WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37670 AT2G37670 AT5G02430 |
| fragaria_vesca | FvH4_6g13960 |
| malus_domestica | MD04G1127300.v1.1 MD12G1140500.v1.1 |
| prunus_persica | Prupe.6G253900_v2.0.a1 Prupe.6G253900_v2.0.a1 |
| pyrus_communis | pycom04g11410 |
| rosa_chinensis | RchiOBHm_Chr3g0466781 |
| rosa_laevigata | RLG00000024553 |
| rosa_multiflora | Rmu_sc0008017.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00414170 |
| rosa_rugosa | Rorug03G0083800 |
| rosa_samantha | Rh3AG131000 Rh3BG152000 Rh3CG151900 Rh3DG152700 |
| rosa_wichuraiana | Rw3G012380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 286 |
| AatII | GACGTC | 1 cut(s) | 1271 |
| AbsI | CCTCGAGG | 1 cut(s) | 119 |
| Acc36I | ACCTGC | 1 cut(s) | 2629 |
| AccB1I | GGYRCC | 2 cut(s) | 331, 2411 |
| AccBSI | CCGCTC | 1 cut(s) | 13 |
| AccI | GTMKAC | 1 cut(s) | 645 |
| AccII | CGCG | 2 cut(s) | 1400, 1418 |
| AclI | AACGTT | 1 cut(s) | 1041 |
| AclWI | GGATC | 7 cut(s) | 1158, 1171, 1434, 2619, 2645, 2652, 2690 |
| AcoI | YGGCCR | 1 cut(s) | 384 |
| AcsI | RAATTY | 7 cut(s) | 1084, 1350, 1385, 1483, 2356, 2661, 2902 |
| AcuI | CTGAAG | 2 cut(s) | 603, 2490 |
| AcyI | GRCGYC | 6 cut(s) | 236, 251, 287, 332, 468, 1268 |
| AfaI | GTAC | 5 cut(s) | 746, 917, 1632, 2021, 2182 |
| AflIII | ACRYGT | 2 cut(s) | 508, 1633 |
| AgeI | ACCGGT | 2 cut(s) | 939, 1906 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 738, 1249 |
| AjiI | CACGTC | 1 cut(s) | 2766 |
| AjnI | CCWGG | 3 cut(s) | 1977, 2666, 2789 |
| Alw26I | GTCTC | 7 cut(s) | 45, 100, 187, 572, 1775, 2392, 2548 |
| AlwI | GGATC | 7 cut(s) | 1158, 1171, 1434, 2619, 2645, 2652, 2690 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 896, 1735, 2441 |
| Ama87I | CYCGRG | 3 cut(s) | 119, 2323, 2639 |
| AoxI | GGCC | 7 cut(s) | 43, 123, 384, 786, 1975, 2405, 2944 |
| ApeKI | GCWGC | 5 cut(s) | 1553, 2223, 2446, 2537, 2635 |
| ApoI | RAATTY | 7 cut(s) | 1084, 1350, 1385, 1483, 2356, 2661, 2902 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 59, 91, 1258, 1290 |
| AsiGI | ACCGGT | 2 cut(s) | 939, 1906 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 941 |
| AspA2I | CCTAGG | 1 cut(s) | 2915 |
| AspLEI | GCGC | 4 cut(s) | 334, 441, 1418, 2273 |
| AspS9I | GGNCC | 9 cut(s) | 190, 486, 615, 786, 1243, 1719, 2406, 2787, 2945 |
| AsuHPI | GGTGA | 6 cut(s) | 400, 1027, 1036, 2137, 2744, 2894 |
| AsuII | TTCGAA | 2 cut(s) | 845, 2167 |
| AvaI | CYCGRG | 3 cut(s) | 119, 2323, 2639 |
| AvaII | GGWCC | 6 cut(s) | 190, 486, 615, 1243, 1719, 2787 |
| AvrII | CCTAGG | 1 cut(s) | 2915 |
| BaeGI | GKGCMC | 2 cut(s) | 1566, 1641 |
