Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002588

Physical Location & Seq

Genomic Coordinates Forward (+)

14409584 .. 14411365

Gene Structure 1782 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00294280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGACGGTTTGCGGTCCCGGCAGATGGGCCGACACCAAAGGCATGACCCTCCAGGTCCTCAACGGCCGGTGGTTCATGGTCTTTGCATGTCTTTTAATCATGTCCGCTGCCGGCGCCACCTACATGTTCGGCCTCTACTCTCCCGACATCAAAACGGTCCTCGGCTACGACCAAAGCACACTCAACCTCCTCAGCTTCTTCAAAGACATGGGCTCCAACGTCGGCATCCTCTCTGGCCTCCTCAACGAGGTCACGCCGCCGTGGGTGGTTCTCTTGGTCGGCGCCGTCCTCAACTTCTTCGGATACTTAATGATCTGGCTCTCCGTCACCAAGAAAATCGCCAGACCAAAAGTCTGGCAGATGTGCCTCTACATTTGCATCGGCGCCAATTCCCAGTCGTTCGCCAACACCGGCTCGCTGGTCACGTGCGTCAAGAACTTCCCCGAGAGCCGTGGTGTCGTTTTGGGGCTCCTCAAGGGCTACGTCGGCCTCAGCGGCGCCATCATCACGCAGATGTATTTTGCTTTTTACTACGACGACACCAGAGCCTTGATTCTGCTCATCGGGTGGCTTCCGGCGGCCATATCGTTCGCCTTTCTGAAGACTATTAGGATCATGAAGGTGATCAGACAAAGCAACGAGGTCAAGGTGTTCTACAACATGTTGTACATCTCTCTCGGGCTCGCTGGCTTTCTGATGATCATGATCATAATACAGAATAGGGTGCACTTCACTCAAGGGGAGTACGGAGCCAGCACCGCCATGGTGATCTTCTTGCTCGCCCTCCCCATCGTGGTGGTTGTAATTGAGGAGTACAAGATTTGGGAGAGCAAAAAACTCGAGATAAACGGTGACGTCAAAATAGTCACTGAAAAGCCCATCCCTGCTGCCGTCCCAACTGATAAACAATTGGTGGATGAAGCTCTTGATGAGTCCACCGCGGAACCTACCCAATCTTGTTGGAAAACTTGTTTTCAGCCACCAAATAGAGGGGAGGACTACACAATTCTCCAAGCTCTATTCAGCATTGACATGCTCATACTATTCATAGCGTGCATATGTGGTGTTGGGGGCACATTGACAGCAATTGACAATTTGGGTCAGATTGGGACTTCGTTGGGATATGCCAAACGCAGCAGGAGTACTTTCGTGTCCCTAGTCAGCATATGGAATTATCTCGGTCGTGTTGTTGCCGGATTCTACTCTGAATTCTTACTAAAACGATACAAATTCCCTCGTCCTCTCATTTTGACCCTAACCCTCTTGCTCTCTTGCGTTGGTCATCTCCTCATTGCCTTCAATGTTAAAAATGGCCTCTACCTGGCCTCAGTCATAATAGGGTTTTGCTTCGGCGCGCAATGGCCTTTGCTCTTCGCCATAATCTCCGAGCTCTTCGGGCTCAAGTACTACTCAACCTTGTACAATTTCGGTTCAGCCGCGAGCCCCGTGGGCTTGTACCTGCTCAACGTGAAACTCACCGGTCATGTGTACGATAAGGAGGCGAGGAAGCAATTGGCGGCTTCAGGGCTCACTAGGAAGGAAGGGGAGGAGTTGAATTGCATGGGTGGAGAGTGCTTCAAGTTGTCCTTTATTATAATTACAGCTGCCACATTTTTTGGGGCACTGGTTTCACTGATTTTAGTGATGAGGACAAGGAAGTTTTACCAGAGTGATATATACAAGAAGTTCAGAGAGGAGGCAGAAAAAAATGCTGAGACTGAAATGGCCGTGGGAGAAAATGGTGTCACCAATGGCCATCACCAAACCAATGAAAGATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1 Nodulin-like

Protein Analysis

593

Amino Acids

65.83

Weight (kDa)

