Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003620

Physical Location & Seq

Genomic Coordinates Forward (+)

17490271 .. 17493922

Gene Structure 3652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G41900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGTGCTGTGGATCAGACCGATTAAACCAGATCGTGTCATCAAGATCTTCGTTGCCAATTTCTTTCGAGGAAGATAACAATCTTGTTACCAACACAGACATGAATCACTTAACAGTCGAAACAGAGGATACGTTTGCGAGCTTGCTTGAGCTTGCAGCTAACAACGATGTTGAAGGTGTAAGGCTATCTATCGAGAGAGACCCTTCTTGTGTAGACGAAGCTGGTCTCTGGTACGGTCGTCAAAAAGGTTCTAAAGCTATGGTCAACGATTACAGGACTCCGTTGATGGTTGCTGCTACTTACGGAAGCATTGATGTGATCAAGCTTATTGTTTCTTTGACTGATGCTGACGTGAACCGTGCTTGCGGGAATGATCAGACCACTGCGTTACACTGCGCTGCTTCTGGAGGAGCTGTGAATGCTATCCAAGTTGTTAAGCTGCTTCTTGCAGCTGGAGCTGATTTGAATCTGTTGGATGCTGAAGGTCAACGAGCTGGTGATGTTATTGTTGTTCCTCCTAAGCTTGAAGGCGTGAAGCTGATGCTTCAGGAGCTTCTTTCTGCTGATGGATCATCTACTGCGGAGCGGAATCTACGGGTTGTGACAAATGTTCCGAATAGAAGCTCATCTCCGTGTCATTCTCCTACTGGAGAGAATGGTGGATCAGGGTCTGGTTCACCGCTCGGCTCTCCTTTTAAGCTGAAATCTACTGAATTCAAGAAAGAGTATCCGGTTGATCCGTCTTTGCCAGATATCAAGAACAGTATCTACGCGACTGATGAGTTTAGAATGTATTCCTTCAAGGTCCGGCCTTGCTCTCGTGCTTATTCACATGATTGGACTGAGTGTCCTTTTGTTCACCCGGGTGAAAACGCGAGGAGGAGAGACCCGAGGAAGTTCCATTACAGCTGCGTTCCTTGCCCGGATTTTAGGAAAGGAGCTTGTAGGAGAGGAGATATGTGTGAGTATGCGCACGGTGTGTTTGAATGCTGGCTTCATCCGGCTCAGTACAGGACCCGTCTTTGCAAAGATGGAACAGGCTGTGCTCGGCGGGTTTGTTTCTTTGCGCATACACCCGAGGAGCTTCGACCTTTGTACGCATCAACTGGTTCAGCGGTTCCTTCGCCTAGATCGAATGCTGATTATGCAGCTGCTTTGAGTCTCCTTCCTGGTTCTCCATCAGGAGTCTCTGTCATGTCCCCGCTTTCCCCATCAGCAGCGGGGAACGGAATGTCTCATTCGAATATGGCTTGGCCACAACCAAATGTCCCTGCGTTGCACTTACCAGGAAGCAATCTACAGTCAAGCAGGCTAAGGTCTTCTCTCAATGCAAGGGATATCCCGACGGATGAGTTCAATATGTTAGCGGATTACGAGCAGCAGCAACTCCTCAACGAGTATTCCAATGCTCTGAGCCGTTCTGGTCGGATGAAATCAATGCCTCCTTCGAATCTTGAAGATCTTTTCTCAGCAGAAGGCTCTTCATCTCCCCGGTTCACTGATTCCGCTTTAGCTTCCGCGGTGTTCTCGCCTACACACAAGTCAGCTGTCTTCAACCAGTTCCAACAACAGCAACAGCAGCAGCAGAGCATGTTGTCTCCAATCAACACAAGCTTTTCTTCACCAAAGAGCGTTGACCACTCATTGTTTTCAGGTGGAGGAAGAATGTCTCCTCGGAATGTTGTTGAACCAATATCACCCATGAGTGCTCGGGTTTCCATGTTGGCTCAGTGCGTGAAGCAACAACAACAGCAACAGCAGCAGCAGCAGCAGCAACATCAGTTCCGTAGCCTTAGCTCCAGAGAGCTCAGAACAAACTCTAGCCCAATCGTTGGTTCACCGGTAAACAACAACACATGGTCATCAAAATGGGGATCTTCAAATGGTCAACCGGATTGGGGAATGAGCTCAGAAGCACTTGGTAAGTTGAGATCTTCGTCATCGTTTGATGGTGATGAGCCTGATGTGTCATGGGTCCAGTCACTGGTGAAGGAGACTCCAGCAGAAGCCAAAGAGAAAGCAGCAACATCTTCCTCAGGGGAACACGTGATGAAGCAGCCAAATCCGGTTGAACCGGTAATGGATCATGCTGGGCTAGAAGCTTGGATTGAGCAAATGCAGCTCGATCAGCTTGTGGCTCAGCAGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 zf-CCCH

Protein Analysis

716

Amino Acids

77.99

Weight (kDa)

5.94

Isoelectric Point (pI)

59.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	57 - 158	3.2e-11	Ankyrin repeats (3 copies)
Ank_4	PF13637	95 - 143	2.2e-06	Ankyrin repeats (many copies)
zf-CCCH_AtC3H23	PF25512	261 - 294	5.8e-21	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003620)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41900
fragaria_vesca	FvH4_7g01060
malus_domestica	MD03G1175400.v1.1 MD12G1068100.v1.1 MD14G1068200.v1.1
prunus_persica	Prupe.4G248900_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1
pyrus_communis	pycom03g13290 pycom11g16880 pycom12g06010
rosa_chinensis	RchiOBHm_Chr1g0316051 RchiOBHm_Chr3g0481371
rosa_laevigata	RLG00000023402 RLG00000030707
rosa_multiflora	Rmu_sc0000064.1_g000020 Rmu_sc0002014.1_g000008 Rmu_sc0002531.1_g000041
rosa_roxburghii	Rroxscaffold_6G00400470
rosa_rugosa	Rorug01G0008400 Rorug01G0008400 Rorug01G0008500 Rorug03G0191500 Rorug03G0191600
rosa_samantha	Rh1AG018800 Rh1BG012300 Rh1CG016100 Rh1DG012500 Rh3AG242500 Rh3BG277500 Rh3CG272500 Rh3DG269400
rosa_wichuraiana	Rw1G001200 Rw3G021670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	972, 1068
AccB7I	CCANNNNNTGG	2 cut(s)	1832, 1984
AccBSI	CCGCTC	2 cut(s)	586, 682
AccI	GTMKAC	1 cut(s)	213
AccII	CGCG	3 cut(s)	773, 875, 1520
AclWI	GGATC	6 cut(s)	19, 577, 670, 731, 1882, 2091
AcoI	YGGCCR	1 cut(s)	1253
AcsI	RAATTY	1 cut(s)	713
AcuI	CTGAAG	2 cut(s)	501, 530
AcvI	CACGTG	1 cut(s)	2047
AdeI	CACNNNGTG	1 cut(s)	979
AfaI	GTAC	3 cut(s)	233, 1010, 1097
