Nodulin-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G39210 |
| fragaria_vesca | FvH4_6g16630 FvH4_7g18510 |
| malus_domestica | MD01G1101400.v1.1 MD04G1090400.v1.1 MD07G1168000.v1.1 |
| prunus_persica | Prupe.2G206600_v2.0.a1 Prupe.6G220200_v2.0.a1 Prupe.7G127100_v2.0.a1 |
| pyrus_communis | pycom07g16250 pycom12g10870 |
| rosa_chinensis | RchiOBHm_Chr1g0334871 RchiOBHm_Chr1g0362291 RchiOBHm_Chr3g0470591 |
| rosa_laevigata | RLG00000024257 RLG00000027655 RLG00000029413 |
| rosa_multiflora | Rmu_co8175752.1_g000001 Rmu_sc0000574.1_g000047 Rmu_sc0002115.1_g000014 Rmu_sc0007125.1_g000010 Rmu_ssc0000009.1_g000029 |
| rosa_roxburghii | Rroxscaffold_4G00294280 Rroxscaffold_6G00410710 |
| rosa_rugosa | Rorug01G0117400 Rorug01G0297200 Rorug03G0110100.1 |
| rosa_samantha | Rh1AG306000 Rh1BG108600 Rh1BG269500 Rh1CG287000 Rh1DG145500 Rh1DG299600 Rh3AG160300 Rh3BG184800 Rh3CG175300 Rh3DG189900 |
| rosa_wichuraiana | Rw1G011680 Rw1G027150 Rw3G015160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1592 |
| Acc16I | TGCGCA | 1 cut(s) | 1356 |
| AccB1I | GGYRCC | 1 cut(s) | 491 |
| AccI | GTMKAC | 3 cut(s) | 98, 232, 1029 |
| AccII | CGCG | 4 cut(s) | 227, 755, 1277, 1439 |
| AccIII | TCCGGA | 1 cut(s) | 1647 |
| AciI | CCGC | 6 cut(s) | 227, 753, 755, 1277, 1502, 1602 |
| AclI | AACGTT | 2 cut(s) | 213, 1467 |
| AclWI | GGATC | 4 cut(s) | 338, 415, 839, 1639 |
| AcsI | RAATTY | 1 cut(s) | 1229 |
| AcvI | CACGTG | 2 cut(s) | 420, 446 |
| AcyI | GRCGYC | 1 cut(s) | 492 |
| AfaI | GTAC | 2 cut(s) | 1406, 1490 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 63, 989 |
| AflII | CTTAAG | 1 cut(s) | 1400 |
| AflIII | ACRYGT | 3 cut(s) | 117, 354, 1032 |
| AgsI | TTSAA | 3 cut(s) | 196, 901, 1555 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1319 |
| AjiI | CACGTC | 2 cut(s) | 1495, 1569 |
| AleI | CACNNNNGTG | 2 cut(s) | 955, 1148 |
| AluBI | AGCT | 6 cut(s) | 36, 104, 508, 544, 814, 1706 |
| AluI | AGCT | 6 cut(s) | 36, 104, 508, 544, 814, 1706 |
| Alw21I | GWGCWC | 1 cut(s) | 546 |
| Alw26I | GTCTC | 5 cut(s) | 89, 365, 583, 1207, 1633 |
| AlwI | GGATC | 4 cut(s) | 338, 415, 839, 1639 |
| Ama87I | CYCGRG | 2 cut(s) | 671, 718 |
| Aor13HI | TCCGGA | 1 cut(s) | 1647 |
| AoxI | GGCC | 2 cut(s) | 1238, 1361 |
| ApeKI | GCWGC | 5 cut(s) | 8, 1706, 1724, 1733, 1736 |
| ApoI | RAATTY | 1 cut(s) | 1229 |
| AspLEI | GCGC | 5 cut(s) | 494, 752, 1277, 1357, 1729 |
| AspS9I | GGNCC | 2 cut(s) | 1258, 1650 |
| AsuC2I | CCSGG | 3 cut(s) | 18, 437, 1308 |
| AsuHPI | GGTGA | 5 cut(s) | 539, 926, 955, 1274, 1654 |
