Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003711

Physical Location & Seq

Genomic Coordinates Reverse (-)

949691 .. 954123

Gene Structure 4433 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G007500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGCAGGGCTTGAAGGCTCGGATCCTGGCCTCCGTCGCCGTGCTGCTGTCTCTTGTCTACTGTGGCTTGACCACGCCGTCCACCTTTCTTTCCTTAGAACGGGTTTATCCGCCGAGTCACCACGGACAGATTGAGCAGCTCCGAGCTCATGACCGAGTCAGGCACGCCCGACTCTTACAAAACTTGACGGGCAGCGTTGTGGACTTCCCACTCCACGGCACCTCCGATCCGAACTTGGCCGGGCTTTATTATACCAAAGTCAAATTGGGCTCTCCGCCAAAAGAATTCAACGTGCAGATTGACACTGGAAGTGAAAACTTGTGGGTTACCTGCAATTCCTGCAGTGATTGCCCCCGGACTACTTGGCTTCCCATTCAGCTCAGTTCCTATGATTCTAACAGCTCATCAACTGCACGGTTGATCCCCTGTTCAATGTGCACCTCCGCATTTCAAGCCAAATGTTCTCCTCAGACTAACCAGTGCAGTTACACTACTCAATATGCAGATGGAAGTGGGATATTTGGTCATTACGTATCGGATACACTACATTTTGACCGGATTCAGGGGCAATCCTATATTGACTCTTCAGCATCCATTATTTTTGGGTGCACTACCTATGAGTTTGGGGGTTTGACTAGTTCACTTTCAACACTGGATGGGATATTTGGGTTTAGCCAAGGGCCTCTGTCTGTTATATCGCAGTTGTCATCTCGAGGGTTGACTCCCAAAGTGTTCTCTCATTGTTTGAAGGGAGATGAAAAAGGAGGGGGCATACTTGCTCTTGGTGAGATTTTGGAGCCAAGTATTGTTTACAGTCCTCTTGTTCCACCACGGCACCATTATTATTTAAATCTGCAGAGCATTGCTGTAAATGGGAAAATCCTGCCAATTGATCCAGCAACCTTCACAGCACACGATAGAGGAACTATTATCGACTCAGGAACAACTTTGGCATTCCTTGTTGAAGATGCTTACGTTCCTTTCGTTCATGCGATAACTTCAGCTGTTTCACCATCCCTGACTCCCTTCATTTCAGACGAAAACCAGTGTTATCATGTAACCACCAGTTTGGCTGAGGTTTTTCCTGCTGTTAGTCTAAACTTTGTTGGTGCATCAATGGTGTTGAAACCAGAAGAGTACCTTATACGTCAAATAGGCATTGGTGTGTGGTGCATTGGTTTTCAAAAGGCTCAAGGAGGGGTGACAATCTTAGGAGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

407

Amino Acids

43.8

Weight (kDa)

6.09

Isoelectric Point (pI)