8.84

Isoelectric Point (pI)

33.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	19 - 168	6.5e-08	Major Facilitator Superfamily
Nodulin-like	PF06813	23 - 268	1.4e-93	Nodulin-like
NFD4_C	PF23262	340 - 555	2.4e-19	NFD4, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39210
fragaria_vesca	FvH4_6g16630 FvH4_7g18510
malus_domestica	MD01G1101400.v1.1 MD04G1090400.v1.1 MD07G1168000.v1.1
prunus_persica	Prupe.2G206600_v2.0.a1 Prupe.6G220200_v2.0.a1 Prupe.7G127100_v2.0.a1
pyrus_communis	pycom07g16250 pycom12g10870
rosa_chinensis	RchiOBHm_Chr1g0334871 RchiOBHm_Chr1g0362291 RchiOBHm_Chr3g0470591
rosa_laevigata	RLG00000024257 RLG00000027655 RLG00000029413
rosa_multiflora	Rmu_co8175752.1_g000001 Rmu_sc0000574.1_g000047 Rmu_sc0002115.1_g000014 Rmu_sc0007125.1_g000010 Rmu_ssc0000009.1_g000029
rosa_roxburghii	Rroxscaffold_4G00294280 Rroxscaffold_6G00410710
rosa_rugosa	Rorug01G0117400 Rorug01G0297200 Rorug03G0110100.1
rosa_samantha	Rh1AG306000 Rh1BG108600 Rh1BG269500 Rh1CG287000 Rh1DG145500 Rh1DG299600 Rh3AG160300 Rh3BG184800 Rh3CG175300 Rh3DG189900
rosa_wichuraiana	Rw1G011680 Rw1G027150 Rw3G015160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1595
AatII	GACGTC	1 cut(s)	858
Acc36I	ACCTGC	1 cut(s)	1467
AccB1I	GGYRCC	4 cut(s)	113, 281, 383, 497
AccII	CGCG	3 cut(s)	941, 1355, 1439
AclWI	GGATC	1 cut(s)	620
AcoI	YGGCCR	4 cut(s)	64, 579, 1725, 1753
AcsI	RAATTY	2 cut(s)	1208, 1229
AcuI	CTGAAG	2 cut(s)	620, 1506
AcvI	CACGTG	1 cut(s)	426
AcyI	GRCGYC	5 cut(s)	114, 282, 384, 498, 855
AfaI	GTAC	8 cut(s)	668, 746, 815, 1144, 1406, 1421, 1457, 1490
AfiI	CCNNNNNNNGG	5 cut(s)	24, 247, 793, 989, 1321
AflIII	ACRYGT	2 cut(s)	123, 660
AgeI	ACCGGT	1 cut(s)	1478
AgsI	TTSAA	4 cut(s)	202, 1300, 1555, 1579
AhdI	GACNNNNNGTC	1 cut(s)	350
AjnI	CCWGG	2 cut(s)	51, 1320
AluBI	AGCT	5 cut(s)	195, 923, 1016, 1390, 1604
AluI	AGCT	5 cut(s)	195, 923, 1016, 1390, 1604
Alw21I	GWGCWC	2 cut(s)	729, 1392
Alw26I	GTCTC	1 cut(s)	1709
Alw44I	GTGCAC	1 cut(s)	725
AlwI	GGATC	1 cut(s)	620
Ama87I	CYCGRG	3 cut(s)	443, 677, 839
ApaLI	GTGCAC	1 cut(s)	725
ApeKI	GCWGC	4 cut(s)	107, 887, 1134, 1604
ApoI	RAATTY	2 cut(s)	1208, 1229
AsiGI	ACCGGT	1 cut(s)	1478
AspLEI	GCGC	6 cut(s)	116, 284, 386, 500, 1355, 1357
