Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0003620

Physical Location & Seq

Genomic Coordinates Reverse (-)

27046198 .. 27050737

Gene Structure 4540 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG272500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGTGCTATGGATCAGAGTGGGTAAAACCCTGTTCATCTTCAGCAGCATCTCCCATCGTTGACGAACACTTTAACACAACCATGAATCACTTGACAGTTGAAACTGAAGATACTTTTGCCAGCTTACTTGAACTTGCAGCAAACAATGACATTGAGAGCTTCAGACGATCGATACAGCACAATCCTTCTGCCATCGATGAGATTGGCTTATGGTACTGTCGTCAGAAGGGCTCAAAGCAGATGGTTAATGAGCTCAGAACCCCTTTAATGGTTGCCGCTACATATGGTAGTAATGATGTCATAAAGCTGATTCTTTCTCTCTCTGATGCTGATGTAAATCAGACCTGTGGTAATGATAGAAGCACTGCTCTACACTGCGCTGCTTCAGGTGGTGCTGAGAATGCTGTCGATACTGTGAGGCTGCTTTTAGCTGCTGGTGCTGATCCTAATTTGATTGATGCAAATGGTCATCGTCCTGTTGATGTTATAGTTGTTCCTCCTAGGCTCCAGAATGTCAGATTAGCTCTTGAAGAACTCCTTATGATTAACGGTTCTGTTGGTGAACAAATTCTCTCAGTCTCAACAAGAGCCCTTTCTCCTCCTCTATCAACTTCTCCAGACAATGGGTCTCCATCAGCTTTAGATTTCACTTGTTCTCCGACAAAGTCAAAGTTCTATAATATTACTGTTTCTTCTGCATCAGAGAAGAAGGAATACCCTGTTGACCCCTCTCTCCCAGACATCAAAAACAGTATTTATTCAACTGATGAATTCCGTATGTATTCGTTCAAGGTGAGGCCTTGTTCACGTGCCTACTCCCATGATTGGACTGAGTGCCCTTTTGTCCATCCTGGAGAAAATGCACGAAGAAGGGATCCAAGGAAGTTTCATTACAGCTGTGTTCCTTGCCCCGACTTCCGAAAAGGGGCTTGCAGGCGTGGAGATATGTGTGAATATGCTCATGGGGTTTTTGAGTGTTGGCTACACCCAGCTCAATATCGAACCCGACTCTGCAAGGATGGTACAAGTTGTGCGAGGAGAGTCTGCTTTTTTGCCCACACAGCAGAGGAACTCAGGCCATTGTATGTCTCTACTGGTTCTGCTGTTCCTTCTCCTCGCTCGACCACTTCCGGTGCTTCAGCCATGGATTTTGCTGCTGCAATGAGCCTCTTGCCTGGTTCTCCTTCATCACTCTCTGCCATGTCTCCTTCACCATTTACTCCACCCATGTCTCCCTCTGGCAATGGCATGTCACACTCTTCTGTAGCTTGGCCCCAACCTAATGTCCCGGCTCTGCATCTCCCAGGCAGCAATATTCAGTCTAGTCGCTTGAGGTCTTCCCTTTGTGCAAGAGATATGGCAGCAGATGACTTTGATTTACTGCCAGAGTTTGATATGCAGCAACAGCAGCTCCTAAATGAATTATCTATGAGTAATTCACTGAACCGTTCTGGTCGGTTGAATACCTTAACACCCTCAAATTTGGATGATCTCTTTTCTGCTGAGAACTTATCTCCTCGCTACTCTGATCAAGCATTGGCATCAGCTGTGTTCTCCCCAACTCACAAGTCAGCTCTTCTCAATCAGTTTCAGCAGCAACAGAGCATGCTTTCACCAATCCATACAAACTTTTCGCCCAAAAATACTGTTGATCACCCTCTATTGCAGGCTCCCTTTGGAGCACCATCCTCTGGGAGGATGTCTCCCCGAAATGTGGAACCTATCTCACCAATGGGCTCTCGGGTTTCCATGCTAGGTCAACGGGAGAAGCAACAGTTTCGTAGCCTTAGTTCACGGGAGCTTGGCTCCAGCTCCACTTCCAATATTGGTTCCCCTGCAAATGCTTGGTCAAAATGGGGATCGTCTGATGGAAAACCAGATTGGGCAGTTACTTCAGATGAATTGGGAAAGCTTCGCAGATCATCTTCATTTGAGCTGGGGAACAATGGAGAGGAACCAGATCTTTCGTGGGTTCAGTCACTTGTTAAAGAATCTCCTACTGAAATCAAAGAAAAGCTAACAACACCCGTCTCAGGTGTTGCGGCCACTGGATCCTCCAATGACGGTTTAAGTGCAAACTCCCAAATGGAATCGGTTGATCATGCAGCAATGGGAGCTTGGATTGACCAACTACATCTTGATCTTGTGGCTCAGCAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 zf-CCCH

Protein Analysis

720

Amino Acids

78.29

Weight (kDa)

5.8

Isoelectric Point (pI)

58.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	84 - 153	1e-10	Ankyrin repeats (3 copies)
Ank	PF00023	121 - 153	6.1e-06	Ankyrin repeat
zf-CCCH_AtC3H23	PF25512	257 - 290	5.9e-21	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003620)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41900
fragaria_vesca	FvH4_7g01060
malus_domestica	MD03G1175400.v1.1 MD12G1068100.v1.1 MD14G1068200.v1.1
prunus_persica	Prupe.4G248900_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1
pyrus_communis	pycom03g13290 pycom11g16880 pycom12g06010
rosa_chinensis	RchiOBHm_Chr1g0316051 RchiOBHm_Chr3g0481371
rosa_laevigata	RLG00000023402 RLG00000030707
rosa_multiflora	Rmu_sc0000064.1_g000020 Rmu_sc0002014.1_g000008 Rmu_sc0002531.1_g000041
rosa_roxburghii	Rroxscaffold_6G00400470
rosa_rugosa	Rorug01G0008400 Rorug01G0008400 Rorug01G0008500 Rorug03G0191500 Rorug03G0191600
rosa_samantha	Rh1AG018800 Rh1BG012300 Rh1CG016100 Rh1DG012500 Rh3AG242500 Rh3BG277500 Rh3CG272500 Rh3DG269400
rosa_wichuraiana	Rw1G001200 Rw3G021670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	623, 1691
AciI	CCGC	2 cut(s)	276, 2042
AclWI	GGATC	7 cut(s)	19, 437, 869, 882, 1867, 2046, 2059
AcoI	YGGCCR	1 cut(s)	2043
AcsI	RAATTY	3 cut(s)	567, 770, 1480
AcuI	CTGAAG	6 cut(s)	24, 126, 145, 369, 1122, 1878
AcvI	CACGTG	1 cut(s)	809
AfaI	GTAC	2 cut(s)	215, 1024
AfiI	CCNNNNNNNGG	8 cut(s)	268, 623, 825, 925, 1691, 1695, 1714, 2033
AgsI	TTSAA	6 cut(s)	101, 131, 530, 762, 790, 1462
AhdI	GACNNNNNGTC	1 cut(s)	625
AjnI	CCWGG	3 cut(s)	850, 1174, 1303
AjuI	GAANNNNNNNTTGG	2 cut(s)	1864, 1896
Alw21I	GWGCWC	2 cut(s)	255, 1684
Alw26I	GTCTC	7 cut(s)	583, 633, 1093, 1209, 1236, 1707, 2035
