pycom04g11410

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0012301
Physical Location & Seq
Reverse (-)
14280908 .. 14282643
1736 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g11410.1

Sequence Viewer

Length: 1671 bp
ATGAAGATGGAGCGGAAAAAGACGTTGACGATGAACTGGGACGGCCTCCGGGACGACGATGACGACGACCGCTTTTTCGAGTCAAAGGAACGCGCCTCCTCCGTCGTTCCTCTCGACCTCGAGGCATCCTCCTCCGAAGATGAGGATTTCGACGGCAGTCGCAATTCATTCGCCTCATGTGTCTCCTCTGTTCGAAACGATGTCGATTTTCGCGCCTCCACCGCAGCCGCTCCGATGGAGCCACCGTCTACTTCCGCGGCTCCAATGACGCCGGATTACAACATCTGGATGGAGGCGCCCGGGTCTATCACTGAGCGGCGGAAACGATTATTGCAGGGCATGGGGTTAGCCCAAGGACCTGGAAAAGACCTCGTCAGCTTCAAACAACTAACCAGCATTAAACGCCTCGTTTCCAACAAACTCAAAAACGGCGTCGTTCCAATCCCCCAGTCAATCACTCGGGCCAAAGAAAAAGGACAAGTATCGTCGGATCAGCCGGTATCGGAGACAGAGCCAGAGTCGGAGCCGGAGCCTGATCATGATCCATTGCCGGTGGTGCTCGTCCGTTCGAGGTCGGAGGGCGACATTGAAGCTTTCTCGGTAGATAAACAAAGGAAGGAAGAGATAATCGGAACAATCTCGAAGCAACGGCTTACGAGGACTTGCTCCGCCATAGCCGCAACTCGCTCGAGAATATGTCCGTACACCGAATCGGTTAGAGCGTCCCCGAACGAAGTCGGAGACGCTACTCCCAAGAGCCGATCGGTTCGGACCGGCGGTGGATTGTCGTCGGTCTTCTCGAACAACCGGTTAGGAGACGGGTGCTGGAATCGACTCAGCGATCTCCAAACGGGGAAGCAATTGACGATGGACGAGTTCGAGAAATGTGTCGGGTACTCGCCAGTGGTGAAAGAGGTTATGCGAAGACAGAGCGTTTCCAGCGAAGGGAGCGGCGACGAAAGGAAGCTCGGTACAGGGGCGAATTCGTTTGTTTCGAAGAGCCTGAGGATGAGCAAGAGAAGAGGGGTTGCTCTGTTGAAGAACAGCATACGAGGCGTGGGGACCGCTGTGAGTGTGCTGATTGGGGACAAAGAGAGGGAAAACACGACGCCGCCGCTGACACCACCGCCGGAGCAGAAACCCGCCAAGAACTCGAGTTCTTCTTCGTCGGCTTCATCGGAATGGGTCAAAGTTAGGCAGACAGGGAAACATTACAAGGAGTTATCGGCATTACATTTGTGTCAAGAGATTCAAGCTCACGAGGGGTCAATTTGGGCTATTAAGTTTAGCTTAGATGCAAGGTTTCTTGCGAGTGCAGGAGAGGATCGGGTTATTCATGTGTGGGAAGTGCAAGAGTGTGAGATTATGTCATTGGATGGGAATTCGACCCCGCTTCATCACTCTCTCGGGTCCTCCACCCCTGATCGTTCGCCATCAATGTCTGATCAAGCTGCGGTTGGGCCATCCGAGAAGGAGAAGAAGAAGAAGGGAAAGGGTGGGTCTGCTAGAAAAAGCAATCCAATCCCAGAATATGTGCATGTGCCCGAAACAGTGTTTTCATTTTCTGAGAAACCATGTTGCTCTTTTGAAGGTCATTTGGATGCTGTTCTGGACCTGTCCTGGTCCAGAGATCAGGTCAGCTCCTTTCTAAATGTTCTTTTCTTCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

557

Amino Acids

60.95

Weight (kDa)

6.79

Isoelectric Point (pI)

52.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_THOC3 PF25174 408 - 454 4e-07 THOC3 beta-propeller domain
WD40 PF00400 414 - 448 2.3e-06 WD domain, G-beta repeat
