Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0003620

Physical Location & Seq

Genomic Coordinates Reverse (-)

27214312 .. 27218954

Gene Structure 4643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG277500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGTGCTATGGATCAGAGCGGGTAAAACCCTGTTCATCTTCAGCAGCATCTCCCATCGTTGACGAACACTTTAACACAACAACCATGAATCACTTGACAGTTGAAACTGAAGATACTTTTGCCAGCTTACTTGAACTTGCAGCAAACAATGACATTGAGAGCTTCAGACGATCGATACAGCACAATCCTTCTGCCATCGATGAGATTGGCTTATGGTATTGTCGTCAGAAGGGCTCAAAGCAGATGGTTAATGAGCACAGAACCCCTTTAATGGTTGCCGCTACATATGGTAGTAATGATGTCATAAAGCTGATTCTTTCTCTCTCTGATGCTGATGTAAATCAGACCTGTGGTAATGATAGAAGCACTGCTCTACACTGCGCTGCTTCAGGTGGTGCTGAGAATGCTGTCGATACTGTGAGGCTGCTTTTAGCTGCTGGTGCTGATCCTAATTTGATTGATGCAAATGGTCATCGTCCTGTTGATGTTATAGTTGTTCCTCCTAGGCTCCAGAATGTCAGATTAGCTCTTGAAGAACTCCTTATGATTAACAGTTCTGTTGGTGAACAAATTTTCTCAGTCTCAACAAGAGCCCTTTCTCCTCCTCTATCAACTTCTCCAGACAATGGGTCTCCATCAGCTTTAGATTTCACTTGTTCTCCGACAAAGTCGAAGTTCTATAATATTACTGTTTCTTCTGCATCAGAGAAGAAGGAATACCCTGTTGACCCCTCTCTCCCAGACATCAAGAACAGTATTTATTCAACTGATGAATTCCGTATGTATTCATTCAAGGTGAGGCCTTGTTCACGTGCCTACTCCCATGATTGGACTGAGTGCCCTTTTGTCCATCCTGGAGAAAATGCACGAAGAAGGGATCCAAGGAAGTTCCATTACAGCTGTGTTCCTTGCCCTGACTTCCGAAAAGGGGCTTGCAGGCGTGGAGATATGTGTGAATATGCTCATGGGGTTTTTGAGTGTTGGCTACACCCAGCTCAATATCGAACCCGACTCTGCAAGGATGGTACAAGTTGTGCGAGGAGAGTCTGCTTTTTTGCCCACACAGCAGAGGAACTCAGGCCATTGTATGTCTCTACTGGTTCTGCTGTTCCTTCTCCTCGCTCGACCACTTCCGGTGCTTCAGCCATGGATTTTGCTGCTGCAATGAGCCTCTTGCCTGGTTCTCCTTCATCACTCTCTGCCATGTCTCCTTCACCATTTACTCCACCCATGTCTCCCTCTGGCAATGGCATGTCACACTCTTCTGTAGCTTGGCCCCAACCTAATGTCCCGGCTCTGCATCTCCCAGGCAGCAATATTCAGTCTAGTCGCTTGAGATCTTCCCTTTGTGCAAGAGATATGGCAGCAGATGACTTTGATTTACTGCCAGAGTTTGATATGCAGCAACAGCAGCTCCTAAATGAATTATCTATGAGTAATTCACTGAACCGTTCTGGTCGGTTGAATACCTTAACACCCTCAAATCTGGATGATCTCTTTTCTGCTGAGAACTTATCTCCTCGCTACTCTGATCAAGCATTGGCATCAGCTGTTTTCTCCCCAACTCACAAGTCAGCTCTTCTCAATCAGTTTCAGCAGCAACAGAGCATGCTTTCACCAATCCATACAAACTTTTCGCCCAAAACTACTGTTGATCACCCTCTATTGCAGGCTCCCTTTGGAGCACCACCATCCTCTGGGAGGATGTCGCCCCGAAATGTGGAACCTATCTCACCAATGGGCTCTCGGGTTTCCATGCTAGGTCAACGGGAGAAGCAACAGTTTCGTAGCCTTAGTTCACGGGAGCTTGGCTCCAGCTCCACTTCCAATATTGGTTCCCCTGCAAATTCTTGGTCAAAATGGGGATCGTCTGATGGAAAACCAGATTGGGCAGTTACTTCAGATGAATTGGGAAAGCTACGCAGATCATCTTCATTTGAGCTGGGGAACAATGGAGAGGAACCAGATCTTTCGTGGGTTCAGTCACTTGTTAGAGAATCTCCTACTGAAATCAAAGAAAAGCTAACAACACCCGTCTCAGGTGTTGCGGCCACTGGATCCTCCAATGACGGTTTAAGTGCAAACTCCCAAATGGAATCGGTTGATCATGCGGCAATGGGAGCTTGGATTGACCAACTACATCTTGATCTTGTGGCTCAGCAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 zf-CCCH