AlwI	GGATC	7 cut(s)	19, 437, 869, 882, 1867, 2046, 2059
Ama87I	CYCGRG	1 cut(s)	1740
AoxI	GGCC	4 cut(s)	797, 1076, 1271, 2043
ApoI	RAATTY	3 cut(s)	567, 770, 1480
ArsI	GACNNNNNNTTYG	2 cut(s)	1832, 1864
Asp700I	GAANNNNTTC	1 cut(s)	567
AspA2I	CCTAGG	1 cut(s)	500
AspLEI	GCGC	1 cut(s)	380
AspS9I	GGNCC	1 cut(s)	1272
AsuC2I	CCSGG	1 cut(s)	1289
AsuHPI	GGTGA	6 cut(s)	572, 805, 1203, 1605, 1646, 1719
AvaI	CYCGRG	1 cut(s)	1740
AvrII	CCTAGG	1 cut(s)	500
BaeGI	GKGCMC	1 cut(s)	839
BaeI	ACNNNNGTAYC	2 cut(s)	205, 238
BamHI	GGATCC	2 cut(s)	874, 2051
BanII	GRGCYC	4 cut(s)	233, 255, 592, 1739
BarI	GAAGNNNNNNTAC	4 cut(s)	698, 730, 875, 907
BbrPI	CACGTG	1 cut(s)	809
BbsI	GAAGAC	1 cut(s)	1329
Bbv12I	GWGCWC	2 cut(s)	255, 1684
BccI	CCATC	8 cut(s)	62, 200, 235, 640, 855, 1013, 1693, 1862
BcgI	CGANNNNNNTGC	2 cut(s)	1760, 1794
BciT130I	CCWGG	3 cut(s)	852, 1176, 1305
BclI	TGATCA	3 cut(s)	1528, 1651, 2098
BcnI	CCSGG	1 cut(s)	1289
BcoDI	GTCTC	7 cut(s)	583, 633, 1093, 1209, 1236, 1707, 2035
BfaI	CTAG	3 cut(s)	501, 1323, 1754
BfmI	CTRYAG	1 cut(s)	1263
BglII	AGATCT	1 cut(s)	1960
BlnI	CCTAGG	1 cut(s)	500
BlpI	GCTNAGC	1 cut(s)	2151
Bme1390I	CCNGG	4 cut(s)	852, 1176, 1289, 1305
BmeRI	GACNNNNNGTC	1 cut(s)	625
BmeT110I	CYCGRG	1 cut(s)	1740
BmgT120I	GGNCC	1 cut(s)	1272
BmiI	GGNNCC	9 cut(s)	506, 876, 1274, 1671, 1719, 1807, 1831, 1956, 2053
BmrFI	CCNGG	4 cut(s)	852, 1176, 1289, 1305
BmsI	GCATC	6 cut(s)	56, 316, 448, 707, 1306, 1550
BpiI	GAAGAC	1 cut(s)	1329
BplI	GAGNNNNNCTC	4 cut(s)	1687, 1719, 1790, 1822
BpmI	CTGGAG	4 cut(s)	491, 600, 873, 1792
Bpu1102I	GCTNAGC	1 cut(s)	2151
BpuEI	CTTGAG	1 cut(s)	1351
BpuMI	CCSGG	1 cut(s)	1289
Bsa29I	ATCGAT	2 cut(s)	170, 195
BsaAI	YACGTR	1 cut(s)	809
BsaBI	GATNNNNATC	1 cut(s)	336
BsaI	GGTCTC	1 cut(s)	633
BsaJI	CCNNGG	4 cut(s)	500, 878, 1143, 1303
BsaWI	WCCGGW	1 cut(s)	1130
BsaXI	ACNNNNNCTCC	4 cut(s)	640, 670, 1395, 1425
Bsc4I	CCNNNNNNNGG	8 cut(s)	268, 623, 825, 925, 1691, 1695, 1714, 2033
Bse1I	ACTGG	2 cut(s)	1099, 2053
Bse3DI	GCAATG	3 cut(s)	1167, 1249, 2115
Bse8I	GATNNNNATC	1 cut(s)	336
BseBI	CCWGG	3 cut(s)	852, 1176, 1305
BseCI	ATCGAT	2 cut(s)	170, 195