AspS9I	GGNCC	4 cut(s)	14, 27, 55, 157
AsuC2I	CCSGG	1 cut(s)	18
AsuHPI	GGTGA	7 cut(s)	319, 634, 778, 863, 1468, 1738, 1751
AvaI	CYCGRG	3 cut(s)	443, 677, 839
AvaII	GGWCC	3 cut(s)	14, 55, 157
BaeGI	GKGCMC	3 cut(s)	729, 1076, 1624
BalI	TGGCCA	1 cut(s)	1755
BanI	GGYRCC	4 cut(s)	113, 281, 383, 497
BanII	GRGCYC	7 cut(s)	215, 471, 684, 1392, 1401, 1445, 1530
BbrPI	CACGTG	1 cut(s)	426
BbsI	GAAGAC	1 cut(s)	608
Bbv12I	GWGCWC	2 cut(s)	729, 1392
BbvCI	CCTCAGC	2 cut(s)	191, 491
BbvI	GCAGC	4 cut(s)	94, 874, 1146, 1591
BccI	CCATC	5 cut(s)	18, 509, 797, 887, 1764
BceAI	ACGGC	6 cut(s)	79, 244, 269, 435, 875, 1712
BcgI	CGANNNNNNTGC	2 cut(s)	820, 854
BciT130I	CCWGG	2 cut(s)	53, 1322
BciVI	GTATCC	1 cut(s)	296
BclI	TGATCA	3 cut(s)	624, 699, 705
BcnI	CCSGG	1 cut(s)	18
BcoDI	GTCTC	1 cut(s)	1709
BfaI	CTAG	2 cut(s)	1157, 1533
BfoI	RGCGCY	4 cut(s)	117, 285, 387, 501
BfuAI	ACCTGC	1 cut(s)	1467
BfuI	GTATCC	1 cut(s)	296
BglI	GCCNNNNNGGC	2 cut(s)	495, 1449
BisI	GCNGC	9 cut(s)	108, 257, 496, 579, 888, 1135, 1437, 1518, 1605
BlsI	GCNGC	9 cut(s)	109, 258, 497, 580, 889, 1136, 1438, 1519, 1606
BmcAI	AGTACT	2 cut(s)	1144, 1406
Bme1390I	CCNGG	3 cut(s)	18, 53, 1322
Bme18I	GGWCC	3 cut(s)	14, 55, 157
BmeRI	GACNNNNNGTC	1 cut(s)	350
BmeT110I	CYCGRG	3 cut(s)	443, 677, 839
BmgT120I	GGNCC	4 cut(s)	14, 27, 55, 157
BmiI	GGNNCC	9 cut(s)	16, 115, 214, 283, 385, 470, 499, 751, 945
BmrFI	CCNGG	3 cut(s)	18, 53, 1322
BmrI	ACTGGG	1 cut(s)	388
BmsI	GCATC	2 cut(s)	234, 387
BmuI	ACTGGG	1 cut(s)	388
BpiI	GAAGAC	1 cut(s)	608
BpmI	CTGGAG	1 cut(s)	35
Bpu10I	CCTNAGC	2 cut(s)	191, 491
BpuEI	CTTGAG	3 cut(s)	458, 720, 1385
BpuMI	CCSGG	1 cut(s)	18
BsaAI	YACGTR	1 cut(s)	426
BsaBI	GATNNNNATC	1 cut(s)	704
BsaHI	GRCGYC	5 cut(s)	114, 282, 384, 498, 855
BsaJI	CCNNGG	7 cut(s)	160, 260, 451, 762, 939, 1446, 1728
BsaWI	WCCGGW	1 cut(s)	1478
BsaXI	ACNNNNNCTCC	4 cut(s)	171, 197, 201, 227
Bsc4I	CCNNNNNNNGG	5 cut(s)	24, 247, 793, 989, 1321
Bse118I	RCCGGY	4 cut(s)	66, 110, 410, 1478
Bse1I	ACTGG	2 cut(s)	394, 1629
Bse3DI	GCAATG	2 cut(s)	1290, 1364
Bse8I	GATNNNNATC	1 cut(s)	704
BseBI	CCWGG	2 cut(s)	53, 1322
BseDI	CCNNGG	7 cut(s)	160, 260, 451, 762, 939, 1446, 1728
BseGI	GGATG	3 cut(s)	225, 879, 922