38.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36670 AT2G36670 AT2G36670 AT2G36670
fragaria_vesca	FvH4_6g17290 FvH4_6g17290
malus_domestica	MD09G1292800.v1.1 MD12G1102500.v1.1 MD14G1096400.v1.1 MD16G1113800.v1.1 MD17G1282200.v1.1 MD17G1282300.v1.1 MD17G1282800.v1.1 MD17G1283200.v1.1
prunus_persica	Prupe.7G007000_v2.0.a1 Prupe.7G007500_v2.0.a1 Prupe.7G122500_v2.0.a1 Prupe.7G122500_v2.0.a1
pyrus_communis	pycom06g08820 pycom09g07760 pycom09g19650 pycom12g10050 pycom14g09440 pycom16g09750 pycom17g27920
rosa_chinensis	RchiOBHm_Chr3g0471401
rosa_laevigata	RLG00000024180
rosa_roxburghii	Rroxscaffold_6G00409970
rosa_rugosa	Rorug03G0117700
rosa_samantha	Rh3AG167400 Rh3BG192900 Rh3CG183300 Rh3DG182600
rosa_wichuraiana	Rw3G015770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	76
Acc36I	ACCTGC	1 cut(s)	338
AccB1I	GGYRCC	2 cut(s)	218, 834
AccI	GTMKAC	1 cut(s)	57
AciI	CCGC	3 cut(s)	110, 275, 444
AclWI	GGATC	5 cut(s)	16, 29, 221, 415, 887
AcoI	YGGCCR	1 cut(s)	237
AcsI	RAATTY	1 cut(s)	284
AcuI	CTGAAG	2 cut(s)	570, 984
AfaI	GTAC	1 cut(s)	1139
AfiI	CCNNNNNNNGG	3 cut(s)	99, 215, 562
AgsI	TTSAA	9 cut(s)	13, 289, 432, 452, 648, 748, 965, 1126, 1184
AhlI	ACTAGT	1 cut(s)	635
AjnI	CCWGG	1 cut(s)	24
AluBI	AGCT	5 cut(s)	139, 146, 379, 402, 1004
AluI	AGCT	5 cut(s)	139, 146, 379, 402, 1004
Alw21I	GWGCWC	3 cut(s)	148, 440, 611
Alw26I	GTCTC	1 cut(s)	54
Alw44I	GTGCAC	2 cut(s)	436, 607
AlwI	GGATC	5 cut(s)	16, 29, 221, 415, 887
Ama87I	CYCGRG	1 cut(s)	711
AoxI	GGCC	3 cut(s)	27, 237, 680
ApaLI	GTGCAC	2 cut(s)	436, 607
ApeKI	GCWGC	3 cut(s)	43, 136, 192
ApoI	RAATTY	1 cut(s)	284
AspS9I	GGNCC	1 cut(s)	680
AsuC2I	CCSGG	2 cut(s)	241, 355
AsuHPI	GGTGA	4 cut(s)	110, 797, 1002, 1213
AvaI	CYCGRG	1 cut(s)	711
BaeGI	GKGCMC	2 cut(s)	440, 611
BamHI	GGATCC	1 cut(s)	21
BanI	GGYRCC	2 cut(s)	218, 834
BanII	GRGCYC	2 cut(s)	148, 272
Bbv12I	GWGCWC	3 cut(s)	148, 440, 611
BbvCI	CCTCAGC	1 cut(s)	1074
BbvI	GCAGC	3 cut(s)	30, 148, 204
BccI	CCATC	3 cut(s)	500, 650, 1021
BceAI	ACGGC	4 cut(s)	23, 61, 232, 848
BciT130I	CCWGG	1 cut(s)	26
BciVI	GTATCC	1 cut(s)	532
BcnI	CCSGG	2 cut(s)	241, 355
BcoDI	GTCTC	1 cut(s)	54