BseDI	CCNNGG	4 cut(s)	500, 878, 1143, 1303
BseGI	GGATG	5 cut(s)	847, 1024, 1492, 1685, 1704
BseJI	GATNNNNATC	1 cut(s)	336
BseLI	CCNNNNNNNGG	8 cut(s)	268, 623, 825, 925, 1691, 1695, 1714, 2033
BseMI	GCAATG	3 cut(s)	1167, 1249, 2115
BseMII	CTCAG	7 cut(s)	268, 387, 588, 822, 1087, 1494, 2046
BseNI	ACTGG	2 cut(s)	1099, 2053
BseRI	GAGGAG	5 cut(s)	588, 591, 1051, 1104, 1506
BseSI	GKGCMC	1 cut(s)	839
BseYI	CCCAGC	2 cut(s)	988, 1936
Bsh1285I	CGRYCG	1 cut(s)	170
BshFI	GGCC	4 cut(s)	799, 1078, 1273, 2045
BshVI	ATCGAT	2 cut(s)	170, 195
BsiEI	CGRYCG	1 cut(s)	170
BsiHKAI	GWGCWC	2 cut(s)	255, 1684
BsiHKCI	CYCGRG	1 cut(s)	1740
BsiSI	CCGG	2 cut(s)	1131, 1289
BslFI	GGGAC	1 cut(s)	1271
BslI	CCNNNNNNNGG	8 cut(s)	268, 623, 825, 925, 1691, 1695, 1714, 2033
BsmAI	GTCTC	7 cut(s)	583, 633, 1093, 1209, 1236, 1707, 2035
BsmBI	CGTCTC	1 cut(s)	2035
BsmFI	GGGAC	1 cut(s)	1271
BsmI	GAATGC	1 cut(s)	406
BsnI	GGCC	4 cut(s)	799, 1078, 1273, 2045
Bso31I	GGTCTC	1 cut(s)	633
BsoBI	CYCGRG	1 cut(s)	1740
Bsp1286I	GDGCHC	6 cut(s)	233, 255, 592, 839, 1684, 1739
Bsp1720I	GCTNAGC	1 cut(s)	2151
Bsp19I	CCATGG	1 cut(s)	1143
BspACI	CCGC	2 cut(s)	276, 2042
BspANI	GGCC	4 cut(s)	799, 1078, 1273, 2045
BspCNI	CTCAG	7 cut(s)	267, 388, 587, 823, 1086, 1495, 2045
BspDI	ATCGAT	2 cut(s)	170, 195
BspLI	GGNNCC	9 cut(s)	506, 876, 1274, 1671, 1719, 1807, 1831, 1956, 2053
BspPI	GGATC	7 cut(s)	19, 437, 869, 882, 1867, 2046, 2059
BspQI	GCTCTTC	1 cut(s)	1581
BspTNI	GGTCTC	1 cut(s)	633
BsrDI	GCAATG	3 cut(s)	1167, 1249, 2115
BsrI	ACTGG	2 cut(s)	1099, 2053
BssECI	CCNNGG	4 cut(s)	500, 878, 1143, 1303
BssT1I	CCWWGG	3 cut(s)	500, 878, 1143
Bst2UI	CCWGG	3 cut(s)	852, 1176, 1305
Bst6I	CTCTTC	2 cut(s)	1264, 1581
BstBAI	YACGTR	1 cut(s)	809
BstC8I	GCNNGC	5 cut(s)	121, 931, 935, 1607, 1668
BstDEI	CTNAG	9 cut(s)	254, 396, 574, 831, 1073, 1503, 1787, 2032, 2151
BstDSI	CCRYGG	1 cut(s)	1143
BstENI	CCTNNNNNAGG	1 cut(s)	1693
BstF5I	GGATG	5 cut(s)	847, 1024, 1492, 1685, 1704
BstHHI	GCGC	1 cut(s)	380
BstMAI	GTCTC	7 cut(s)	583, 633, 1093, 1209, 1236, 1707, 2035
BstMCI	CGRYCG	1 cut(s)	170
BstMWI	GCNNNNNNNGC	6 cut(s)	401, 437, 1061, 1405, 1408, 2114