BseJI	GATNNNNATC	1 cut(s)	704
BseLI	CCNNNNNNNGG	5 cut(s)	24, 247, 793, 989, 1321
BseMI	GCAATG	2 cut(s)	1290, 1364
BseMII	CTCAG	4 cut(s)	205, 505, 1341, 1704
BseNI	ACTGG	2 cut(s)	394, 1629
BsePI	GCGCGC	1 cut(s)	1353
BseRI	GAGGAG	7 cut(s)	179, 230, 461, 824, 1277, 1562, 1709
BseSI	GKGCMC	3 cut(s)	729, 1076, 1624
BseX3I	CGGCCG	1 cut(s)	64
BseXI	GCAGC	4 cut(s)	94, 874, 1146, 1591
Bsh1236I	CGCG	3 cut(s)	941, 1355, 1439
Bsh1285I	CGRYCG	2 cut(s)	67, 1183
BshNI	GGYRCC	4 cut(s)	113, 281, 383, 497
BshTI	ACCGGT	1 cut(s)	1478
BsiEI	CGRYCG	2 cut(s)	67, 1183
BsiHKAI	GWGCWC	2 cut(s)	729, 1392
BsiHKCI	CYCGRG	3 cut(s)	443, 677, 839
BsiSI	CCGG	7 cut(s)	18, 67, 111, 411, 575, 1194, 1479
BslFI	GGGAC	3 cut(s)	878, 1123, 1138
BslI	CCNNNNNNNGG	5 cut(s)	24, 247, 793, 989, 1321
BsmAI	GTCTC	1 cut(s)	1709
BsmFI	GGGAC	3 cut(s)	878, 1123, 1138
BsoBI	CYCGRG	3 cut(s)	443, 677, 839
Bsp1407I	TGTACA	2 cut(s)	666, 1419
Bsp143I	GATC	7 cut(s)	312, 612, 624, 699, 705, 768, 1775
Bsp19I	CCATGG	1 cut(s)	762
BspCNI	CTCAG	4 cut(s)	204, 504, 1340, 1705
BspFNI	CGCG	3 cut(s)	941, 1355, 1439
BspHI	TCATGA	2 cut(s)	615, 702
BspLI	GGNNCC	9 cut(s)	16, 115, 214, 283, 385, 470, 499, 751, 945
BspMI	ACCTGC	1 cut(s)	1467
BspPI	GGATC	1 cut(s)	620
BspQI	GCTCTTC	2 cut(s)	1376, 1397
BspT107I	GGYRCC	4 cut(s)	113, 281, 383, 497
BsrDI	GCAATG	2 cut(s)	1290, 1364
BsrFI	RCCGGY	4 cut(s)	66, 110, 410, 1478
BsrGI	TGTACA	2 cut(s)	666, 1419
BsrI	ACTGG	2 cut(s)	394, 1629
BssAI	RCCGGY	4 cut(s)	66, 110, 410, 1478
BssECI	CCNNGG	7 cut(s)	160, 260, 451, 762, 939, 1446, 1728
BssHII	GCGCGC	1 cut(s)	1353
BssMI	GATC	7 cut(s)	312, 612, 624, 699, 705, 768, 1775
BssNI	GRCGYC	5 cut(s)	114, 282, 384, 498, 855
BssT1I	CCWWGG	1 cut(s)	762
Bst2UI	CCWGG	2 cut(s)	53, 1322
Bst4CI	ACNGT	3 cut(s)	7, 157, 851
Bst6I	CTCTTC	2 cut(s)	1376, 1397
BstACI	GRCGYC	5 cut(s)	114, 282, 384, 498, 855
BstAUI	TGTACA	2 cut(s)	666, 1419
BstBAI	YACGTR	1 cut(s)	426
BstC8I	GCNNGC	9 cut(s)	112, 416, 684, 688, 754, 780, 1054, 1355, 1441
BstDEI	CTNAG	4 cut(s)	191, 491, 1327, 1713
BstDSI	CCRYGG	6 cut(s)	260, 451, 762, 939, 1446, 1728
BstENI	CCTNNNNNAGG	1 cut(s)	245
BstF5I	GGATG	3 cut(s)	225, 879, 922
BstFNI	CGCG	3 cut(s)	941, 1355, 1439
BstH2I	RGCGCY	4 cut(s)	117, 285, 387, 501
BstHHI	GCGC	6 cut(s)	116, 284, 386, 500, 1355, 1357
BstKTI	GATC	7 cut(s)	315, 615, 627, 702, 708, 771, 1778
BstMAI	GTCTC	1 cut(s)	1709
BstMBI	GATC	7 cut(s)	312, 612, 624, 699, 705, 768, 1775
BstMCI	CGRYCG	2 cut(s)	67, 1183
BstMWI	GCNNNNNNNGC	7 cut(s)	18, 113, 486, 495, 758, 1396, 1449
BstNI	CCWGG	2 cut(s)	53, 1322
BstNSI	RCATGY	4 cut(s)	90, 127, 664, 1036
BstSCI	CCNGG	3 cut(s)	16, 51, 1320
BstSLI	GKGCMC	3 cut(s)	729, 1076, 1624
BstUI	CGCG	3 cut(s)	941, 1355, 1439
BstV1I	GCAGC	4 cut(s)	94, 874, 1146, 1591
BstV2I	GAAGAC	1 cut(s)	608
BstXI	CCANNNNNNTGG	2 cut(s)	354, 796
BstZI	CGGCCG	1 cut(s)	64
BsuI	GTATCC	1 cut(s)	296
BtgI	CCRYGG	6 cut(s)	260, 451, 762, 939, 1446, 1728
BtsCI	GGATG	3 cut(s)	225, 879, 922
BtsIMutI	CAGTG	3 cut(s)	867, 1622, 1631
BveI	ACCTGC	1 cut(s)	1467
Cac8I	GCNNGC	9 cut(s)	112, 416, 684, 688, 754, 780, 1054, 1355, 1441
CciI	TCATGA	2 cut(s)	615, 702
CfoI	GCGC	6 cut(s)	116, 284, 386, 500, 1355, 1357
Cfr10I	RCCGGY	4 cut(s)	66, 110, 410, 1478
Cfr13I	GGNCC	4 cut(s)	14, 27, 55, 157
Cfr42I	CCGCGG	1 cut(s)	942
CseI	GACGC	1 cut(s)	418
Csp6I	GTAC	8 cut(s)	667, 745, 814, 1143, 1405, 1420, 1456, 1489
CspAI	ACCGGT	1 cut(s)	1478
CspCI	CAANNNNNGTGG	2 cut(s)	1597, 1632
CviQI	GTAC	8 cut(s)	667, 745, 814, 1143, 1405, 1420, 1456, 1489
DdeI	CTNAG	4 cut(s)	191, 491, 1327, 1713
DinI	GGCGCC	4 cut(s)	115, 283, 385, 499
DpnI	GATC	7 cut(s)	314, 614, 626, 701, 707, 770, 1777
DpnII	GATC	7 cut(s)	312, 612, 624, 699, 705, 768, 1775
DriI	GACNNNNNGTC	1 cut(s)	350
EaeI	YGGCCR	4 cut(s)	64, 579, 1725, 1753
EagI	CGGCCG	1 cut(s)	64
Eam1104I	CTCTTC	2 cut(s)	1376, 1397
Eam1105I	GACNNNNNGTC	1 cut(s)	350
EarI	CTCTTC	2 cut(s)	1376, 1397
Ecl136II	GAGCTC	1 cut(s)	1390
EclXI	CGGCCG	1 cut(s)	64
Eco130I	CCWWGG	1 cut(s)	762
Eco24I	GRGCYC	7 cut(s)	215, 471, 684, 1392, 1401, 1445, 1530
Eco47I	GGWCC	3 cut(s)	14, 55, 157
Eco52I	CGGCCG	1 cut(s)	64
Eco53kI	GAGCTC	1 cut(s)	1390
Eco57I	CTGAAG	2 cut(s)	620, 1506
Eco72I	CACGTG	1 cut(s)	426
Eco88I	CYCGRG	3 cut(s)	443, 677, 839
EcoICRI	GAGCTC	1 cut(s)	1390
EcoNI	CCTNNNNNAGG	1 cut(s)	245
EcoO109I	RGGNCCY	1 cut(s)	55
EcoRI	GAATTC	1 cut(s)	1208
EcoRII	CCWGG	2 cut(s)	51, 1320
EcoT14I	CCWWGG	1 cut(s)	762