BcuI	ACTAGT	1 cut(s)	635
BfaI	CTAG	1 cut(s)	636
BfmI	CTRYAG	2 cut(s)	340, 854
BfuAI	ACCTGC	1 cut(s)	338
BfuI	GTATCC	1 cut(s)	532
BisI	GCNGC	3 cut(s)	44, 137, 193
BlsI	GCNGC	3 cut(s)	45, 138, 194
Bme1390I	CCNGG	3 cut(s)	26, 241, 355
BmeT110I	CYCGRG	1 cut(s)	711
BmgT120I	GGNCC	1 cut(s)	680
BmiI	GGNNCC	4 cut(s)	23, 220, 798, 836
BmrFI	CCNGG	3 cut(s)	26, 241, 355
BmsI	GCATC	3 cut(s)	599, 958, 1121
Bpu10I	CCTNAGC	1 cut(s)	1074
BpuEI	CTTGAG	1 cut(s)	1176
BpuMI	CCSGG	2 cut(s)	241, 355
BsaAI	YACGTR	1 cut(s)	532
BsaJI	CCNNGG	5 cut(s)	121, 214, 353, 676, 830
BsaWI	WCCGGW	1 cut(s)	555
BsaXI	ACNNNNNCTCC	2 cut(s)	206, 236
Bsc4I	CCNNNNNNNGG	3 cut(s)	99, 215, 562
Bse1I	ACTGG	5 cut(s)	310, 478, 657, 1045, 1065
Bse3DI	GCAATG	1 cut(s)	861
BseBI	CCWGG	1 cut(s)	26
BseDI	CCNNGG	5 cut(s)	121, 214, 353, 676, 830
BseGI	GGATG	3 cut(s)	590, 661, 1013
BseLI	CCNNNNNNNGG	3 cut(s)	99, 215, 562
BseMI	GCAATG	1 cut(s)	861
BseMII	CTCAG	4 cut(s)	394, 482, 951, 1065
BseNI	ACTGG	5 cut(s)	310, 478, 657, 1045, 1065
BseRI	GAGGAG	1 cut(s)	456
BseSI	GKGCMC	2 cut(s)	440, 611
BseXI	GCAGC	3 cut(s)	30, 148, 204
BsgI	GTGCAG	3 cut(s)	314, 396, 502
BshFI	GGCC	3 cut(s)	29, 239, 682
BshNI	GGYRCC	2 cut(s)	218, 834
BsiHKAI	GWGCWC	3 cut(s)	148, 440, 611
BsiHKCI	CYCGRG	1 cut(s)	711
BsiSI	CCGG	3 cut(s)	240, 355, 556
BslI	CCNNNNNNNGG	3 cut(s)	99, 215, 562
BsmAI	GTCTC	1 cut(s)	54
BsmI	GAATGC	1 cut(s)	953
BsnI	GGCC	3 cut(s)	29, 239, 682
BsoBI	CYCGRG	1 cut(s)	711
Bsp1286I	GDGCHC	4 cut(s)	148, 272, 440, 611
Bsp143I	GATC	4 cut(s)	21, 226, 420, 892
BspACI	CCGC	3 cut(s)	110, 275, 444
BspANI	GGCC	3 cut(s)	29, 239, 682
BspCNI	CTCAG	4 cut(s)	393, 481, 950, 1066
BspHI	TCATGA	1 cut(s)	148
BspLI	GGNNCC	4 cut(s)	23, 220, 798, 836
BspMAI	CTGCAG	2 cut(s)	344, 858
BspMI	ACCTGC	1 cut(s)	338
BspPI	GGATC	5 cut(s)	16, 29, 221, 415, 887
BspT107I	GGYRCC	2 cut(s)	218, 834
BsrDI	GCAATG	1 cut(s)	861
BsrI	ACTGG	5 cut(s)	310, 478, 657, 1045, 1065
BssECI	CCNNGG	5 cut(s)	121, 214, 353, 676, 830
BssMI	GATC	4 cut(s)	21, 226, 420, 892
BssT1I	CCWWGG	1 cut(s)	676
Bst2UI	CCWGG	1 cut(s)	26
Bst4CI	ACNGT	3 cut(s)	62, 417, 815
