Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0002588

Physical Location & Seq

Genomic Coordinates Reverse (-)

54523642 .. 54525417

Gene Structure 1776 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G027150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGACGGTTTCCCGTCCGGGCAGATGGGCCGACACCAAAGGCATGTCCCTCCAGGTCCTCAACGGCCGGTGGTTCATGGTCTTTGCATGTCTTTTAATCATGTCCGCTGCCGGCGCCACCTACATGTTCGGCCTCTACTCTCCCGACATCAAAAGTGTCCTCGGCTACGACCAAAGCACACTCAACCTCCTTAGCTTCTTCAAAGACTTGGGCTCCAACGTCGGCATCCTCTCCGGCCTCCTCAACGAGGTCACGCCTCCGTGGGTGGTCCTCGTGGTCGGCGCCGTCCTCAACTTCTTCGGATACTTAATGATCTGGCTCTCCGTCACCAAGAAAATCGCCAGACCAAAAGTCTGGCAGATGTGCCTCTACATTTGCATCGGCGCCAATTCCCAGTCGTTCGCCAACACCGGCTCGCTGGTCACGTGCGTCAAGAACTTCCCCGAGAGCCGCGGCGTCGTTTTGGGCCTCCTCAAGGGCTACGACACCAGATCCTTGATTTTGCTCATCGGGTGGCTTCCGGCGGCCATATCGTTCGCCTTTGTGAAGACTATTAGGATCATGAAGGTGATCAGACAAAGCAACGAGGTCAAGGTGTTCTACAACATGTTGTACATCTCTCTCGGGCTCGCTGGCTTTCTGATGATCATGATCATAATACAGAATAGGGTGCACTTCAGTCAAGGGGAGTACGGAGCCAGCACCGCCATGGTGCTCTTCTTGCTCGCCCTCCCCATCGTGGTGGTTGTAATTGAGGAGTACAAGATTTGGGAGAGCAAAAAACTCGAGATGAACGGTGACGTCAAAATAGTCACTGAAAAGCCCATCCCTGCTGCCGTCTCAACCGATAAACAATTAGTGGATGAAGCTCCTGAGTCCACCGCGGAACCTACCCAATCTTGTTGGAAAACTTGTTTTCAGCCACCAAATAGAGGGGAGGACTACACAATTCTCCAAGCTCTATTCAGCATTGACATGCTCATACTATTCATGGCGTGCATATGTGGTGTTGGGGGCACATTGACCGCAATTGACAATTTGGGTCAGATTGGGACTTCGTTGGGATATGCCACCCGCAGCAGGAGCACTTTCGTGTCCCTAGTCAGCATATGGAATTATCTCGGTCGAGTTGTTGCCGGATTCTACTCTGAATTCTTACTAAAACGATACAAATTCCCTCGTCCTCTCATTCTAACCCTAACCCTCTTGCTCTCTTGCGTTGGTCATCTACTCATTGCCTTCAATGTTAAAAATGGCCTCTACCTGGCCTCGGTCATAATAGGGTTTTGCTTCGGCGCGCAATGGCCTTTGCTCTTCGCCATAATCTCCGAGCTCTTCGGGCTCAAGTACTACTCAACCTTGTACAATTTCGGATCAGCCGCGAGCCCCGTCGGCTTGTACCTGCTCAACGTGAAACTCACCGGTCATGTGTACGATAAGGAGGCGAGGAAGCAATTGGCGGCTTCAGGGCTCACTAGGAAACACGGGGACGAGTTGGATTGCATTGGTGGAGAGTGCTTCAAGTTGTCCTTTATTATAATTGCAGCTGCTACATTTTTTGGGGCACTGAAGTTTTACCAGAGTGATATATACAAGAAGTTTAGAGAGGAGGCAGAAAAAAATGCTGAAACTGAAATGGCCGTGGGAGAAAATGGTGTCACCAATGGCCATCACCAAACCAATGAACGATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1 Nodulin-like

Protein Analysis

564

Amino Acids

62.45

Weight (kDa)

8.88

Isoelectric Point (pI)