AfiI	CCNNNNNNNGG	3 cut(s)	1832, 1898, 1984
AflIII	ACRYGT	1 cut(s)	2044
AgeI	ACCGGT	2 cut(s)	1840, 2074
AhdI	GACNNNNNGTC	1 cut(s)	846
AjiI	CACGTC	1 cut(s)	352
AjnI	CCWGG	2 cut(s)	1168, 1285
AjuI	GAANNNNNNNTTGG	2 cut(s)	1819, 1851
AleI	CACNNNNGTG	1 cut(s)	864
Alw21I	GWGCWC	4 cut(s)	1048, 1711, 1809, 1910
Alw26I	GTCTC	9 cut(s)	192, 230, 879, 1166, 1192, 1239, 1602, 1674, 1988
AlwI	GGATC	6 cut(s)	19, 577, 670, 731, 1882, 2091
AlwNI	CAGNNNCTG	2 cut(s)	671, 1984
Ama87I	CYCGRG	4 cut(s)	862, 889, 1076, 1710
AoxI	GGCC	2 cut(s)	809, 1253
ApoI	RAATTY	1 cut(s)	713
AsiGI	ACCGGT	2 cut(s)	1840, 2074
Asp700I	GAANNNNTTC	1 cut(s)	793
AspLEI	GCGC	3 cut(s)	398, 973, 1069
AspS9I	GGNCC	3 cut(s)	805, 1014, 1975
AsuC2I	CCSGG	4 cut(s)	863, 864, 923, 1492
AsuHPI	GGTGA	9 cut(s)	509, 669, 851, 878, 1614, 1689, 1830, 1964, 1999
AsuII	TTCGAA	2 cut(s)	1241, 1448
AvaI	CYCGRG	4 cut(s)	862, 889, 1076, 1710
AvaII	GGWCC	3 cut(s)	805, 1014, 1975
AxyI	CCTNAGG	1 cut(s)	2035
BaeI	ACNNNNGTAYC	2 cut(s)	223, 256
BalI	TGGCCA	1 cut(s)	1255
BanII	GRGCYC	2 cut(s)	1809, 1910
BarI	GAAGNNNNNNTAC	2 cut(s)	887, 919
BauI	CACGAG	1 cut(s)	819
BbrPI	CACGTG	1 cut(s)	2047
BbsI	GAAGAC	2 cut(s)	1311, 1543
Bbv12I	GWGCWC	4 cut(s)	1048, 1711, 1809, 1910
BccI	CCATC	6 cut(s)	280, 560, 1025, 1186, 1219, 1943
BceAI	ACGGC	1 cut(s)	1401
BciT130I	CCWGG	2 cut(s)	1170, 1287
BciVI	GTATCC	2 cut(s)	121, 738
BclI	TGATCA	2 cut(s)	318, 373
BcnI	CCSGG	4 cut(s)	863, 864, 923, 1492
BcoDI	GTCTC	9 cut(s)	192, 230, 879, 1166, 1192, 1239, 1602, 1674, 1988
BfaI	CTAG	3 cut(s)	1128, 1821, 2096
BfmI	CTRYAG	1 cut(s)	1298
BfuI	GTATCC	2 cut(s)	121, 738
BglII	AGATCT	3 cut(s)	44, 1459, 1931
BlpI	GCTNAGC	1 cut(s)	2139
Bme1390I	CCNGG	6 cut(s)	863, 864, 923, 1170, 1287, 1492
Bme18I	GGWCC	3 cut(s)	805, 1014, 1975
BmeRI	GACNNNNNGTC	1 cut(s)	846
BmeT110I	CYCGRG	4 cut(s)	862, 889, 1076, 1710
BmgBI	CACGTC	1 cut(s)	352
BmgT120I	GGNCC	3 cut(s)	805, 1014, 1975
BmiI	GGNNCC	3 cut(s)	1016, 1119, 1976
BmrFI	CCNGG	6 cut(s)	863, 864, 923, 1170, 1287, 1492
BmsI	GCATC	4 cut(s)	334, 466, 531, 1109