EcoT38I	GRGCYC	7 cut(s)	215, 471, 684, 1392, 1401, 1445, 1530
EgeI	GGCGCC	4 cut(s)	115, 283, 385, 499
EheI	GGCGCC	4 cut(s)	115, 283, 385, 499
ErhI	CCWWGG	1 cut(s)	762
FalI	AAGNNNNNCTT	2 cut(s)	1571, 1603
FaqI	GGGAC	3 cut(s)	878, 1123, 1138
FauNDI	CATATG	2 cut(s)	1058, 1166
FbaI	TGATCA	3 cut(s)	624, 699, 705
Fnu4HI	GCNGC	9 cut(s)	108, 257, 496, 579, 888, 1135, 1437, 1518, 1605
FokI	GGATG	3 cut(s)	212, 866, 929
FriOI	GRGCYC	7 cut(s)	215, 471, 684, 1392, 1401, 1445, 1530
Fsp4HI	GCNGC	9 cut(s)	108, 257, 496, 579, 888, 1135, 1437, 1518, 1605
FspBI	CTAG	2 cut(s)	1157, 1533
GlaI	GCGC	6 cut(s)	115, 283, 385, 499, 1354, 1356
GluI	GCNGC	9 cut(s)	108, 257, 496, 579, 888, 1135, 1437, 1518, 1605
GsuI	CTGGAG	1 cut(s)	35
HaeII	RGCGCY	4 cut(s)	117, 285, 387, 501
HapII	CCGG	7 cut(s)	18, 67, 111, 411, 575, 1194, 1479
HgaI	GACGC	1 cut(s)	418
HhaI	GCGC	6 cut(s)	116, 284, 386, 500, 1355, 1357
Hin1I	GRCGYC	5 cut(s)	114, 282, 384, 498, 855
Hin6I	GCGC	6 cut(s)	114, 282, 384, 498, 1353, 1355
HinP1I	GCGC	6 cut(s)	114, 282, 384, 498, 1353, 1355
HinfI	GANTC	3 cut(s)	553, 932, 1197
HpaII	CCGG	7 cut(s)	18, 67, 111, 411, 575, 1194, 1479
HphI	GGTGA	7 cut(s)	319, 634, 778, 863, 1468, 1738, 1751
Hpy166II	GTNNAC	3 cut(s)	727, 936, 1489
Hpy188I	TCNGA	8 cut(s)	302, 600, 629, 696, 1104, 1207, 1387, 1691
Hpy188III	TCNNGA	6 cut(s)	143, 433, 616, 703, 841, 926
Hpy8I	GTNNAC	3 cut(s)	727, 936, 1489
Hpy99I	CGWCG	3 cut(s)	224, 488, 539
HpyAV	CCTTC	4 cut(s)	613, 1306, 1531, 1535
HpyCH4III	ACNGT	3 cut(s)	7, 157, 851
HpyCH4IV	ACGT	5 cut(s)	219, 425, 483, 855, 1467
HpyCH4V	TGCA	5 cut(s)	86, 378, 727, 1056, 1560
HpyF10VI	GCNNNNNNNGC	7 cut(s)	18, 113, 486, 495, 758, 1396, 1449
HpyF3I	CTNAG	4 cut(s)	191, 491, 1327, 1713
HpySE526I	ACGT	5 cut(s)	219, 425, 483, 855, 1467
Hsp92I	GRCGYC	5 cut(s)	114, 282, 384, 498, 855
HspAI	GCGC	6 cut(s)	114, 282, 384, 498, 1353, 1355
KasI	GGCGCC	4 cut(s)	113, 281, 383, 497
KroI	GCCGGC	1 cut(s)	110
KroNI	GCCGGC	1 cut(s)	112
Ksp22I	TGATCA	3 cut(s)	624, 699, 705
KspI	CCGCGG	1 cut(s)	942
Kzo9I	GATC	7 cut(s)	312, 612, 624, 699, 705, 768, 1775
LguI	GCTCTTC	2 cut(s)	1376, 1397
LmnI	GCTCC	3 cut(s)	218, 474, 749
Lsp1109I	GCAGC	4 cut(s)	94, 874, 1146, 1591