| AvaI | CYCGRG | 2 cut(s) | 671, 718 |
| AvaII | GGWCC | 2 cut(s) | 1258, 1650 |
| AxyI | CCTNAGG | 1 cut(s) | 154 |
| BanI | GGYRCC | 1 cut(s) | 491 |
| BanII | GRGCYC | 2 cut(s) | 546, 1445 |
| BbrPI | CACGTG | 2 cut(s) | 420, 446 |
| BbsI | GAAGAC | 2 cut(s) | 537, 1767 |
| Bbv12I | GWGCWC | 1 cut(s) | 546 |
| BbvI | GCAGC | 4 cut(s) | 1693, 1720, 1736, 1748 |
| BccI | CCATC | 9 cut(s) | 50, 57, 287, 863, 905, 1249, 1627, 1708, 1714 |
| BceAI | ACGGC | 2 cut(s) | 302, 1098 |
| BciVI | GTATCC | 1 cut(s) | 290 |
| BclI | TGATCA | 1 cut(s) | 1218 |
| BcnI | CCSGG | 3 cut(s) | 18, 437, 1308 |
| BcoDI | GTCTC | 5 cut(s) | 89, 365, 583, 1207, 1633 |
| BfmI | CTRYAG | 2 cut(s) | 573, 1734 |
| BfoI | RGCGCY | 3 cut(s) | 495, 753, 1730 |
| BfrI | CTTAAG | 1 cut(s) | 1400 |
| BfuI | GTATCC | 1 cut(s) | 290 |
| BglII | AGATCT | 3 cut(s) | 199, 1209, 1742 |
| BisI | GCNGC | 7 cut(s) | 9, 753, 1602, 1707, 1725, 1734, 1737 |
| BlsI | GCNGC | 7 cut(s) | 10, 754, 1603, 1708, 1726, 1735, 1738 |
| BmcAI | AGTACT | 1 cut(s) | 1406 |
| Bme1390I | CCNGG | 3 cut(s) | 18, 437, 1308 |
| Bme18I | GGWCC | 2 cut(s) | 1258, 1650 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1319 |
| BmeT110I | CYCGRG | 2 cut(s) | 671, 718 |
| BmgBI | CACGTC | 2 cut(s) | 1495, 1569 |
| BmgT120I | GGNCC | 2 cut(s) | 1258, 1650 |
| BmiI | GGNNCC | 5 cut(s) | 109, 208, 277, 379, 493 |
| BmrFI | CCNGG | 3 cut(s) | 18, 437, 1308 |
| BmsI | GCATC | 1 cut(s) | 1334 |
| BpiI | GAAGAC | 2 cut(s) | 537, 1767 |
| BpmI | CTGGAG | 1 cut(s) | 126 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1755 |
| BpuEI | CTTGAG | 1 cut(s) | 327 |
| BpuMI | CCSGG | 3 cut(s) | 18, 437, 1308 |
| BsaAI | YACGTR | 2 cut(s) | 420, 446 |
| BsaHI | GRCGYC | 1 cut(s) | 492 |
| BsaI | GGTCTC | 2 cut(s) | 1207, 1633 |
| BsaJI | CCNNGG | 5 cut(s) | 254, 753, 1235, 1306, 1749 |
| BsaWI | WCCGGW | 4 cut(s) | 56, 404, 982, 1647 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 198, 228 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 63, 989 |
| Bse118I | RCCGGY | 2 cut(s) | 568, 1729 |
| Bse21I | CCTNAGG | 1 cut(s) | 154 |
| Bse3DI | GCAATG | 1 cut(s) | 1364 |
| BseAI | TCCGGA | 1 cut(s) | 1647 |
| BseDI | CCNNGG | 5 cut(s) | 254, 753, 1235, 1306, 1749 |
| BseGI | GGATG | 4 cut(s) | 42, 261, 279, 1774 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 63, 989 |
| BseMI | GCAATG | 1 cut(s) | 1364 |
| BseMII | CTCAG | 4 cut(s) | 147, 861, 1197, 1377 |
| BseRI | GAGGAG | 4 cut(s) | 240, 1005, 1253, 1277 |
| BseXI | GCAGC | 4 cut(s) | 1693, 1720, 1736, 1748 |
