AT2G37670

WD domain, G-beta repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0012301
Physical Location & Seq
Reverse (-)
15797210 .. 15800796
3587 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G37670.2

Sequence Viewer

Length: 2712 bp
ATGGAAGATGGAAACAAATTGGATCGGAAGAAGACAATGACGATGAACTGGGAAGGATTAGGAGATTTTGAAGATGAAGATGATGATAGATTCTTCGAAACTCATGATCGTCTCTCTTCTGCTTTAACTTTCGACATGGCTAATGCTTCTTCTTCCGATGAAGATGAAGATTTCGACGATTGTCGACTCTCGTTTTCTTCAGCCGTCTCTTCCTTAACCACCGCCTCTAGGAAATTTCGTACGCCGGCGATGTCTCCTGATTACGATATTTGGATGGCTGCTCCGGGATCTATATCTGAGCGTCGTCGTCGTCTTCTCCATGGGATGGGACTTGCTAGTAATAAAGATATGGTTAGTGCTGTTTCCATTCGTCGCGTTGTTTCTAATGCGCCTGTTGTTAGTAACGGTGAAGAAAAGAAGATGAAGAAGAAGATGAATCATGAGGTTGATGAACAAGATCATGATCATGTTCCGGTTATGCTTGCGAGGTCAAGATCGGAATCAGATATTGAGAGGTTCTTGATTGAGAAACGAAGAAAAGAAGAGATTTTAGGGAAAATCTCAAAGCAGCGTCTTACAAGAACGTATTCTACTATTTGTCCTACAAGGACAAGGATTTGTCAGTACCAAACTCCGATCAGACAAACACCTGCGGTTTGTGGAAATGGAAAAGCTTTGCGCGGTGGTGGAGAGGCGTTGACATCGGTAATGTCGAATGCGAGGGTTGGCGCGTTTTTCTTGATAAAGAATCTTGATACAGGGAAAGAGTTTATAGTGAATGAGTATGATGAAGATGGAATGTGGAATAGGCTTAGTGATCTGCAAACAGGGAAGCAATTAACTTTGGAGGAGTTTGAGAAATGTGTTGGTTATTCACCTGTGGTTAAAGAGCTTATGCGTAGAGAGAATGTGAATAGGATTAACTACGAACCGTTAATGGATCTTCGCAAGTTTAATTCGTATCTTTCCAAGAGTGTGAGGTTAAGTAAGAGAAGAGGAGCTGCATTGTTGAAGAACATTAAAGGTGTAGCTCATTCCATGAGTTTACGCGTTGCGGATAAAGATGTAAGCGATGGAAGCACTGATAGTCCGAAAAAGGGGAAAGATCATAAACATGGTAAAGCTAATGAGTGGGTGAAAGTTAGACCAACAGGGAAATCTTACAAGGAGTTAAGTGCTTTACATATGTGTCAAGAGATTCAAGCTCATGAGGGTGCGGTTTGGACTATCAAGTTTAGTCAAGATGCTCATTATCTAGCGAGCGGAGGAGCGGATAGAGTCATTCATGTGTGGGAGGTTCAAGAATGTGAACTAATGTCTATGAATGAAGGAAGTCTCACTCCTATTCATCCTTCACTTTGTGACTCTTCTGGAAATGAGATAACTGTGGTAGAGAAGAAAAAGAAAGGAAAGGGATCATCCGGGAGACGACACAATCATATTCCGGATTACGTACATGTTCCTGAAACAGTCTTCTCGTTTTCTGATAAGCCTGTTTGCTCTTTGAAAGGTCATCTGGATGCTATTTTGGATCTTTCATGGTCCAAATCTCAGCTTCTTCTTTCATCTTCTATGGACAAAACAGTCAGGTTATGGGATATAGAAACCAAAACATGTCTCAAACTGTTTGCCCATAATGACTATGTGACATGTATTCAGTTCAGTCCAGTGGATGAAAATTATTTCTTAAGTGGTTCACTTGACGCTAAAATAAGGATATGGAGCATACAAGATCGACATGTTGTGGAATGGAGTGATCTTCATGAAATGGTTACTGCTGCTTGCTACACACCAGACGGTCAGGGTGCACTTATCGGGTCACATAAAGGAATTTGTCGTGCTTACGATACAGAAGATTGTAAGCTGAGCCAAACTAATCAGATTGATGTTCAGAGCAACAAGAAATCACAAGCGAAAAGGAAGATCACTAGTTTTCAGTTTTCCCCGGTGAATCCATCTGAAGTTCTTGTCACATCCGCTGATTCACGGATTCGAATACTAGACGGTTCTGAAGTTATTCACAAATTCAAAGGCTTTAGAAACACATGTAGCCAACTCTCTGCTTCGTATAGCCAAGATGGGAAATACATAATATGTGCGAGTGAAGACTCTCAAGTTTACTTATGGAAGAATGACTTTCACCGAACAAGATCAACACTCACGACACAATCTCACGAACATTTTCATTGCAAAGATGTCTCAGCCGCTGTTCCTTGGCATGGTCATGTTAGAGGTGAGCCACCACCAGTTCAGATTCACTCTAAACGCCACTCAAAGCGCATATCTACTTCAAGCCAGCCTTCATCCACCATAAGCTCACCAACAAAAGAAGAAACCTCGGCGACTGGACCAACTACATCTAACCGGAATAAAAAATCAGGGTTACCTCCAATGCCTAAGAAAGCCGCTACAAAGAGTCAGATTCAACCAGAGGAAGAGGCAGGACCGGAGCTGGGAAGCAGTGAGTCGTTTCGGTCGAGTATGAACTCTTCGGAGCAGCATTCATCGAGGTTTGGGGAATCTCCATCGATAAACACATCGTCAAGGTTATCTTCTTGGTCATGGTTCGACAGTGGAGGGCATGGTCCGCAAACTATACAGCCAACGGCTTGGGGGATGGTGATTGTGACGGCTACAGTTCATGGTGAGATCCGATCTTATCAAAACTTTGGTTTACCGAGAAGAATCGGTCGCCAAACTACTCTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

903

Amino Acids

101.34

Weight (kDa)

8.66

Isoelectric Point (pI)

53.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_2nd PF25172 392 - 576 7.6e-17 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 393 - 442 1e-08 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 395 - 439 6.5e-06 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 397 - 436 4.8e-06 WDR3 first beta-propeller domain
WD40 PF00400 399 - 432 4.9e-07 WD domain, G-beta repeat
Beta-prop_WDR5 PF25175 401 - 445 3.3e-06 WDR5 beta-propeller domain
EIF3I PF24805 402 - 473 2.7e-06 EIF3I
WD40_CDC20-Fz PF24807 497 - 667 6.1e-14 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 497 - 577 5.7e-15 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 498 - 724 4.9e-38 WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 498 - 560 8e-09 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 498 - 622 9.3e-15 Prp19 WD40 domain
WD40 PF00400 498 - 534 4.4e-07 WD domain, G-beta repeat
WDR55 PF24796 500 - 625 2.1e-07 WDR55
Beta-prop_THOC3 PF25174 501 - 542 3.2e-07 THOC3 beta-propeller domain
Beta-prop_IFT122_1st PF23381 501 - 614 3.2e-07 IFT122 first beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 502 - 583 5.5e-12 CAF1B/HIR1 beta-propeller domain
Beta-prop_RIG_2nd PF23775 503 - 566 1.5e-06 RIG second beta-propeller
Beta-prop_Aladin PF25460 504 - 608 9.6e-12 Aladin seven-bladed propeller
Beta-prop_TEP1_2nd PF25047 504 - 578 1e-06 TEP-1 second beta-propeller
