AT2G36670

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
15364776 .. 15368169
3394 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G36670.4

Sequence Viewer

Length: 1539 bp
ATGCGTACCCTTCGTTCCCTAATGTTGGCGGCGGCTCTAGCAGTGGCTTTGGCCGTGACTGGTTTTGCAGCATCGCCGTTACCTTCGGCCTATGCGAAATACGCAGCTGGTCCGACCAAGATTCTTCCTTTACAAAGGGCTTTTCCTCTAGACGAGCTAGTGGAGCTGAGTGAACTTAGAGCGCGTGATCGTGTCAGACACGCGCGAATCTTACTCGGCGGTGGTCGTCAGAGCTCTGTTGGCGGCGTCGTCGACTTCCCAGTTCAAGGCTCTTCCGATCCTTACCTCGTCGGCTCCAAGATGACTATGCTTTATTTCACAAAGGTCAAATTAGGTTCTCCTCCTACAGAGTTCAATGTTCAGATTGATACTGGAAGTGACATCTTGTGGGTTACTTGTAGTTCTTGCAGTAATTGCCCTCACTCTAGTGGACTTGGAATCGACCTTCATTTCTTTGATGCTCCTGGTTCCTTGACTGCTGGCTCTGTTACTTGTTCAGATCCGATTTGTTCTTCAGTTTTTCAGACGACAGCTGCACAATGTTCTGAGAATAACCAGTGTGGTTACTCCTTTCGCTATGGCGATGGAAGTGGGACTTCAGGTTACTACATGACTGACACCTTCTATTTTGATGCGATTTTGGGAGAGTCTTTGGTTGCAAACTCATCTGCTCCCATTGTTTTCGGCTGTAGTACCTACCAATCTGGGGACTTGACAAAGTCAGACAAAGCAGTGGATGGAATCTTTGGTTTCGGCAAGGGAAAGTTGTCAGTTGTCTCTCAGTTGTCATCACGAGGGATTACGCCGCCAGTGTTTTCTCATTGCTTGAAAGGAGATGGTAGTGGAGGTGGTGTCTTTGTCCTTGGCGAGATATTGGTCCCAGGAATGGTTTACAGTCCTCTCGTTCCATCACAACCTCACTATAACTTAAATCTGCTGAGCATTGGCGTGAATGGACAGATGCTGCCACTCGATGCAGCGGTGTTTGAAGCATCAAATACCCGTGGAACTATTGTTGACACAGGAACCACTTTGACATATCTGGTGAAAGAGGCTTATGATCTTTTTCTCAATGCTATATCAAACAGCGTGTCACAGTTGGTAACACCAATAATTTCTAATGGAGAGCAGTGCTATTTGGTCTCGACTAGCATAAGTGACATGTTTCCTTCAGTTAGTCTCAACTTTGCTGGTGGTGCATCAATGATGTTAAGACCTCAGGACTACTTATTTCATTACGGTATCTATGATGGTGCGTCCATGTGGTGCATTGGTTTTCAGAAAGCTCCGGAAGAACAAACCATTTTAGGAGATCTTGTGCTTAAAGATAAAGTCTTTGTATATGATCTTGCTCGACAACGGATTGGATGGGCAAGCTATGATTGTTCAATGTCTGTGAATGTATCGATAACTTCAGGAAAGGATATTGTAAACTCAGGGCAGCCATGTTTGAACATCTCAACAAGAGACATACTCATACGATTATTCTTTAGCATCTTATTTGGTTTACTTCTTTGTATCTTCTTCTCCTTGACGTAA

Protein Analysis

512

Amino Acids

54.7

Weight (kDa)

5.29

Isoelectric Point (pI)