| Bsh1236I | CGCG | 4 cut(s) | 227, 755, 1277, 1439 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1449 |
| BshFI | GGCC | 2 cut(s) | 1240, 1363 |
| BshNI | GGYRCC | 1 cut(s) | 491 |
| BsiEI | CGRYCG | 1 cut(s) | 1449 |
| BsiHKAI | GWGCWC | 1 cut(s) | 546 |
| BsiHKCI | CYCGRG | 2 cut(s) | 671, 718 |
| BsiSI | CCGG | 9 cut(s) | 18, 57, 405, 437, 569, 983, 1308, 1648, 1730 |
| BslFI | GGGAC | 2 cut(s) | 1087, 1289 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 63, 989 |
| BsmAI | GTCTC | 5 cut(s) | 89, 365, 583, 1207, 1633 |
| BsmFI | GGGAC | 2 cut(s) | 1087, 1289 |
| BsnI | GGCC | 2 cut(s) | 1240, 1363 |
| Bso31I | GGTCTC | 2 cut(s) | 1207, 1633 |
| BsoBI | CYCGRG | 2 cut(s) | 671, 718 |
| Bsp1286I | GDGCHC | 2 cut(s) | 546, 1445 |
| Bsp13I | TCCGGA | 1 cut(s) | 1647 |
| Bsp68I | TCGCGA | 1 cut(s) | 1439 |
| BspACI | CCGC | 6 cut(s) | 227, 753, 755, 1277, 1502, 1602 |
| BspANI | GGCC | 2 cut(s) | 1240, 1363 |
| BspCNI | CTCAG | 4 cut(s) | 146, 862, 1198, 1378 |
| BspEI | TCCGGA | 1 cut(s) | 1647 |
| BspFNI | CGCG | 4 cut(s) | 227, 755, 1277, 1439 |
| BspHI | TCATGA | 1 cut(s) | 303 |
| BspLI | GGNNCC | 5 cut(s) | 109, 208, 277, 379, 493 |
| BspMAI | CTGCAG | 1 cut(s) | 1738 |
| BspPI | GGATC | 4 cut(s) | 338, 415, 839, 1639 |
| BspQI | GCTCTTC | 1 cut(s) | 26 |
| BspT107I | GGYRCC | 1 cut(s) | 491 |
| BspTI | CTTAAG | 1 cut(s) | 1400 |
| BspTNI | GGTCTC | 2 cut(s) | 1207, 1633 |
| BsrDI | GCAATG | 1 cut(s) | 1364 |
| BsrFI | RCCGGY | 2 cut(s) | 568, 1729 |
| BssAI | RCCGGY | 2 cut(s) | 568, 1729 |
| BssECI | CCNNGG | 5 cut(s) | 254, 753, 1235, 1306, 1749 |
| BssNI | GRCGYC | 1 cut(s) | 492 |
| BssT1I | CCWWGG | 2 cut(s) | 254, 1235 |
| Bst4CI | ACNGT | 4 cut(s) | 515, 954, 970, 1750 |
| Bst6I | CTCTTC | 5 cut(s) | 26, 798, 912, 1124, 1371 |
| BstACI | GRCGYC | 1 cut(s) | 492 |
| BstAFI | CTTAAG | 1 cut(s) | 1400 |
| BstBAI | YACGTR | 2 cut(s) | 420, 446 |
| BstC8I | GCNNGC | 6 cut(s) | 315, 570, 678, 1014, 1441, 1731 |
| BstDEI | CTNAG | 9 cut(s) | 133, 154, 185, 485, 870, 1048, 1206, 1386, 1755 |
| BstDSI | CCRYGG | 2 cut(s) | 753, 1749 |
| BstEII | GGTNACC | 2 cut(s) | 1121, 1280 |
| BstF5I | GGATG | 4 cut(s) | 42, 261, 279, 1774 |
| BstFNI | CGCG | 4 cut(s) | 227, 755, 1277, 1439 |
| BstH2I | RGCGCY | 3 cut(s) | 495, 753, 1730 |
| BstHHI | GCGC | 5 cut(s) | 494, 752, 1277, 1357, 1729 |
| BstMAI | GTCTC | 5 cut(s) | 89, 365, 583, 1207, 1633 |
| BstMCI | CGRYCG | 1 cut(s) | 1449 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1246, 1706, 1730, 1733 |
| BstNSI | RCATGY | 3 cut(s) | 121, 358, 1036 |