Beta-prop_THOC3 PF25174 508 - 721 1.1e-25 THOC3 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 513 - 723 1.4e-15 WDR3 second beta-propeller domain
WD40_Gbeta PF25391 520 - 619 3.7e-10 G protein beta WD-40 repeat protein
Beta-prop_WDR90_POC16_2nd PF23393 521 - 622 2.8e-08 WDR90/POC16, second beta-propeller
Beta-prop_EML PF23409 525 - 726 6.3e-07 Echinoderm microtubule-associated protein first beta-propeller
WD40_WDHD1_1st PF24817 549 - 725 8.8e-13 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 560 - 716 9.6e-14 Echinoderm microtubule-associated protein second beta-propeller
EIF3I PF24805 561 - 713 8.5e-06 EIF3I
Beta-prop_WDR3_1st PF25173 580 - 727 1.6e-06 WDR3 first beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012301)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37670 AT2G37670 AT5G02430
fragaria_vesca FvH4_6g13960
malus_domestica MD04G1127300.v1.1 MD12G1140500.v1.1
prunus_persica Prupe.6G253900_v2.0.a1 Prupe.6G253900_v2.0.a1
pyrus_communis pycom04g11410
rosa_chinensis RchiOBHm_Chr3g0466781
rosa_laevigata RLG00000024553
rosa_multiflora Rmu_sc0008017.1_g000009
rosa_roxburghii Rroxscaffold_6G00414170
rosa_rugosa Rorug03G0083800
rosa_samantha Rh3AG131000 Rh3BG152000 Rh3CG151900 Rh3DG152700
rosa_wichuraiana Rw3G012380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 658
AasI GACNNNNNNGTC 1 cut(s) 1583
Acc36I ACCTGC 1 cut(s) 658
AccB7I CCANNNNNTGG 1 cut(s) 325
AccBSI CCGCTC 2 cut(s) 1263, 1271
AccI GTMKAC 1 cut(s) 184
AccII CGCG 4 cut(s) 375, 681, 731, 1050
AccIII TCCGGA 1 cut(s) 1444
AclWI GGATC 6 cut(s) 30, 295, 948, 1423, 1539, 2644
AcsI RAATTY 3 cut(s) 233, 1830, 2024
AcuI CTGAAG 3 cut(s) 183, 1980, 2031
AdeI CACNNNGTG 1 cut(s) 1361
AfaI GTAC 3 cut(s) 241, 626, 1455
AfiI CCNNNNNNNGG 5 cut(s) 228, 325, 1097, 2219, 2453
AflII CTTAAG 1 cut(s) 1687
AflIII ACRYGT 6 cut(s) 1048, 1456, 1613, 1649, 1738, 2045
AgsI TTSAA 8 cut(s) 71, 1012, 1202, 1301, 1507, 2029, 2292, 2426
AhlI ACTAGT 1 cut(s) 1928
Alw21I GWGCWC 1 cut(s) 1810
Alw26I GTCTC 7 cut(s) 116, 211, 258, 1340, 1420, 1622, 2203
Alw44I GTGCAC 1 cut(s) 1806
AlwI GGATC 6 cut(s) 30, 295, 948, 1423, 1539, 2644
AlwNI CAGNNNCTG 1 cut(s) 2207
Aor13HI TCCGGA 1 cut(s) 1444
ApaLI GTGCAC 1 cut(s) 1806
ApeKI GCWGC 5 cut(s) 278, 568, 1001, 1778, 2497