37.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 34 - 218 3.6e-41 Xylanase inhibitor N-terminal
Asp PF00026 34 - 388 1.4e-32 Eukaryotic aspartyl protease
TAXi_C PF14541 236 - 387 7.1e-25 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 252
AccII CGCG 3 cut(s) 184, 203, 205
AccIII TCCGGA 1 cut(s) 1288
AciI CCGC 6 cut(s) 29, 32, 219, 243, 806, 980
AclWI GGATC 2 cut(s) 272, 494
AcoI YGGCCR 1 cut(s) 51
AcuI CTGAAG 4 cut(s) 498, 582, 1155, 1398
AcyI GRCGYC 1 cut(s) 246
AfaI GTAC 2 cut(s) 7, 694
AfiI CCNNNNNNNGG 4 cut(s) 25, 266, 706, 886
AflIII ACRYGT 1 cut(s) 1161
AgsI TTSAA 6 cut(s) 266, 355, 829, 989, 1389, 1453
AjnI CCWGG 2 cut(s) 463, 880
AleI CACNNNNGTG 1 cut(s) 426
AluBI AGCT 7 cut(s) 107, 157, 166, 234, 533, 1286, 1377
AluI AGCT 7 cut(s) 107, 157, 166, 234, 533, 1286, 1377
Alw21I GWGCWC 1 cut(s) 236
Alw26I GTCTC 4 cut(s) 781, 1147, 1184, 1461
AlwI GGATC 2 cut(s) 272, 494
AlwNI CAGNNNCTG 1 cut(s) 964
Aor13HI TCCGGA 1 cut(s) 1288
AoxI GGCC 2 cut(s) 51, 87
ApeKI GCWGC 6 cut(s) 68, 104, 533, 964, 977, 1441
ArsI GACNNNNNNTTYG 2 cut(s) 1076, 1108
AspLEI GCGC 2 cut(s) 184, 205
AspS9I GGNCC 2 cut(s) 110, 877
AsuHPI GGTGA 1 cut(s) 1057
AvaII GGWCC 2 cut(s) 110, 877
AxyI CCTNAGG 1 cut(s) 1218
BanII GRGCYC 1 cut(s) 236
BauI CACGAG 1 cut(s) 792
Bbv12I GWGCWC 1 cut(s) 236
BbvI GCAGC 6 cut(s) 80, 116, 520, 951, 989, 1453
BccI CCATC 6 cut(s) 578, 731, 830, 916, 1244, 1362
BceAI ACGGC 2 cut(s) 38, 61
BciT130I CCWGG 2 cut(s) 465, 882
BcoDI GTCTC 4 cut(s) 781, 1147, 1184, 1461
BfaI CTAG 5 cut(s) 38, 149, 158, 426, 1149
BfmI CTRYAG 2 cut(s) 345, 688
BglII AGATCT 1 cut(s) 1312
BlpI GCTNAGC 1 cut(s) 938
Bme1390I CCNGG 2 cut(s) 465, 882
Bme18I GGWCC 2 cut(s) 110, 877
BmgT120I GGNCC 2 cut(s) 110, 877
BmiI GGNNCC 4 cut(s) 295, 469, 879, 1027
BmrFI CCNGG 2 cut(s) 465, 882
BmrI ACTGGG 1 cut(s) 254
BmsI GCATC 8 cut(s) 80, 448, 622, 951, 964, 1001, 1208, 1503
BmuI ACTGGG 1 cut(s) 254
BplI GAGNNNNNCTC 2 cut(s) 1458, 1490
Bpu1102I GCTNAGC 1 cut(s) 938
Bsa29I ATCGAT 1 cut(s) 1406
BsaHI GRCGYC 1 cut(s) 246
BsaI GGTCTC 1 cut(s) 1147
BsaJI CCNNGG 3 cut(s) 862, 880, 1003
BsaWI WCCGGW 1 cut(s) 1288