Protein Analysis

722

Amino Acids

78.58

Weight (kDa)

5.9

Isoelectric Point (pI)

58.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	80 - 154	3.8e-11	Ankyrin repeats (3 copies)
Ank	PF00023	122 - 154	6.1e-06	Ankyrin repeat
zf-CCCH_AtC3H23	PF25512	258 - 291	5.9e-21	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003620)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41900
fragaria_vesca	FvH4_7g01060
malus_domestica	MD03G1175400.v1.1 MD12G1068100.v1.1 MD14G1068200.v1.1
prunus_persica	Prupe.4G248900_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1
pyrus_communis	pycom03g13290 pycom11g16880 pycom12g06010
rosa_chinensis	RchiOBHm_Chr1g0316051 RchiOBHm_Chr3g0481371
rosa_laevigata	RLG00000023402 RLG00000030707
rosa_multiflora	Rmu_sc0000064.1_g000020 Rmu_sc0002014.1_g000008 Rmu_sc0002531.1_g000041
rosa_roxburghii	Rroxscaffold_6G00400470
rosa_rugosa	Rorug01G0008400 Rorug01G0008400 Rorug01G0008500 Rorug03G0191500 Rorug03G0191600
rosa_samantha	Rh1AG018800 Rh1BG012300 Rh1CG016100 Rh1DG012500 Rh3AG242500 Rh3BG277500 Rh3CG272500 Rh3DG269400
rosa_wichuraiana	Rw1G001200 Rw3G021670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	626, 1697
AccBSI	CCGCTC	1 cut(s)	19
AciI	CCGC	4 cut(s)	19, 279, 2048, 2111
AclWI	GGATC	7 cut(s)	19, 440, 872, 885, 1873, 2052, 2065
AcoI	YGGCCR	1 cut(s)	2049
AcsI	RAATTY	3 cut(s)	570, 773, 1846
AcuI	CTGAAG	6 cut(s)	24, 129, 148, 372, 1125, 1884
AcvI	CACGTG	1 cut(s)	812
AfaI	GTAC	1 cut(s)	1027
AfiI	CCNNNNNNNGG	8 cut(s)	271, 626, 828, 928, 1697, 1701, 1720, 2039
AgsI	TTSAA	6 cut(s)	104, 134, 533, 765, 793, 1465
AhdI	GACNNNNNGTC	1 cut(s)	628
AjnI	CCWGG	3 cut(s)	853, 1177, 1306
AjuI	GAANNNNNNNTTGG	2 cut(s)	1870, 1902
Alw21I	GWGCWC	2 cut(s)	258, 1687
Alw26I	GTCTC	6 cut(s)	586, 636, 1096, 1212, 1239, 2041
AlwI	GGATC	7 cut(s)	19, 440, 872, 885, 1873, 2052, 2065
Ama87I	CYCGRG	1 cut(s)	1746
AoxI	GGCC	4 cut(s)	800, 1079, 1274, 2049
ApoI	RAATTY	3 cut(s)	570, 773, 1846
ArsI	GACNNNNNNTTYG	2 cut(s)	1838, 1870
AspA2I	CCTAGG	1 cut(s)	503
AspLEI	GCGC	1 cut(s)	383
AspS9I	GGNCC	1 cut(s)	1275