35.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	20 - 158	5.1e-07	Major Facilitator Superfamily
Nodulin-like	PF06813	23 - 250	1.8e-76	Nodulin-like
NFD4_C	PF23262	321 - 523	6.1e-14	NFD4, C-terminal domain
MFS_1	PF07690	350 - 468	1.9e-06	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39210
fragaria_vesca	FvH4_6g16630 FvH4_7g18510
malus_domestica	MD01G1101400.v1.1 MD04G1090400.v1.1 MD07G1168000.v1.1
prunus_persica	Prupe.2G206600_v2.0.a1 Prupe.6G220200_v2.0.a1 Prupe.7G127100_v2.0.a1
pyrus_communis	pycom07g16250 pycom12g10870
rosa_chinensis	RchiOBHm_Chr1g0334871 RchiOBHm_Chr1g0362291 RchiOBHm_Chr3g0470591
rosa_laevigata	RLG00000024257 RLG00000027655 RLG00000029413
rosa_multiflora	Rmu_co8175752.1_g000001 Rmu_sc0000574.1_g000047 Rmu_sc0002115.1_g000014 Rmu_sc0007125.1_g000010 Rmu_ssc0000009.1_g000029
rosa_roxburghii	Rroxscaffold_4G00294280 Rroxscaffold_6G00410710
rosa_rugosa	Rorug01G0117400 Rorug01G0297200 Rorug03G0110100.1
rosa_samantha	Rh1AG306000 Rh1BG108600 Rh1BG269500 Rh1CG287000 Rh1DG145500 Rh1DG299600 Rh3AG160300 Rh3BG184800 Rh3CG175300 Rh3DG189900
rosa_wichuraiana	Rw1G011680 Rw1G027150 Rw3G015160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1538
AatII	GACGTC	1 cut(s)	804
Acc36I	ACCTGC	1 cut(s)	1410
AccB1I	GGYRCC	3 cut(s)	113, 281, 383
AccII	CGCG	4 cut(s)	453, 884, 1298, 1382
AclWI	GGATC	3 cut(s)	486, 566, 1381
AcoI	YGGCCR	4 cut(s)	64, 525, 1638, 1666
AcsI	RAATTY	2 cut(s)	1151, 1172
AcuI	CTGAAG	3 cut(s)	661, 1449, 1589
AcvI	CACGTG	1 cut(s)	426
AcyI	GRCGYC	5 cut(s)	114, 282, 384, 456, 801
AfaI	GTAC	7 cut(s)	614, 692, 761, 1349, 1364, 1400, 1433
AfiI	CCNNNNNNNGG	7 cut(s)	247, 475, 739, 932, 1080, 1264, 1270
AflIII	ACRYGT	2 cut(s)	123, 606
AgeI	ACCGGT	1 cut(s)	1421
AgsI	TTSAA	3 cut(s)	202, 1243, 1522
AhdI	GACNNNNNGTC	1 cut(s)	350
AjnI	CCWGG	2 cut(s)	51, 1263
AleI	CACNNNNGTG	1 cut(s)	1091
AluBI	AGCT	5 cut(s)	195, 869, 959, 1333, 1547
AluI	AGCT	5 cut(s)	195, 869, 959, 1333, 1547
Alw21I	GWGCWC	4 cut(s)	675, 717, 1088, 1335
Alw26I	GTCTC	1 cut(s)	844
Alw44I	GTGCAC	1 cut(s)	671
AlwI	GGATC	3 cut(s)	486, 566, 1381
Ama87I	CYCGRG	3 cut(s)	443, 623, 785
ApaLI	GTGCAC	1 cut(s)	671
