Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0003620

Physical Location & Seq

Genomic Coordinates Reverse (-)

8075518 .. 8079738

Gene Structure 4221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1068100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGTGCAATGGATCAGACCAGATAAAACTCAATTCTTCTCCAGCGGCATCTCTTATCTCTGTTGACGAAAGTAGACTCTCCAATACAGCCATGAATCACTTGACAGTTGAAACTGAAGATGCTTTTGCCAGTTTACTTGAGCTTGCTGCGAACAATGACATTGAGAGCTTTAAACGATCAATTGAGCAGGACCCTTCTGCCATCGATGAGATTGGTTTGTGGTATTGTCGTCAGAAGGGCTCAAAACAGATGGTTAATGAGCAGAGAACCCCTTTAATGGTTGCTGCTACATACGGTAGCATTGATGTCATGAAGCTAATTCTTTCTCTCTCTGATGCTGATGTGAACCAGGCCTGTGGGCGTGATAGGAGCACTGCTCTTCACTGTGCTGCTTCAGGTGGGGCTGAGAATGCTGTGGATTGTGTGAAGCTGCTTTTAGGAGCTGGTGCTGATCCTAATTTGCTTGATGCTAACGGTCATCGGCCTATTGATGTTATAGTTGTTCCTCCTAGGCTACAAAATGTCAAATTAGCTCTAGAAGAACTCCTTGTGATAAATGGTACTGCTGGTGAAAAAACTCTCACGGTGTCAACGAGAACCATACATTCAACTTCTCCTCCACTGTCAGCTTCCCCAGAAAATGGGTCTCCTTCTGCTTTAGATTTTACTTGTTCCCCAACAAAGTCGAAGTTCTATAATTCTCTCTCTTCTGCATCAGAGAAGAAGGAATATCCTGTTGACCCCTCTCTTCCAGACATCAAGAACAGCATTTATTCAACTGATGAGTTCCGAATGTATTCATTCAAGGTGAGGCCTTGTTCACGTGCATACTCTCATGATTGGACTGAGTGCCCTTTTGTCCATCCAGGGGAAAATGCACGAAGAAGGGATCCAAGGAAATTTCATTATAGCTGTGTTCCTTGTCCTGATTTCAGAAAGGGGGCTTGCAGACGTGGAGATATGTGTGAATATGCTCATGGGGTTTTTGAGTGCTGGCTACACCCAGCTCAGTATCGGACCCGACTTTGCAAGGATGGTACAAGCTGTGCAAGGAGAGTCTGCTTTTTTGCCCACACCACAGAGGAACTCAGGCCATTATATGTTTCTACTGGTTCTGCTGTTCCTTCTCCTCGCTCGAGCACCTCTGGTGCTTCGGCCATGGATTTTGCTGCTGCAATGAGCCTCTTGCCTGGTTCCCCATCATCGGTCAATGTTATGTCTCCTTCACCATTTACTCCACCCATGTCTCCATCTGCCAATGGCATGTCACACTCATCTCTGGGTTGGCCCCAACCTAATGTCCCGGCCTTGCATCTGCCAGGTAGCAATCTTCAGTCTAGTCGCTTGAGATCTTCTCTTTGCGCAAGAGATATGCCTGCGGATGATTTTGATTTACTGCCAGAGTTTGATATGCAGCAACAGCAGCTGCAGCAACAGCAGCTACTAAATGAATTATCTTGCCTATCCCAACCATCTCTGAGTAATAATTCACTGAACCGTTCTGGTCGAAGGACAACCCTAACCCCCTCAAATCTTGATGATATCTTCTCTGCAGAGAGCTTATCACCCCGGTACTCTGATCAATCATTGCAATCAGGTGTTTTCTCCCCAACTCATAAATCAGCTGTTCTCAATCAATTTCAACACCAGCAGAGCATTCTTTCACCGATCCACACAACCTTTTCTCCAAAAACTGCTGATCATGCTCTATTGCAGGCCTCTTATGGGGGCCCATCATCTGGGAGGATGTCTCCACGGAATGTGGAACCTATCTCACCAATGGGCCCTCGAGTTTCGATGCTAGCTCAAAGAGAGAAGCAACAACAGTTTCGTAGCCTAAGTTCACGGGAACTCGGCTCCAATTCTGCATCCATTGTTGGTTCCTCTCCAAATTCTTGGTCAAAATGGGGATCCTCCAATGGAAAACCAGATTGGGCAGTTTCTACAGATGAATTGGGTAAGCTCCGCAGATCATCTTCTTTTGAGCTTGGGAACAATGGAGAGGAGCCAGATCTGTCATGGGTTCAGTCACTTGTTAAAGAATCTCCTACCGACATCAAAGAGAAGCAAACATCGAGCTCAGCTGTTACGGCCACTGGTTCCTCCAACAACGGTCCAAGTGCAAACTCCCAAAGGGAGGCGGTCGATCATGCTGTGTTGGGAGCATGGATTGACCAAATGCATCTTGATCTCGTGGCTCAGCAGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 zf-CCCH