| BstPI | GGTNACC | 2 cut(s) | 1121, 1280 |
| BstSCI | CCNGG | 3 cut(s) | 16, 435, 1306 |
| BstSFI | CTRYAG | 2 cut(s) | 573, 1734 |
| BstUI | CGCG | 4 cut(s) | 227, 755, 1277, 1439 |
| BstV1I | GCAGC | 4 cut(s) | 1693, 1720, 1736, 1748 |
| BstV2I | GAAGAC | 2 cut(s) | 537, 1767 |
| BstX2I | RGATCY | 5 cut(s) | 199, 330, 407, 1209, 1742 |
| BstYI | RGATCY | 5 cut(s) | 199, 330, 407, 1209, 1742 |
| Bsu36I | CCTNAGG | 1 cut(s) | 154 |
| BsuI | GTATCC | 1 cut(s) | 290 |
| BsuRI | GGCC | 2 cut(s) | 1240, 1363 |
| BtgI | CCRYGG | 2 cut(s) | 753, 1749 |
| BtgZI | GCGATG | 1 cut(s) | 1276 |
| BtrI | CACGTC | 2 cut(s) | 1495, 1569 |
| BtsCI | GGATG | 4 cut(s) | 42, 261, 279, 1774 |
| BtuMI | TCGCGA | 1 cut(s) | 1439 |
| Cac8I | GCNNGC | 6 cut(s) | 315, 570, 678, 1014, 1441, 1731 |
| CciI | TCATGA | 1 cut(s) | 303 |
| CfoI | GCGC | 5 cut(s) | 494, 752, 1277, 1357, 1729 |
| Cfr10I | RCCGGY | 2 cut(s) | 568, 1729 |
| Cfr13I | GGNCC | 2 cut(s) | 1258, 1650 |
| Cfr42I | CCGCGG | 1 cut(s) | 756 |
| Csp6I | GTAC | 2 cut(s) | 1405, 1489 |
| CviAII | CATG | 7 cut(s) | 70, 94, 118, 304, 355, 691, 1033 |
| CviQI | GTAC | 2 cut(s) | 1405, 1489 |
| DdeI | CTNAG | 9 cut(s) | 133, 154, 185, 485, 870, 1048, 1206, 1386, 1755 |
| DinI | GGCGCC | 1 cut(s) | 493 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1319 |
| Eam1104I | CTCTTC | 5 cut(s) | 26, 798, 912, 1124, 1371 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1319 |
| EarI | CTCTTC | 5 cut(s) | 26, 798, 912, 1124, 1371 |
| Ecl136II | GAGCTC | 1 cut(s) | 544 |
| Eco130I | CCWWGG | 2 cut(s) | 254, 1235 |
| Eco147I | AGGCCT | 1 cut(s) | 1240 |
| Eco24I | GRGCYC | 2 cut(s) | 546, 1445 |
| Eco31I | GGTCTC | 2 cut(s) | 1207, 1633 |
| Eco32I | GATATC | 2 cut(s) | 142, 1675 |
| Eco47I | GGWCC | 2 cut(s) | 1258, 1650 |
| Eco53kI | GAGCTC | 1 cut(s) | 544 |
| Eco72I | CACGTG | 2 cut(s) | 420, 446 |
| Eco81I | CCTNAGG | 1 cut(s) | 154 |
| Eco88I | CYCGRG | 2 cut(s) | 671, 718 |
| Eco91I | GGTNACC | 2 cut(s) | 1121, 1280 |
| EcoICRI | GAGCTC | 1 cut(s) | 544 |
| EcoO65I | GGTNACC | 2 cut(s) | 1121, 1280 |
| EcoRV | GATATC | 2 cut(s) | 142, 1675 |
| EcoT14I | CCWWGG | 2 cut(s) | 254, 1235 |
| EcoT38I | GRGCYC | 2 cut(s) | 546, 1445 |
| EgeI | GGCGCC | 1 cut(s) | 493 |
| EheI | GGCGCC | 1 cut(s) | 493 |
| ErhI | CCWWGG | 2 cut(s) | 254, 1235 |
| FaeI | CATG | 7 cut(s) | 73, 97, 121, 307, 358, 694, 1036 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 137, 169 |
| FaqI | GGGAC | 2 cut(s) | 1087, 1289 |
| FatI | CATG | 7 cut(s) | 69, 93, 117, 303, 354, 690, 1032 |