| BamHI | GGATCC | 1 cut(s) | 1163 |
| BanI | GGYRCC | 2 cut(s) | 331, 2411 |
| BanII | GRGCYC | 3 cut(s) | 341, 727, 2316 |
| BauI | CACGAG | 1 cut(s) | 697 |
| BbsI | GAAGAC | 5 cut(s) | 66, 1039, 1266, 2538, 2769 |
| BbvI | GCAGC | 5 cut(s) | 1540, 2235, 2458, 2549, 2622 |
| BccI | CCATC | 8 cut(s) | 319, 350, 1153, 1472, 1625, 1967, 2137, 2171 |
| BceAI | ACGGC | 5 cut(s) | 58, 89, 481, 707, 1154 |
| BciT130I | CCWGG | 3 cut(s) | 1979, 2668, 2791 |
| BciVI | GTATCC | 2 cut(s) | 880, 995 |
| BclI | TGATCA | 2 cut(s) | 873, 1546 |
| BcoDI | GTCTC | 7 cut(s) | 45, 100, 187, 572, 1775, 2392, 2548 |
| BfaI | CTAG | 2 cut(s) | 1602, 2916 |
| BfoI | RGCGCY | 2 cut(s) | 335, 442 |
| BfuAI | ACCTGC | 1 cut(s) | 2629 |
| BfuI | GTATCC | 2 cut(s) | 880, 995 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 794 |
| BlnI | CCTAGG | 1 cut(s) | 2915 |
| BlpI | GCTNAGC | 1 cut(s) | 528 |
| Bme18I | GGWCC | 6 cut(s) | 190, 486, 615, 1243, 1719, 2787 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 738, 1249 |
| BmeT110I | CYCGRG | 3 cut(s) | 119, 2323, 2639 |
| BmgBI | CACGTC | 1 cut(s) | 2766 |
| BmgT120I | GGNCC | 9 cut(s) | 190, 486, 615, 786, 1243, 1719, 2406, 2787, 2945 |
| BmrI | ACTGGG | 2 cut(s) | 46, 2429 |
| BmsI | GCATC | 6 cut(s) | 1687, 1870, 2525, 2593, 2768, 2913 |
| BmuI | ACTGGG | 2 cut(s) | 46, 2429 |
| BoxI | GACNNNNGTC | 1 cut(s) | 156 |
| BpiI | GAAGAC | 5 cut(s) | 66, 1039, 1266, 2538, 2769 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 113, 145, 751, 783 |
| BpmI | CTGGAG | 3 cut(s) | 596, 938, 1953 |
| Bpu10I | CCTNAGC | 1 cut(s) | 564 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 528 |
| Bpu14I | TTCGAA | 2 cut(s) | 845, 2167 |
| BpuEI | CTTGAG | 2 cut(s) | 2511, 2566 |
| Bsa29I | ATCGAT | 1 cut(s) | 1528 |
| BsaAI | YACGTR | 1 cut(s) | 511 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2649 |
| BsaHI | GRCGYC | 6 cut(s) | 236, 251, 287, 332, 468, 1268 |
| BsaI | GGTCTC | 1 cut(s) | 1775 |
| BsaWI | WCCGGW | 2 cut(s) | 939, 1906 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 80, 110 |
| Bse118I | RCCGGY | 2 cut(s) | 939, 1906 |
| Bse1I | ACTGG | 6 cut(s) | 41, 1931, 2110, 2274, 2374, 2435 |
| Bse3DI | GCAATG | 1 cut(s) | 1331 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2649 |
| BseBI | CCWGG | 3 cut(s) | 1979, 2668, 2791 |
| BseCI | ATCGAT | 1 cut(s) | 1528 |
| BseGI | GGATG | 8 cut(s) | 330, 1164, 1483, 1617, 1702, 1855, 2182, 2759 |
| BseJI | GATNNNNATC | 1 cut(s) | 2649 |
| BseMI | GCAATG | 1 cut(s) | 1331 |
| BseMII | CTCAG | 6 cut(s) | 296, 542, 555, 888, 1097, 2403 |