Protein Analysis

737

Amino Acids

79.95

Weight (kDa)

6.16

Isoelectric Point (pI)

63.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	79 - 155	2.1e-11	Ankyrin repeats (3 copies)
Ank	PF00023	124 - 156	2.1e-06	Ankyrin repeat
zf-CCCH_AtC3H23	PF25512	262 - 295	6e-21	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003620)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41900
fragaria_vesca	FvH4_7g01060
malus_domestica	MD03G1175400.v1.1 MD12G1068100.v1.1 MD14G1068200.v1.1
prunus_persica	Prupe.4G248900_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1
pyrus_communis	pycom03g13290 pycom11g16880 pycom12g06010
rosa_chinensis	RchiOBHm_Chr1g0316051 RchiOBHm_Chr3g0481371
rosa_laevigata	RLG00000023402 RLG00000030707
rosa_multiflora	Rmu_sc0000064.1_g000020 Rmu_sc0002014.1_g000008 Rmu_sc0002531.1_g000041
rosa_roxburghii	Rroxscaffold_6G00400470
rosa_rugosa	Rorug01G0008400 Rorug01G0008400 Rorug01G0008500 Rorug03G0191500 Rorug03G0191600
rosa_samantha	Rh1AG018800 Rh1BG012300 Rh1CG016100 Rh1DG012500 Rh3AG242500 Rh3BG277500 Rh3CG272500 Rh3DG269400
rosa_wichuraiana	Rw1G001200 Rw3G021670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1363
AccB7I	CCANNNNNTGG	2 cut(s)	641, 1739
AccI	GTMKAC	1 cut(s)	73
AciI	CCGC	4 cut(s)	44, 1379, 1966, 2141
AclWI	GGATC	7 cut(s)	19, 446, 884, 897, 1663, 1905, 1918
AcoI	YGGCCR	2 cut(s)	1155, 2091
AcsI	RAATTY	2 cut(s)	899, 1891
AcuI	CTGAAG	3 cut(s)	135, 378, 1316
AcvI	CACGTG	1 cut(s)	824
AfaI	GTAC	3 cut(s)	562, 1039, 1574
AfiI	CCNNNNNNNGG	7 cut(s)	277, 641, 868, 1204, 1725, 1739, 2137
AgsI	TTSAA	5 cut(s)	110, 609, 777, 805, 1643
AjiI	CACGTC	1 cut(s)	953
AjnI	CCWGG	4 cut(s)	348, 865, 1189, 1318
AjuI	GAANNNNNNNTTGG	2 cut(s)	1915, 1947
Alw21I	GWGCWC	3 cut(s)	374, 1142, 2081
Alw26I	GTCTC	4 cut(s)	651, 1224, 1251, 1755
AlwI	GGATC	7 cut(s)	19, 446, 884, 897, 1663, 1905, 1918
AlwNI	CAGNNNCTG	1 cut(s)	1426
Ama87I	CYCGRG	2 cut(s)	1135, 1788
ApaI	GGGCCC	2 cut(s)	1733, 1787