BpiI	GAAGAC	2 cut(s)	1311, 1543
BpmI	CTGGAG	5 cut(s)	426, 474, 669, 1783, 1983
Bpu10I	CCTNAGC	3 cut(s)	519, 1313, 1793
Bpu1102I	GCTNAGC	1 cut(s)	2139
Bpu14I	TTCGAA	2 cut(s)	1241, 1448
BpuEI	CTTGAG	1 cut(s)	167
BpuMI	CCSGG	4 cut(s)	863, 864, 923, 1492
BsaAI	YACGTR	1 cut(s)	2047
BsaBI	GATNNNNATC	2 cut(s)	78, 465
BsaI	GGTCTC	3 cut(s)	192, 230, 879
BsaJI	CCNNGG	6 cut(s)	862, 890, 1077, 1490, 1518, 1673
BsaWI	WCCGGW	5 cut(s)	730, 1840, 1891, 2065, 2074
BsaXI	ACNNNNNCTCC	4 cut(s)	399, 429, 1176, 1206
Bsc4I	CCNNNNNNNGG	3 cut(s)	1832, 1898, 1984
Bse118I	RCCGGY	2 cut(s)	1840, 2074
Bse1I	ACTGG	5 cut(s)	652, 1111, 1558, 1978, 1989
Bse21I	CCTNAGG	1 cut(s)	2035
Bse8I	GATNNNNATC	2 cut(s)	78, 465
BseBI	CCWGG	2 cut(s)	1170, 1287
BseDI	CCNNGG	6 cut(s)	862, 890, 1077, 1490, 1518, 1673
BseGI	GGATG	4 cut(s)	481, 997, 1354, 1434
BseJI	GATNNNNATC	2 cut(s)	78, 465
BseLI	CCNNNNNNNGG	3 cut(s)	1832, 1898, 1984
BseMII	CTCAG	8 cut(s)	834, 1019, 1403, 1482, 1742, 1822, 1923, 2049
BseNI	ACTGG	5 cut(s)	652, 1111, 1558, 1978, 1989
BseRI	GAGGAG	7 cut(s)	423, 892, 895, 966, 1094, 1379, 1662
BseYI	CCCAGC	1 cut(s)	2090
Bsh1236I	CGCG	3 cut(s)	773, 875, 1520
Bsh1285I	CGRYCG	1 cut(s)	238
BshFI	GGCC	2 cut(s)	811, 1255
BshTI	ACCGGT	2 cut(s)	1840, 2074
BsiEI	CGRYCG	1 cut(s)	238
BsiHKAI	GWGCWC	4 cut(s)	1048, 1711, 1809, 1910
BsiHKCI	CYCGRG	4 cut(s)	862, 889, 1076, 1710
BslFI	GGGAC	2 cut(s)	1183, 1253
BslI	CCNNNNNNNGG	3 cut(s)	1832, 1898, 1984
BsmAI	GTCTC	9 cut(s)	192, 230, 879, 1166, 1192, 1239, 1602, 1674, 1988
BsmFI	GGGAC	2 cut(s)	1183, 1253
BsmI	GAATGC	3 cut(s)	424, 992, 1141
BsnI	GGCC	2 cut(s)	811, 1255
Bso31I	GGTCTC	3 cut(s)	192, 230, 879
BsoBI	CYCGRG	4 cut(s)	862, 889, 1076, 1710
Bsp119I	TTCGAA	2 cut(s)	1241, 1448
Bsp1286I	GDGCHC	4 cut(s)	1048, 1711, 1809, 1910
Bsp1720I	GCTNAGC	1 cut(s)	2139
BspANI	GGCC	2 cut(s)	811, 1255
BspCNI	CTCAG	8 cut(s)	835, 1018, 1404, 1481, 1741, 1821, 1922, 2048
BspFNI	CGCG	3 cut(s)	773, 875, 1520
BspLI	GGNNCC	3 cut(s)	1016, 1119, 1976
BspPI	GGATC	6 cut(s)	19, 577, 670, 731, 1882, 2091