LweI	GCATC	2 cut(s)	234, 387
MaeI	CTAG	2 cut(s)	1157, 1533
MaeII	ACGT	5 cut(s)	219, 425, 483, 855, 1467
MaeIII	GTNAC	6 cut(s)	250, 325, 421, 851, 865, 1744
MalI	GATC	7 cut(s)	314, 614, 626, 701, 707, 770, 1777
MboI	GATC	7 cut(s)	312, 612, 624, 699, 705, 768, 1775
MboII	GAAGA	6 cut(s)	190, 289, 613, 763, 1363, 1384
MfeI	CAATTG	3 cut(s)	908, 1086, 1511
MlsI	TGGCCA	1 cut(s)	1755
MluNI	TGGCCA	1 cut(s)	1755
Mly113I	GGCGCC	4 cut(s)	114, 282, 384, 498
MlyI	GAGTC	1 cut(s)	941
MmeI	TCCRAC	2 cut(s)	240, 941
Mox20I	TGGCCA	1 cut(s)	1755
MroNI	GCCGGC	1 cut(s)	110
MscI	TGGCCA	1 cut(s)	1755
MseI	TTAA	3 cut(s)	95, 308, 1305
MslI	CAYNNNNRTG	6 cut(s)	122, 512, 620, 761, 794, 1031
Msp20I	TGGCCA	1 cut(s)	1755
MspA1I	CMGCKG	4 cut(s)	107, 495, 941, 1604
MspI	CCGG	7 cut(s)	18, 67, 111, 411, 575, 1194, 1479
MspR9I	CCNGG	3 cut(s)	18, 53, 1322
MunI	CAATTG	3 cut(s)	908, 1086, 1511
MvaI	CCWGG	2 cut(s)	53, 1322
MvnI	CGCG	3 cut(s)	941, 1355, 1439
MwoI	GCNNNNNNNGC	7 cut(s)	18, 113, 486, 495, 758, 1396, 1449
NaeI	GCCGGC	1 cut(s)	112
NarI	GGCGCC	4 cut(s)	114, 282, 384, 498
NciI	CCSGG	1 cut(s)	18
NcoI	CCATGG	1 cut(s)	762
NdeI	CATATG	2 cut(s)	1058, 1166
NdeII	GATC	7 cut(s)	312, 612, 624, 699, 705, 768, 1775
NgoMIV	GCCGGC	1 cut(s)	110
NlaIV	GGNNCC	9 cut(s)	16, 115, 214, 283, 385, 470, 499, 751, 945
NmeAIII	GCCGAG	1 cut(s)	141
NmuCI	GTSAC	6 cut(s)	250, 325, 421, 851, 865, 1744
NspI	RCATGY	4 cut(s)	90, 127, 664, 1036
PaeR7I	CTCGAG	1 cut(s)	839
PagI	TCATGA	2 cut(s)	615, 702
PauI	GCGCGC	1 cut(s)	1353
PciI	ACATGT	2 cut(s)	123, 660
PciSI	GCTCTTC	2 cut(s)	1376, 1397
PcsI	WCGNNNNNNNCGW	1 cut(s)	422
PdiI	GCCGGC	1 cut(s)	112
PfeI	GAWTC	2 cut(s)	553, 1197
PinAI	ACCGGT	1 cut(s)	1478
PkrI	GCNGC	9 cut(s)	109, 258, 497, 580, 889, 1136, 1438, 1519, 1606
PleI	GAGTC	1 cut(s)	940
PluTI	GGCGCC	4 cut(s)	117, 285, 387, 501
PmaCI	CACGTG	1 cut(s)	426
PmlI	CACGTG	1 cut(s)	426
PpsI	GAGTC	1 cut(s)	940
Ppu21I	YACGTR	1 cut(s)	426
PpuMI	RGGWCCY	1 cut(s)	55
PscI	ACATGT	2 cut(s)	123, 660
PsiI	TTATAA	1 cut(s)	1595
Psp124BI	GAGCTC	1 cut(s)	1392
Psp5II	RGGWCCY	1 cut(s)	55
Psp6I	CCWGG	2 cut(s)	51, 1320
PspCI	CACGTG	1 cut(s)	426
PspGI	CCWGG	2 cut(s)	51, 1320
PspN4I	GGNNCC	9 cut(s)	16, 115, 214, 283, 385, 470, 499, 751, 945
