Prupe.7G122500_v2.0.a1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
14533192 .. 14539582
6391 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G122500.2

Sequence Viewer

Length: 1491 bp
ATGCGGGTCTTCAAAGCTCCGATCTTGGCCTCCGTCGCCGTGCTGCTGTCTCTCTCTGTTGTCTACTGTGGCTTGCCGGCCACCTTTCTTTCTCTAGAACGGGCCTTTCCGCCGAGTCACCGAGTCCAACTCGACCACCTCCGAGCTCGAGACCGAGTCAGGCACGCCCGGCTCTTGCAAAACGTGGCGGGCGGCGTTGTCGACTTCTCAGTCGAAGGCACCTCCGATCCCTACGTCGTCGGGCTTTATTTTACCAAAGTGAAATTGGGCTCTCCGCCAAAAGAATTCAATGTTCAGATTGATACTGGAAGTGACATCTTGTGGATTACCTGCAATTCCTGCAGCGATTGCCCCCAGTCCAGTGGACTCGGAATTGAGCTCAATTTATATGATTCTGCCAGCTCGTCAACTGCGGGGCTGATCCCCTGTTCAGACCCAATGTGCACCTCCTCATTTCAAACTTCATCAACCGAATGCTCTCGTCAGAGTAATCAGTGCAGTTACACTTTTCAATATGGAGATGGAAGTGGAACAACTGGTTATTACGTATCAGATGCGCTATATTTTGACATGATTCTGGGGCAGTCTTATATTGCTAACTCTTCGGCATTCGTTGTTTTCGGGTGTAGTACCTATCAGTCTGGGGATTTGACTAAGACAGATAAAGCTGTGGATGGGATATTTGGGTTCGGGCAAGGGGCTTTGTCTGTTATATCACAGTTGTCATCTCGAGGGGTAACTCCCAAAGTGTTCTCTCATTGTTTGAAGGGAGATGGCAATGGAGGGGGTATACTTGTTCTTGGTGAGATTTTGGAGCCAAATATTGTTTATAGTCCCCTTGTCCCGTCACAGCAGCATTATAATTTAAATCTGCAGAGCATTGCTGTCAATGGGCAAATATTGCCAATTGATCAAGCTGCTTTCACCACATCAAACAGCCGAGGAACTATTGTTGACTCAGGAACAACTTTGACATACCTTGTTGAAGAAGCTTACGATCCTTTTGTTAGTGCTATAACTTCAGCTGTTTCACAATCTGTGACTCCCATCATTTCAAAAGGAAACCAGTGTTATCTTGTTTCCACCAGTTTGGCTGAGGTATTTCCTCCAGTTAGTCTAAACTTTGCCGCTGGTGCATCAATGGTGTTGAAACCCGAAGAATACCTCATGCGTACTGGTTCTAGTGAAGGTGCTGCTGTGTGGTGCATTGGTTTTCAGAAGGTTCAGGGAGGGGTGACAATTTTAGGAGATCTTGTTCTAAAAGATAAGATATTCGTGTATGATTTAGCTCATCAACGGATTGGATGGGCTAACTATGATTGCTCATTGTCTGTAAATGTCTCTGTAACTTCTAGCAAAGACGAGTATATCAATGCAGGACAGCTGAGTGAGAGCAGCTCATCAGGAGACATGCTATTCAAGCTGCTAACAACAGGAATTGTGGTTTTCTTGATGCACATATTGGTCTTTGTGGAGTTCCATTTTCTGTAA

Protein Analysis

497

Amino Acids

53.16

Weight (kDa)

5.02

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 861
AasI GACNNNNNNGTC 1 cut(s) 209
Acc36I ACCTGC 1 cut(s) 338
AccB1I GGYRCC 1 cut(s) 218
AccI GTMKAC 3 cut(s) 63, 201, 790
AciI CCGC 7 cut(s) 4, 110, 188, 192, 275, 413, 1128
AclWI GGATC 3 cut(s) 221, 415, 992