ApeKI	GCWGC	5 cut(s)	107, 833, 1077, 1544, 1547
ApoI	RAATTY	2 cut(s)	1151, 1172
AsiGI	ACCGGT	1 cut(s)	1421
AspLEI	GCGC	5 cut(s)	116, 284, 386, 1298, 1300
AspS9I	GGNCC	4 cut(s)	27, 55, 268, 466
AsuC2I	CCSGG	1 cut(s)	18
AsuHPI	GGTGA	6 cut(s)	319, 580, 809, 1411, 1651, 1664
AvaI	CYCGRG	3 cut(s)	443, 623, 785
AvaII	GGWCC	2 cut(s)	55, 268
BaeGI	GKGCMC	3 cut(s)	675, 1019, 1567
BalI	TGGCCA	1 cut(s)	1668
BanI	GGYRCC	3 cut(s)	113, 281, 383
BanII	GRGCYC	6 cut(s)	215, 630, 1335, 1344, 1388, 1473
BauI	CACGAG	1 cut(s)	272
BbrPI	CACGTG	1 cut(s)	426
BbsI	GAAGAC	1 cut(s)	554
Bbv12I	GWGCWC	4 cut(s)	675, 717, 1088, 1335
BbvI	GCAGC	5 cut(s)	94, 820, 1089, 1534, 1556
BccI	CCATC	4 cut(s)	18, 743, 833, 1677
BceAI	ACGGC	4 cut(s)	79, 269, 821, 1625
BcgI	CGANNNNNNTGC	2 cut(s)	766, 800
BciT130I	CCWGG	2 cut(s)	53, 1265
BciVI	GTATCC	1 cut(s)	296
BclI	TGATCA	3 cut(s)	570, 645, 651
BcnI	CCSGG	1 cut(s)	18
BcoDI	GTCTC	1 cut(s)	844
BfaI	CTAG	2 cut(s)	1100, 1476
BfoI	RGCGCY	3 cut(s)	117, 285, 387
BfuAI	ACCTGC	1 cut(s)	1410
BfuI	GTATCC	1 cut(s)	296
BglI	GCCNNNNNGGC	1 cut(s)	1392
BmcAI	AGTACT	1 cut(s)	1349
Bme1390I	CCNGG	3 cut(s)	18, 53, 1265
Bme18I	GGWCC	2 cut(s)	55, 268
BmeRI	GACNNNNNGTC	1 cut(s)	350
BmeT110I	CYCGRG	3 cut(s)	443, 623, 785
BmgT120I	GGNCC	4 cut(s)	27, 55, 268, 466
BmiI	GGNNCC	6 cut(s)	115, 214, 283, 385, 697, 888
BmrFI	CCNGG	3 cut(s)	18, 53, 1265
BmrI	ACTGGG	1 cut(s)	388
BmsI	GCATC	2 cut(s)	234, 387
BmuI	ACTGGG	1 cut(s)	388
BpiI	GAAGAC	1 cut(s)	554
BpmI	CTGGAG	1 cut(s)	35
Bpu10I	CCTNAGC	1 cut(s)	191
BpuEI	CTTGAG	2 cut(s)	458, 1328
BpuMI	CCSGG	1 cut(s)	18
BsaAI	YACGTR	1 cut(s)	426
BsaBI	GATNNNNATC	1 cut(s)	650
BsaHI	GRCGYC	5 cut(s)	114, 282, 384, 456, 801
BsaJI	CCNNGG	7 cut(s)	160, 260, 451, 708, 882, 1269, 1641
BsaWI	WCCGGW	1 cut(s)	1421
BsaXI	ACNNNNNCTCC	4 cut(s)	171, 197, 201, 227
Bsc4I	CCNNNNNNNGG	7 cut(s)	247, 475, 739, 932, 1080, 1264, 1270
Bse118I	RCCGGY	4 cut(s)	66, 110, 410, 1421
Bse1I	ACTGG	1 cut(s)	394
Bse3DI	GCAATG	2 cut(s)	1233, 1307
Bse8I	GATNNNNATC	1 cut(s)	650
BseBI	CCWGG	2 cut(s)	53, 1265
BseDI	CCNNGG	7 cut(s)	160, 260, 451, 708, 882, 1269, 1641
BseGI	GGATG	3 cut(s)	225, 825, 868
BseJI	GATNNNNATC	1 cut(s)	650