BsaXI ACNNNNNCTCC 4 cut(s) 837, 867, 1302, 1332
Bsc4I CCNNNNNNNGG 4 cut(s) 25, 266, 706, 886
Bse1I ACTGG 5 cut(s) 64, 260, 376, 556, 809
Bse21I CCTNAGG 1 cut(s) 1218
Bse3DI GCAATG 1 cut(s) 820
BseAI TCCGGA 1 cut(s) 1288
BseBI CCWGG 2 cut(s) 465, 882
BseCI ATCGAT 1 cut(s) 1406
BseDI CCNNGG 3 cut(s) 862, 880, 1003
BseGI GGATG 2 cut(s) 742, 1373
BseLI CCNNNNNNNGG 4 cut(s) 25, 266, 706, 886
BseMI GCAATG 1 cut(s) 820
BseMII CTCAG 6 cut(s) 158, 537, 794, 929, 1232, 1449
BseNI ACTGG 5 cut(s) 64, 260, 376, 556, 809
BseRI GAGGAG 1 cut(s) 330
BseXI GCAGC 6 cut(s) 80, 116, 520, 951, 989, 1453
BsgI GTGCAG 1 cut(s) 519
Bsh1236I CGCG 3 cut(s) 184, 203, 205
BshFI GGCC 2 cut(s) 53, 89
BshVI ATCGAT 1 cut(s) 1406
BsiHKAI GWGCWC 1 cut(s) 236
BsiSI CCGG 1 cut(s) 1289
BslFI GGGAC 3 cut(s) 607, 722, 863
BslI CCNNNNNNNGG 4 cut(s) 25, 266, 706, 886
BsmAI GTCTC 4 cut(s) 781, 1147, 1184, 1461
BsmFI GGGAC 3 cut(s) 607, 722, 863
BsnI GGCC 2 cut(s) 53, 89
Bso31I GGTCTC 1 cut(s) 1147
Bsp1286I GDGCHC 1 cut(s) 236
Bsp13I TCCGGA 1 cut(s) 1288
Bsp143I GATC 6 cut(s) 187, 277, 499, 1060, 1312, 1345
Bsp1720I GCTNAGC 1 cut(s) 938
BspACI CCGC 6 cut(s) 29, 32, 219, 243, 806, 980
BspANI GGCC 2 cut(s) 53, 89
BspCNI CTCAG 6 cut(s) 159, 538, 793, 930, 1231, 1448
BspDI ATCGAT 1 cut(s) 1406
BspEI TCCGGA 1 cut(s) 1288
BspFNI CGCG 3 cut(s) 184, 203, 205
BspLI GGNNCC 4 cut(s) 295, 469, 879, 1027
BspPI GGATC 2 cut(s) 272, 494
BspQI GCTCTTC 1 cut(s) 277
BspTNI GGTCTC 1 cut(s) 1147
BsrDI GCAATG 1 cut(s) 820
BsrI ACTGG 5 cut(s) 64, 260, 376, 556, 809
BssECI CCNNGG 3 cut(s) 862, 880, 1003
BssMI GATC 6 cut(s) 187, 277, 499, 1060, 1312, 1345
BssNI GRCGYC 1 cut(s) 246
BssSI CACGAG 1 cut(s) 792
BssT1I CCWWGG 1 cut(s) 862
Bst2BI CACGAG 1 cut(s) 792
Bst2UI CCWGG 2 cut(s) 465, 882
Bst4CI ACNGT 3 cut(s) 896, 1098, 1241
Bst6I CTCTTC 1 cut(s) 277
BstACI GRCGYC 1 cut(s) 246
BstAPI GCANNNNNTGC 1 cut(s) 414
BstC8I GCNNGC 2 cut(s) 481, 1375
BstDEI CTNAG 7 cut(s) 167, 176, 546, 780, 938, 1218, 1435
BstDSI CCRYGG 1 cut(s) 1003
BstF5I GGATG 2 cut(s) 742, 1373
BstFNI CGCG 3 cut(s) 184, 203, 205
BstHHI GCGC 2 cut(s) 184, 205