| BseNI | ACTGG | 6 cut(s) | 41, 1931, 2110, 2274, 2374, 2435 |
| BseRI | GAGGAG | 6 cut(s) | 88, 118, 121, 175, 677, 1504 |
| BseSI | GKGCMC | 2 cut(s) | 1566, 1641 |
| BseXI | GCAGC | 5 cut(s) | 1540, 2235, 2458, 2549, 2622 |
| BsgI | GTGCAG | 2 cut(s) | 1539, 2465 |
| Bsh1236I | CGCG | 2 cut(s) | 1400, 1418 |
| Bsh1285I | CGRYCG | 3 cut(s) | 70, 91, 611 |
| BshFI | GGCC | 7 cut(s) | 45, 125, 386, 788, 1977, 2407, 2946 |
| BshNI | GGYRCC | 2 cut(s) | 331, 2411 |
| BshTI | ACCGGT | 2 cut(s) | 939, 1906 |
| BshVI | ATCGAT | 1 cut(s) | 1528 |
| BsiEI | CGRYCG | 3 cut(s) | 70, 91, 611 |
| BsiHKCI | CYCGRG | 3 cut(s) | 119, 2323, 2639 |
| BslFI | GGGAC | 3 cut(s) | 53, 212, 464 |
| BsmAI | GTCTC | 7 cut(s) | 45, 100, 187, 572, 1775, 2392, 2548 |
| BsmBI | CGTCTC | 2 cut(s) | 45, 187 |
| BsmFI | GGGAC | 3 cut(s) | 53, 212, 464 |
| BsmI | GAATGC | 1 cut(s) | 2449 |
| BsnI | GGCC | 7 cut(s) | 45, 125, 386, 788, 1977, 2407, 2946 |
| Bso31I | GGTCTC | 1 cut(s) | 1775 |
| BsoBI | CYCGRG | 3 cut(s) | 119, 2323, 2639 |
| Bsp119I | TTCGAA | 2 cut(s) | 845, 2167 |
| Bsp1286I | GDGCHC | 5 cut(s) | 341, 727, 1566, 1641, 2316 |
| Bsp1407I | TGTACA | 2 cut(s) | 1630, 2019 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 528 |
| Bsp19I | CCATGG | 2 cut(s) | 6, 2402 |
| BspANI | GGCC | 7 cut(s) | 45, 125, 386, 788, 1977, 2407, 2946 |
| BspCNI | CTCAG | 6 cut(s) | 295, 541, 556, 889, 1098, 2402 |
| BspDI | ATCGAT | 1 cut(s) | 1528 |
| BspFNI | CGCG | 2 cut(s) | 1400, 1418 |
| BspHI | TCATGA | 3 cut(s) | 1360, 1939, 2362 |
| BspMI | ACCTGC | 1 cut(s) | 2629 |
| BspPI | GGATC | 7 cut(s) | 1158, 1171, 1434, 2619, 2645, 2652, 2690 |
| BspQI | GCTCTTC | 1 cut(s) | 2304 |
| BspT104I | TTCGAA | 2 cut(s) | 845, 2167 |
| BspT107I | GGYRCC | 2 cut(s) | 331, 2411 |
| BspTNI | GGTCTC | 1 cut(s) | 1775 |
| BsrBI | CCGCTC | 1 cut(s) | 13 |
| BsrDI | GCAATG | 1 cut(s) | 1331 |
| BsrFI | RCCGGY | 2 cut(s) | 939, 1906 |
| BsrGI | TGTACA | 2 cut(s) | 1630, 2019 |
| BsrI | ACTGG | 6 cut(s) | 41, 1931, 2110, 2274, 2374, 2435 |
| BssAI | RCCGGY | 2 cut(s) | 939, 1906 |
| BssNI | GRCGYC | 6 cut(s) | 236, 251, 287, 332, 468, 1268 |
| BssSI | CACGAG | 1 cut(s) | 697 |
| BssT1I | CCWWGG | 3 cut(s) | 6, 2402, 2915 |
| Bst2BI | CACGAG | 1 cut(s) | 697 |
| Bst2UI | CCWGG | 3 cut(s) | 1979, 2668, 2791 |
| Bst4CI | ACNGT | 8 cut(s) | 92, 158, 363, 423, 1648, 1762, 1836, 2012 |
| Bst6I | CTCTTC | 3 cut(s) | 1117, 2304, 2574 |
| BstACI | GRCGYC | 6 cut(s) | 236, 251, 287, 332, 468, 1268 |
| BstAUI | TGTACA | 2 cut(s) | 1630, 2019 |
| BstBAI | YACGTR | 1 cut(s) | 511 |
| BstBI | TTCGAA | 2 cut(s) | 845, 2167 |
| BstC8I | GCNNGC | 5 cut(s) | 727, 1414, 1984, 2542, 2838 |