BseLI	CCNNNNNNNGG	7 cut(s)	247, 475, 739, 932, 1080, 1264, 1270
BseMI	GCAATG	2 cut(s)	1233, 1307
BseMII	CTCAG	1 cut(s)	864
BseNI	ACTGG	1 cut(s)	394
BsePI	GCGCGC	1 cut(s)	1296
BseRI	GAGGAG	4 cut(s)	230, 461, 770, 1622
BseSI	GKGCMC	3 cut(s)	675, 1019, 1567
BseX3I	CGGCCG	1 cut(s)	64
BseXI	GCAGC	5 cut(s)	94, 820, 1089, 1534, 1556
Bsh1236I	CGCG	4 cut(s)	453, 884, 1298, 1382
Bsh1285I	CGRYCG	2 cut(s)	67, 1126
BshNI	GGYRCC	3 cut(s)	113, 281, 383
BshTI	ACCGGT	1 cut(s)	1421
BsiEI	CGRYCG	2 cut(s)	67, 1126
BsiHKAI	GWGCWC	4 cut(s)	675, 717, 1088, 1335
BsiHKCI	CYCGRG	3 cut(s)	443, 623, 785
BsiSI	CCGG	8 cut(s)	17, 67, 111, 234, 411, 521, 1137, 1422
BslFI	GGGAC	4 cut(s)	31, 1066, 1081, 1502
BslI	CCNNNNNNNGG	7 cut(s)	247, 475, 739, 932, 1080, 1264, 1270
BsmAI	GTCTC	1 cut(s)	844
BsmBI	CGTCTC	1 cut(s)	844
BsmFI	GGGAC	4 cut(s)	31, 1066, 1081, 1502
BsoBI	CYCGRG	3 cut(s)	443, 623, 785
Bsp1407I	TGTACA	2 cut(s)	612, 1362
Bsp143I	GATC	8 cut(s)	312, 491, 558, 570, 645, 651, 1373, 1688
Bsp19I	CCATGG	1 cut(s)	708
BspCNI	CTCAG	1 cut(s)	865
BspFNI	CGCG	4 cut(s)	453, 884, 1298, 1382
BspHI	TCATGA	2 cut(s)	561, 648
BspLI	GGNNCC	6 cut(s)	115, 214, 283, 385, 697, 888
BspMI	ACCTGC	1 cut(s)	1410
BspPI	GGATC	3 cut(s)	486, 566, 1381
BspQI	GCTCTTC	3 cut(s)	722, 1319, 1340
BspT107I	GGYRCC	3 cut(s)	113, 281, 383
BsrDI	GCAATG	2 cut(s)	1233, 1307
BsrFI	RCCGGY	4 cut(s)	66, 110, 410, 1421
BsrGI	TGTACA	2 cut(s)	612, 1362
BsrI	ACTGG	1 cut(s)	394
BssAI	RCCGGY	4 cut(s)	66, 110, 410, 1421
BssECI	CCNNGG	7 cut(s)	160, 260, 451, 708, 882, 1269, 1641
BssHII	GCGCGC	1 cut(s)	1296
BssMI	GATC	8 cut(s)	312, 491, 558, 570, 645, 651, 1373, 1688
BssNI	GRCGYC	5 cut(s)	114, 282, 384, 456, 801
BssSI	CACGAG	1 cut(s)	272
BssT1I	CCWWGG	1 cut(s)	708
Bst2BI	CACGAG	1 cut(s)	272
Bst2UI	CCWGG	2 cut(s)	53, 1265
Bst4CI	ACNGT	2 cut(s)	7, 797
Bst6I	CTCTTC	3 cut(s)	722, 1319, 1340
BstACI	GRCGYC	5 cut(s)	114, 282, 384, 456, 801
BstAUI	TGTACA	2 cut(s)	612, 1362
BstBAI	YACGTR	1 cut(s)	426
BstC8I	GCNNGC	9 cut(s)	112, 416, 630, 634, 700, 726, 997, 1298, 1384
BstDEI	CTNAG	2 cut(s)	191, 873
BstDSI	CCRYGG	5 cut(s)	260, 451, 708, 882, 1641
BstENI	CCTNNNNNAGG	2 cut(s)	245, 473