BspQI	GCTCTTC	1 cut(s)	1486
BspT104I	TTCGAA	2 cut(s)	1241, 1448
BspTNI	GGTCTC	3 cut(s)	192, 230, 879
BsrBI	CCGCTC	2 cut(s)	586, 682
BsrFI	RCCGGY	2 cut(s)	1840, 2074
BsrI	ACTGG	5 cut(s)	652, 1111, 1558, 1978, 1989
BssAI	RCCGGY	2 cut(s)	1840, 2074
BssECI	CCNNGG	6 cut(s)	862, 890, 1077, 1490, 1518, 1673
BssSI	CACGAG	1 cut(s)	819
Bst2BI	CACGAG	1 cut(s)	819
Bst2UI	CCWGG	2 cut(s)	1170, 1287
Bst4CI	ACNGT	6 cut(s)	115, 236, 359, 764, 977, 1302
Bst6I	CTCTTC	1 cut(s)	1486
BstBAI	YACGTR	1 cut(s)	2047
BstBI	TTCGAA	2 cut(s)	1241, 1448
BstC8I	GCNNGC	6 cut(s)	139, 143, 153, 364, 992, 1310
BstDSI	CCRYGG	1 cut(s)	1518
BstF5I	GGATG	4 cut(s)	481, 997, 1354, 1434
BstFNI	CGCG	3 cut(s)	773, 875, 1520
BstHHI	GCGC	3 cut(s)	398, 973, 1069
BstMAI	GTCTC	9 cut(s)	192, 230, 879, 1166, 1192, 1239, 1602, 1674, 1988
BstMCI	CGRYCG	1 cut(s)	238
BstNI	CCWGG	2 cut(s)	1170, 1287
BstNSI	RCATGY	1 cut(s)	1594
BstSCI	CCNGG	6 cut(s)	861, 862, 921, 1168, 1285, 1490
BstSFI	CTRYAG	1 cut(s)	1298
BstUI	CGCG	3 cut(s)	773, 875, 1520
BstV2I	GAAGAC	2 cut(s)	1311, 1543
BstX2I	RGATCY	4 cut(s)	44, 1459, 1874, 1931
BstYI	RGATCY	4 cut(s)	44, 1459, 1874, 1931
Bsu36I	CCTNAGG	1 cut(s)	2035
BsuI	GTATCC	2 cut(s)	121, 738
BsuRI	GGCC	2 cut(s)	811, 1255
BtgI	CCRYGG	1 cut(s)	1518
BtrI	CACGTC	1 cut(s)	352
BtsCI	GGATG	4 cut(s)	481, 997, 1354, 1434
BtsI	GCAGTG	2 cut(s)	381, 391
BtsIMutI	CAGTG	5 cut(s)	381, 391, 1497, 1736, 1982
Cac8I	GCNNGC	6 cut(s)	139, 143, 153, 364, 992, 1310
CaiI	CAGNNNCTG	2 cut(s)	671, 1984
CfoI	GCGC	3 cut(s)	398, 973, 1069
Cfr10I	RCCGGY	2 cut(s)	1840, 2074
Cfr13I	GGNCC	3 cut(s)	805, 1014, 1975
Cfr42I	CCGCGG	1 cut(s)	1521
Cfr9I	CCCGGG	1 cut(s)	862
Csp6I	GTAC	3 cut(s)	232, 1009, 1096
CspAI	ACCGGT	2 cut(s)	1840, 2074
CviAII	CATG	9 cut(s)	100, 833, 1195, 1591, 1702, 1720, 1857, 1971, 2087
CviQI	GTAC	3 cut(s)	232, 1009, 1096
DraIII	CACNNNGTG	1 cut(s)	979
DriI	GACNNNNNGTC	1 cut(s)	846
EaeI	YGGCCR	1 cut(s)	1253
Eam1104I	CTCTTC	1 cut(s)	1486
Eam1105I	GACNNNNNGTC	1 cut(s)	846
EarI	CTCTTC	1 cut(s)	1486