PspPI	GGNCC	4 cut(s)	14, 27, 55, 157
PspPPI	RGGWCCY	1 cut(s)	55
PteI	GCGCGC	1 cut(s)	1353
PvuII	CAGCTG	1 cut(s)	1604
RsaI	GTAC	8 cut(s)	668, 746, 815, 1144, 1406, 1421, 1457, 1490
RsaNI	GTAC	8 cut(s)	667, 745, 814, 1143, 1405, 1420, 1456, 1489
RseI	CAYNNNNRTG	6 cut(s)	122, 512, 620, 761, 794, 1031
SacI	GAGCTC	1 cut(s)	1392
SacII	CCGCGG	1 cut(s)	942
SapI	GCTCTTC	2 cut(s)	1376, 1397
SaqAI	TTAA	3 cut(s)	95, 308, 1305
SatI	GCNGC	9 cut(s)	108, 257, 496, 579, 888, 1135, 1437, 1518, 1605
Sau3AI	GATC	7 cut(s)	312, 612, 624, 699, 705, 768, 1775
Sau96I	GGNCC	4 cut(s)	14, 27, 55, 157
ScaI	AGTACT	2 cut(s)	1144, 1406
SchI	GAGTC	1 cut(s)	941
ScrFI	CCNGG	3 cut(s)	18, 53, 1322
SfaNI	GCATC	2 cut(s)	234, 387
SfoI	GGCGCC	4 cut(s)	115, 283, 385, 499
Sfr274I	CTCGAG	1 cut(s)	839
Sfr303I	CCGCGG	1 cut(s)	942
SgrBI	CCGCGG	1 cut(s)	942
SinI	GGWCC	3 cut(s)	14, 55, 157
SlaI	CTCGAG	1 cut(s)	839
SmiMI	CAYNNNNRTG	6 cut(s)	122, 512, 620, 761, 794, 1031
SmlI	CTYRAG	4 cut(s)	473, 735, 839, 1400
SmoI	CTYRAG	4 cut(s)	473, 735, 839, 1400
SspDI	GGCGCC	4 cut(s)	113, 281, 383, 497
SspMI	CTAG	2 cut(s)	1157, 1533
SstI	GAGCTC	1 cut(s)	1392
StyD4I	CCNGG	3 cut(s)	16, 51, 1320
StyI	CCWWGG	1 cut(s)	762
TaaI	ACNGT	3 cut(s)	7, 157, 851
TaiI	ACGT	5 cut(s)	222, 428, 486, 858, 1470
TaqI	TCGA	1 cut(s)	840
TaqII	GACCGA	1 cut(s)	1169
TatI	WGTACW	5 cut(s)	666, 813, 1142, 1404, 1419
TauI	GCSGC	5 cut(s)	259, 498, 581, 1439, 1520
TfiI	GAWTC	2 cut(s)	553, 1197
Tru1I	TTAA	3 cut(s)	95, 308, 1305
Tru9I	TTAA	3 cut(s)	95, 308, 1305
TscAI	CASTG	3 cut(s)	874, 1629, 1638
TseFI	GTSAC	6 cut(s)	250, 325, 421, 851, 865, 1744
TseI	GCWGC	4 cut(s)	107, 887, 1134, 1604
Tsp45I	GTSAC	6 cut(s)	250, 325, 421, 851, 865, 1744
TspDTI	ATGAA	4 cut(s)	64, 632, 933, 1036
TspGWI	ACGGA	2 cut(s)	313, 762
TspRI	CASTG	3 cut(s)	874, 1629, 1638
VneI	GTGCAC	1 cut(s)	725
VpaK11BI	GGWCC	3 cut(s)	14, 55, 157
XagI	CCTNNNNNAGG	1 cut(s)	245
XapI	RAATTY	2 cut(s)	1208, 1229
XceI	RCATGY	4 cut(s)	90, 127, 664, 1036
XcmI	CCANNNNNNNNNTGG	1 cut(s)	760
XhoI	CTCGAG	1 cut(s)	839
XspI	CTAG	2 cut(s)	1157, 1533
ZraI	GACGTC	1 cut(s)	856
ZrmI	AGTACT	2 cut(s)	1144, 1406

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.