Bst6I	CTCTTC	2 cut(s)	589, 1128
BstAPI	GCANNNNNTGC	2 cut(s)	339, 348
BstBAI	YACGTR	1 cut(s)	532
BstC8I	GCNNGC	1 cut(s)	165
BstDEI	CTNAG	6 cut(s)	94, 380, 468, 937, 1074, 1210
BstDSI	CCRYGG	3 cut(s)	121, 214, 830
BstEII	GGTNACC	1 cut(s)	325
BstF5I	GGATG	3 cut(s)	590, 661, 1013
BstKTI	GATC	4 cut(s)	24, 229, 423, 895
BstMAI	GTCTC	1 cut(s)	54
BstMBI	GATC	4 cut(s)	21, 226, 420, 892
BstMWI	GCNNNNNNNGC	4 cut(s)	35, 339, 348, 452
BstNI	CCWGG	1 cut(s)	26
BstPI	GGTNACC	1 cut(s)	325
BstSCI	CCNGG	3 cut(s)	24, 239, 353
BstSFI	CTRYAG	2 cut(s)	340, 854
BstSLI	GKGCMC	2 cut(s)	440, 611
BstSNI	TACGTA	1 cut(s)	532
BstV1I	GCAGC	3 cut(s)	30, 148, 204
BstX2I	RGATCY	1 cut(s)	21
BstXI	CCANNNNNNTGG	1 cut(s)	1069
BstYI	RGATCY	1 cut(s)	21
BsuI	GTATCC	1 cut(s)	532
BsuRI	GGCC	3 cut(s)	29, 239, 682
BtgI	CCRYGG	3 cut(s)	121, 214, 830
BtsCI	GGATG	3 cut(s)	590, 661, 1013
BtsI	GCAGTG	1 cut(s)	349
BtsIMutI	CAGTG	5 cut(s)	303, 349, 485, 650, 1052
BveI	ACCTGC	1 cut(s)	338
Cac8I	GCNNGC	1 cut(s)	165
CciI	TCATGA	1 cut(s)	148
Cfr13I	GGNCC	1 cut(s)	680
Csp6I	GTAC	1 cut(s)	1138
CviAII	CATG	3 cut(s)	149, 989, 1055
CviQI	GTAC	1 cut(s)	1138
DdeI	CTNAG	6 cut(s)	94, 380, 468, 937, 1074, 1210
DpnI	GATC	4 cut(s)	23, 228, 422, 894
DpnII	GATC	4 cut(s)	21, 226, 420, 892
DraI	TTTAAA	1 cut(s)	849
DrdI	GACNNNNNNGTC	1 cut(s)	76
DseDI	GACNNNNNNGTC	1 cut(s)	76
EaeI	YGGCCR	1 cut(s)	237
Eam1104I	CTCTTC	2 cut(s)	589, 1128
EarI	CTCTTC	2 cut(s)	589, 1128
EciI	GGCGGA	2 cut(s)	99, 264
Ecl136II	GAGCTC	1 cut(s)	146
Eco105I	TACGTA	1 cut(s)	532
Eco130I	CCWWGG	1 cut(s)	676
Eco24I	GRGCYC	2 cut(s)	148, 272
Eco53kI	GAGCTC	1 cut(s)	146
Eco57I	CTGAAG	2 cut(s)	570, 984
Eco88I	CYCGRG	1 cut(s)	711
Eco91I	GGTNACC	1 cut(s)	325
EcoICRI	GAGCTC	1 cut(s)	146
EcoO109I	RGGNCCY	1 cut(s)	680
EcoO65I	GGTNACC	1 cut(s)	325
EcoRI	GAATTC	1 cut(s)	284
EcoRII	CCWGG	1 cut(s)	24
EcoT14I	CCWWGG	1 cut(s)	676
EcoT38I	GRGCYC	2 cut(s)	148, 272
ErhI	CCWWGG	1 cut(s)	676
FaeI	CATG	3 cut(s)	152, 992, 1058
FalI	AAGNNNNNCTT	2 cut(s)	1125, 1157
FatI	CATG	3 cut(s)	148, 988, 1054
FblI	GTMKAC	1 cut(s)	57
Fnu4HI	GCNGC	3 cut(s)	44, 137, 193
FokI	GGATG	3 cut(s)	577, 668, 1000