Ecl136II	GAGCTC	2 cut(s)	1807, 1908
Eco24I	GRGCYC	2 cut(s)	1809, 1910
Eco31I	GGTCTC	3 cut(s)	192, 230, 879
Eco32I	GATATC	2 cut(s)	754, 1339
Eco47I	GGWCC	3 cut(s)	805, 1014, 1975
Eco53kI	GAGCTC	2 cut(s)	1807, 1908
Eco57I	CTGAAG	2 cut(s)	501, 530
Eco72I	CACGTG	1 cut(s)	2047
Eco81I	CCTNAGG	1 cut(s)	2035
Eco88I	CYCGRG	4 cut(s)	862, 889, 1076, 1710
EcoICRI	GAGCTC	2 cut(s)	1807, 1908
EcoO109I	RGGNCCY	1 cut(s)	1014
EcoRI	GAATTC	1 cut(s)	713
EcoRII	CCWGG	2 cut(s)	1168, 1285
EcoRV	GATATC	2 cut(s)	754, 1339
EcoT38I	GRGCYC	2 cut(s)	1809, 1910
FaeI	CATG	9 cut(s)	103, 836, 1198, 1594, 1705, 1723, 1860, 1974, 2090
FalI	AAGNNNNNCTT	2 cut(s)	1603, 1635
FaqI	GGGAC	2 cut(s)	1183, 1253
FatI	CATG	9 cut(s)	99, 832, 1194, 1590, 1701, 1719, 1856, 1970, 2086
FauI	CCCGC	4 cut(s)	359, 1044, 1209, 1213
FbaI	TGATCA	2 cut(s)	318, 373
FblI	GTMKAC	1 cut(s)	213
FokI	GGATG	4 cut(s)	488, 984, 1361, 1441
FriOI	GRGCYC	2 cut(s)	1809, 1910
FspAI	RTGCGCAY	1 cut(s)	972
FspBI	CTAG	3 cut(s)	1128, 1821, 2096
FspI	TGCGCA	2 cut(s)	972, 1068
GlaI	GCGC	3 cut(s)	397, 972, 1068
GsaI	CCCAGC	1 cut(s)	2094
GsuI	CTGGAG	5 cut(s)	426, 474, 669, 1783, 1983
HaeIII	GGCC	2 cut(s)	811, 1255
HhaI	GCGC	3 cut(s)	398, 973, 1069
Hin1II	CATG	9 cut(s)	103, 836, 1198, 1594, 1705, 1723, 1860, 1974, 2090
Hin6I	GCGC	3 cut(s)	396, 971, 1067
HinP1I	GCGC	3 cut(s)	396, 971, 1067
HincII	GTYRAC	4 cut(s)	265, 488, 1636, 1889
HindII	GTYRAC	4 cut(s)	265, 488, 1636, 1889
HindIII	AAGCTT	4 cut(s)	323, 521, 1612, 2100
HinfI	GANTC	9 cut(s)	103, 277, 466, 589, 1159, 1185, 1450, 1502, 1996
HphI	GGTGA	9 cut(s)	509, 669, 851, 878, 1614, 1689, 1830, 1964, 1999
Hpy188I	TCNGA	8 cut(s)	16, 378, 615, 1413, 1428, 1677, 1811, 1912
Hpy99I	CGWCG	1 cut(s)	1348
HpyCH4III	ACNGT	6 cut(s)	115, 236, 359, 764, 977, 1302
HpyCH4IV	ACGT	3 cut(s)	131, 351, 2046
HpyCH4V	TGCA	7 cut(s)	155, 449, 1026, 1148, 1279, 1331, 2119
HpySE526I	ACGT	3 cut(s)	131, 351, 2046
Hsp92II	CATG	9 cut(s)	103, 836, 1198, 1594, 1705, 1723, 1860, 1974, 2090
HspAI	GCGC	3 cut(s)	396, 971, 1067
Ksp22I	TGATCA	2 cut(s)	318, 373