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 1 cut(s) 284
AcuI CTGAAG 1 cut(s) 1005
AfaI GTAC 2 cut(s) 631, 1174
AgsI TTSAA 9 cut(s) 13, 289, 458, 512, 766, 986, 1056, 1150, 1420
AloI GAACNNNNNNTCC 2 cut(s) 1239, 1271
Alw21I GWGCWC 3 cut(s) 148, 381, 446
Alw26I GTCTC 4 cut(s) 54, 144, 1345, 1401
Alw44I GTGCAC 1 cut(s) 442
AlwI GGATC 3 cut(s) 221, 415, 992
Ama87I CYCGRG 2 cut(s) 147, 729
AoxI GGCC 3 cut(s) 27, 78, 102
ApaLI GTGCAC 1 cut(s) 442
ApeKI GCWGC 7 cut(s) 43, 342, 853, 917, 1193, 1395, 1423
ApoI RAATTY 1 cut(s) 284
AspLEI GCGC 1 cut(s) 559
AspS9I GGNCC 1 cut(s) 102
AsuC2I CCSGG 1 cut(s) 169
AsuHPI GGTGA 4 cut(s) 110, 815, 916, 1246
AvaI CYCGRG 2 cut(s) 147, 729
BaeGI GKGCMC 1 cut(s) 446
BanI GGYRCC 1 cut(s) 218
BanII GRGCYC 3 cut(s) 148, 272, 381
Bbv12I GWGCWC 3 cut(s) 148, 381, 446
BbvCI CCTCAGC 1 cut(s) 1095
BbvI GCAGC 7 cut(s) 30, 354, 865, 904, 1180, 1407, 1410
BccI CCATC 5 cut(s) 515, 668, 767, 1055, 1299
BceAI ACGGC 1 cut(s) 23
BclI TGATCA 1 cut(s) 910
BcnI CCSGG 1 cut(s) 169
BcoDI GTCTC 4 cut(s) 54, 144, 1345, 1401
BfaI CTAG 3 cut(s) 95, 1182, 1353
BfmI CTRYAG 2 cut(s) 340, 872
BfuAI ACCTGC 1 cut(s) 338
BglII AGATCT 1 cut(s) 1249
BisI GCNGC 9 cut(s) 44, 193, 343, 854, 918, 1128, 1194, 1396, 1424
BlsI GCNGC 9 cut(s) 45, 194, 344, 855, 919, 1129, 1195, 1397, 1425
Bme1390I CCNGG 1 cut(s) 169
BmeT110I CYCGRG 2 cut(s) 147, 729
BmgT120I GGNCC 1 cut(s) 102
BmiI GGNNCC 2 cut(s) 220, 816
BmrFI CCNGG 1 cut(s) 169
BmrI ACTGGG 1 cut(s) 349
BmsI GCATC 3 cut(s) 544, 1145, 1443
BmuI ACTGGG 1 cut(s) 349
BplI GAGNNNNNCTC 4 cut(s) 114, 146, 1382, 1414
BpmI CTGGAG 1 cut(s) 1092
Bpu10I CCTNAGC 1 cut(s) 1095
BpuMI CCSGG 1 cut(s) 169
BsaAI YACGTR 1 cut(s) 547
BsaI GGTCTC 1 cut(s) 144
BsaJI CCNNGG 1 cut(s) 940
BsaXI ACNNNNNCTCC 2 cut(s) 1239, 1269
Bse118I RCCGGY 1 cut(s) 76
Bse1I ACTGG 8 cut(s) 310, 355, 360, 541, 1066, 1086, 1109, 1180
Bse3DI GCAATG 2 cut(s) 784, 879
BseDI CCNNGG 1 cut(s) 940
BseGI GGATG 2 cut(s) 679, 1310
BseMI GCAATG 2 cut(s) 784, 879
BseMII CTCAG 4 cut(s) 222, 972, 1086, 1376
BseNI ACTGG 8 cut(s) 310, 355, 360, 541, 1066, 1086, 1109, 1180