Beta-prop_WDR5 PF25175 417 - 456 9.4e-06 WDR5 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012301)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37670 AT2G37670 AT5G02430
fragaria_vesca FvH4_6g13960
malus_domestica MD04G1127300.v1.1 MD12G1140500.v1.1
prunus_persica Prupe.6G253900_v2.0.a1 Prupe.6G253900_v2.0.a1
pyrus_communis pycom04g11410
rosa_chinensis RchiOBHm_Chr3g0466781
rosa_laevigata RLG00000024553
rosa_multiflora Rmu_sc0008017.1_g000009
rosa_roxburghii Rroxscaffold_6G00414170
rosa_rugosa Rorug03G0083800
rosa_samantha Rh3AG131000 Rh3BG152000 Rh3CG151900 Rh3DG152700
rosa_wichuraiana Rw3G012380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 119
AccB1I GGYRCC 1 cut(s) 295
AccBSI CCGCTC 4 cut(s) 13, 230, 316, 951
AccI GTMKAC 1 cut(s) 248
AccII CGCG 3 cut(s) 93, 213, 257
AclWI GGATC 3 cut(s) 498, 536, 1332
AcsI RAATTY 2 cut(s) 982, 1381
AcyI GRCGYC 4 cut(s) 269, 296, 432, 1109
AfaI GTAC 3 cut(s) 704, 896, 973
AfiI CCNNNNNNNGG 1 cut(s) 945
AgeI ACCGGT 1 cut(s) 807
AgsI TTSAA 6 cut(s) 382, 590, 1039, 1253, 1589, 1666
AjnI CCWGG 2 cut(s) 358, 1619
AluBI AGCT 7 cut(s) 378, 593, 967, 1256, 1290, 1451, 1641
AluI AGCT 7 cut(s) 378, 593, 967, 1256, 1290, 1451, 1641
Alw21I GWGCWC 1 cut(s) 561
Alw26I GTCTC 4 cut(s) 187, 500, 735, 810
AlwI GGATC 3 cut(s) 498, 536, 1332
Ama87I CYCGRG 6 cut(s) 119, 299, 459, 688, 1153, 1406
AoxI GGCC 3 cut(s) 43, 462, 1460
ApeKI GCWGC 2 cut(s) 224, 1451
ApoI RAATTY 2 cut(s) 982, 1381
ArsI GACNNNNNNTTYG 4 cut(s) 59, 91, 417, 449
AsiGI ACCGGT 1 cut(s) 807
AspLEI GCGC 3 cut(s) 95, 215, 298
AspS9I GGNCC 8 cut(s) 356, 462, 771, 1062, 1410, 1460, 1612, 1623
AsuC2I CCSGG 3 cut(s) 50, 300, 301
AsuHPI GGTGA 1 cut(s) 919
AsuII TTCGAA 2 cut(s) 193, 995
AvaI CYCGRG 6 cut(s) 119, 299, 459, 688, 1153, 1406
AvaII GGWCC 6 cut(s) 356, 771, 1062, 1410, 1612, 1623
AxyI CCTNAGG 1 cut(s) 1004
BaeGI GKGCMC 1 cut(s) 1545
BanI GGYRCC 1 cut(s) 295
BauI CACGAG 1 cut(s) 1259
BbsI GAAGAC 2 cut(s) 787, 931
Bbv12I GWGCWC 1 cut(s) 561
BbvI GCAGC 2 cut(s) 236, 1438
BccI CCATC 6 cut(s) 229, 283, 862, 1370, 1441, 1471
BceAI ACGGC 4 cut(s) 58, 169, 445, 665
BcgI CGANNNNNNTGC 4 cut(s) 151, 185, 669, 703
BciT130I CCWGG 2 cut(s) 360, 1621
BclI TGATCA 2 cut(s) 535, 1444
BcnI CCSGG 3 cut(s) 50, 300, 301
BcoDI GTCTC 4 cut(s) 187, 500, 735, 810