| BstDEI | CTNAG | 8 cut(s) | 282, 528, 564, 897, 1106, 2389, 2454, 2574 |
| BstDSI | CCRYGG | 3 cut(s) | 6, 291, 2402 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2716 |
| BstF5I | GGATG | 8 cut(s) | 330, 1164, 1483, 1617, 1702, 1855, 2182, 2759 |
| BstFNI | CGCG | 2 cut(s) | 1400, 1418 |
| BstH2I | RGCGCY | 2 cut(s) | 335, 442 |
| BstHHI | GCGC | 4 cut(s) | 334, 441, 1418, 2273 |
| BstMAI | GTCTC | 7 cut(s) | 45, 100, 187, 572, 1775, 2392, 2548 |
| BstMCI | CGRYCG | 3 cut(s) | 70, 91, 611 |
| BstNI | CCWGG | 3 cut(s) | 1979, 2668, 2791 |
| BstNSI | RCATGY | 2 cut(s) | 1637, 2020 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 156 |
| BstSLI | GKGCMC | 2 cut(s) | 1566, 1641 |
| BstUI | CGCG | 2 cut(s) | 1400, 1418 |
| BstV1I | GCAGC | 5 cut(s) | 1540, 2235, 2458, 2549, 2622 |
| BstV2I | GAAGAC | 5 cut(s) | 66, 1039, 1266, 2538, 2769 |
| BstX2I | RGATCY | 2 cut(s) | 1163, 2650 |
| BstYI | RGATCY | 2 cut(s) | 1163, 2650 |
| Bsu15I | ATCGAT | 1 cut(s) | 1528 |
| BsuI | GTATCC | 2 cut(s) | 880, 995 |
| BsuRI | GGCC | 7 cut(s) | 45, 125, 386, 788, 1977, 2407, 2946 |
| BsuTUI | ATCGAT | 1 cut(s) | 1528 |
| BtgI | CCRYGG | 3 cut(s) | 6, 291, 2402 |
| BtgZI | GCGATG | 2 cut(s) | 290, 1148 |
| BtrI | CACGTC | 1 cut(s) | 2766 |
| BtsCI | GGATG | 8 cut(s) | 330, 1164, 1483, 1617, 1702, 1855, 2182, 2759 |
| BtsI | GCAGTG | 2 cut(s) | 1950, 2761 |
| BtsIMutI | CAGTG | 6 cut(s) | 345, 952, 1950, 2281, 2381, 2761 |
| BveI | ACCTGC | 1 cut(s) | 2629 |
| Cac8I | GCNNGC | 5 cut(s) | 727, 1414, 1984, 2542, 2838 |
| CaiI | CAGNNNCTG | 3 cut(s) | 896, 1735, 2441 |
| CciI | TCATGA | 3 cut(s) | 1360, 1939, 2362 |
| CfoI | GCGC | 4 cut(s) | 334, 441, 1418, 2273 |
| Cfr10I | RCCGGY | 2 cut(s) | 939, 1906 |
| Cfr13I | GGNCC | 9 cut(s) | 190, 486, 615, 786, 1243, 1719, 2406, 2787, 2945 |
| ClaI | ATCGAT | 1 cut(s) | 1528 |
| CpoI | CGGWCCG | 2 cut(s) | 190, 486 |
| CseI | GACGC | 7 cut(s) | 169, 244, 259, 276, 457, 1406, 2543 |
| Csp6I | GTAC | 5 cut(s) | 745, 916, 1631, 2020, 2181 |
| CspAI | ACCGGT | 2 cut(s) | 939, 1906 |
| CspI | CGGWCCG | 2 cut(s) | 190, 486 |
| CviQI | GTAC | 5 cut(s) | 745, 916, 1631, 2020, 2181 |
| DdeI | CTNAG | 8 cut(s) | 282, 528, 564, 897, 1106, 2389, 2454, 2574 |
| DinI | GGCGCC | 1 cut(s) | 333 |
| DraI | TTTAAA | 1 cut(s) | 1797 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 286 |
| DriI | GACNNNNNGTC | 2 cut(s) | 738, 1249 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 286 |
| EaeI | YGGCCR | 1 cut(s) | 384 |
| Eam1104I | CTCTTC | 3 cut(s) | 1117, 2304, 2574 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 738, 1249 |