KspI	CCGCGG	1 cut(s)	1521
LguI	GCTCTTC	1 cut(s)	1486
LmnI	GCTCC	7 cut(s)	410, 455, 550, 583, 938, 1081, 1802
LweI	GCATC	4 cut(s)	334, 466, 531, 1109
MaeI	CTAG	3 cut(s)	1128, 1821, 2096
MaeII	ACGT	3 cut(s)	131, 351, 2046
MaeIII	GTNAC	4 cut(s)	85, 387, 601, 1980
MbiI	CCGCTC	2 cut(s)	586, 682
MflI	RGATCY	4 cut(s)	44, 1459, 1874, 1931
MhlI	GDGCHC	4 cut(s)	1048, 1711, 1809, 1910
MlsI	TGGCCA	1 cut(s)	1255
MluCI	AATT	3 cut(s)	57, 713, 2146
MluNI	TGGCCA	1 cut(s)	1255
MlyI	GAGTC	4 cut(s)	271, 1168, 1194, 1990
MmeI	TCCRAC	3 cut(s)	453, 1406, 1588
Mox20I	TGGCCA	1 cut(s)	1255
MroXI	GAANNNNTTC	1 cut(s)	793
MscI	TGGCCA	1 cut(s)	1255
MseI	TTAA	4 cut(s)	23, 110, 435, 696
MslI	CAYNNNNRTG	5 cut(s)	98, 314, 631, 864, 1867
Msp20I	TGGCCA	1 cut(s)	1255
MspA1I	CMGCKG	7 cut(s)	452, 909, 1115, 1151, 1220, 1520, 1547
MspR9I	CCNGG	6 cut(s)	863, 864, 923, 1170, 1287, 1492
Mva1269I	GAATGC	3 cut(s)	424, 992, 1141
MvaI	CCWGG	2 cut(s)	1170, 1287
MvnI	CGCG	3 cut(s)	773, 875, 1520
NciI	CCSGG	4 cut(s)	863, 864, 923, 1492
NlaIII	CATG	9 cut(s)	103, 836, 1198, 1594, 1705, 1723, 1860, 1974, 2090
NlaIV	GGNNCC	3 cut(s)	1016, 1119, 1976
NmeAIII	GCCGAG	2 cut(s)	663, 1027
NmuCI	GTSAC	2 cut(s)	601, 1980
NsbI	TGCGCA	2 cut(s)	972, 1068
NspI	RCATGY	1 cut(s)	1594
NspV	TTCGAA	2 cut(s)	1241, 1448
OliI	CACNNNNGTG	1 cut(s)	864
PciSI	GCTCTTC	1 cut(s)	1486
PcsI	WCGNNNNNNNCGW	1 cut(s)	1130
PctI	GAATGC	3 cut(s)	424, 992, 1141
PdmI	GAANNNNTTC	1 cut(s)	793
PfeI	GAWTC	5 cut(s)	103, 466, 589, 1450, 1502
PflMI	CCANNNNNTGG	2 cut(s)	1832, 1984
PinAI	ACCGGT	2 cut(s)	1840, 2074
PleI	GAGTC	4 cut(s)	271, 1167, 1193, 1990
PmaCI	CACGTG	1 cut(s)	2047
PmlI	CACGTG	1 cut(s)	2047
PpsI	GAGTC	4 cut(s)	271, 1167, 1193, 1990
Ppu21I	YACGTR	1 cut(s)	2047
PpuMI	RGGWCCY	1 cut(s)	1014
Psp124BI	GAGCTC	2 cut(s)	1809, 1910
Psp5II	RGGWCCY	1 cut(s)	1014
Psp6I	CCWGG	2 cut(s)	1168, 1285
PspCI	CACGTG	1 cut(s)	2047
PspFI	CCCAGC	1 cut(s)	2090
PspGI	CCWGG	2 cut(s)	1168, 1285
PspN4I	GGNNCC	3 cut(s)	1016, 1119, 1976
PspPI	GGNCC	3 cut(s)	805, 1014, 1975
PspPPI	RGGWCCY	1 cut(s)	1014