| FauI | CCCGC | 3 cut(s) | 220, 1270, 1495 |
| FauNDI | CATATG | 1 cut(s) | 1166 |
| FbaI | TGATCA | 1 cut(s) | 1218 |
| FblI | GTMKAC | 3 cut(s) | 98, 232, 1029 |
| Fnu4HI | GCNGC | 7 cut(s) | 9, 753, 1602, 1707, 1725, 1734, 1737 |
| FokI | GGATG | 4 cut(s) | 29, 248, 266, 1781 |
| FriOI | GRGCYC | 2 cut(s) | 546, 1445 |
| Fsp4HI | GCNGC | 7 cut(s) | 9, 753, 1602, 1707, 1725, 1734, 1737 |
| FspI | TGCGCA | 1 cut(s) | 1356 |
| GlaI | GCGC | 5 cut(s) | 493, 751, 1276, 1356, 1728 |
| GluI | GCNGC | 7 cut(s) | 9, 753, 1602, 1707, 1725, 1734, 1737 |
| GsuI | CTGGAG | 1 cut(s) | 126 |
| HaeII | RGCGCY | 3 cut(s) | 495, 753, 1730 |
| HaeIII | GGCC | 2 cut(s) | 1240, 1363 |
| HapII | CCGG | 9 cut(s) | 18, 57, 405, 437, 569, 983, 1308, 1648, 1730 |
| HhaI | GCGC | 5 cut(s) | 494, 752, 1277, 1357, 1729 |
| Hin1I | GRCGYC | 1 cut(s) | 492 |
| Hin1II | CATG | 7 cut(s) | 73, 97, 121, 307, 358, 694, 1036 |
| Hin6I | GCGC | 5 cut(s) | 492, 750, 1275, 1355, 1727 |
| HinP1I | GCGC | 5 cut(s) | 492, 750, 1275, 1355, 1727 |
| HincII | GTYRAC | 1 cut(s) | 99 |
| HindII | GTYRAC | 1 cut(s) | 99 |
| HindIII | AAGCTT | 1 cut(s) | 812 |
| HinfI | GANTC | 5 cut(s) | 219, 440, 463, 887, 920 |
| HpaII | CCGG | 9 cut(s) | 18, 57, 405, 437, 569, 983, 1308, 1648, 1730 |
| HphI | GGTGA | 5 cut(s) | 539, 926, 955, 1274, 1654 |
| Hpy166II | GTNNAC | 4 cut(s) | 99, 233, 1030, 1313 |
| Hpy188I | TCNGA | 6 cut(s) | 206, 275, 895, 1109, 1207, 1387 |
| Hpy188III | TCNNGA | 9 cut(s) | 268, 304, 334, 550, 1216, 1252, 1438, 1630, 1648 |
| Hpy8I | GTNNAC | 4 cut(s) | 99, 233, 1030, 1313 |
| Hpy99I | CGWCG | 3 cut(s) | 685, 958, 1496 |
| HpyAV | CCTTC | 3 cut(s) | 814, 934, 1535 |
| HpyCH4III | ACNGT | 4 cut(s) | 515, 954, 970, 1750 |
| HpyCH4IV | ACGT | 9 cut(s) | 213, 419, 445, 477, 683, 1145, 1467, 1494, 1568 |
| HpyCH4V | TGCA | 4 cut(s) | 11, 1012, 1560, 1736 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1246, 1706, 1730, 1733 |
| HpyF3I | CTNAG | 9 cut(s) | 133, 154, 185, 485, 870, 1048, 1206, 1386, 1755 |
| HpySE526I | ACGT | 9 cut(s) | 213, 419, 445, 477, 683, 1145, 1467, 1494, 1568 |
| Hsp92I | GRCGYC | 1 cut(s) | 492 |
| Hsp92II | CATG | 7 cut(s) | 73, 97, 121, 307, 358, 694, 1036 |
| HspAI | GCGC | 5 cut(s) | 492, 750, 1275, 1355, 1727 |
| KasI | GGCGCC | 1 cut(s) | 491 |
| Kpn2I | TCCGGA | 1 cut(s) | 1647 |
| KroI | GCCGGC | 2 cut(s) | 568, 1729 |
| KroNI | GCCGGC | 2 cut(s) | 570, 1731 |
| Ksp22I | TGATCA | 1 cut(s) | 1218 |
| KspI | CCGCGG | 1 cut(s) | 756 |
| LguI | GCTCTTC | 1 cut(s) | 26 |