BseRI GAGGAG 1 cut(s) 439
BseSI GKGCMC 1 cut(s) 446
BseXI GCAGC 7 cut(s) 30, 354, 865, 904, 1180, 1407, 1410
BsgI GTGCAG 1 cut(s) 517
BshFI GGCC 3 cut(s) 29, 80, 104
BshNI GGYRCC 1 cut(s) 218
BsiHKAI GWGCWC 3 cut(s) 148, 381, 446
BsiHKCI CYCGRG 2 cut(s) 147, 729
BsiSI CCGG 2 cut(s) 77, 169
BslFI GGGAC 2 cut(s) 819, 827
BsmAI GTCTC 4 cut(s) 54, 144, 1345, 1401
BsmFI GGGAC 2 cut(s) 819, 827
BsmI GAATGC 2 cut(s) 479, 608
BsnI GGCC 3 cut(s) 29, 80, 104
Bso31I GGTCTC 1 cut(s) 144
BsoBI CYCGRG 2 cut(s) 147, 729
Bsp1286I GDGCHC 4 cut(s) 148, 272, 381, 446
Bsp143I GATC 6 cut(s) 21, 226, 420, 910, 997, 1249
BspACI CCGC 7 cut(s) 4, 110, 188, 192, 275, 413, 1128
BspANI GGCC 3 cut(s) 29, 80, 104
BspCNI CTCAG 4 cut(s) 221, 971, 1087, 1377
BspLI GGNNCC 2 cut(s) 220, 816
BspMAI CTGCAG 2 cut(s) 344, 876
BspMI ACCTGC 1 cut(s) 338
BspPI GGATC 3 cut(s) 221, 415, 992
BspT107I GGYRCC 1 cut(s) 218
BspTNI GGTCTC 1 cut(s) 144
BsrDI GCAATG 2 cut(s) 784, 879
BsrFI RCCGGY 1 cut(s) 76
BsrI ACTGG 8 cut(s) 310, 355, 360, 541, 1066, 1086, 1109, 1180
BssAI RCCGGY 1 cut(s) 76
BssECI CCNNGG 1 cut(s) 940
BssMI GATC 6 cut(s) 21, 226, 420, 910, 997, 1249
BssNAI GTATAC 1 cut(s) 791
Bst1107I GTATAC 1 cut(s) 791
Bst4CI ACNGT 2 cut(s) 68, 720
Bst6I CTCTTC 1 cut(s) 607
BstAPI GCANNNNNTGC 3 cut(s) 339, 348, 901
BstBAI YACGTR 1 cut(s) 547
BstC8I GCNNGC 5 cut(s) 74, 78, 165, 190, 400
BstDEI CTNAG 5 cut(s) 208, 654, 958, 1095, 1385
BstF5I GGATG 2 cut(s) 679, 1310
BstHHI GCGC 1 cut(s) 559
BstKTI GATC 6 cut(s) 24, 229, 423, 913, 1000, 1252
BstMAI GTCTC 4 cut(s) 54, 144, 1345, 1401
BstMBI GATC 6 cut(s) 21, 226, 420, 910, 997, 1249
BstMWI GCNNNNNNNGC 7 cut(s) 35, 169, 339, 348, 901, 1133, 1420
BstNSI RCATGY 1 cut(s) 1414
BstSCI CCNGG 1 cut(s) 167
BstSFI CTRYAG 2 cut(s) 340, 872
BstSLI GKGCMC 1 cut(s) 446
BstSNI TACGTA 1 cut(s) 547
BstV1I GCAGC 7 cut(s) 30, 354, 865, 904, 1180, 1407, 1410
BstX2I RGATCY 1 cut(s) 1249
BstXI CCANNNNNNTGG 2 cut(s) 362, 1090
BstYI RGATCY 1 cut(s) 1249
BstZ17I GTATAC 1 cut(s) 791
BsuRI GGCC 3 cut(s) 29, 80, 104