BstF5I	GGATG	3 cut(s)	225, 825, 868
BstFNI	CGCG	4 cut(s)	453, 884, 1298, 1382
BstH2I	RGCGCY	3 cut(s)	117, 285, 387
BstHHI	GCGC	5 cut(s)	116, 284, 386, 1298, 1300
BstKTI	GATC	8 cut(s)	315, 494, 561, 573, 648, 654, 1376, 1691
BstMAI	GTCTC	1 cut(s)	844
BstMBI	GATC	8 cut(s)	312, 491, 558, 570, 645, 651, 1373, 1688
BstMCI	CGRYCG	2 cut(s)	67, 1126
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 704, 721, 1083, 1339, 1392
BstNI	CCWGG	2 cut(s)	53, 1265
BstNSI	RCATGY	5 cut(s)	46, 90, 127, 610, 979
BstSCI	CCNGG	3 cut(s)	16, 51, 1263
BstSLI	GKGCMC	3 cut(s)	675, 1019, 1567
BstUI	CGCG	4 cut(s)	453, 884, 1298, 1382
BstV1I	GCAGC	5 cut(s)	94, 820, 1089, 1534, 1556
BstV2I	GAAGAC	1 cut(s)	554
BstX2I	RGATCY	1 cut(s)	491
BstXI	CCANNNNNNTGG	2 cut(s)	354, 742
BstYI	RGATCY	1 cut(s)	491
BstZI	CGGCCG	1 cut(s)	64
BsuI	GTATCC	1 cut(s)	296
BtgI	CCRYGG	5 cut(s)	260, 451, 708, 882, 1641
BtsCI	GGATG	3 cut(s)	225, 825, 868
BtsIMutI	CAGTG	2 cut(s)	813, 1565
BveI	ACCTGC	1 cut(s)	1410
Cac8I	GCNNGC	9 cut(s)	112, 416, 630, 634, 700, 726, 997, 1298, 1384
CciI	TCATGA	2 cut(s)	561, 648
CfoI	GCGC	5 cut(s)	116, 284, 386, 1298, 1300
Cfr10I	RCCGGY	4 cut(s)	66, 110, 410, 1421
Cfr13I	GGNCC	4 cut(s)	27, 55, 268, 466
Cfr42I	CCGCGG	2 cut(s)	454, 885
CseI	GACGC	2 cut(s)	418, 445
Csp6I	GTAC	7 cut(s)	613, 691, 760, 1348, 1363, 1399, 1432
CspAI	ACCGGT	1 cut(s)	1421
CviQI	GTAC	7 cut(s)	613, 691, 760, 1348, 1363, 1399, 1432
DdeI	CTNAG	2 cut(s)	191, 873
DinI	GGCGCC	3 cut(s)	115, 283, 385
DpnI	GATC	8 cut(s)	314, 493, 560, 572, 647, 653, 1375, 1690
DpnII	GATC	8 cut(s)	312, 491, 558, 570, 645, 651, 1373, 1688
DriI	GACNNNNNGTC	1 cut(s)	350
EaeI	YGGCCR	4 cut(s)	64, 525, 1638, 1666
EagI	CGGCCG	1 cut(s)	64
Eam1104I	CTCTTC	3 cut(s)	722, 1319, 1340
Eam1105I	GACNNNNNGTC	1 cut(s)	350
EarI	CTCTTC	3 cut(s)	722, 1319, 1340
Ecl136II	GAGCTC	1 cut(s)	1333
EclXI	CGGCCG	1 cut(s)	64
Eco130I	CCWWGG	1 cut(s)	708
Eco24I	GRGCYC	6 cut(s)	215, 630, 1335, 1344, 1388, 1473
Eco47I	GGWCC	2 cut(s)	55, 268
Eco52I	CGGCCG	1 cut(s)	64
Eco53kI	GAGCTC	1 cut(s)	1333
Eco57I	CTGAAG	3 cut(s)	661, 1449, 1589
Eco72I	CACGTG	1 cut(s)	426
Eco88I	CYCGRG	3 cut(s)	443, 623, 785