FriOI	GRGCYC	2 cut(s)	148, 272
Fsp4HI	GCNGC	3 cut(s)	44, 137, 193
FspBI	CTAG	1 cut(s)	636
GluI	GCNGC	3 cut(s)	44, 137, 193
HaeIII	GGCC	3 cut(s)	29, 239, 682
HapII	CCGG	3 cut(s)	240, 355, 556
Hin1II	CATG	3 cut(s)	152, 992, 1058
HincII	GTYRAC	1 cut(s)	720
HindII	GTYRAC	1 cut(s)	720
HinfI	GANTC	9 cut(s)	115, 156, 171, 392, 559, 581, 721, 935, 1021
HpaII	CCGG	3 cut(s)	240, 355, 556
HphI	GGTGA	4 cut(s)	110, 797, 1002, 1213
Hpy166II	GTNNAC	8 cut(s)	58, 81, 202, 438, 609, 641, 720, 811
Hpy188I	TCNGA	7 cut(s)	21, 143, 226, 231, 471, 538, 1036
Hpy188III	TCNNGA	3 cut(s)	149, 711, 939
Hpy8I	GTNNAC	8 cut(s)	58, 81, 202, 438, 609, 641, 720, 811
Hpy99I	CGWCG	1 cut(s)	38
HpyAV	CCTTC	4 cut(s)	7, 742, 913, 1036
HpyCH4III	ACNGT	3 cut(s)	62, 417, 815
HpyCH4IV	ACGT	4 cut(s)	291, 531, 975, 1147
HpyF10VI	GCNNNNNNNGC	4 cut(s)	35, 339, 348, 452
HpyF3I	CTNAG	6 cut(s)	94, 380, 468, 937, 1074, 1210
HpySE526I	ACGT	4 cut(s)	291, 531, 975, 1147
Hsp92II	CATG	3 cut(s)	152, 992, 1058
Kzo9I	GATC	4 cut(s)	21, 226, 420, 892
LmnI	GCTCC	2 cut(s)	144, 796
Lsp1109I	GCAGC	3 cut(s)	30, 148, 204
LweI	GCATC	3 cut(s)	599, 958, 1121
MaeI	CTAG	1 cut(s)	636
MaeII	ACGT	4 cut(s)	291, 531, 975, 1147
MaeIII	GTNAC	5 cut(s)	116, 325, 485, 1057, 1201
MalI	GATC	4 cut(s)	23, 228, 422, 894
MboI	GATC	4 cut(s)	21, 226, 420, 892
MboII	GAAGA	3 cut(s)	576, 977, 1145
MfeI	CAATTG	1 cut(s)	888
MflI	RGATCY	1 cut(s)	21
MhlI	GDGCHC	4 cut(s)	148, 272, 440, 611
MluCI	AATT	4 cut(s)	263, 284, 334, 888
MlyI	GAGTC	7 cut(s)	124, 165, 165, 575, 715, 929, 1015
MseI	TTAA	1 cut(s)	848
MslI	CAYNNNNRTG	1 cut(s)	1163
MspA1I	CMGCKG	1 cut(s)	1004
MspI	CCGG	3 cut(s)	240, 355, 556
MspR9I	CCNGG	3 cut(s)	26, 241, 355
MunI	CAATTG	1 cut(s)	888
Mva1269I	GAATGC	1 cut(s)	953
MvaI	CCWGG	1 cut(s)	26
MwoI	GCNNNNNNNGC	4 cut(s)	35, 339, 348, 452
NciI	CCSGG	2 cut(s)	241, 355
NdeII	GATC	4 cut(s)	21, 226, 420, 892
NlaIII	CATG	3 cut(s)	152, 992, 1058
NlaIV	GGNNCC	4 cut(s)	23, 220, 798, 836
NmeAIII	GCCGAG	1 cut(s)	138
NmuCI	GTSAC	2 cut(s)	116, 1201
PaeR7I	CTCGAG	1 cut(s)	711
PagI	TCATGA	1 cut(s)	148
PcsI	WCGNNNNNNNCGW	2 cut(s)	222, 981
PctI	GAATGC	1 cut(s)	953