ApoI RAATTY 3 cut(s) 233, 1830, 2024
Asp700I GAANNNNTTC 3 cut(s) 586, 2016, 2181
AspLEI GCGC 4 cut(s) 391, 681, 731, 2280
AspS9I GGNCC 4 cut(s) 1542, 2348, 2444, 2585
AsuC2I CCSGG 3 cut(s) 285, 1423, 1946
AsuHPI GGTGA 9 cut(s) 419, 867, 1147, 1960, 2132, 2246, 2310, 2632, 2657
AsuII TTCGAA 2 cut(s) 96, 1993
AvaII GGWCC 4 cut(s) 1542, 2348, 2444, 2585
BaeGI GKGCMC 1 cut(s) 1810
BarI GAAGNNNNNNTAC 2 cut(s) 2473, 2505
BbsI GAAGAC 4 cut(s) 38, 305, 1465, 2112
Bbv12I GWGCWC 1 cut(s) 1810
BbvI GCAGC 5 cut(s) 265, 580, 988, 1765, 2509
BccI CCATC 9 cut(s) 2, 268, 319, 788, 1067, 1963, 2072, 2533, 2611
BceAI ACGGC 3 cut(s) 188, 2622, 2646
BclI TGATCA 1 cut(s) 463
BcnI CCSGG 3 cut(s) 285, 1423, 1946
BcoDI GTCTC 7 cut(s) 116, 211, 258, 1340, 1420, 1622, 2203
BcuI ACTAGT 1 cut(s) 1928
BfaI CTAG 5 cut(s) 228, 336, 1256, 1929, 2000
BfmI CTRYAG 1 cut(s) 2634
BfrI CTTAAG 1 cut(s) 1687
BfuAI ACCTGC 1 cut(s) 658
BisI GCNGC 7 cut(s) 279, 569, 1002, 1779, 2205, 2406, 2498
BlpI GCTNAGC 1 cut(s) 1865
BlsI GCNGC 7 cut(s) 280, 570, 1003, 1780, 2206, 2407, 2499
Bme1390I CCNGG 3 cut(s) 285, 1423, 1946
Bme18I GGWCC 4 cut(s) 1542, 2348, 2444, 2585
BmgT120I GGNCC 4 cut(s) 1542, 2348, 2444, 2585
BmrFI CCNGG 3 cut(s) 285, 1423, 1946
BmrI ACTGGG 1 cut(s) 58
BmsI GCATC 2 cut(s) 1234, 1510
BmuI ACTGGG 1 cut(s) 58
BoxI GACNNNNGTC 1 cut(s) 180
BpiI GAAGAC 4 cut(s) 38, 305, 1465, 2112
Bpu1102I GCTNAGC 1 cut(s) 1865
Bpu14I TTCGAA 2 cut(s) 96, 1993
BpuEI CTTGAG 1 cut(s) 2097
BpuMI CCSGG 3 cut(s) 285, 1423, 1946
Bsa29I ATCGAT 1 cut(s) 2528
BsaAI YACGTR 1 cut(s) 1453
BsaBI GATNNNNATC 3 cut(s) 292, 462, 499
BsaJI CCNNGG 4 cut(s) 319, 1944, 2213, 2337
BsaWI WCCGGW 4 cut(s) 472, 1444, 2364, 2446
Bsc4I CCNNNNNNNGG 5 cut(s) 228, 325, 1097, 2219, 2453
Bse118I RCCGGY 1 cut(s) 244
Bse1I ACTGG 4 cut(s) 53, 1667, 2246, 2350
Bse3DI GCAATG 1 cut(s) 2185
Bse8I GATNNNNATC 3 cut(s) 292, 462, 499
BseAI TCCGGA 1 cut(s) 1444
BseCI ATCGAT 1 cut(s) 2528
BseDI CCNNGG 4 cut(s) 319, 1944, 2213, 2337
BseGI GGATG 9 cut(s) 279, 330, 1348, 1418, 1525, 1678, 1973, 2303, 2622
BseJI GATNNNNATC 3 cut(s) 292, 462, 499
BseLI CCNNNNNNNGG 5 cut(s) 228, 325, 1097, 2219, 2453
BseMI GCAATG 1 cut(s) 2185
BseMII CTCAG 4 cut(s) 288, 1565, 1856, 2214
BseNI ACTGG 4 cut(s) 53, 1667, 2246, 2350