BstKTI GATC 6 cut(s) 190, 280, 502, 1063, 1315, 1348
BstMAI GTCTC 4 cut(s) 781, 1147, 1184, 1461
BstMBI GATC 6 cut(s) 187, 277, 499, 1060, 1312, 1345
BstMWI GCNNNNNNNGC 6 cut(s) 38, 101, 163, 240, 414, 1196
BstNI CCWGG 2 cut(s) 465, 882
BstNSI RCATGY 1 cut(s) 1165
BstSCI CCNGG 2 cut(s) 463, 880
BstSFI CTRYAG 2 cut(s) 345, 688
BstUI CGCG 3 cut(s) 184, 203, 205
BstV1I GCAGC 6 cut(s) 80, 116, 520, 951, 989, 1453
BstX2I RGATCY 2 cut(s) 499, 1312
BstYI RGATCY 2 cut(s) 499, 1312
Bsu15I ATCGAT 1 cut(s) 1406
Bsu36I CCTNAGG 1 cut(s) 1218
BsuRI GGCC 2 cut(s) 53, 89
BsuTUI ATCGAT 1 cut(s) 1406
BtgI CCRYGG 1 cut(s) 1003
BtgZI GCGATG 2 cut(s) 57, 597
BtsCI GGATG 2 cut(s) 742, 1373
BtsI GCAGTG 3 cut(s) 48, 738, 1136
BtsIMutI CAGTG 5 cut(s) 48, 563, 738, 816, 1136
Cac8I GCNNGC 2 cut(s) 481, 1375
CaiI CAGNNNCTG 1 cut(s) 964
CfoI GCGC 2 cut(s) 184, 205
Cfr13I GGNCC 2 cut(s) 110, 877
ClaI ATCGAT 1 cut(s) 1406
CseI GACGC 2 cut(s) 235, 1245
Csp6I GTAC 2 cut(s) 6, 693
CviAII CATG 4 cut(s) 610, 1162, 1261, 1446
CviQI GTAC 2 cut(s) 6, 693
DdeI CTNAG 7 cut(s) 167, 176, 546, 780, 938, 1218, 1435
DpnI GATC 6 cut(s) 189, 279, 501, 1062, 1314, 1347
DpnII GATC 6 cut(s) 187, 277, 499, 1060, 1312, 1345
EaeI YGGCCR 1 cut(s) 51
Eam1104I CTCTTC 1 cut(s) 277
EarI CTCTTC 1 cut(s) 277
Ecl136II GAGCTC 1 cut(s) 234
Eco130I CCWWGG 1 cut(s) 862
Eco24I GRGCYC 1 cut(s) 236
Eco31I GGTCTC 1 cut(s) 1147
Eco47I GGWCC 2 cut(s) 110, 877
Eco53kI GAGCTC 1 cut(s) 234
Eco57I CTGAAG 4 cut(s) 498, 582, 1155, 1398
Eco81I CCTNAGG 1 cut(s) 1218
EcoICRI GAGCTC 1 cut(s) 234
EcoRII CCWGG 2 cut(s) 463, 880
EcoT14I CCWWGG 1 cut(s) 862
EcoT38I GRGCYC 1 cut(s) 236
ErhI CCWWGG 1 cut(s) 862
FaeI CATG 4 cut(s) 613, 1165, 1264, 1449
FalI AAGNNNNNCTT 2 cut(s) 580, 612
FaqI GGGAC 3 cut(s) 607, 722, 863
FatI CATG 4 cut(s) 609, 1161, 1260, 1445
FblI GTMKAC 1 cut(s) 252
FokI GGATG 2 cut(s) 749, 1380
FriOI GRGCYC 1 cut(s) 236
FspBI CTAG 5 cut(s) 38, 149, 158, 426, 1149
GlaI GCGC 2 cut(s) 183, 204
HaeIII GGCC 2 cut(s) 53, 89
HapII CCGG 1 cut(s) 1289
HgaI GACGC 2 cut(s) 235, 1245
HhaI GCGC 2 cut(s) 184, 205
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 4 cut(s) 613, 1165, 1264, 1449