| EarI | CTCTTC | 3 cut(s) | 1117, 2304, 2574 |
| EciI | GGCGGA | 3 cut(s) | 91, 840, 1156 |
| Eco130I | CCWWGG | 3 cut(s) | 6, 2402, 2915 |
| Eco147I | AGGCCT | 1 cut(s) | 125 |
| Eco24I | GRGCYC | 3 cut(s) | 341, 727, 2316 |
| Eco31I | GGTCTC | 1 cut(s) | 1775 |
| Eco47I | GGWCC | 6 cut(s) | 190, 486, 615, 1243, 1719, 2787 |
| Eco57I | CTGAAG | 2 cut(s) | 603, 2490 |
| Eco88I | CYCGRG | 3 cut(s) | 119, 2323, 2639 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2716 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2945 |
| EcoRII | CCWGG | 3 cut(s) | 1977, 2666, 2789 |
| EcoT14I | CCWWGG | 3 cut(s) | 6, 2402, 2915 |
| EcoT22I | ATGCAT | 2 cut(s) | 2518, 2608 |
| EcoT38I | GRGCYC | 3 cut(s) | 341, 727, 2316 |
| EgeI | GGCGCC | 1 cut(s) | 333 |
| EheI | GGCGCC | 1 cut(s) | 333 |
| ErhI | CCWWGG | 3 cut(s) | 6, 2402, 2915 |
| Esp3I | CGTCTC | 2 cut(s) | 45, 187 |
| FaqI | GGGAC | 3 cut(s) | 53, 212, 464 |
| FauI | CCCGC | 4 cut(s) | 776, 1049, 1411, 2637 |
| FauNDI | CATATG | 1 cut(s) | 2267 |
| FbaI | TGATCA | 2 cut(s) | 873, 1546 |
| FblI | GTMKAC | 1 cut(s) | 645 |
| FokI | GGATG | 8 cut(s) | 337, 1171, 1490, 1604, 1709, 1862, 2189, 2746 |
| FriOI | GRGCYC | 3 cut(s) | 341, 727, 2316 |
| FspBI | CTAG | 2 cut(s) | 1602, 2916 |
| GlaI | GCGC | 4 cut(s) | 333, 440, 1417, 2272 |
| GsuI | CTGGAG | 3 cut(s) | 596, 938, 1953 |
| HaeII | RGCGCY | 2 cut(s) | 335, 442 |
| HaeIII | GGCC | 7 cut(s) | 45, 125, 386, 788, 1977, 2407, 2946 |
| HgaI | GACGC | 7 cut(s) | 169, 244, 259, 276, 457, 1406, 2543 |
| HhaI | GCGC | 4 cut(s) | 334, 441, 1418, 2273 |
| Hin1I | GRCGYC | 6 cut(s) | 236, 251, 287, 332, 468, 1268 |
| Hin6I | GCGC | 4 cut(s) | 332, 439, 1416, 2271 |
| HinP1I | GCGC | 4 cut(s) | 332, 439, 1416, 2271 |
| HincII | GTYRAC | 1 cut(s) | 910 |
| HindII | GTYRAC | 1 cut(s) | 910 |
| HindIII | AAGCTT | 1 cut(s) | 633 |
| HphI | GGTGA | 6 cut(s) | 400, 1027, 1036, 2137, 2744, 2894 |
| Hpy166II | GTNNAC | 5 cut(s) | 426, 646, 747, 910, 1924 |
| Hpy8I | GTNNAC | 5 cut(s) | 426, 646, 747, 910, 1924 |
| HpyCH4III | ACNGT | 8 cut(s) | 92, 158, 363, 423, 1648, 1762, 1836, 2012 |
| HpyCH4IV | ACGT | 4 cut(s) | 510, 1041, 1268, 2765 |
| HpyF3I | CTNAG | 8 cut(s) | 282, 528, 564, 897, 1106, 2389, 2454, 2574 |
| HpySE526I | ACGT | 4 cut(s) | 510, 1041, 1268, 2765 |
| Hsp92I | GRCGYC | 6 cut(s) | 236, 251, 287, 332, 468, 1268 |
| HspAI | GCGC | 4 cut(s) | 332, 439, 1416, 2271 |
| KasI | GGCGCC | 1 cut(s) | 331 |
| Ksp22I | TGATCA | 2 cut(s) | 873, 1546 |
| LguI | GCTCTTC | 1 cut(s) | 2304 |
| Lsp1109I | GCAGC | 5 cut(s) | 1540, 2235, 2458, 2549, 2622 |