ApoI	RAATTY	2 cut(s)	899, 1891
ArsI	GACNNNNNNTTYG	2 cut(s)	1883, 1915
Asp700I	GAANNNNTTC	1 cut(s)	796
AspA2I	CCTAGG	1 cut(s)	509
AspLEI	GCGC	1 cut(s)	1364
AspS9I	GGNCC	8 cut(s)	190, 1017, 1287, 1729, 1730, 1783, 1784, 2114
AsuC2I	CCSGG	2 cut(s)	1304, 1570
AsuHPI	GGTGA	6 cut(s)	581, 820, 1218, 1557, 1656, 1767
AsuNHI	GCTAGC	1 cut(s)	1801
AvaI	CYCGRG	2 cut(s)	1135, 1788
AvaII	GGWCC	3 cut(s)	190, 1017, 2114
AvrII	CCTAGG	1 cut(s)	509
BaeGI	GKGCMC	3 cut(s)	854, 1733, 1787
BamHI	GGATCC	2 cut(s)	889, 1910
BanII	GRGCYC	4 cut(s)	242, 1733, 1787, 2081
BauI	CACGAG	1 cut(s)	2192
BbrPI	CACGTG	1 cut(s)	824
Bbv12I	GWGCWC	3 cut(s)	374, 1142, 2081
BccI	CCATC	8 cut(s)	209, 244, 870, 1028, 1207, 1258, 1480, 1741
BceAI	ACGGC	1 cut(s)	2106
BciT130I	CCWGG	4 cut(s)	350, 867, 1191, 1320
BclI	TGATCA	2 cut(s)	1579, 1699
BcnI	CCSGG	2 cut(s)	1304, 1570
BcoDI	GTCTC	4 cut(s)	651, 1224, 1251, 1755
BfaI	CTAG	4 cut(s)	510, 536, 1338, 1802
BfmI	CTRYAG	3 cut(s)	1427, 1551, 1944
BglII	AGATCT	2 cut(s)	1349, 2011
BlnI	CCTAGG	1 cut(s)	509
BlpI	GCTNAGC	2 cut(s)	2080, 2199
Bme1390I	CCNGG	6 cut(s)	350, 867, 1191, 1304, 1320, 1570
Bme18I	GGWCC	3 cut(s)	190, 1017, 2114
BmeT110I	CYCGRG	2 cut(s)	1135, 1788
BmgBI	CACGTC	1 cut(s)	953
BmgT120I	GGNCC	8 cut(s)	190, 1017, 1287, 1729, 1730, 1783, 1784, 2114
BmrFI	CCNGG	6 cut(s)	350, 867, 1191, 1304, 1320, 1570
BmsI	GCATC	9 cut(s)	56, 109, 325, 457, 722, 1321, 1788, 1877, 2191
BmtI	GCTAGC	1 cut(s)	1805
BplI	GAGNNNNNCTC	6 cut(s)	361, 393, 1339, 1371, 1735, 1767
BpmI	CTGGAG	1 cut(s)	24
Bpu1102I	GCTNAGC	2 cut(s)	2080, 2199
BpuEI	CTTGAG	2 cut(s)	158, 1366
BpuMI	CCSGG	2 cut(s)	1304, 1570
Bsa29I	ATCGAT	1 cut(s)	204
BsaAI	YACGTR	1 cut(s)	824
BsaI	GGTCTC	1 cut(s)	651
BsaJI	CCNNGG	6 cut(s)	509, 866, 893, 1158, 1568, 1754
BsaXI	ACNNNNNCTCC	4 cut(s)	601, 631, 1669, 1699
Bsc4I	CCNNNNNNNGG	7 cut(s)	277, 641, 868, 1204, 1725, 1739, 2137
Bse1I	ACTGG	3 cut(s)	129, 1114, 2101
Bse3DI	GCAATG	3 cut(s)	13, 1182, 1586
BseBI	CCWGG	4 cut(s)	350, 867, 1191, 1320
BseCI	ATCGAT	1 cut(s)	204
BseDI	CCNNGG	6 cut(s)	509, 866, 893, 1158, 1568, 1754
BseGI	GGATG	5 cut(s)	862, 1039, 1387, 1752, 1868
BseLI	CCNNNNNNNGG	7 cut(s)	277, 641, 868, 1204, 1725, 1739, 2137
BseMI	GCAATG	3 cut(s)	13, 1182, 1586