EcoICRI	GAGCTC	1 cut(s)	1333
EcoNI	CCTNNNNNAGG	2 cut(s)	245, 473
EcoO109I	RGGNCCY	1 cut(s)	55
EcoRI	GAATTC	1 cut(s)	1151
EcoRII	CCWGG	2 cut(s)	51, 1263
EcoT14I	CCWWGG	1 cut(s)	708
EcoT38I	GRGCYC	6 cut(s)	215, 630, 1335, 1344, 1388, 1473
EgeI	GGCGCC	3 cut(s)	115, 283, 385
EheI	GGCGCC	3 cut(s)	115, 283, 385
ErhI	CCWWGG	1 cut(s)	708
Esp3I	CGTCTC	1 cut(s)	844
FalI	AAGNNNNNCTT	2 cut(s)	1514, 1546
FaqI	GGGAC	4 cut(s)	31, 1066, 1081, 1502
FauI	CCCGC	1 cut(s)	1082
FauNDI	CATATG	2 cut(s)	1001, 1109
FbaI	TGATCA	3 cut(s)	570, 645, 651
FokI	GGATG	3 cut(s)	212, 812, 875
FriOI	GRGCYC	6 cut(s)	215, 630, 1335, 1344, 1388, 1473
FspBI	CTAG	2 cut(s)	1100, 1476
GlaI	GCGC	5 cut(s)	115, 283, 385, 1297, 1299
GsuI	CTGGAG	1 cut(s)	35
HaeII	RGCGCY	3 cut(s)	117, 285, 387
HapII	CCGG	8 cut(s)	17, 67, 111, 234, 411, 521, 1137, 1422
HgaI	GACGC	2 cut(s)	418, 445
HhaI	GCGC	5 cut(s)	116, 284, 386, 1298, 1300
Hin1I	GRCGYC	5 cut(s)	114, 282, 384, 456, 801
Hin6I	GCGC	5 cut(s)	114, 282, 384, 1296, 1298
HinP1I	GCGC	5 cut(s)	114, 282, 384, 1296, 1298
HinfI	GANTC	2 cut(s)	875, 1140
HpaII	CCGG	8 cut(s)	17, 67, 111, 234, 411, 521, 1137, 1422
HphI	GGTGA	6 cut(s)	319, 580, 809, 1411, 1651, 1664
Hpy166II	GTNNAC	3 cut(s)	673, 879, 1432
Hpy188I	TCNGA	7 cut(s)	302, 575, 642, 1047, 1150, 1330, 1373
Hpy188III	TCNNGA	6 cut(s)	143, 433, 562, 649, 787, 872
Hpy8I	GTNNAC	3 cut(s)	673, 879, 1432
Hpy99I	CGWCG	3 cut(s)	224, 461, 1394
HpyAV	CCTTC	2 cut(s)	559, 1249
HpyCH4III	ACNGT	2 cut(s)	7, 797
HpyCH4IV	ACGT	4 cut(s)	219, 425, 801, 1410
HpyCH4V	TGCA	6 cut(s)	86, 378, 673, 999, 1503, 1544
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 704, 721, 1083, 1339, 1392
HpyF3I	CTNAG	2 cut(s)	191, 873
HpySE526I	ACGT	4 cut(s)	219, 425, 801, 1410
Hsp92I	GRCGYC	5 cut(s)	114, 282, 384, 456, 801
HspAI	GCGC	5 cut(s)	114, 282, 384, 1296, 1298
KasI	GGCGCC	3 cut(s)	113, 281, 383
KroI	GCCGGC	1 cut(s)	110
KroNI	GCCGGC	1 cut(s)	112
Ksp22I	TGATCA	3 cut(s)	570, 645, 651
KspI	CCGCGG	2 cut(s)	454, 885
Kzo9I	GATC	8 cut(s)	312, 491, 558, 570, 645, 651, 1373, 1688
LguI	GCTCTTC	3 cut(s)	722, 1319, 1340
LmnI	GCTCC	4 cut(s)	218, 695, 874, 1083
Lsp1109I	GCAGC	5 cut(s)	94, 820, 1089, 1534, 1556
