 367, 733, 745, 1129
PspFI CCCAGC 2 cut(s) 866, 1005
PspGI CCWGG 5 cut(s) 295, 367, 733, 745, 1129
PspN4I GGNNCC 3 cut(s) 229, 301, 499
PspPI GGNCC 2 cut(s) 749, 1003
PstNI CAGNNNCTG 1 cut(s) 725
PsuI RGATCY 1 cut(s) 299
PvuII CAGCTG 1 cut(s) 722
RruI TCGCGA 1 cut(s) 1137
RsaI GTAC 3 cut(s) 97, 229, 550
RsaNI GTAC 3 cut(s) 96, 228, 549
RseI CAYNNNNRTG 1 cut(s) 243
SaqAI TTAA 4 cut(s) 108, 764, 1022, 1056
SatI GCNGC 5 cut(s) 80, 723, 804, 1082, 1216
Sau3AI GATC 5 cut(s) 299, 428, 965, 1046, 1062
Sau96I GGNCC 2 cut(s) 749, 1003
ScaI AGTACT 1 cut(s) 97
SchI GAGTC 1 cut(s) 578
ScrFI CCNGG 5 cut(s) 297, 369, 735, 747, 1131
SduI GDGCHC 3 cut(s) 676, 733, 793
SfaNI GCATC 1 cut(s) 556
SinI GGWCC 1 cut(s) 749
SmiMI CAYNNNNRTG 1 cut(s) 243
SmlI CTYRAG 2 cut(s) 169, 177
SmoI CTYRAG 2 cut(s) 169, 177
SpeI ACTAGT 1 cut(s) 92
Sse9I AATT 4 cut(s) 413, 571, 590, 1125
SsiI CCGC 5 cut(s) 267, 677, 957, 986, 1215
SspI AATATT 1 cut(s) 769
SspMI CTAG 4 cut(s) 93, 540, 969, 1222
StyD4I CCNGG 5 cut(s) 295, 367, 733, 745, 1129
StyI CCWWGG 1 cut(s) 262
TaaI ACNGT 2 cut(s) 106, 1149
TasI AATT 4 cut(s) 413, 571, 590, 1125
TatI WGTACW 1 cut(s) 95
TauI GCSGC 1 cut(s) 1218
TfiI GAWTC 6 cut(s) 159, 614, 691, 829, 895, 953
Tru1I TTAA 4 cut(s) 108, 764, 1022, 1056
Tru9I TTAA 4 cut(s) 108, 764, 1022, 1056
TscAI CASTG 1 cut(s) 109
TseFI GTSAC 1 cut(s) 581
TseI GCWGC 4 cut(s) 79, 722, 803, 1081
Tsp45I GTSAC 1 cut(s) 581
TspDTI ATGAA 2 cut(s) 151, 935
TspRI CASTG 1 cut(s) 109
Van91I CCANNNNNTGG 1 cut(s) 224
VpaK11BI GGWCC 1 cut(s) 749
XapI RAATTY 2 cut(s) 571, 1125
XspI CTAG 4 cut(s) 93, 540, 969, 1222
ZrmI AGTACT 1 cut(s) 97
Zsp2I ATGCAT 1 cut(s) 822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.