BstNI	CCWGG	3 cut(s)	852, 1176, 1305
BstNSI	RCATGY	2 cut(s)	1252, 1609
BstSCI	CCNGG	4 cut(s)	850, 1174, 1287, 1303
BstSFI	CTRYAG	1 cut(s)	1263
BstSLI	GKGCMC	1 cut(s)	839
BstV2I	GAAGAC	1 cut(s)	1329
BstX2I	RGATCY	3 cut(s)	874, 1960, 2051
BstYI	RGATCY	3 cut(s)	874, 1960, 2051
Bsu15I	ATCGAT	2 cut(s)	170, 195
BsuRI	GGCC	4 cut(s)	799, 1078, 1273, 2045
BsuTUI	ATCGAT	2 cut(s)	170, 195
BtgI	CCRYGG	1 cut(s)	1143
BtsCI	GGATG	5 cut(s)	847, 1024, 1492, 1685, 1704
BtsI	GCAGTG	2 cut(s)	363, 373
BtsIMutI	CAGTG	4 cut(s)	363, 373, 1439, 2046
Cac8I	GCNNGC	5 cut(s)	121, 931, 935, 1607, 1668
CfoI	GCGC	1 cut(s)	380
Cfr13I	GGNCC	1 cut(s)	1272
ClaI	ATCGAT	2 cut(s)	170, 195
Csp6I	GTAC	2 cut(s)	214, 1023
CviQI	GTAC	2 cut(s)	214, 1023
DdeI	CTNAG	9 cut(s)	254, 396, 574, 831, 1073, 1503, 1787, 2032, 2151
DriI	GACNNNNNGTC	1 cut(s)	625
EaeI	YGGCCR	1 cut(s)	2043
Eam1104I	CTCTTC	2 cut(s)	1264, 1581
Eam1105I	GACNNNNNGTC	1 cut(s)	625
EarI	CTCTTC	2 cut(s)	1264, 1581
Ecl136II	GAGCTC	1 cut(s)	253
Eco130I	CCWWGG	3 cut(s)	500, 878, 1143
Eco147I	AGGCCT	1 cut(s)	799
Eco24I	GRGCYC	4 cut(s)	233, 255, 592, 1739
Eco31I	GGTCTC	1 cut(s)	633
Eco53kI	GAGCTC	1 cut(s)	253
Eco57I	CTGAAG	6 cut(s)	24, 126, 145, 369, 1122, 1878
Eco72I	CACGTG	1 cut(s)	809
Eco88I	CYCGRG	1 cut(s)	1740
EcoICRI	GAGCTC	1 cut(s)	253
EcoNI	CCTNNNNNAGG	1 cut(s)	1693
EcoRI	GAATTC	1 cut(s)	770
EcoRII	CCWGG	3 cut(s)	850, 1174, 1303
EcoT14I	CCWWGG	3 cut(s)	500, 878, 1143
EcoT38I	GRGCYC	4 cut(s)	233, 255, 592, 1739
ErhI	CCWWGG	3 cut(s)	500, 878, 1143
Esp3I	CGTCTC	1 cut(s)	2035
FalI	AAGNNNNNCTT	2 cut(s)	522, 554
FaqI	GGGAC	1 cut(s)	1271
FauNDI	CATATG	1 cut(s)	283
FbaI	TGATCA	3 cut(s)	1528, 1651, 2098
FokI	GGATG	5 cut(s)	834, 1031, 1499, 1672, 1711
FriOI	GRGCYC	4 cut(s)	233, 255, 592, 1739
FspBI	CTAG	3 cut(s)	501, 1323, 1754
GlaI	GCGC	1 cut(s)	379
GsaI	CCCAGC	2 cut(s)	992, 1940
GsuI	CTGGAG	4 cut(s)	491, 600, 873, 1792
HaeIII	GGCC	4 cut(s)	799, 1078, 1273, 2045
HapII	CCGG	2 cut(s)	1131, 1289
HhaI	GCGC	1 cut(s)	380
Hin6I	GCGC	1 cut(s)	378
HinP1I	GCGC	1 cut(s)	378
HincII	GTYRAC	3 cut(s)	61, 724, 1760
HindII	GTYRAC	3 cut(s)	61, 724, 1760
HindIII	AAGCTT	1 cut(s)	1910