AsuC2I	CCSGG	1 cut(s)	1292
AsuHPI	GGTGA	6 cut(s)	575, 808, 1206, 1608, 1649, 1725
AvaI	CYCGRG	1 cut(s)	1746
AvrII	CCTAGG	1 cut(s)	503
BaeGI	GKGCMC	1 cut(s)	842
BamHI	GGATCC	2 cut(s)	877, 2057
BanII	GRGCYC	3 cut(s)	236, 595, 1745
BarI	GAAGNNNNNNTAC	4 cut(s)	701, 733, 878, 910
BbrPI	CACGTG	1 cut(s)	812
Bbv12I	GWGCWC	2 cut(s)	258, 1687
BccI	CCATC	8 cut(s)	62, 203, 238, 643, 858, 1016, 1699, 1868
BcgI	CGANNNNNNTGC	2 cut(s)	1766, 1800
BciT130I	CCWGG	3 cut(s)	855, 1179, 1308
BclI	TGATCA	3 cut(s)	1531, 1654, 2104
BcnI	CCSGG	1 cut(s)	1292
BcoDI	GTCTC	6 cut(s)	586, 636, 1096, 1212, 1239, 2041
BfaI	CTAG	3 cut(s)	504, 1326, 1760
BfmI	CTRYAG	1 cut(s)	1266
BglII	AGATCT	2 cut(s)	1337, 1966
BlnI	CCTAGG	1 cut(s)	503
BlpI	GCTNAGC	1 cut(s)	2157
Bme1390I	CCNGG	4 cut(s)	855, 1179, 1292, 1308
BmeRI	GACNNNNNGTC	1 cut(s)	628
BmeT110I	CYCGRG	1 cut(s)	1746
BmgT120I	GGNCC	1 cut(s)	1275
BmiI	GGNNCC	9 cut(s)	509, 879, 1277, 1674, 1725, 1813, 1837, 1962, 2059
BmrFI	CCNGG	4 cut(s)	855, 1179, 1292, 1308
BmsI	GCATC	6 cut(s)	56, 319, 451, 710, 1309, 1553
BplI	GAGNNNNNCTC	2 cut(s)	1796, 1828
BpmI	CTGGAG	4 cut(s)	494, 603, 876, 1798
Bpu1102I	GCTNAGC	1 cut(s)	2157
BpuEI	CTTGAG	1 cut(s)	1354
BpuMI	CCSGG	1 cut(s)	1292
Bsa29I	ATCGAT	2 cut(s)	173, 198
BsaAI	YACGTR	1 cut(s)	812
BsaBI	GATNNNNATC	1 cut(s)	339
BsaI	GGTCTC	1 cut(s)	636
BsaJI	CCNNGG	4 cut(s)	503, 881, 1146, 1306
BsaWI	WCCGGW	1 cut(s)	1133
BsaXI	ACNNNNNCTCC	4 cut(s)	643, 673, 1398, 1428
Bsc4I	CCNNNNNNNGG	8 cut(s)	271, 626, 828, 928, 1697, 1701, 1720, 2039
Bse1I	ACTGG	2 cut(s)	1102, 2059
Bse3DI	GCAATG	3 cut(s)	1170, 1252, 2121
Bse8I	GATNNNNATC	1 cut(s)	339
BseBI	CCWGG	3 cut(s)	855, 1179, 1308
BseCI	ATCGAT	2 cut(s)	173, 198
BseDI	CCNNGG	4 cut(s)	503, 881, 1146, 1306
BseGI	GGATG	5 cut(s)	850, 1027, 1495, 1691, 1710
BseJI	GATNNNNATC	1 cut(s)	339
BseLI	CCNNNNNNNGG	8 cut(s)	271, 626, 828, 928, 1697, 1701, 1720, 2039
BseMI	GCAATG	3 cut(s)	1170, 1252, 2121
BseMII	CTCAG	6 cut(s)	390, 591, 825, 1090, 1497, 2052
BseNI	ACTGG	2 cut(s)	1102, 2059
BseRI	GAGGAG	5 cut(s)	591, 594, 1054, 1107, 1509