BfaI CTAG 1 cut(s) 1506
BfoI RGCGCY 1 cut(s) 299
BisI GCNGC 9 cut(s) 225, 228, 258, 317, 678, 952, 1112, 1115, 1452
BlsI GCNGC 9 cut(s) 226, 229, 259, 318, 679, 953, 1113, 1116, 1453
Bme1390I CCNGG 5 cut(s) 50, 300, 301, 360, 1621
Bme18I GGWCC 6 cut(s) 356, 771, 1062, 1410, 1612, 1623
BmeT110I CYCGRG 6 cut(s) 119, 299, 459, 688, 1153, 1406
BmgT120I GGNCC 8 cut(s) 356, 462, 771, 1062, 1410, 1460, 1612, 1623
BmiI GGNNCC 7 cut(s) 240, 261, 297, 525, 531, 1063, 1411
BmrFI CCNGG 5 cut(s) 50, 300, 301, 360, 1621
BmrI ACTGGG 2 cut(s) 46, 442
BmsI GCATC 3 cut(s) 134, 1285, 1591
BmuI ACTGGG 2 cut(s) 46, 442
BoxI GACNNNNGTC 1 cut(s) 156
BpiI GAAGAC 2 cut(s) 787, 931
BplI GAGNNNNNCTC 2 cut(s) 113, 145
Bpu14I TTCGAA 2 cut(s) 193, 995
BpuMI CCSGG 3 cut(s) 50, 300, 301
BsaBI GATNNNNATC 1 cut(s) 540
BsaHI GRCGYC 4 cut(s) 269, 296, 432, 1109
BsaJI CCNNGG 3 cut(s) 255, 299, 352
BsaWI WCCGGW 1 cut(s) 807
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 1 cut(s) 945
Bse118I RCCGGY 4 cut(s) 496, 550, 773, 807
Bse1I ACTGG 3 cut(s) 41, 448, 902
Bse21I CCTNAGG 1 cut(s) 1004
Bse3DI GCAATG 1 cut(s) 545
Bse8I GATNNNNATC 1 cut(s) 540
BseBI CCWGG 2 cut(s) 360, 1621
BseDI CCNNGG 3 cut(s) 255, 299, 352
BseGI GGATG 6 cut(s) 125, 294, 1014, 1381, 1463, 1606
BseJI GATNNNNATC 1 cut(s) 540
BseLI CCNNNNNNNGG 1 cut(s) 945
BseMI GCAATG 1 cut(s) 545
BseMII CTCAG 4 cut(s) 303, 850, 995, 1557
BseNI ACTGG 3 cut(s) 41, 448, 902
BseRI GAGGAG 3 cut(s) 88, 121, 175
BseSI GKGCMC 1 cut(s) 1545
BseXI GCAGC 2 cut(s) 236, 1438
BsgI GTGCAG 1 cut(s) 1335
Bsh1236I CGCG 3 cut(s) 93, 213, 257
Bsh1285I CGRYCG 2 cut(s) 70, 764
BshFI GGCC 3 cut(s) 45, 464, 1462
BshNI GGYRCC 1 cut(s) 295
BshTI ACCGGT 1 cut(s) 807
BsiEI CGRYCG 2 cut(s) 70, 764
BsiHKAI GWGCWC 1 cut(s) 561
BsiHKCI CYCGRG 6 cut(s) 119, 299, 459, 688, 1153, 1406
BsiSI CCGG 9 cut(s) 49, 272, 300, 497, 527, 551, 774, 808, 1130
BslFI GGGAC 5 cut(s) 53, 65, 709, 1075, 1100
BslI CCNNNNNNNGG 1 cut(s) 945
BsmAI GTCTC 4 cut(s) 187, 500, 735, 810
BsmBI CGTCTC 2 cut(s) 735, 810
BsmFI GGGAC 5 cut(s) 53, 65, 709, 1075, 1100
BsnI GGCC 3 cut(s) 45, 464, 1462
BsoBI CYCGRG 6 cut(s) 119, 299, 459, 688, 1153, 1406
Bsp119I TTCGAA 2 cut(s) 193, 995
Bsp1286I GDGCHC 2 cut(s) 561, 1545