Hin6I GCGC 2 cut(s) 182, 203
HinP1I GCGC 2 cut(s) 182, 203
HincII GTYRAC 2 cut(s) 253, 1018
HindII GTYRAC 2 cut(s) 253, 1018
HinfI GANTC 5 cut(s) 121, 207, 438, 647, 741
HpaII CCGG 1 cut(s) 1289
HphI GGTGA 1 cut(s) 1057
Hpy166II GTNNAC 7 cut(s) 173, 253, 431, 892, 1018, 1432, 1508
Hpy188III TCNNGA 6 cut(s) 149, 792, 1144, 1220, 1289, 1416
Hpy8I GTNNAC 7 cut(s) 173, 253, 431, 892, 1018, 1432, 1508
Hpy99I CGWCG 3 cut(s) 251, 254, 293
HpyAV CCTTC 5 cut(s) 20, 93, 455, 631, 1179
HpyCH4III ACNGT 3 cut(s) 896, 1098, 1241
HpyCH4IV ACGT 1 cut(s) 1535
HpyCH4V TGCA 7 cut(s) 68, 408, 536, 659, 977, 1199, 1269
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 101, 163, 240, 414, 1196
HpyF3I CTNAG 7 cut(s) 167, 176, 546, 780, 938, 1218, 1435
HpySE526I ACGT 1 cut(s) 1535
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 4 cut(s) 613, 1165, 1264, 1449
HspAI GCGC 2 cut(s) 182, 203
Kpn2I TCCGGA 1 cut(s) 1288
Kzo9I GATC 6 cut(s) 187, 277, 499, 1060, 1312, 1345
LguI GCTCTTC 1 cut(s) 277
LmnI GCTCC 5 cut(s) 163, 299, 466, 676, 1291
Lsp1109I GCAGC 6 cut(s) 80, 116, 520, 951, 989, 1453
LweI GCATC 8 cut(s) 80, 448, 622, 951, 964, 1001, 1208, 1503
MaeI CTAG 5 cut(s) 38, 149, 158, 426, 1149
MaeII ACGT 1 cut(s) 1535
MalI GATC 6 cut(s) 189, 279, 501, 1062, 1314, 1347
MboI GATC 6 cut(s) 187, 277, 499, 1060, 1312, 1345
MboII GAAGA 6 cut(s) 116, 264, 504, 1304, 1513, 1516
MflI RGATCY 2 cut(s) 499, 1312
MhlI GDGCHC 1 cut(s) 236
MluCI AATT 3 cut(s) 329, 412, 1113
MlyI GAGTC 1 cut(s) 656
MmeI TCCRAC 1 cut(s) 137
MroI TCCGGA 1 cut(s) 1288
MseI TTAA 3 cut(s) 929, 1211, 1323
MslI CAYNNNNRTG 2 cut(s) 426, 947
MspA1I CMGCKG 3 cut(s) 107, 533, 980
MspI CCGG 1 cut(s) 1289
MspR9I CCNGG 2 cut(s) 465, 882
MvaI CCWGG 2 cut(s) 465, 882
MvnI CGCG 3 cut(s) 184, 203, 205
MwoI GCNNNNNNNGC 6 cut(s) 38, 101, 163, 240, 414, 1196
NdeII GATC 6 cut(s) 187, 277, 499, 1060, 1312, 1345
NlaIII CATG 4 cut(s) 613, 1165, 1264, 1449
NlaIV GGNNCC 4 cut(s) 295, 469, 879, 1027
NmeAIII GCCGAG 1 cut(s) 195
NmuCI GTSAC 4 cut(s) 55, 377, 1092, 1157
NspI RCATGY 1 cut(s) 1165
OliI CACNNNNGTG 1 cut(s) 426