| LmnI | GCTCC | 4 cut(s) | 107, 206, 275, 377 |
| Lsp1109I | GCAGC | 4 cut(s) | 1693, 1720, 1736, 1748 |
| LweI | GCATC | 1 cut(s) | 1334 |
| MaeII | ACGT | 9 cut(s) | 213, 419, 445, 477, 683, 1145, 1467, 1494, 1568 |
| MaeIII | GTNAC | 9 cut(s) | 244, 319, 415, 441, 865, 1121, 1152, 1280, 1606 |
| MflI | RGATCY | 5 cut(s) | 199, 330, 407, 1209, 1742 |
| MhlI | GDGCHC | 2 cut(s) | 546, 1445 |
| MluCI | AATT | 5 cut(s) | 1093, 1171, 1229, 1555, 1596 |
| Mly113I | GGCGCC | 1 cut(s) | 492 |
| MlyI | GAGTC | 3 cut(s) | 228, 449, 929 |
| MmeI | TCCRAC | 3 cut(s) | 196, 355, 941 |
| MroI | TCCGGA | 1 cut(s) | 1647 |
| MroNI | GCCGGC | 2 cut(s) | 568, 1729 |
| MslI | CAYNNNNRTG | 4 cut(s) | 116, 551, 955, 1148 |
| MspA1I | CMGCKG | 3 cut(s) | 104, 755, 1604 |
| MspCI | CTTAAG | 1 cut(s) | 1400 |
| MspI | CCGG | 9 cut(s) | 18, 57, 405, 437, 569, 983, 1308, 1648, 1730 |
| MspR9I | CCNGG | 3 cut(s) | 18, 437, 1308 |
| MvnI | CGCG | 4 cut(s) | 227, 755, 1277, 1439 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1246, 1706, 1730, 1733 |
| NaeI | GCCGGC | 2 cut(s) | 570, 1731 |
| NarI | GGCGCC | 1 cut(s) | 492 |
| NciI | CCSGG | 3 cut(s) | 18, 437, 1308 |
| NdeI | CATATG | 1 cut(s) | 1166 |
| NgoMIV | GCCGGC | 2 cut(s) | 568, 1729 |
| NlaIII | CATG | 7 cut(s) | 73, 97, 121, 307, 358, 694, 1036 |
| NlaIV | GGNNCC | 5 cut(s) | 109, 208, 277, 379, 493 |
| NmeAIII | GCCGAG | 1 cut(s) | 1735 |
| NmuCI | GTSAC | 5 cut(s) | 319, 415, 441, 1152, 1280 |
| NruI | TCGCGA | 1 cut(s) | 1439 |
| NsbI | TGCGCA | 1 cut(s) | 1356 |
| NspI | RCATGY | 3 cut(s) | 121, 358, 1036 |
| OliI | CACNNNNGTG | 2 cut(s) | 955, 1148 |
| PagI | TCATGA | 1 cut(s) | 303 |
| PceI | AGGCCT | 1 cut(s) | 1240 |
| PciI | ACATGT | 3 cut(s) | 117, 354, 1032 |
| PciSI | GCTCTTC | 1 cut(s) | 26 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 210, 420, 840, 962 |
| PdiI | GCCGGC | 2 cut(s) | 570, 1731 |
| PfeI | GAWTC | 2 cut(s) | 463, 887 |
| PfoI | TCCNGGA | 1 cut(s) | 435 |
| PkrI | GCNGC | 7 cut(s) | 10, 754, 1603, 1708, 1726, 1735, 1738 |
| Ple19I | CGATCG | 1 cut(s) | 1449 |
| PleI | GAGTC | 3 cut(s) | 227, 448, 928 |
| PluTI | GGCGCC | 1 cut(s) | 495 |
| PmaCI | CACGTG | 2 cut(s) | 420, 446 |
| PmlI | CACGTG | 2 cut(s) | 420, 446 |
| PpsI | GAGTC | 3 cut(s) | 227, 448, 928 |
| Ppu21I | YACGTR | 2 cut(s) | 420, 446 |
| PscI | ACATGT | 3 cut(s) | 117, 354, 1032 |
| PsiI | TTATAA | 1 cut(s) | 1592 |
| Psp124BI | GAGCTC | 1 cut(s) | 546 |
| Psp1406I | AACGTT | 2 cut(s) | 213, 1467 |
| PspCI | CACGTG | 2 cut(s) | 420, 446 |
| PspEI | GGTNACC | 2 cut(s) | 1121, 1280 |