Bsp143I GATC 9 cut(s) 490, 535, 541, 761, 841, 1324, 1423, 1444, 1630
BspANI GGCC 3 cut(s) 45, 464, 1462
BspCNI CTCAG 4 cut(s) 304, 849, 996, 1558
BspFNI CGCG 3 cut(s) 93, 213, 257
BspHI TCATGA 1 cut(s) 538
BspLI GGNNCC 7 cut(s) 240, 261, 297, 525, 531, 1063, 1411
BspPI GGATC 3 cut(s) 498, 536, 1332
BspQI GCTCTTC 1 cut(s) 992
BspT104I TTCGAA 2 cut(s) 193, 995
BspT107I GGYRCC 1 cut(s) 295
BsrBI CCGCTC 4 cut(s) 13, 230, 316, 951
BsrDI GCAATG 1 cut(s) 545
BsrFI RCCGGY 4 cut(s) 496, 550, 773, 807
BsrI ACTGG 3 cut(s) 41, 448, 902
BssAI RCCGGY 4 cut(s) 496, 550, 773, 807
BssECI CCNNGG 3 cut(s) 255, 299, 352
BssMI GATC 9 cut(s) 490, 535, 541, 761, 841, 1324, 1423, 1444, 1630
BssNI GRCGYC 4 cut(s) 269, 296, 432, 1109
BssSI CACGAG 1 cut(s) 1259
BssT1I CCWWGG 1 cut(s) 352
Bst2BI CACGAG 1 cut(s) 1259
Bst2UI CCWGG 2 cut(s) 360, 1621
Bst4CI ACNGT 2 cut(s) 246, 1552
Bst6I CTCTTC 3 cut(s) 615, 992, 1015
BstACI GRCGYC 4 cut(s) 269, 296, 432, 1109
BstBI TTCGAA 2 cut(s) 193, 995
BstDEI CTNAG 5 cut(s) 312, 836, 1004, 1291, 1566
BstDSI CCRYGG 1 cut(s) 255
BstF5I GGATG 6 cut(s) 125, 294, 1014, 1381, 1463, 1606
BstFNI CGCG 3 cut(s) 93, 213, 257
BstH2I RGCGCY 1 cut(s) 299
BstHHI GCGC 3 cut(s) 95, 215, 298
BstKTI GATC 9 cut(s) 493, 538, 544, 764, 844, 1327, 1426, 1447, 1633
BstMAI GTCTC 4 cut(s) 187, 500, 735, 810
BstMBI GATC 9 cut(s) 490, 535, 541, 761, 841, 1324, 1423, 1444, 1630
BstMCI CGRYCG 2 cut(s) 70, 764
BstMWI GCNNNNNNNGC 7 cut(s) 221, 402, 556, 677, 939, 948, 1053
BstNI CCWGG 2 cut(s) 360, 1621
BstNSI RCATGY 1 cut(s) 1541
BstPAI GACNNNNGTC 1 cut(s) 156
BstSCI CCNGG 5 cut(s) 48, 298, 299, 358, 1619
BstSLI GKGCMC 1 cut(s) 1545
BstUI CGCG 3 cut(s) 93, 213, 257
BstV1I GCAGC 2 cut(s) 236, 1438
BstV2I GAAGAC 2 cut(s) 787, 931
BstXI CCANNNNNNTGG 1 cut(s) 359
Bsu36I CCTNAGG 1 cut(s) 1004
BsuRI GGCC 3 cut(s) 45, 464, 1462
BtgI CCRYGG 1 cut(s) 255
BtsCI GGATG 6 cut(s) 125, 294, 1014, 1381, 1463, 1606
BtsIMutI CAGTG 3 cut(s) 309, 909, 1557
CciI TCATGA 1 cut(s) 538
CfoI GCGC 3 cut(s) 95, 215, 298
Cfr10I RCCGGY 4 cut(s) 496, 550, 773, 807
Cfr13I GGNCC 8 cut(s) 356, 462, 771, 1062, 1410, 1460, 1612, 1623
Cfr42I CCGCGG 1 cut(s) 258
Cfr9I CCCGGG 1 cut(s) 299
CpoI CGGWCCG 1 cut(s) 771
CseI GACGC 5 cut(s) 277, 421, 711, 752, 1117