HinfI	GANTC	6 cut(s)	85, 310, 1008, 1041, 1991, 2090
HpaII	CCGG	2 cut(s)	1131, 1289
HphI	GGTGA	6 cut(s)	572, 805, 1203, 1605, 1646, 1719
Hpy166II	GTNNAC	6 cut(s)	61, 563, 724, 806, 1760, 1793
Hpy188III	TCNNGA	4 cut(s)	508, 527, 617, 2138
Hpy8I	GTNNAC	6 cut(s)	61, 563, 724, 806, 1760, 1793
HpyAV	CCTTC	7 cut(s)	195, 220, 703, 864, 1119, 1194, 1218
HpyCH4IV	ACGT	1 cut(s)	808
HpyF10VI	GCNNNNNNNGC	6 cut(s)	401, 437, 1061, 1405, 1408, 2114
HpyF3I	CTNAG	9 cut(s)	254, 396, 574, 831, 1073, 1503, 1787, 2032, 2151
HpySE526I	ACGT	1 cut(s)	808
HspAI	GCGC	1 cut(s)	378
Ksp22I	TGATCA	3 cut(s)	1528, 1651, 2098
LguI	GCTCTTC	1 cut(s)	1581
LmnI	GCTCC	8 cut(s)	510, 1416, 1675, 1679, 1798, 1811, 1817, 2114
LweI	GCATC	6 cut(s)	56, 316, 448, 707, 1306, 1550
MaeI	CTAG	3 cut(s)	501, 1323, 1754
MaeII	ACGT	1 cut(s)	808
MaeIII	GTNAC	3 cut(s)	1251, 1888, 1977
MflI	RGATCY	3 cut(s)	874, 1960, 2051
MhlI	GDGCHC	6 cut(s)	233, 255, 592, 839, 1684, 1739
MluCI	AATT	7 cut(s)	448, 567, 770, 1421, 1435, 1480, 1901
MlyI	GAGTC	2 cut(s)	1002, 1050
MmeI	TCCRAC	1 cut(s)	683
MroXI	GAANNNNTTC	1 cut(s)	567
MseI	TTAA	7 cut(s)	72, 246, 266, 546, 1469, 1986, 2069
MslI	CAYNNNNRTG	1 cut(s)	80
MspA1I	CMGCKG	2 cut(s)	897, 1547
MspI	CCGG	2 cut(s)	1131, 1289
MspR9I	CCNGG	4 cut(s)	852, 1176, 1289, 1305
Mva1269I	GAATGC	1 cut(s)	406
MvaI	CCWGG	3 cut(s)	852, 1176, 1305
MwoI	GCNNNNNNNGC	6 cut(s)	401, 437, 1061, 1405, 1408, 2114
NciI	CCSGG	1 cut(s)	1289
NcoI	CCATGG	1 cut(s)	1143
NdeI	CATATG	1 cut(s)	283
NlaIV	GGNNCC	9 cut(s)	506, 876, 1274, 1671, 1719, 1807, 1831, 1956, 2053
NmuCI	GTSAC	2 cut(s)	1251, 1977
NspI	RCATGY	2 cut(s)	1252, 1609
PaeI	GCATGC	1 cut(s)	1609
PceI	AGGCCT	1 cut(s)	799
PciSI	GCTCTTC	1 cut(s)	1581
PctI	GAATGC	1 cut(s)	406
PdmI	GAANNNNTTC	1 cut(s)	567
PfeI	GAWTC	4 cut(s)	85, 310, 1991, 2090
PflFI	GACNNNGTC	1 cut(s)	664
PflMI	CCANNNNNTGG	2 cut(s)	623, 1691
PfoI	TCCNGGA	1 cut(s)	850
Ple19I	CGATCG	1 cut(s)	170
PleI	GAGTC	2 cut(s)	1002, 1049
PmaCI	CACGTG	1 cut(s)	809
PmlI	CACGTG	1 cut(s)	809
PpsI	GAGTC	2 cut(s)	1002, 1049
Ppu21I	YACGTR	1 cut(s)	809
Psp124BI	GAGCTC	1 cut(s)	255
Psp6I	CCWGG	3 cut(s)	850, 1174, 1303