BseRI GAGGAG 3 cut(s) 863, 1011, 1281
BseSI GKGCMC 1 cut(s) 1810
BseXI GCAGC 5 cut(s) 265, 580, 988, 1765, 2509
BseYI CCCAGC 1 cut(s) 2452
Bsh1236I CGCG 4 cut(s) 375, 681, 731, 1050
Bsh1285I CGRYCG 2 cut(s) 2477, 2692
BshVI ATCGAT 1 cut(s) 2528
BsiEI CGRYCG 2 cut(s) 2477, 2692
BsiHKAI GWGCWC 1 cut(s) 1810
BsiSI CCGG 8 cut(s) 245, 284, 473, 1422, 1445, 1946, 2365, 2447
BsiWI CGTACG 1 cut(s) 239
BslFI GGGAC 1 cut(s) 342
BslI CCNNNNNNNGG 5 cut(s) 228, 325, 1097, 2219, 2453
BsmAI GTCTC 7 cut(s) 116, 211, 258, 1340, 1420, 1622, 2203
BsmBI CGTCTC 3 cut(s) 116, 211, 1420
BsmFI GGGAC 1 cut(s) 342
BsmI GAATGC 2 cut(s) 721, 2500
Bsp119I TTCGAA 2 cut(s) 96, 1993
Bsp1286I GDGCHC 1 cut(s) 1810
Bsp13I TCCGGA 1 cut(s) 1444
Bsp1720I GCTNAGC 1 cut(s) 1865
Bsp19I CCATGG 1 cut(s) 319
BspCNI CTCAG 4 cut(s) 289, 1564, 1857, 2213
BspDI ATCGAT 1 cut(s) 2528
BspEI TCCGGA 1 cut(s) 1444
BspFNI CGCG 4 cut(s) 375, 681, 731, 1050
BspHI TCATGA 5 cut(s) 103, 439, 460, 1207, 1762
BspMI ACCTGC 1 cut(s) 658
BspPI GGATC 6 cut(s) 30, 295, 948, 1423, 1539, 2644
BspT104I TTCGAA 2 cut(s) 96, 1993
BspTI CTTAAG 1 cut(s) 1687
BsrBI CCGCTC 2 cut(s) 1263, 1271
BsrDI GCAATG 1 cut(s) 2185
BsrFI RCCGGY 1 cut(s) 244
BsrI ACTGG 4 cut(s) 53, 1667, 2246, 2350
BssAI RCCGGY 1 cut(s) 244
BssECI CCNNGG 4 cut(s) 319, 1944, 2213, 2337
BssT1I CCWWGG 2 cut(s) 319, 2213
Bst6I CTCTTC 7 cut(s) 121, 214, 537, 988, 1372, 2430, 2494
BstAFI CTTAAG 1 cut(s) 1687
BstBAI YACGTR 1 cut(s) 1453
BstBI TTCGAA 2 cut(s) 96, 1993
BstC8I GCNNGC 5 cut(s) 246, 483, 1261, 1783, 2297
BstDEI CTNAG 6 cut(s) 297, 812, 1551, 1865, 2200, 2397
BstDSI CCRYGG 1 cut(s) 319
BstEII GGTNACC 1 cut(s) 2382
BstF5I GGATG 9 cut(s) 279, 330, 1348, 1418, 1525, 1678, 1973, 2303, 2622
BstFNI CGCG 4 cut(s) 375, 681, 731, 1050
BstHHI GCGC 4 cut(s) 391, 681, 731, 2280
BstMAI GTCTC 7 cut(s) 116, 211, 258, 1340, 1420, 1622, 2203
BstMCI CGRYCG 2 cut(s) 2477, 2692
BstMWI GCNNNNNNNGC 2 cut(s) 1077, 2587
BstNSI RCATGY 5 cut(s) 1460, 1617, 1653, 1742, 2049
BstPAI GACNNNNGTC 1 cut(s) 180
BstPI GGTNACC 1 cut(s) 2382
BstSCI CCNGG 3 cut(s) 283, 1421, 1944
BstSFI CTRYAG 1 cut(s) 2634
BstSLI GKGCMC 1 cut(s) 1810
BstSNI TACGTA 1 cut(s) 1453
BstUI CGCG 4 cut(s) 375, 681, 731, 1050
BstV1I GCAGC 5 cut(s) 265, 580, 988, 1765, 2509