Csp6I GTAC 3 cut(s) 703, 895, 972
CspAI ACCGGT 1 cut(s) 807
CspI CGGWCCG 1 cut(s) 771
CviAII CATG 6 cut(s) 177, 340, 539, 1337, 1538, 1575
CviQI GTAC 3 cut(s) 703, 895, 972
DdeI CTNAG 5 cut(s) 312, 836, 1004, 1291, 1566
DinI GGCGCC 1 cut(s) 297
DpnI GATC 9 cut(s) 492, 537, 543, 763, 843, 1326, 1425, 1446, 1632
DpnII GATC 9 cut(s) 490, 535, 541, 761, 841, 1324, 1423, 1444, 1630
Eam1104I CTCTTC 3 cut(s) 615, 992, 1015
EarI CTCTTC 3 cut(s) 615, 992, 1015
EciI GGCGGA 2 cut(s) 334, 658
Eco130I CCWWGG 1 cut(s) 352
Eco47I GGWCC 6 cut(s) 356, 771, 1062, 1410, 1612, 1623
Eco81I CCTNAGG 1 cut(s) 1004
Eco88I CYCGRG 6 cut(s) 119, 299, 459, 688, 1153, 1406
EcoO109I RGGNCCY 2 cut(s) 356, 1410
EcoRI GAATTC 2 cut(s) 982, 1381
EcoRII CCWGG 2 cut(s) 358, 1619
EcoT14I CCWWGG 1 cut(s) 352
EgeI GGCGCC 1 cut(s) 297
EheI GGCGCC 1 cut(s) 297
ErhI CCWWGG 1 cut(s) 352
Esp3I CGTCTC 2 cut(s) 735, 810
FaeI CATG 6 cut(s) 180, 343, 542, 1340, 1541, 1578
FalI AAGNNNNNCTT 2 cut(s) 1274, 1306
FaqI GGGAC 5 cut(s) 53, 65, 709, 1075, 1100
FatI CATG 6 cut(s) 176, 339, 538, 1336, 1537, 1574
FauI CCCGC 2 cut(s) 1150, 1398
FbaI TGATCA 2 cut(s) 535, 1444
FblI GTMKAC 1 cut(s) 248
Fnu4HI GCNGC 9 cut(s) 225, 228, 258, 317, 678, 952, 1112, 1115, 1452
FokI GGATG 6 cut(s) 112, 301, 1021, 1388, 1450, 1613
Fsp4HI GCNGC 9 cut(s) 225, 228, 258, 317, 678, 952, 1112, 1115, 1452
FspBI CTAG 1 cut(s) 1506
GlaI GCGC 3 cut(s) 94, 214, 297
GluI GCNGC 9 cut(s) 225, 228, 258, 317, 678, 952, 1112, 1115, 1452
HaeII RGCGCY 1 cut(s) 299
HaeIII GGCC 3 cut(s) 45, 464, 1462
HapII CCGG 9 cut(s) 49, 272, 300, 497, 527, 551, 774, 808, 1130
HgaI GACGC 5 cut(s) 277, 421, 711, 752, 1117
HhaI GCGC 3 cut(s) 95, 215, 298
Hin1I GRCGYC 4 cut(s) 269, 296, 432, 1109
Hin1II CATG 6 cut(s) 180, 343, 542, 1340, 1541, 1578
Hin6I GCGC 3 cut(s) 93, 213, 296
HinP1I GCGC 3 cut(s) 93, 213, 296
HincII GTYRAC 1 cut(s) 27
HindII GTYRAC 1 cut(s) 27
HindIII AAGCTT 1 cut(s) 591
HinfI GANTC 6 cut(s) 80, 518, 710, 829, 834, 1249
HpaII CCGG 9 cut(s) 49, 272, 300, 497, 527, 551, 774, 808, 1130
HphI GGTGA 1 cut(s) 919
Hpy166II GTNNAC 3 cut(s) 27, 249, 705
Hpy8I GTNNAC 3 cut(s) 27, 249, 705
HpyAV CCTTC 5 cut(s) 610, 938, 1465, 1480, 1583
HpyCH4III ACNGT 2 cut(s) 246, 1552
HpyCH4IV ACGT 1 cut(s) 23