| LweI | GCATC | 6 cut(s) | 1687, 1870, 2525, 2593, 2768, 2913 |
| MaeI | CTAG | 2 cut(s) | 1602, 2916 |
| MaeII | ACGT | 4 cut(s) | 510, 1041, 1268, 2765 |
| MaeIII | GTNAC | 8 cut(s) | 220, 366, 490, 1076, 1822, 1948, 2143, 2863 |
| MbiI | CCGCTC | 1 cut(s) | 13 |
| MfeI | CAATTG | 1 cut(s) | 968 |
| MflI | RGATCY | 2 cut(s) | 1163, 2650 |
| MhlI | GDGCHC | 5 cut(s) | 341, 727, 1566, 1641, 2316 |
| Mly113I | GGCGCC | 1 cut(s) | 332 |
| MlyI | GAGTC | 5 cut(s) | 89, 274, 387, 2185, 2699 |
| MmeI | TCCRAC | 3 cut(s) | 979, 1260, 1455 |
| Mph1103I | ATGCAT | 2 cut(s) | 2518, 2608 |
| MroXI | GAANNNNTTC | 1 cut(s) | 941 |
| MseI | TTAA | 5 cut(s) | 435, 1181, 1383, 1796, 2042 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1695, 2292 |
| MspA1I | CMGCKG | 2 cut(s) | 595, 2635 |
| MunI | CAATTG | 1 cut(s) | 968 |
| Mva1269I | GAATGC | 1 cut(s) | 2449 |
| MvaI | CCWGG | 3 cut(s) | 1979, 2668, 2791 |
| MvnI | CGCG | 2 cut(s) | 1400, 1418 |
| NarI | GGCGCC | 1 cut(s) | 332 |
| NcoI | CCATGG | 2 cut(s) | 6, 2402 |
| NdeI | CATATG | 1 cut(s) | 2267 |
| NmeAIII | GCCGAG | 1 cut(s) | 375 |
| NmuCI | GTSAC | 5 cut(s) | 220, 1822, 1948, 2143, 2863 |
| NsiI | ATGCAT | 2 cut(s) | 2518, 2608 |
| NspI | RCATGY | 2 cut(s) | 1637, 2020 |
| NspV | TTCGAA | 2 cut(s) | 845, 2167 |
| PaeR7I | CTCGAG | 2 cut(s) | 119, 2639 |
| PagI | TCATGA | 3 cut(s) | 1360, 1939, 2362 |
| PceI | AGGCCT | 1 cut(s) | 125 |
| PciI | ACATGT | 1 cut(s) | 1633 |
| PciSI | GCTCTTC | 1 cut(s) | 2304 |
| PcsI | WCGNNNNNNNCGW | 8 cut(s) | 60, 63, 84, 177, 842, 1047, 1229, 1274 |
| PctI | GAATGC | 1 cut(s) | 2449 |
| PdmI | GAANNNNTTC | 1 cut(s) | 941 |
| PfeI | GAWTC | 9 cut(s) | 752, 880, 1888, 2125, 2156, 2164, 2282, 2675, 2735 |
| PflFI | GACNNNGTC | 2 cut(s) | 92, 1270 |
| PfoI | TCCNGGA | 4 cut(s) | 1253, 1620, 2159, 2666 |
| PinAI | ACCGGT | 2 cut(s) | 939, 1906 |
| Ple19I | CGATCG | 1 cut(s) | 611 |
| PleI | GAGTC | 5 cut(s) | 88, 274, 387, 2185, 2698 |
| PluTI | GGCGCC | 1 cut(s) | 335 |
| PpsI | GAGTC | 5 cut(s) | 88, 274, 387, 2185, 2698 |
| Ppu21I | YACGTR | 1 cut(s) | 511 |
| PscI | ACATGT | 1 cut(s) | 1633 |
| PshAI | GACNNNNGTC | 1 cut(s) | 156 |
| Psp1406I | AACGTT | 1 cut(s) | 1041 |
| Psp6I | CCWGG | 3 cut(s) | 1977, 2666, 2789 |
| PspGI | CCWGG | 3 cut(s) | 1977, 2666, 2789 |
| PspPI | GGNCC | 9 cut(s) | 190, 486, 615, 786, 1243, 1719, 2406, 2787, 2945 |
| PspXI | VCTCGAGB | 2 cut(s) | 119, 2639 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2335, 2367 |
| PstNI | CAGNNNCTG | 3 cut(s) | 896, 1735, 2441 |
| PsuI | RGATCY | 2 cut(s) | 1163, 2650 |
| PsyI | GACNNNGTC | 2 cut(s) | 92, 1270 |