BstV2I GAAGAC 4 cut(s) 38, 305, 1465, 2112
BstX2I RGATCY 4 cut(s) 287, 940, 1531, 2649
BstXI CCANNNNNNTGG 1 cut(s) 2610
BstYI RGATCY 4 cut(s) 287, 940, 1531, 2649
Bsu15I ATCGAT 1 cut(s) 2528
BsuTUI ATCGAT 1 cut(s) 2528
BtgI CCRYGG 1 cut(s) 319
BtgZI GCGATG 2 cut(s) 263, 1086
BtsCI GGATG 9 cut(s) 279, 330, 1348, 1418, 1525, 1678, 1973, 2303, 2622
BtsI GCAGTG 1 cut(s) 2467
BtsIMutI CAGTG 4 cut(s) 1080, 1674, 2467, 2578
BveI ACCTGC 1 cut(s) 658
Cac8I GCNNGC 5 cut(s) 246, 483, 1261, 1783, 2297
CaiI CAGNNNCTG 1 cut(s) 2207
CciI TCATGA 5 cut(s) 103, 439, 460, 1207, 1762
CfoI GCGC 4 cut(s) 391, 681, 731, 2280
Cfr10I RCCGGY 1 cut(s) 244
Cfr13I GGNCC 4 cut(s) 1542, 2348, 2444, 2585
ClaI ATCGAT 1 cut(s) 2528
CseI GACGC 3 cut(s) 290, 560, 1712
Csp6I GTAC 3 cut(s) 240, 625, 1454
CviQI GTAC 3 cut(s) 240, 625, 1454
DdeI CTNAG 6 cut(s) 297, 812, 1551, 1865, 2200, 2397
DraIII CACNNNGTG 1 cut(s) 1361
DrdI GACNNNNNNGTC 1 cut(s) 1583
DseDI GACNNNNNNGTC 1 cut(s) 1583
Eam1104I CTCTTC 7 cut(s) 121, 214, 537, 988, 1372, 2430, 2494
EarI CTCTTC 7 cut(s) 121, 214, 537, 988, 1372, 2430, 2494
Eco105I TACGTA 1 cut(s) 1453
Eco130I CCWWGG 2 cut(s) 319, 2213
Eco47I GGWCC 4 cut(s) 1542, 2348, 2444, 2585
Eco57I CTGAAG 3 cut(s) 183, 1980, 2031
Eco91I GGTNACC 1 cut(s) 2382
EcoO65I GGTNACC 1 cut(s) 2382
EcoT14I CCWWGG 2 cut(s) 319, 2213
ErhI CCWWGG 2 cut(s) 319, 2213
Esp3I CGTCTC 3 cut(s) 116, 211, 1420
FalI AAGNNNNNCTT 6 cut(s) 2120, 2152, 2284, 2316, 2536, 2568
FaqI GGGAC 1 cut(s) 342
FauNDI CATATG 1 cut(s) 1185
FbaI TGATCA 1 cut(s) 463
FblI GTMKAC 1 cut(s) 184
Fnu4HI GCNGC 7 cut(s) 279, 569, 1002, 1779, 2205, 2406, 2498
FokI GGATG 9 cut(s) 286, 337, 1335, 1405, 1532, 1685, 1960, 2290, 2629
Fsp4HI GCNGC 7 cut(s) 279, 569, 1002, 1779, 2205, 2406, 2498
FspBI CTAG 5 cut(s) 228, 336, 1256, 1929, 2000
GlaI GCGC 4 cut(s) 390, 680, 730, 2279
GluI GCNGC 7 cut(s) 279, 569, 1002, 1779, 2205, 2406, 2498
GsaI CCCAGC 1 cut(s) 2456
HapII CCGG 8 cut(s) 245, 284, 473, 1422, 1445, 1946, 2365, 2447
HgaI GACGC 3 cut(s) 290, 560, 1712
HhaI GCGC 4 cut(s) 391, 681, 731, 2280
Hin6I GCGC 4 cut(s) 389, 679, 729, 2278
HinP1I GCGC 4 cut(s) 389, 679, 729, 2278
HincII GTYRAC 2 cut(s) 185, 699
HindII GTYRAC 2 cut(s) 185, 699
HindIII AAGCTT 1 cut(s) 672
HpaII CCGG 8 cut(s) 245, 284, 473, 1422, 1445, 1946, 2365, 2447