HpyCH4V TGCA 5 cut(s) 334, 1298, 1316, 1351, 1537
HpyF10VI GCNNNNNNNGC 7 cut(s) 221, 402, 556, 677, 939, 948, 1053
HpyF3I CTNAG 5 cut(s) 312, 836, 1004, 1291, 1566
HpySE526I ACGT 1 cut(s) 23
Hsp92I GRCGYC 4 cut(s) 269, 296, 432, 1109
Hsp92II CATG 6 cut(s) 180, 343, 542, 1340, 1541, 1578
HspAI GCGC 3 cut(s) 93, 213, 296
KasI GGCGCC 1 cut(s) 295
Ksp22I TGATCA 2 cut(s) 535, 1444
KspI CCGCGG 1 cut(s) 258
Kzo9I GATC 9 cut(s) 490, 535, 541, 761, 841, 1324, 1423, 1444, 1630
LguI GCTCTTC 1 cut(s) 992
Lsp1109I GCAGC 2 cut(s) 236, 1438
LweI GCATC 3 cut(s) 134, 1285, 1591
MaeI CTAG 1 cut(s) 1506
MaeII ACGT 1 cut(s) 23
MalI GATC 9 cut(s) 492, 537, 543, 763, 843, 1326, 1425, 1446, 1632
MbiI CCGCTC 4 cut(s) 13, 230, 316, 951
MboI GATC 9 cut(s) 490, 535, 541, 761, 841, 1324, 1423, 1444, 1630
MfeI CAATTG 2 cut(s) 860, 1666
MhlI GDGCHC 2 cut(s) 561, 1545
MluCI AATT 6 cut(s) 163, 860, 982, 1269, 1381, 1666
Mly113I GGCGCC 1 cut(s) 296
MlyI GAGTC 3 cut(s) 89, 527, 828
MmeI TCCRAC 5 cut(s) 438, 468, 501, 555, 718
MseI TTAA 2 cut(s) 399, 1281
MslI CAYNNNNRTG 3 cut(s) 287, 1180, 1599
MspA1I CMGCKG 3 cut(s) 257, 1067, 1117
MspI CCGG 9 cut(s) 49, 272, 300, 497, 527, 551, 774, 808, 1130
MspR9I CCNGG 5 cut(s) 50, 300, 301, 360, 1621
MunI CAATTG 2 cut(s) 860, 1666
MvaI CCWGG 2 cut(s) 360, 1621
MvnI CGCG 3 cut(s) 93, 213, 257
MwoI GCNNNNNNNGC 7 cut(s) 221, 402, 556, 677, 939, 948, 1053
NarI GGCGCC 1 cut(s) 296
NciI CCSGG 3 cut(s) 50, 300, 301
NdeII GATC 9 cut(s) 490, 535, 541, 761, 841, 1324, 1423, 1444, 1630
NlaIII CATG 6 cut(s) 180, 343, 542, 1340, 1541, 1578
NlaIV GGNNCC 7 cut(s) 240, 261, 297, 525, 531, 1063, 1411
NspI RCATGY 1 cut(s) 1541
NspV TTCGAA 2 cut(s) 193, 995
PaeR7I CTCGAG 3 cut(s) 119, 688, 1153
PagI TCATGA 1 cut(s) 538
PciSI GCTCTTC 1 cut(s) 992
PcsI WCGNNNNNNNCGW 6 cut(s) 60, 63, 111, 719, 797, 992
PfeI GAWTC 3 cut(s) 710, 829, 1249
PflFI GACNNNGTC 1 cut(s) 371
PfoI TCCNGGA 1 cut(s) 48
PinAI ACCGGT 1 cut(s) 807
PkrI GCNGC 9 cut(s) 226, 229, 259, 318, 679, 953, 1113, 1116, 1453
Ple19I CGATCG 1 cut(s) 764
PleI GAGTC 3 cut(s) 88, 526, 828
PluTI GGCGCC 1 cut(s) 299
PpsI GAGTC 3 cut(s) 88, 526, 828
PpuMI RGGWCCY 2 cut(s) 356, 1410
PshAI GACNNNNGTC 1 cut(s) 156
Psp5II RGGWCCY 2 cut(s) 356, 1410
Psp6I CCWGG 2 cut(s) 358, 1619