BtsCI GGATG 2 cut(s) 679, 1310
BtsIMutI CAGTG 3 cut(s) 367, 500, 1073
BveI ACCTGC 1 cut(s) 338
Cac8I GCNNGC 5 cut(s) 74, 78, 165, 190, 400
CfoI GCGC 1 cut(s) 559
Cfr10I RCCGGY 1 cut(s) 76
Cfr13I GGNCC 1 cut(s) 102
Csp6I GTAC 2 cut(s) 630, 1173
CviAII CATG 3 cut(s) 571, 1168, 1411
CviQI GTAC 2 cut(s) 630, 1173
DdeI CTNAG 5 cut(s) 208, 654, 958, 1095, 1385
DpnI GATC 6 cut(s) 23, 228, 422, 912, 999, 1251
DpnII GATC 6 cut(s) 21, 226, 420, 910, 997, 1249
DraI TTTAAA 1 cut(s) 867
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 1 cut(s) 607
EarI CTCTTC 1 cut(s) 607
EciI GGCGGA 2 cut(s) 99, 264
Ecl136II GAGCTC 2 cut(s) 146, 379
Eco105I TACGTA 1 cut(s) 547
Eco24I GRGCYC 3 cut(s) 148, 272, 381
Eco31I GGTCTC 1 cut(s) 144
Eco53kI GAGCTC 2 cut(s) 146, 379
Eco57I CTGAAG 1 cut(s) 1005
Eco88I CYCGRG 2 cut(s) 147, 729
EcoICRI GAGCTC 2 cut(s) 146, 379
EcoRI GAATTC 1 cut(s) 284
EcoT38I GRGCYC 3 cut(s) 148, 272, 381
FaeI CATG 3 cut(s) 574, 1171, 1414
FaqI GGGAC 2 cut(s) 819, 827
FatI CATG 3 cut(s) 570, 1167, 1410
FauI CCCGC 2 cut(s) 181, 406
FbaI TGATCA 1 cut(s) 910
FblI GTMKAC 3 cut(s) 63, 201, 790
Fnu4HI GCNGC 9 cut(s) 44, 193, 343, 854, 918, 1128, 1194, 1396, 1424
FokI GGATG 2 cut(s) 686, 1317
FriOI GRGCYC 3 cut(s) 148, 272, 381
Fsp4HI GCNGC 9 cut(s) 44, 193, 343, 854, 918, 1128, 1194, 1396, 1424
FspBI CTAG 3 cut(s) 95, 1182, 1353
GlaI GCGC 1 cut(s) 558
GluI GCNGC 9 cut(s) 44, 193, 343, 854, 918, 1128, 1194, 1396, 1424
GsuI CTGGAG 1 cut(s) 1092
HaeIII GGCC 3 cut(s) 29, 80, 104
HapII CCGG 2 cut(s) 77, 169
HhaI GCGC 1 cut(s) 559
Hin1II CATG 3 cut(s) 574, 1171, 1414
Hin6I GCGC 1 cut(s) 557
HinP1I GCGC 1 cut(s) 557
HincII GTYRAC 3 cut(s) 202, 408, 955
HindII GTYRAC 3 cut(s) 202, 408, 955
HindIII AAGCTT 1 cut(s) 990
HinfI GANTC 8 cut(s) 115, 123, 156, 366, 392, 574, 956, 1042
HpaII CCGG 2 cut(s) 77, 169
HphI GGTGA 4 cut(s) 110, 815, 916, 1246
Hpy166II GTNNAC 7 cut(s) 64, 202, 365, 408, 444, 791, 955
Hpy188I TCNGA 9 cut(s) 21, 143, 226, 297, 371, 433, 486, 553, 1218
Hpy188III TCNNGA 6 cut(s) 95, 149, 729, 960, 1404, 1450