HphI GGTGA 9 cut(s) 419, 867, 1147, 1960, 2132, 2246, 2310, 2632, 2657
Hpy166II GTNNAC 8 cut(s) 185, 699, 1046, 1310, 1697, 1808, 2119, 2675
Hpy8I GTNNAC 8 cut(s) 185, 699, 1046, 1310, 1697, 1808, 2119, 2675
Hpy99I CGWCG 5 cut(s) 179, 306, 309, 312, 375
HpyAV CCTTC 4 cut(s) 47, 1322, 1362, 2310
HpyCH4IV ACGT 2 cut(s) 584, 1452
HpyCH4V TGCA 4 cut(s) 823, 1004, 1808, 2190
HpyF10VI GCNNNNNNNGC 2 cut(s) 1077, 2587
HpyF3I CTNAG 6 cut(s) 297, 812, 1551, 1865, 2200, 2397
HpySE526I ACGT 2 cut(s) 584, 1452
HspAI GCGC 4 cut(s) 389, 679, 729, 2278
Kpn2I TCCGGA 1 cut(s) 1444
KroI GCCGGC 1 cut(s) 244
KroNI GCCGGC 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 463
LmnI GCTCC 6 cut(s) 286, 998, 1268, 1722, 2449, 2494
Lsp1109I GCAGC 5 cut(s) 265, 580, 988, 1765, 2509
LweI GCATC 2 cut(s) 1234, 1510
MaeI CTAG 5 cut(s) 228, 336, 1256, 1929, 2000
MaeII ACGT 2 cut(s) 584, 1452
MaeIII GTNAC 8 cut(s) 401, 1361, 1645, 1771, 1818, 1969, 2382, 2626
MbiI CCGCTC 2 cut(s) 1263, 1271
MflI RGATCY 4 cut(s) 287, 940, 1531, 2649
MhlI GDGCHC 1 cut(s) 1810
MluCI AATT 7 cut(s) 17, 233, 836, 955, 1678, 1830, 2024
MluI ACGCGT 1 cut(s) 1048
MlyI GAGTC 6 cut(s) 180, 1287, 1358, 2102, 2425, 2474
MreI CGCCGGCG 1 cut(s) 244
MroI TCCGGA 1 cut(s) 1444
MroNI GCCGGC 1 cut(s) 244
MroXI GAANNNNTTC 3 cut(s) 586, 2016, 2181
MslI CAYNNNNRTG 6 cut(s) 465, 1113, 1212, 1286, 1518, 2223
MspA1I CMGCKG 2 cut(s) 1979, 2207
MspCI CTTAAG 1 cut(s) 1687
MspI CCGG 8 cut(s) 245, 284, 473, 1422, 1445, 1946, 2365, 2447
MspR9I CCNGG 3 cut(s) 285, 1423, 1946
Mva1269I GAATGC 2 cut(s) 721, 2500
MvnI CGCG 4 cut(s) 375, 681, 731, 1050
MwoI GCNNNNNNNGC 2 cut(s) 1077, 2587
NaeI GCCGGC 1 cut(s) 246
NciI CCSGG 3 cut(s) 285, 1423, 1946
NcoI CCATGG 1 cut(s) 319
NdeI CATATG 1 cut(s) 1185
NgoMIV GCCGGC 1 cut(s) 244
NmeAIII GCCGAG 1 cut(s) 2318
NmuCI GTSAC 5 cut(s) 1361, 1645, 1818, 1969, 2626
NspI RCATGY 5 cut(s) 1460, 1617, 1653, 1742, 2049
NspV TTCGAA 2 cut(s) 96, 1993
PagI TCATGA 5 cut(s) 103, 439, 460, 1207, 1762
PaqCI CACCTGC 1 cut(s) 658
PciI ACATGT 5 cut(s) 1456, 1613, 1649, 1738, 2045
PcsI WCGNNNNNNNCGW 2 cut(s) 710, 2474
PctI GAATGC 2 cut(s) 721, 2500
PdiI GCCGGC 1 cut(s) 246
PdmI GAANNNNTTC 3 cut(s) 586, 2016, 2181
Pfl23II CGTACG 1 cut(s) 239