BseMII	CTCAG	6 cut(s)	396, 837, 1022, 1102, 1469, 2094
BseNI	ACTGG	3 cut(s)	129, 1114, 2101
BseRI	GAGGAG	3 cut(s)	606, 1119, 2018
BseSI	GKGCMC	3 cut(s)	854, 1733, 1787
BseYI	CCCAGC	1 cut(s)	1003
Bsh1285I	CGRYCG	1 cut(s)	2145
BshVI	ATCGAT	1 cut(s)	204
BsiEI	CGRYCG	1 cut(s)	2145
BsiHKAI	GWGCWC	3 cut(s)	374, 1142, 2081
BsiHKCI	CYCGRG	2 cut(s)	1135, 1788
BsiSI	CCGG	2 cut(s)	1304, 1570
BslFI	GGGAC	1 cut(s)	1286
BslI	CCNNNNNNNGG	7 cut(s)	277, 641, 868, 1204, 1725, 1739, 2137
BsmAI	GTCTC	4 cut(s)	651, 1224, 1251, 1755
BsmFI	GGGAC	1 cut(s)	1286
BsmI	GAATGC	2 cut(s)	415, 1656
Bso31I	GGTCTC	1 cut(s)	651
BsoBI	CYCGRG	2 cut(s)	1135, 1788
Bsp120I	GGGCCC	2 cut(s)	1729, 1783
Bsp1286I	GDGCHC	7 cut(s)	242, 374, 854, 1142, 1733, 1787, 2081
Bsp1720I	GCTNAGC	2 cut(s)	2080, 2199
Bsp19I	CCATGG	1 cut(s)	1158
BspACI	CCGC	4 cut(s)	44, 1379, 1966, 2141
BspCNI	CTCAG	6 cut(s)	397, 838, 1021, 1101, 1470, 2093
BspDI	ATCGAT	1 cut(s)	204
BspHI	TCATGA	2 cut(s)	309, 835
BspMAI	CTGCAG	2 cut(s)	1431, 1555
BspOI	GCTAGC	1 cut(s)	1805
BspPI	GGATC	7 cut(s)	19, 446, 884, 897, 1663, 1905, 1918
BspQI	GCTCTTC	1 cut(s)	384
BspTNI	GGTCTC	1 cut(s)	651
BsrDI	GCAATG	3 cut(s)	13, 1182, 1586
BsrI	ACTGG	3 cut(s)	129, 1114, 2101
BssECI	CCNNGG	6 cut(s)	509, 866, 893, 1158, 1568, 1754
BssSI	CACGAG	1 cut(s)	2192
BssT1I	CCWWGG	3 cut(s)	509, 893, 1158
Bst2BI	CACGAG	1 cut(s)	2192
Bst2UI	CCWGG	4 cut(s)	350, 867, 1191, 1320
Bst4CI	ACNGT	9 cut(s)	106, 296, 386, 476, 586, 624, 1499, 1827, 2114
Bst6I	CTCTTC	3 cut(s)	384, 712, 753
BstBAI	YACGTR	1 cut(s)	824
BstC8I	GCNNGC	6 cut(s)	144, 946, 995, 1377, 1716, 1803
BstDEI	CTNAG	8 cut(s)	405, 846, 1008, 1088, 1478, 1838, 2080, 2199
BstDSI	CCRYGG	2 cut(s)	1158, 1754
BstF5I	GGATG	5 cut(s)	862, 1039, 1387, 1752, 1868
BstHHI	GCGC	1 cut(s)	1364
BstMAI	GTCTC	4 cut(s)	651, 1224, 1251, 1755
BstMCI	CGRYCG	1 cut(s)	2145
BstMWI	GCNNNNNNNGC	8 cut(s)	410, 1420, 1423, 1429, 1435, 1438, 1703, 2090
BstNI	CCWGG	4 cut(s)	350, 867, 1191, 1320
BstNSI	RCATGY	1 cut(s)	1267
BstSCI	CCNGG	6 cut(s)	348, 865, 1189, 1302, 1318, 1568
BstSFI	CTRYAG	3 cut(s)	1427, 1551, 1944
BstSLI	GKGCMC	3 cut(s)	854, 1733, 1787
BstX2I	RGATCY	4 cut(s)	889, 1349, 1910, 2011
BstXI	CCANNNNNNTGG	2 cut(s)	356, 1896
BstYI	RGATCY	4 cut(s)	889, 1349, 1910, 2011
Bsu15I	ATCGAT	1 cut(s)	204