PspCI	CACGTG	1 cut(s)	809
PspFI	CCCAGC	2 cut(s)	988, 1936
PspGI	CCWGG	3 cut(s)	850, 1174, 1303
PspN4I	GGNNCC	9 cut(s)	506, 876, 1274, 1671, 1719, 1807, 1831, 1956, 2053
PspPI	GGNCC	1 cut(s)	1272
PsrI	GAACNNNNNNTAC	2 cut(s)	1774, 1806
PsuI	RGATCY	3 cut(s)	874, 1960, 2051
PsyI	GACNNNGTC	1 cut(s)	664
PvuI	CGATCG	1 cut(s)	170
PvuII	CAGCTG	2 cut(s)	897, 1547
RsaI	GTAC	2 cut(s)	215, 1024
RsaNI	GTAC	2 cut(s)	214, 1023
RseI	CAYNNNNRTG	1 cut(s)	80
SacI	GAGCTC	1 cut(s)	255
SapI	GCTCTTC	1 cut(s)	1581
SaqAI	TTAA	7 cut(s)	72, 246, 266, 546, 1469, 1986, 2069
Sau96I	GGNCC	1 cut(s)	1272
SchI	GAGTC	2 cut(s)	1002, 1050
ScrFI	CCNGG	4 cut(s)	852, 1176, 1289, 1305
SduI	GDGCHC	6 cut(s)	233, 255, 592, 839, 1684, 1739
SfaNI	GCATC	6 cut(s)	56, 316, 448, 707, 1306, 1550
SfcI	CTRYAG	1 cut(s)	1263
SmiMI	CAYNNNNRTG	1 cut(s)	80
SmlI	CTYRAG	1 cut(s)	1330
SmoI	CTYRAG	1 cut(s)	1330
SphI	GCATGC	1 cut(s)	1609
Sse9I	AATT	7 cut(s)	448, 567, 770, 1421, 1435, 1480, 1901
SseBI	AGGCCT	1 cut(s)	799
SsiI	CCGC	2 cut(s)	276, 2042
SspI	AATATT	3 cut(s)	682, 1315, 1825
SspMI	CTAG	3 cut(s)	501, 1323, 1754
SstI	GAGCTC	1 cut(s)	255
StuI	AGGCCT	1 cut(s)	799
StyD4I	CCNGG	4 cut(s)	850, 1174, 1287, 1303
StyI	CCWWGG	3 cut(s)	500, 878, 1143
TaiI	ACGT	1 cut(s)	811
TaqI	TCGA	5 cut(s)	170, 195, 408, 1000, 1121
TasI	AATT	7 cut(s)	448, 567, 770, 1421, 1435, 1480, 1901
TauI	GCSGC	2 cut(s)	278, 2045
TfiI	GAWTC	4 cut(s)	85, 310, 1991, 2090
Tru1I	TTAA	7 cut(s)	72, 246, 266, 546, 1469, 1986, 2069
Tru9I	TTAA	7 cut(s)	72, 246, 266, 546, 1469, 1986, 2069
TscAI	CASTG	4 cut(s)	370, 380, 1446, 2053
TseFI	GTSAC	2 cut(s)	1251, 1977
Tsp45I	GTSAC	2 cut(s)	1251, 1977
TspDTI	ATGAA	8 cut(s)	24, 98, 783, 878, 1176, 1434, 1914, 1917
TspGWI	ACGGA	1 cut(s)	764
TspRI	CASTG	4 cut(s)	370, 380, 1446, 2053
Tth111I	GACNNNGTC	1 cut(s)	664
Van91I	CCANNNNNTGG	2 cut(s)	623, 1691
XagI	CCTNNNNNAGG	1 cut(s)	1693
XapI	RAATTY	3 cut(s)	567, 770, 1480
XceI	RCATGY	2 cut(s)	1252, 1609
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1965
XmaJI	CCTAGG	1 cut(s)	500
XmnI	GAANNNNTTC	1 cut(s)	567
XspI	CTAG	3 cut(s)	501, 1323, 1754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.