LweI	GCATC	2 cut(s)	234, 387
MaeI	CTAG	2 cut(s)	1100, 1476
MaeII	ACGT	4 cut(s)	219, 425, 801, 1410
MaeIII	GTNAC	6 cut(s)	250, 325, 421, 797, 811, 1657
MalI	GATC	8 cut(s)	314, 493, 560, 572, 647, 653, 1375, 1690
MboI	GATC	8 cut(s)	312, 491, 558, 570, 645, 651, 1373, 1688
MboII	GAAGA	6 cut(s)	190, 289, 559, 709, 1306, 1327
MfeI	CAATTG	2 cut(s)	1029, 1454
MflI	RGATCY	1 cut(s)	491
MlsI	TGGCCA	1 cut(s)	1668
MluNI	TGGCCA	1 cut(s)	1668
Mly113I	GGCGCC	3 cut(s)	114, 282, 384
MlyI	GAGTC	1 cut(s)	884
MmeI	TCCRAC	3 cut(s)	240, 884, 1476
Mox20I	TGGCCA	1 cut(s)	1668
MroNI	GCCGGC	1 cut(s)	110
MscI	TGGCCA	1 cut(s)	1668
MseI	TTAA	3 cut(s)	95, 308, 1248
MslI	CAYNNNNRTG	6 cut(s)	122, 566, 707, 740, 974, 1091
Msp20I	TGGCCA	1 cut(s)	1668
MspA1I	CMGCKG	4 cut(s)	107, 453, 884, 1547
MspI	CCGG	8 cut(s)	17, 67, 111, 234, 411, 521, 1137, 1422
MspR9I	CCNGG	3 cut(s)	18, 53, 1265
MunI	CAATTG	2 cut(s)	1029, 1454
MvaI	CCWGG	2 cut(s)	53, 1265
MvnI	CGCG	4 cut(s)	453, 884, 1298, 1382
MwoI	GCNNNNNNNGC	6 cut(s)	113, 704, 721, 1083, 1339, 1392
NaeI	GCCGGC	1 cut(s)	112
NarI	GGCGCC	3 cut(s)	114, 282, 384
NciI	CCSGG	1 cut(s)	18
NcoI	CCATGG	1 cut(s)	708
NdeI	CATATG	2 cut(s)	1001, 1109
NdeII	GATC	8 cut(s)	312, 491, 558, 570, 645, 651, 1373, 1688
NgoMIV	GCCGGC	1 cut(s)	110
NlaIV	GGNNCC	6 cut(s)	115, 214, 283, 385, 697, 888
NmeAIII	GCCGAG	1 cut(s)	141
NmuCI	GTSAC	6 cut(s)	250, 325, 421, 797, 811, 1657
NspI	RCATGY	5 cut(s)	46, 90, 127, 610, 979
OliI	CACNNNNGTG	1 cut(s)	1091
PaeR7I	CTCGAG	1 cut(s)	785
PagI	TCATGA	2 cut(s)	561, 648
PauI	GCGCGC	1 cut(s)	1296
PciI	ACATGT	2 cut(s)	123, 606
PciSI	GCTCTTC	3 cut(s)	722, 1319, 1340
PcsI	WCGNNNNNNNCGW	1 cut(s)	422
PdiI	GCCGGC	1 cut(s)	112
PfeI	GAWTC	1 cut(s)	1140
PinAI	ACCGGT	1 cut(s)	1421
PleI	GAGTC	1 cut(s)	883
PluTI	GGCGCC	3 cut(s)	117, 285, 387
PmaCI	CACGTG	1 cut(s)	426
PmlI	CACGTG	1 cut(s)	426
PpsI	GAGTC	1 cut(s)	883
Ppu21I	YACGTR	1 cut(s)	426
PpuMI	RGGWCCY	1 cut(s)	55
PscI	ACATGT	2 cut(s)	123, 606
PsiI	TTATAA	1 cut(s)	1538
Psp124BI	GAGCTC	1 cut(s)	1335
Psp5II	RGGWCCY	1 cut(s)	55
Psp6I	CCWGG	2 cut(s)	51, 1263
PspCI	CACGTG	1 cut(s)	426
PspGI	CCWGG	2 cut(s)	51, 1263