PspGI CCWGG 2 cut(s) 358, 1619
PspN4I GGNNCC 7 cut(s) 240, 261, 297, 525, 531, 1063, 1411
PspPI GGNCC 8 cut(s) 356, 462, 771, 1062, 1410, 1460, 1612, 1623
PspPPI RGGWCCY 2 cut(s) 356, 1410
PspXI VCTCGAGB 2 cut(s) 119, 1153
PsyI GACNNNGTC 1 cut(s) 371
PvuI CGATCG 1 cut(s) 764
RsaI GTAC 3 cut(s) 704, 896, 973
RsaNI GTAC 3 cut(s) 703, 895, 972
RseI CAYNNNNRTG 3 cut(s) 287, 1180, 1599
Rsr2I CGGWCCG 1 cut(s) 771
RsrII CGGWCCG 1 cut(s) 771
SacII CCGCGG 1 cut(s) 258
SapI GCTCTTC 1 cut(s) 992
SaqAI TTAA 2 cut(s) 399, 1281
SatI GCNGC 9 cut(s) 225, 228, 258, 317, 678, 952, 1112, 1115, 1452
Sau3AI GATC 9 cut(s) 490, 535, 541, 761, 841, 1324, 1423, 1444, 1630
Sau96I GGNCC 8 cut(s) 356, 462, 771, 1062, 1410, 1460, 1612, 1623
SchI GAGTC 3 cut(s) 89, 527, 828
ScrFI CCNGG 5 cut(s) 50, 300, 301, 360, 1621
SduI GDGCHC 2 cut(s) 561, 1545
SfaNI GCATC 3 cut(s) 134, 1285, 1591
SfoI GGCGCC 1 cut(s) 297
Sfr274I CTCGAG 3 cut(s) 119, 688, 1153
Sfr303I CCGCGG 1 cut(s) 258
SfuI TTCGAA 2 cut(s) 193, 995
SgrBI CCGCGG 1 cut(s) 258
SinI GGWCC 6 cut(s) 356, 771, 1062, 1410, 1612, 1623
SlaI CTCGAG 3 cut(s) 119, 688, 1153
SmaI CCCGGG 1 cut(s) 301
SmiMI CAYNNNNRTG 3 cut(s) 287, 1180, 1599
SmlI CTYRAG 3 cut(s) 119, 688, 1153
SmoI CTYRAG 3 cut(s) 119, 688, 1153
Sse9I AATT 6 cut(s) 163, 860, 982, 1269, 1381, 1666
SspDI GGCGCC 1 cut(s) 295
SspMI CTAG 1 cut(s) 1506
StyD4I CCNGG 5 cut(s) 48, 298, 299, 358, 1619
StyI CCWWGG 1 cut(s) 352
TaaI ACNGT 2 cut(s) 246, 1552
TaiI ACGT 1 cut(s) 26
TaqII GACCGA 1 cut(s) 781
TasI AATT 6 cut(s) 163, 860, 982, 1269, 1381, 1666
TauI GCSGC 7 cut(s) 230, 260, 319, 680, 954, 1114, 1117
TfiI GAWTC 3 cut(s) 710, 829, 1249
Tru1I TTAA 2 cut(s) 399, 1281
Tru9I TTAA 2 cut(s) 399, 1281
TscAI CASTG 3 cut(s) 316, 909, 1557
TseI GCWGC 2 cut(s) 224, 1451
TspDTI ATGAA 7 cut(s) 17, 47, 156, 1164, 1325, 1385, 1548
TspGWI ACGGA 3 cut(s) 91, 554, 690
TspMI CCCGGG 1 cut(s) 299
TspRI CASTG 3 cut(s) 316, 909, 1557
Tth111I GACNNNGTC 1 cut(s) 371
VpaK11BI GGWCC 6 cut(s) 356, 771, 1062, 1410, 1612, 1623
XapI RAATTY 2 cut(s) 982, 1381
XceI RCATGY 1 cut(s) 1541
XhoI CTCGAG 3 cut(s) 119, 688, 1153
XmaI CCCGGG 1 cut(s) 299
XmiI GTMKAC 1 cut(s) 248
XspI CTAG 1 cut(s) 1506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.