PsrI	GAACNNNNNNTAC	2 cut(s)	752, 784
PstNI	CAGNNNCTG	2 cut(s)	671, 1984
PsuI	RGATCY	4 cut(s)	44, 1459, 1874, 1931
PvuII	CAGCTG	4 cut(s)	452, 909, 1151, 1547
RsaI	GTAC	3 cut(s)	233, 1010, 1097
RsaNI	GTAC	3 cut(s)	232, 1009, 1096
RseI	CAYNNNNRTG	5 cut(s)	98, 314, 631, 864, 1867
SacI	GAGCTC	2 cut(s)	1809, 1910
SacII	CCGCGG	1 cut(s)	1521
SapI	GCTCTTC	1 cut(s)	1486
SaqAI	TTAA	4 cut(s)	23, 110, 435, 696
Sau96I	GGNCC	3 cut(s)	805, 1014, 1975
SchI	GAGTC	4 cut(s)	271, 1168, 1194, 1990
ScrFI	CCNGG	6 cut(s)	863, 864, 923, 1170, 1287, 1492
SduI	GDGCHC	4 cut(s)	1048, 1711, 1809, 1910
SfaNI	GCATC	4 cut(s)	334, 466, 531, 1109
SfcI	CTRYAG	1 cut(s)	1298
Sfr303I	CCGCGG	1 cut(s)	1521
SfuI	TTCGAA	2 cut(s)	1241, 1448
SgrBI	CCGCGG	1 cut(s)	1521
SinI	GGWCC	3 cut(s)	805, 1014, 1975
SmaI	CCCGGG	1 cut(s)	864
SmiMI	CAYNNNNRTG	5 cut(s)	98, 314, 631, 864, 1867
SmlI	CTYRAG	1 cut(s)	146
SmoI	CTYRAG	1 cut(s)	146
Sse9I	AATT	3 cut(s)	57, 713, 2146
SspMI	CTAG	3 cut(s)	1128, 1821, 2096
SstI	GAGCTC	2 cut(s)	1809, 1910
StyD4I	CCNGG	6 cut(s)	861, 862, 921, 1168, 1285, 1490
TaaI	ACNGT	6 cut(s)	115, 236, 359, 764, 977, 1302
TaiI	ACGT	3 cut(s)	134, 354, 2049
TaqI	TCGA	8 cut(s)	66, 117, 192, 1087, 1133, 1241, 1448, 2124
TaqII	GACCGA	1 cut(s)	33
TasI	AATT	3 cut(s)	57, 713, 2146
TatI	WGTACW	1 cut(s)	1008
TfiI	GAWTC	5 cut(s)	103, 466, 589, 1450, 1502
Tru1I	TTAA	4 cut(s)	23, 110, 435, 696
Tru9I	TTAA	4 cut(s)	23, 110, 435, 696
TscAI	CASTG	5 cut(s)	388, 398, 1504, 1736, 1989
TseFI	GTSAC	2 cut(s)	601, 1980
Tsp45I	GTSAC	2 cut(s)	601, 1980
TspDTI	ATGAA	5 cut(s)	116, 986, 1445, 1473, 2066
TspGWI	ACGGA	7 cut(s)	270, 318, 621, 729, 1242, 1361, 1775
TspMI	CCCGGG	1 cut(s)	862
TspRI	CASTG	5 cut(s)	388, 398, 1504, 1736, 1989
Van91I	CCANNNNNTGG	2 cut(s)	1832, 1984
VpaK11BI	GGWCC	3 cut(s)	805, 1014, 1975
XapI	RAATTY	1 cut(s)	713
XceI	RCATGY	1 cut(s)	1594
XmaI	CCCGGG	1 cut(s)	862
XmiI	GTMKAC	1 cut(s)	213
XmnI	GAANNNNTTC	1 cut(s)	793
XspI	CTAG	3 cut(s)	1128, 1821, 2096

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.