| PvuI | CGATCG | 1 cut(s) | 611 |
| RsaI | GTAC | 5 cut(s) | 746, 917, 1632, 2021, 2182 |
| RsaNI | GTAC | 5 cut(s) | 745, 916, 1631, 2020, 2181 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1695, 2292 |
| Rsr2I | CGGWCCG | 2 cut(s) | 190, 486 |
| RsrII | CGGWCCG | 2 cut(s) | 190, 486 |
| SapI | GCTCTTC | 1 cut(s) | 2304 |
| SaqAI | TTAA | 5 cut(s) | 435, 1181, 1383, 1796, 2042 |
| Sau96I | GGNCC | 9 cut(s) | 190, 486, 615, 786, 1243, 1719, 2406, 2787, 2945 |
| SchI | GAGTC | 5 cut(s) | 89, 274, 387, 2185, 2699 |
| SduI | GDGCHC | 5 cut(s) | 341, 727, 1566, 1641, 2316 |
| SfaNI | GCATC | 6 cut(s) | 1687, 1870, 2525, 2593, 2768, 2913 |
| SfoI | GGCGCC | 1 cut(s) | 333 |
| Sfr274I | CTCGAG | 2 cut(s) | 119, 2639 |
| SfuI | TTCGAA | 2 cut(s) | 845, 2167 |
| SinI | GGWCC | 6 cut(s) | 190, 486, 615, 1243, 1719, 2787 |
| SlaI | CTCGAG | 2 cut(s) | 119, 2639 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1695, 2292 |
| SmlI | CTYRAG | 4 cut(s) | 119, 2526, 2545, 2639 |
| SmoI | CTYRAG | 4 cut(s) | 119, 2526, 2545, 2639 |
| SseBI | AGGCCT | 1 cut(s) | 125 |
| SspDI | GGCGCC | 1 cut(s) | 331 |
| SspI | AATATT | 1 cut(s) | 2803 |
| SspMI | CTAG | 2 cut(s) | 1602, 2916 |
| StuI | AGGCCT | 1 cut(s) | 125 |
| StyI | CCWWGG | 3 cut(s) | 6, 2402, 2915 |
| TaaI | ACNGT | 8 cut(s) | 92, 158, 363, 423, 1648, 1762, 1836, 2012 |
| TaiI | ACGT | 4 cut(s) | 513, 1044, 1271, 2768 |
| TaqII | GACCGA | 1 cut(s) | 178 |
| TatI | WGTACW | 2 cut(s) | 1630, 2019 |
| TfiI | GAWTC | 9 cut(s) | 752, 880, 1888, 2125, 2156, 2164, 2282, 2675, 2735 |
| Tru1I | TTAA | 5 cut(s) | 435, 1181, 1383, 1796, 2042 |
| Tru9I | TTAA | 5 cut(s) | 435, 1181, 1383, 1796, 2042 |
| TscAI | CASTG | 6 cut(s) | 352, 952, 1957, 2281, 2381, 2761 |
| TseFI | GTSAC | 5 cut(s) | 220, 1822, 1948, 2143, 2863 |
| TseI | GCWGC | 5 cut(s) | 1553, 2223, 2446, 2537, 2635 |
| Tsp45I | GTSAC | 5 cut(s) | 220, 1822, 1948, 2143, 2863 |
| TspGWI | ACGGA | 8 cut(s) | 280, 405, 466, 478, 732, 745, 764, 1524 |
| TspRI | CASTG | 6 cut(s) | 352, 952, 1957, 2281, 2381, 2761 |
| Tth111I | GACNNNGTC | 2 cut(s) | 92, 1270 |
| VpaK11BI | GGWCC | 6 cut(s) | 190, 486, 615, 1243, 1719, 2787 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2716 |
| XapI | RAATTY | 7 cut(s) | 1084, 1350, 1385, 1483, 2356, 2661, 2902 |
| XceI | RCATGY | 2 cut(s) | 1637, 2020 |
| XhoI | CTCGAG | 2 cut(s) | 119, 2639 |
| XmaJI | CCTAGG | 1 cut(s) | 2915 |
| XmiI | GTMKAC | 1 cut(s) | 645 |
| XmnI | GAANNNNTTC | 1 cut(s) | 941 |
| XspI | CTAG | 2 cut(s) | 1602, 2916 |
| ZraI | GACGTC | 1 cut(s) | 1269 |
| Zsp2I | ATGCAT | 2 cut(s) | 2518, 2608 |