Hpy8I GTNNAC 7 cut(s) 64, 202, 365, 408, 444, 791, 955
Hpy99I CGWCG 3 cut(s) 38, 239, 242
HpyAV CCTTC 4 cut(s) 209, 760, 1181, 1213
HpyCH4III ACNGT 2 cut(s) 68, 720
HpyCH4IV ACGT 3 cut(s) 183, 234, 546
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 169, 339, 348, 901, 1133, 1420
HpyF3I CTNAG 5 cut(s) 208, 654, 958, 1095, 1385
HpySE526I ACGT 3 cut(s) 183, 234, 546
Hsp92II CATG 3 cut(s) 574, 1171, 1414
HspAI GCGC 1 cut(s) 557
KroI GCCGGC 1 cut(s) 76
KroNI GCCGGC 1 cut(s) 78
Ksp22I TGATCA 1 cut(s) 910
Kzo9I GATC 6 cut(s) 21, 226, 420, 910, 997, 1249
LmnI GCTCC 2 cut(s) 22, 814
Lsp1109I GCAGC 7 cut(s) 30, 354, 865, 904, 1180, 1407, 1410
LweI GCATC 3 cut(s) 544, 1145, 1443
MaeI CTAG 3 cut(s) 95, 1182, 1353
MaeII ACGT 3 cut(s) 183, 234, 546
MaeIII GTNAC 8 cut(s) 116, 311, 500, 736, 846, 1039, 1234, 1345
MalI GATC 6 cut(s) 23, 228, 422, 912, 999, 1251
MboI GATC 6 cut(s) 21, 226, 420, 910, 997, 1249
MboII GAAGA 3 cut(s) 594, 998, 1169
MfeI CAATTG 1 cut(s) 906
MflI RGATCY 1 cut(s) 1249
MhlI GDGCHC 4 cut(s) 148, 272, 381, 446
MluCI AATT 9 cut(s) 263, 284, 334, 372, 382, 862, 906, 1239, 1437
MlyI GAGTC 6 cut(s) 124, 132, 165, 360, 950, 1036
MmeI TCCRAC 1 cut(s) 151
MroNI GCCGGC 1 cut(s) 76
MseI TTAA 1 cut(s) 866
MspA1I CMGCKG 3 cut(s) 1025, 1130, 1384
MspI CCGG 2 cut(s) 77, 169
MspR9I CCNGG 1 cut(s) 169
MunI CAATTG 1 cut(s) 906
Mva1269I GAATGC 2 cut(s) 479, 608
MwoI GCNNNNNNNGC 7 cut(s) 35, 169, 339, 348, 901, 1133, 1420
NaeI GCCGGC 1 cut(s) 78
NciI CCSGG 1 cut(s) 169
NdeII GATC 6 cut(s) 21, 226, 420, 910, 997, 1249
NgoMIV GCCGGC 1 cut(s) 76
NlaIII CATG 3 cut(s) 574, 1171, 1414
NlaIV GGNNCC 2 cut(s) 220, 816
NmeAIII GCCGAG 2 cut(s) 138, 965
NmuCI GTSAC 5 cut(s) 116, 311, 846, 1039, 1234
NspI RCATGY 1 cut(s) 1414
PaeR7I CTCGAG 2 cut(s) 147, 729
PctI GAATGC 2 cut(s) 479, 608
PdiI GCCGGC 1 cut(s) 78
PfeI GAWTC 2 cut(s) 392, 574
PflFI GACNNNGTC 1 cut(s) 155
PkrI GCNGC 9 cut(s) 45, 194, 344, 855, 919, 1129, 1195, 1397, 1425
PleI GAGTC 6 cut(s) 123, 131, 164, 360, 950, 1036
PpsI GAGTC 6 cut(s) 123, 131, 164, 360, 950, 1036
Ppu21I YACGTR 1 cut(s) 547