BsuTUI	ATCGAT	1 cut(s)	204
BtgI	CCRYGG	2 cut(s)	1158, 1754
BtrI	CACGTC	1 cut(s)	953
BtsCI	GGATG	5 cut(s)	862, 1039, 1387, 1752, 1868
BtsI	GCAGTG	1 cut(s)	372
BtsIMutI	CAGTG	5 cut(s)	372, 382, 620, 1490, 2094
Cac8I	GCNNGC	6 cut(s)	144, 946, 995, 1377, 1716, 1803
CaiI	CAGNNNCTG	1 cut(s)	1426
CciI	TCATGA	2 cut(s)	309, 835
CfoI	GCGC	1 cut(s)	1364
Cfr13I	GGNCC	8 cut(s)	190, 1017, 1287, 1729, 1730, 1783, 1784, 2114
ClaI	ATCGAT	1 cut(s)	204
Csp6I	GTAC	3 cut(s)	561, 1038, 1573
CviQI	GTAC	3 cut(s)	561, 1038, 1573
DdeI	CTNAG	8 cut(s)	405, 846, 1008, 1088, 1478, 1838, 2080, 2199
DraI	TTTAAA	1 cut(s)	172
EaeI	YGGCCR	2 cut(s)	1155, 2091
Eam1104I	CTCTTC	3 cut(s)	384, 712, 753
EarI	CTCTTC	3 cut(s)	384, 712, 753
Ecl136II	GAGCTC	1 cut(s)	2079
Eco130I	CCWWGG	3 cut(s)	509, 893, 1158
Eco147I	AGGCCT	3 cut(s)	353, 814, 1718
Eco24I	GRGCYC	4 cut(s)	242, 1733, 1787, 2081
Eco31I	GGTCTC	1 cut(s)	651
Eco32I	GATATC	1 cut(s)	1543
Eco47I	GGWCC	3 cut(s)	190, 1017, 2114
Eco53kI	GAGCTC	1 cut(s)	2079
Eco57I	CTGAAG	3 cut(s)	135, 378, 1316
Eco72I	CACGTG	1 cut(s)	824
Eco88I	CYCGRG	2 cut(s)	1135, 1788
EcoICRI	GAGCTC	1 cut(s)	2079
EcoO109I	RGGNCCY	3 cut(s)	190, 1729, 1784
EcoRII	CCWGG	4 cut(s)	348, 865, 1189, 1318
EcoRV	GATATC	1 cut(s)	1543
EcoT14I	CCWWGG	3 cut(s)	509, 893, 1158
EcoT22I	ATGCAT	1 cut(s)	2184
EcoT38I	GRGCYC	4 cut(s)	242, 1733, 1787, 2081
ErhI	CCWWGG	3 cut(s)	509, 893, 1158
FalI	AAGNNNNNCTT	2 cut(s)	531, 563
FaqI	GGGAC	1 cut(s)	1286
FbaI	TGATCA	2 cut(s)	1579, 1699
FblI	GTMKAC	1 cut(s)	73
FokI	GGATG	5 cut(s)	849, 1046, 1394, 1759, 1855
FriOI	GRGCYC	4 cut(s)	242, 1733, 1787, 2081
FspBI	CTAG	4 cut(s)	510, 536, 1338, 1802
FspI	TGCGCA	1 cut(s)	1363
GlaI	GCGC	1 cut(s)	1363
GsaI	CCCAGC	1 cut(s)	1007
GsuI	CTGGAG	1 cut(s)	24
HapII	CCGG	2 cut(s)	1304, 1570
HhaI	GCGC	1 cut(s)	1364
Hin6I	GCGC	1 cut(s)	1362
HinP1I	GCGC	1 cut(s)	1362
HincII	GTYRAC	3 cut(s)	64, 591, 739
HindII	GTYRAC	3 cut(s)	64, 591, 739
HinfI	GANTC	4 cut(s)	75, 94, 1056, 2042
HpaII	CCGG	2 cut(s)	1304, 1570
HphI	GGTGA	6 cut(s)	581, 820, 1218, 1557, 1656, 1767
Hpy166II	GTNNAC	8 cut(s)	64, 74, 134, 346, 591, 739, 821, 1844
Hpy188I	TCNGA	9 cut(s)	16, 234, 334, 718, 791, 935, 1017, 1479, 1579
Hpy188III	TCNNGA	8 cut(s)	310, 536, 752, 760, 836, 926, 1535, 2186