PfeI	GAWTC	2 cut(s)	392, 559
PflFI	GACNNNGTC	1 cut(s)	155
PkrI	GCNGC	3 cut(s)	45, 138, 194
PleI	GAGTC	7 cut(s)	123, 164, 165, 575, 715, 929, 1015
PpsI	GAGTC	7 cut(s)	123, 164, 165, 575, 715, 929, 1015
Ppu21I	YACGTR	1 cut(s)	532
Psp124BI	GAGCTC	1 cut(s)	148
Psp6I	CCWGG	1 cut(s)	24
PspEI	GGTNACC	1 cut(s)	325
PspGI	CCWGG	1 cut(s)	24
PspN4I	GGNNCC	4 cut(s)	23, 220, 798, 836
PspPI	GGNCC	1 cut(s)	680
PstI	CTGCAG	2 cut(s)	344, 858
PsuI	RGATCY	1 cut(s)	21
PsyI	GACNNNGTC	1 cut(s)	155
PvuII	CAGCTG	1 cut(s)	1004
RsaI	GTAC	1 cut(s)	1139
RsaNI	GTAC	1 cut(s)	1138
RseI	CAYNNNNRTG	1 cut(s)	1163
SacI	GAGCTC	1 cut(s)	148
SaqAI	TTAA	1 cut(s)	848
SatI	GCNGC	3 cut(s)	44, 137, 193
Sau3AI	GATC	4 cut(s)	21, 226, 420, 892
Sau96I	GGNCC	1 cut(s)	680
SchI	GAGTC	7 cut(s)	124, 165, 165, 575, 715, 929, 1015
ScrFI	CCNGG	3 cut(s)	26, 241, 355
SduI	GDGCHC	4 cut(s)	148, 272, 440, 611
SfaNI	GCATC	3 cut(s)	599, 958, 1121
SfcI	CTRYAG	2 cut(s)	340, 854
Sfr274I	CTCGAG	1 cut(s)	711
SlaI	CTCGAG	1 cut(s)	711
SmiI	ATTTAAAT	1 cut(s)	849
SmiMI	CAYNNNNRTG	1 cut(s)	1163
SmlI	CTYRAG	2 cut(s)	711, 1191
SmoI	CTYRAG	2 cut(s)	711, 1191
SnaBI	TACGTA	1 cut(s)	532
SpeI	ACTAGT	1 cut(s)	635
Sse9I	AATT	4 cut(s)	263, 284, 334, 888
SsiI	CCGC	3 cut(s)	110, 275, 444
SspMI	CTAG	1 cut(s)	636
SstI	GAGCTC	1 cut(s)	148
StyD4I	CCNGG	3 cut(s)	24, 239, 353
StyI	CCWWGG	1 cut(s)	676
SwaI	ATTTAAAT	1 cut(s)	849
TaaI	ACNGT	3 cut(s)	62, 417, 815
TaiI	ACGT	4 cut(s)	294, 534, 978, 1150
TaqI	TCGA	2 cut(s)	712, 933
TaqII	GACCGA	1 cut(s)	168
TasI	AATT	4 cut(s)	263, 284, 334, 888
TfiI	GAWTC	2 cut(s)	392, 559
Tru1I	TTAA	1 cut(s)	848
Tru9I	TTAA	1 cut(s)	848
TscAI	CASTG	5 cut(s)	310, 349, 485, 657, 1052
TseFI	GTSAC	2 cut(s)	116, 1201
TseI	GCWGC	3 cut(s)	43, 136, 192
Tsp45I	GTSAC	2 cut(s)	116, 1201
TspDTI	ATGAA	3 cut(s)	771, 977, 1018
TspGWI	ACGGA	2 cut(s)	22, 138
TspRI	CASTG	5 cut(s)	310, 349, 485, 657, 1052
Tth111I	GACNNNGTC	1 cut(s)	155
VneI	GTGCAC	2 cut(s)	436, 607
XapI	RAATTY	1 cut(s)	284
XcmI	CCANNNNNNNNNTGG	1 cut(s)	262
XhoI	CTCGAG	1 cut(s)	711
XmiI	GTMKAC	1 cut(s)	57
XspI	CTAG	1 cut(s)	636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.