PspN4I	GGNNCC	6 cut(s)	115, 214, 283, 385, 697, 888
PspPI	GGNCC	4 cut(s)	27, 55, 268, 466
PspPPI	RGGWCCY	1 cut(s)	55
PsuI	RGATCY	1 cut(s)	491
PteI	GCGCGC	1 cut(s)	1296
PvuII	CAGCTG	1 cut(s)	1547
RsaI	GTAC	7 cut(s)	614, 692, 761, 1349, 1364, 1400, 1433
RsaNI	GTAC	7 cut(s)	613, 691, 760, 1348, 1363, 1399, 1432
RseI	CAYNNNNRTG	6 cut(s)	122, 566, 707, 740, 974, 1091
SacI	GAGCTC	1 cut(s)	1335
SacII	CCGCGG	2 cut(s)	454, 885
SapI	GCTCTTC	3 cut(s)	722, 1319, 1340
SaqAI	TTAA	3 cut(s)	95, 308, 1248
Sau3AI	GATC	8 cut(s)	312, 491, 558, 570, 645, 651, 1373, 1688
Sau96I	GGNCC	4 cut(s)	27, 55, 268, 466
ScaI	AGTACT	1 cut(s)	1349
SchI	GAGTC	1 cut(s)	884
ScrFI	CCNGG	3 cut(s)	18, 53, 1265
SfaNI	GCATC	2 cut(s)	234, 387
SfoI	GGCGCC	3 cut(s)	115, 283, 385
Sfr274I	CTCGAG	1 cut(s)	785
Sfr303I	CCGCGG	2 cut(s)	454, 885
SgrBI	CCGCGG	2 cut(s)	454, 885
SinI	GGWCC	2 cut(s)	55, 268
SlaI	CTCGAG	1 cut(s)	785
SmiMI	CAYNNNNRTG	6 cut(s)	122, 566, 707, 740, 974, 1091
SmlI	CTYRAG	3 cut(s)	473, 785, 1343
SmoI	CTYRAG	3 cut(s)	473, 785, 1343
SspDI	GGCGCC	3 cut(s)	113, 281, 383
SspMI	CTAG	2 cut(s)	1100, 1476
SstI	GAGCTC	1 cut(s)	1335
StyD4I	CCNGG	3 cut(s)	16, 51, 1263
StyI	CCWWGG	1 cut(s)	708
TaaI	ACNGT	2 cut(s)	7, 797
TaiI	ACGT	4 cut(s)	222, 428, 804, 1413
TaqI	TCGA	2 cut(s)	786, 1126
TaqII	GACCGA	2 cut(s)	1112, 1261
TatI	WGTACW	4 cut(s)	612, 759, 1347, 1362
TauI	GCSGC	5 cut(s)	453, 456, 527, 1382, 1463
TfiI	GAWTC	1 cut(s)	1140
Tru1I	TTAA	3 cut(s)	95, 308, 1248
Tru9I	TTAA	3 cut(s)	95, 308, 1248
TscAI	CASTG	2 cut(s)	820, 1572
TseFI	GTSAC	6 cut(s)	250, 325, 421, 797, 811, 1657
TseI	GCWGC	5 cut(s)	107, 833, 1077, 1544, 1547
Tsp45I	GTSAC	6 cut(s)	250, 325, 421, 797, 811, 1657
TspDTI	ATGAA	5 cut(s)	64, 578, 806, 879, 979
TspGWI	ACGGA	3 cut(s)	249, 313, 708
TspRI	CASTG	2 cut(s)	820, 1572
VneI	GTGCAC	1 cut(s)	671
VpaK11BI	GGWCC	2 cut(s)	55, 268
XagI	CCTNNNNNAGG	2 cut(s)	245, 473
XapI	RAATTY	2 cut(s)	1151, 1172
XceI	RCATGY	5 cut(s)	46, 90, 127, 610, 979
XcmI	CCANNNNNNNNNTGG	1 cut(s)	706
XhoI	CTCGAG	1 cut(s)	785
XspI	CTAG	2 cut(s)	1100, 1476
ZraI	GACGTC	1 cut(s)	802
ZrmI	AGTACT	1 cut(s)	1349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.