| PspN4I | GGNNCC | 5 cut(s) | 109, 208, 277, 379, 493 |
| PspPI | GGNCC | 2 cut(s) | 1258, 1650 |
| PstI | CTGCAG | 1 cut(s) | 1738 |
| PsuI | RGATCY | 5 cut(s) | 199, 330, 407, 1209, 1742 |
| PvuI | CGATCG | 1 cut(s) | 1449 |
| PvuII | CAGCTG | 1 cut(s) | 104 |
| RruI | TCGCGA | 1 cut(s) | 1439 |
| RsaI | GTAC | 2 cut(s) | 1406, 1490 |
| RsaNI | GTAC | 2 cut(s) | 1405, 1489 |
| RseI | CAYNNNNRTG | 4 cut(s) | 116, 551, 955, 1148 |
| SacI | GAGCTC | 1 cut(s) | 546 |
| SacII | CCGCGG | 1 cut(s) | 756 |
| SalI | GTCGAC | 1 cut(s) | 97 |
| SapI | GCTCTTC | 1 cut(s) | 26 |
| SatI | GCNGC | 7 cut(s) | 9, 753, 1602, 1707, 1725, 1734, 1737 |
| Sau96I | GGNCC | 2 cut(s) | 1258, 1650 |
| ScaI | AGTACT | 1 cut(s) | 1406 |
| SchI | GAGTC | 3 cut(s) | 228, 449, 929 |
| ScrFI | CCNGG | 3 cut(s) | 18, 437, 1308 |
| SduI | GDGCHC | 2 cut(s) | 546, 1445 |
| SfaNI | GCATC | 1 cut(s) | 1334 |
| SfcI | CTRYAG | 2 cut(s) | 573, 1734 |
| SfoI | GGCGCC | 1 cut(s) | 493 |
| Sfr303I | CCGCGG | 1 cut(s) | 756 |
| SgrBI | CCGCGG | 1 cut(s) | 756 |
| SinI | GGWCC | 2 cut(s) | 1258, 1650 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 116, 551, 955, 1148 |
| SmlI | CTYRAG | 2 cut(s) | 342, 1400 |
| SmoI | CTYRAG | 2 cut(s) | 342, 1400 |
| Sse9I | AATT | 5 cut(s) | 1093, 1171, 1229, 1555, 1596 |
| SseBI | AGGCCT | 1 cut(s) | 1240 |
| SsiI | CCGC | 6 cut(s) | 227, 753, 755, 1277, 1502, 1602 |
| SspDI | GGCGCC | 1 cut(s) | 491 |
| SstI | GAGCTC | 1 cut(s) | 546 |
| StuI | AGGCCT | 1 cut(s) | 1240 |
| StyD4I | CCNGG | 3 cut(s) | 16, 435, 1306 |
| StyI | CCWWGG | 2 cut(s) | 254, 1235 |
| TaaI | ACNGT | 4 cut(s) | 515, 954, 970, 1750 |
| TaiI | ACGT | 9 cut(s) | 216, 422, 448, 480, 686, 1148, 1470, 1497, 1571 |
| TaqI | TCGA | 4 cut(s) | 98, 335, 1412, 1631 |
| TaqII | GACCGA | 1 cut(s) | 1318 |
| TasI | AATT | 5 cut(s) | 1093, 1171, 1229, 1555, 1596 |
| TatI | WGTACW | 1 cut(s) | 1404 |
| TauI | GCSGC | 2 cut(s) | 755, 1604 |
| TfiI | GAWTC | 2 cut(s) | 463, 887 |
| TseFI | GTSAC | 5 cut(s) | 319, 415, 441, 1152, 1280 |
| TseI | GCWGC | 5 cut(s) | 8, 1706, 1724, 1733, 1736 |
| Tsp45I | GTSAC | 5 cut(s) | 319, 415, 441, 1152, 1280 |
| TspDTI | ATGAA | 6 cut(s) | 44, 58, 250, 292, 626, 879 |
| TspGWI | ACGGA | 2 cut(s) | 338, 343 |
| Vha464I | CTTAAG | 1 cut(s) | 1400 |
| VpaK11BI | GGWCC | 2 cut(s) | 1258, 1650 |
| XapI | RAATTY | 1 cut(s) | 1229 |
| XceI | RCATGY | 3 cut(s) | 121, 358, 1036 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1747 |
| XmiI | GTMKAC | 3 cut(s) | 98, 232, 1029 |
| ZrmI | AGTACT | 1 cut(s) | 1406 |