PflMI CCANNNNNTGG 1 cut(s) 325
PfoI TCCNGGA 2 cut(s) 283, 1421
PkrI GCNGC 7 cut(s) 280, 570, 1003, 1780, 2206, 2407, 2499
PleI GAGTC 6 cut(s) 180, 1286, 1358, 2102, 2424, 2473
PpsI GAGTC 6 cut(s) 180, 1286, 1358, 2102, 2424, 2473
Ppu21I YACGTR 1 cut(s) 1453
PscI ACATGT 5 cut(s) 1456, 1613, 1649, 1738, 2045
PshAI GACNNNNGTC 1 cut(s) 180
PspEI GGTNACC 1 cut(s) 2382
PspFI CCCAGC 1 cut(s) 2452
PspLI CGTACG 1 cut(s) 239
PspPI GGNCC 4 cut(s) 1542, 2348, 2444, 2585
PsrI GAACNNNNNNTAC 2 cut(s) 574, 606
PstNI CAGNNNCTG 1 cut(s) 2207
PsuI RGATCY 4 cut(s) 287, 940, 1531, 2649
RsaI GTAC 3 cut(s) 241, 626, 1455
RsaNI GTAC 3 cut(s) 240, 625, 1454
RseI CAYNNNNRTG 6 cut(s) 465, 1113, 1212, 1286, 1518, 2223
SalI GTCGAC 1 cut(s) 183
SatI GCNGC 7 cut(s) 279, 569, 1002, 1779, 2205, 2406, 2498
Sau96I GGNCC 4 cut(s) 1542, 2348, 2444, 2585
SchI GAGTC 6 cut(s) 180, 1287, 1358, 2102, 2425, 2474
ScrFI CCNGG 3 cut(s) 285, 1423, 1946
SduI GDGCHC 1 cut(s) 1810
SfaNI GCATC 2 cut(s) 1234, 1510
SfcI CTRYAG 1 cut(s) 2634
SfuI TTCGAA 2 cut(s) 96, 1993
SgrAI CRCCGGYG 1 cut(s) 244
SinI GGWCC 4 cut(s) 1542, 2348, 2444, 2585
SmiMI CAYNNNNRTG 6 cut(s) 465, 1113, 1212, 1286, 1518, 2223
SmlI CTYRAG 2 cut(s) 1687, 2112
SmoI CTYRAG 2 cut(s) 1687, 2112
SnaBI TACGTA 1 cut(s) 1453
SpeI ACTAGT 1 cut(s) 1928
Sse9I AATT 7 cut(s) 17, 233, 836, 955, 1678, 1830, 2024
SspMI CTAG 5 cut(s) 228, 336, 1256, 1929, 2000
StyD4I CCNGG 3 cut(s) 283, 1421, 1944
StyI CCWWGG 2 cut(s) 319, 2213
TaiI ACGT 2 cut(s) 587, 1455
TaqII GACCGA 2 cut(s) 2463, 2678
TasI AATT 7 cut(s) 17, 233, 836, 955, 1678, 1830, 2024
TauI GCSGC 2 cut(s) 2207, 2408
TscAI CASTG 4 cut(s) 1087, 1674, 2467, 2578
TseFI GTSAC 5 cut(s) 1361, 1645, 1818, 1969, 2626
TseI GCWGC 5 cut(s) 278, 568, 1001, 1778, 2497
Tsp45I GTSAC 5 cut(s) 1361, 1645, 1818, 1969, 2626
TspGWI ACGGA 1 cut(s) 2002
TspRI CASTG 4 cut(s) 1087, 1674, 2467, 2578
Van91I CCANNNNNTGG 1 cut(s) 325
Vha464I CTTAAG 1 cut(s) 1687
VneI GTGCAC 1 cut(s) 1806
VpaK11BI GGWCC 4 cut(s) 1542, 2348, 2444, 2585
XapI RAATTY 3 cut(s) 233, 1830, 2024
XceI RCATGY 5 cut(s) 1460, 1617, 1653, 1742, 2049
XmiI GTMKAC 1 cut(s) 184
XmnI GAANNNNTTC 3 cut(s) 586, 2016, 2181
XspI CTAG 5 cut(s) 228, 336, 1256, 1929, 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.