PsiI TTATAA 1 cut(s) 861
Psp124BI GAGCTC 2 cut(s) 148, 381
PspN4I GGNNCC 2 cut(s) 220, 816
PspPI GGNCC 1 cut(s) 102
PstI CTGCAG 2 cut(s) 344, 876
PsuI RGATCY 1 cut(s) 1249
PsyI GACNNNGTC 1 cut(s) 155
PvuII CAGCTG 2 cut(s) 1025, 1384
RsaI GTAC 2 cut(s) 631, 1174
RsaNI GTAC 2 cut(s) 630, 1173
SacI GAGCTC 2 cut(s) 148, 381
SalI GTCGAC 1 cut(s) 200
SaqAI TTAA 1 cut(s) 866
SatI GCNGC 9 cut(s) 44, 193, 343, 854, 918, 1128, 1194, 1396, 1424
Sau3AI GATC 6 cut(s) 21, 226, 420, 910, 997, 1249
Sau96I GGNCC 1 cut(s) 102
SchI GAGTC 6 cut(s) 124, 132, 165, 360, 950, 1036
ScrFI CCNGG 1 cut(s) 169
SduI GDGCHC 4 cut(s) 148, 272, 381, 446
SfaNI GCATC 3 cut(s) 544, 1145, 1443
SfcI CTRYAG 2 cut(s) 340, 872
Sfr274I CTCGAG 2 cut(s) 147, 729
SlaI CTCGAG 2 cut(s) 147, 729
SmiI ATTTAAAT 1 cut(s) 867
SmlI CTYRAG 2 cut(s) 147, 729
SmoI CTYRAG 2 cut(s) 147, 729
SnaBI TACGTA 1 cut(s) 547
Sse9I AATT 9 cut(s) 263, 284, 334, 372, 382, 862, 906, 1239, 1437
SsiI CCGC 7 cut(s) 4, 110, 188, 192, 275, 413, 1128
SspI AATATT 2 cut(s) 823, 900
SspMI CTAG 3 cut(s) 95, 1182, 1353
SstI GAGCTC 2 cut(s) 148, 381
StyD4I CCNGG 1 cut(s) 167
SwaI ATTTAAAT 1 cut(s) 867
TaaI ACNGT 2 cut(s) 68, 720
TaiI ACGT 3 cut(s) 186, 237, 549
TaqI TCGA 5 cut(s) 132, 148, 201, 213, 730
TaqII GACCGA 1 cut(s) 168
TasI AATT 9 cut(s) 263, 284, 334, 372, 382, 862, 906, 1239, 1437
TauI GCSGC 2 cut(s) 195, 1130
TfiI GAWTC 2 cut(s) 392, 574
Tru1I TTAA 1 cut(s) 866
Tru9I TTAA 1 cut(s) 866
TscAI CASTG 3 cut(s) 367, 500, 1073
TseFI GTSAC 5 cut(s) 116, 311, 846, 1039, 1234
TseI GCWGC 7 cut(s) 43, 342, 853, 917, 1193, 1395, 1423
Tsp45I GTSAC 5 cut(s) 116, 311, 846, 1039, 1234
TspDTI ATGAA 1 cut(s) 453
TspGWI ACGGA 2 cut(s) 22, 1312
TspRI CASTG 3 cut(s) 367, 500, 1073
Tth111I GACNNNGTC 1 cut(s) 155
VneI GTGCAC 1 cut(s) 442
XapI RAATTY 1 cut(s) 284
XbaI TCTAGA 1 cut(s) 94
XceI RCATGY 1 cut(s) 1414
XcmI CCANNNNNNNNNTGG 1 cut(s) 262
XhoI CTCGAG 2 cut(s) 147, 729
XmiI GTMKAC 3 cut(s) 63, 201, 790
XspI CTAG 3 cut(s) 95, 1182, 1353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.