PciI ACATGT 1 cut(s) 1161
PciSI GCTCTTC 1 cut(s) 277
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PfeI GAWTC 4 cut(s) 121, 207, 438, 741
PflFI GACNNNGTC 1 cut(s) 718
PleI GAGTC 1 cut(s) 655
PpsI GAGTC 1 cut(s) 655
PscI ACATGT 1 cut(s) 1161
Psp124BI GAGCTC 1 cut(s) 236
Psp6I CCWGG 2 cut(s) 463, 880
PspGI CCWGG 2 cut(s) 463, 880
PspN4I GGNNCC 4 cut(s) 295, 469, 879, 1027
PspPI GGNCC 2 cut(s) 110, 877
PsrI GAACNNNNNNTAC 1 cut(s) 30
PstNI CAGNNNCTG 1 cut(s) 964
PsuI RGATCY 2 cut(s) 499, 1312
PsyI GACNNNGTC 1 cut(s) 718
PvuII CAGCTG 2 cut(s) 107, 533
RsaI GTAC 2 cut(s) 7, 694
RsaNI GTAC 2 cut(s) 6, 693
RseI CAYNNNNRTG 2 cut(s) 426, 947
SacI GAGCTC 1 cut(s) 236
SalI GTCGAC 1 cut(s) 251
SapI GCTCTTC 1 cut(s) 277
SaqAI TTAA 3 cut(s) 929, 1211, 1323
Sau3AI GATC 6 cut(s) 187, 277, 499, 1060, 1312, 1345
Sau96I GGNCC 2 cut(s) 110, 877
SchI GAGTC 1 cut(s) 656
ScrFI CCNGG 2 cut(s) 465, 882
SduI GDGCHC 1 cut(s) 236
SfaNI GCATC 8 cut(s) 80, 448, 622, 951, 964, 1001, 1208, 1503
SfcI CTRYAG 2 cut(s) 345, 688
SinI GGWCC 2 cut(s) 110, 877
SmiMI CAYNNNNRTG 2 cut(s) 426, 947
Sse9I AATT 3 cut(s) 329, 412, 1113
SsiI CCGC 6 cut(s) 29, 32, 219, 243, 806, 980
SspMI CTAG 5 cut(s) 38, 149, 158, 426, 1149
SstI GAGCTC 1 cut(s) 236
StyD4I CCNGG 2 cut(s) 463, 880
StyI CCWWGG 1 cut(s) 862
TaaI ACNGT 3 cut(s) 896, 1098, 1241
TaiI ACGT 1 cut(s) 1538
TaqI TCGA 6 cut(s) 252, 441, 972, 1145, 1354, 1406
TasI AATT 3 cut(s) 329, 412, 1113
TauI GCSGC 4 cut(s) 32, 35, 246, 808
TfiI GAWTC 4 cut(s) 121, 207, 438, 741
Tru1I TTAA 3 cut(s) 929, 1211, 1323
Tru9I TTAA 3 cut(s) 929, 1211, 1323
TscAI CASTG 5 cut(s) 48, 563, 738, 816, 1136
TseFI GTSAC 4 cut(s) 55, 377, 1092, 1157
TseI GCWGC 6 cut(s) 68, 104, 533, 964, 977, 1441
Tsp45I GTSAC 4 cut(s) 55, 377, 1092, 1157
TspDTI ATGAA 2 cut(s) 437, 1223
TspGWI ACGGA 1 cut(s) 1375
TspRI CASTG 5 cut(s) 48, 563, 738, 816, 1136
Tth111I GACNNNGTC 1 cut(s) 718
VpaK11BI GGWCC 2 cut(s) 110, 877
XbaI TCTAGA 1 cut(s) 148
XceI RCATGY 1 cut(s) 1165
XmiI GTMKAC 1 cut(s) 252
XspI CTAG 5 cut(s) 38, 149, 158, 426, 1149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.