Hpy8I	GTNNAC	8 cut(s)	64, 74, 134, 346, 591, 739, 821, 1844
HpyAV	CCTTC	8 cut(s)	204, 229, 660, 718, 879, 1134, 1233, 1503
HpyCH4III	ACNGT	9 cut(s)	106, 296, 386, 476, 586, 624, 1499, 1827, 2114
HpyCH4IV	ACGT	2 cut(s)	823, 952
HpyF10VI	GCNNNNNNNGC	8 cut(s)	410, 1420, 1423, 1429, 1435, 1438, 1703, 2090
HpyF3I	CTNAG	8 cut(s)	405, 846, 1008, 1088, 1478, 1838, 2080, 2199
HpySE526I	ACGT	2 cut(s)	823, 952
HspAI	GCGC	1 cut(s)	1362
Ksp22I	TGATCA	2 cut(s)	1579, 1699
LguI	GCTCTTC	1 cut(s)	384
LmnI	GCTCC	6 cut(s)	369, 440, 1862, 1968, 2005, 2162
LweI	GCATC	9 cut(s)	56, 109, 325, 457, 722, 1321, 1788, 1877, 2191
MaeI	CTAG	4 cut(s)	510, 536, 1338, 1802
MaeII	ACGT	2 cut(s)	823, 952
MaeIII	GTNAC	3 cut(s)	1266, 2028, 2086
MfeI	CAATTG	1 cut(s)	180
MflI	RGATCY	4 cut(s)	889, 1349, 1910, 2011
MhlI	GDGCHC	7 cut(s)	242, 374, 854, 1142, 1733, 1787, 2081
MlyI	GAGTC	2 cut(s)	69, 1065
MmeI	TCCRAC	1 cut(s)	2130
Mph1103I	ATGCAT	1 cut(s)	2184
MroXI	GAANNNNTTC	1 cut(s)	796
MseI	TTAA	4 cut(s)	171, 255, 275, 2037
MspA1I	CMGCKG	4 cut(s)	44, 1426, 1625, 2084
MspI	CCGG	2 cut(s)	1304, 1570
MspR9I	CCNGG	6 cut(s)	350, 867, 1191, 1304, 1320, 1570
MunI	CAATTG	1 cut(s)	180
Mva1269I	GAATGC	2 cut(s)	415, 1656
MvaI	CCWGG	4 cut(s)	350, 867, 1191, 1320
MwoI	GCNNNNNNNGC	8 cut(s)	410, 1420, 1423, 1429, 1435, 1438, 1703, 2090
NciI	CCSGG	2 cut(s)	1304, 1570
NcoI	CCATGG	1 cut(s)	1158
NheI	GCTAGC	1 cut(s)	1801
NmeAIII	GCCGAG	1 cut(s)	1833
NmuCI	GTSAC	2 cut(s)	1266, 2028
NsbI	TGCGCA	1 cut(s)	1363
NsiI	ATGCAT	1 cut(s)	2184
NspI	RCATGY	1 cut(s)	1267
PaeR7I	CTCGAG	2 cut(s)	1135, 1788
PagI	TCATGA	2 cut(s)	309, 835
PceI	AGGCCT	3 cut(s)	353, 814, 1718
PciSI	GCTCTTC	1 cut(s)	384
PcsI	WCGNNNNNNNCGW	1 cut(s)	590
PctI	GAATGC	2 cut(s)	415, 1656
PdmI	GAANNNNTTC	1 cut(s)	796
PfeI	GAWTC	2 cut(s)	94, 2042
PflMI	CCANNNNNTGG	2 cut(s)	641, 1739
PleI	GAGTC	2 cut(s)	69, 1064
PmaCI	CACGTG	1 cut(s)	824
PmlI	CACGTG	1 cut(s)	824
PpsI	GAGTC	2 cut(s)	69, 1064
Ppu21I	YACGTR	1 cut(s)	824
PpuMI	RGGWCCY	1 cut(s)	190
Psp124BI	GAGCTC	1 cut(s)	2081
Psp5II	RGGWCCY	1 cut(s)	190
Psp6I	CCWGG	4 cut(s)	348, 865, 1189, 1318
PspCI	CACGTG	1 cut(s)	824
PspFI	CCCAGC	1 cut(s)	1003
PspGI	CCWGG	4 cut(s)	348, 865, 1189, 1318
PspOMI	GGGCCC	2 cut(s)	1729, 1783
PspPI	GGNCC	8 cut(s)	190, 1017, 1287, 1729, 1730, 1783, 1784, 2114
PspPPI	RGGWCCY	1 cut(s)	190
PspXI	VCTCGAGB	2 cut(s)	1135, 1788
PsrI	GAACNNNNNNTAC	2 cut(s)	1825, 1857
PstI	CTGCAG	2 cut(s)	1431, 1555
PstNI	CAGNNNCTG	1 cut(s)	1426
PsuI	RGATCY	4 cut(s)	889, 1349, 1910, 2011
PvuII	CAGCTG	3 cut(s)	1426, 1625, 2084
RsaI	GTAC	3 cut(s)	562, 1039, 1574
RsaNI	GTAC	3 cut(s)	561, 1038, 1573
SacI	GAGCTC	1 cut(s)	2081
SapI	GCTCTTC	1 cut(s)	384
SaqAI	TTAA	4 cut(s)	171, 255, 275, 2037
Sau96I	GGNCC	8 cut(s)	190, 1017, 1287, 1729, 1730, 1783, 1784, 2114
SchI	GAGTC	2 cut(s)	69, 1065
ScrFI	CCNGG	6 cut(s)	350, 867, 1191, 1304, 1320, 1570
SduI	GDGCHC	7 cut(s)	242, 374, 854, 1142, 1733, 1787, 2081
SfaNI	GCATC	9 cut(s)	56, 109, 325, 457, 722, 1321, 1788, 1877, 2191
SfcI	CTRYAG	3 cut(s)	1427, 1551, 1944
Sfr274I	CTCGAG	2 cut(s)	1135, 1788
SinI	GGWCC	3 cut(s)	190, 1017, 2114
SlaI	CTCGAG	2 cut(s)	1135, 1788
SmlI	CTYRAG	4 cut(s)	137, 1135, 1345, 1788
SmoI	CTYRAG	4 cut(s)	137, 1135, 1345, 1788
SseBI	AGGCCT	3 cut(s)	353, 814, 1718
SsiI	CCGC	4 cut(s)	44, 1379, 1966, 2141
SspMI	CTAG	4 cut(s)	510, 536, 1338, 1802
SstI	GAGCTC	1 cut(s)	2081
StuI	AGGCCT	3 cut(s)	353, 814, 1718
StyD4I	CCNGG	6 cut(s)	348, 865, 1189, 1302, 1318, 1568
StyI	CCWWGG	3 cut(s)	509, 893, 1158
TaaI	ACNGT	9 cut(s)	106, 296, 386, 476, 586, 624, 1499, 1827, 2114
TaiI	ACGT	2 cut(s)	826, 955
TaqI	TCGA	8 cut(s)	204, 686, 1136, 1507, 1789, 1796, 2075, 2145
TaqII	GACCGA	1 cut(s)	1195
TauI	GCSGC	1 cut(s)	47
TfiI	GAWTC	2 cut(s)	94, 2042
Tru1I	TTAA	4 cut(s)	171, 255, 275, 2037
Tru9I	TTAA	4 cut(s)	171, 255, 275, 2037
TscAI	CASTG	5 cut(s)	379, 389, 627, 1497, 2101
TseFI	GTSAC	2 cut(s)	1266, 2028
Tsp45I	GTSAC	2 cut(s)	1266, 2028
TspDTI	ATGAA	6 cut(s)	107, 326, 789, 893, 1464, 1965
TspGWI	ACGGA	1 cut(s)	1771
TspRI	CASTG	5 cut(s)	379, 389, 627, 1497, 2101
Van91I	CCANNNNNTGG	2 cut(s)	641, 1739
VpaK11BI	GGWCC	3 cut(s)	190, 1017, 2114
XapI	RAATTY	2 cut(s)	899, 1891
XbaI	TCTAGA	1 cut(s)	535
XceI	RCATGY	1 cut(s)	1267
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2016
XhoI	CTCGAG	2 cut(s)	1135, 1788
XmaJI	CCTAGG	1 cut(s)	509
XmiI	GTMKAC	1 cut(s)	73
XmnI	GAANNNNTTC	1 cut(s)	796
XspI	CTAG	4 cut(s)	510, 536, 1338, 1802
Zsp2I	ATGCAT	1 cut(s)	2184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.