BseSI	GKGCMC	1 cut(s)	842
BseYI	CCCAGC	2 cut(s)	991, 1942
Bsh1285I	CGRYCG	1 cut(s)	173
BshFI	GGCC	4 cut(s)	802, 1081, 1276, 2051
BshVI	ATCGAT	2 cut(s)	173, 198
BsiEI	CGRYCG	1 cut(s)	173
BsiHKAI	GWGCWC	2 cut(s)	258, 1687
BsiHKCI	CYCGRG	1 cut(s)	1746
BsiSI	CCGG	2 cut(s)	1134, 1292
BslFI	GGGAC	1 cut(s)	1274
BslI	CCNNNNNNNGG	8 cut(s)	271, 626, 828, 928, 1697, 1701, 1720, 2039
BsmAI	GTCTC	6 cut(s)	586, 636, 1096, 1212, 1239, 2041
BsmBI	CGTCTC	1 cut(s)	2041
BsmFI	GGGAC	1 cut(s)	1274
BsmI	GAATGC	1 cut(s)	409
BsnI	GGCC	4 cut(s)	802, 1081, 1276, 2051
Bso31I	GGTCTC	1 cut(s)	636
BsoBI	CYCGRG	1 cut(s)	1746
Bsp1286I	GDGCHC	6 cut(s)	236, 258, 595, 842, 1687, 1745
Bsp1720I	GCTNAGC	1 cut(s)	2157
Bsp19I	CCATGG	1 cut(s)	1146
BspACI	CCGC	4 cut(s)	19, 279, 2048, 2111
BspANI	GGCC	4 cut(s)	802, 1081, 1276, 2051
BspCNI	CTCAG	6 cut(s)	391, 590, 826, 1089, 1498, 2051
BspDI	ATCGAT	2 cut(s)	173, 198
BspLI	GGNNCC	9 cut(s)	509, 879, 1277, 1674, 1725, 1813, 1837, 1962, 2059
BspPI	GGATC	7 cut(s)	19, 440, 872, 885, 1873, 2052, 2065
BspQI	GCTCTTC	1 cut(s)	1584
BspTNI	GGTCTC	1 cut(s)	636
BsrBI	CCGCTC	1 cut(s)	19
BsrDI	GCAATG	3 cut(s)	1170, 1252, 2121
BsrI	ACTGG	2 cut(s)	1102, 2059
BssECI	CCNNGG	4 cut(s)	503, 881, 1146, 1306
BssT1I	CCWWGG	3 cut(s)	503, 881, 1146
Bst2UI	CCWGG	3 cut(s)	855, 1179, 1308
Bst4CI	ACNGT	9 cut(s)	100, 418, 554, 691, 755, 1451, 1651, 1782, 2072
Bst6I	CTCTTC	2 cut(s)	1267, 1584
BstBAI	YACGTR	1 cut(s)	812
BstC8I	GCNNGC	5 cut(s)	124, 934, 938, 1610, 1671
BstDEI	CTNAG	8 cut(s)	399, 577, 834, 1076, 1506, 1793, 2038, 2157
BstDSI	CCRYGG	1 cut(s)	1146
BstENI	CCTNNNNNAGG	1 cut(s)	1699
BstF5I	GGATG	5 cut(s)	850, 1027, 1495, 1691, 1710
BstHHI	GCGC	1 cut(s)	383
BstMAI	GTCTC	6 cut(s)	586, 636, 1096, 1212, 1239, 2041
BstMCI	CGRYCG	1 cut(s)	173
BstMWI	GCNNNNNNNGC	6 cut(s)	404, 440, 1064, 1408, 1411, 2120
BstNI	CCWGG	3 cut(s)	855, 1179, 1308
BstNSI	RCATGY	2 cut(s)	1255, 1612
BstSCI	CCNGG	4 cut(s)	853, 1177, 1290, 1306
BstSFI	CTRYAG	1 cut(s)	1266
BstSLI	GKGCMC	1 cut(s)	842
BstX2I	RGATCY	4 cut(s)	877, 1337, 1966, 2057
BstYI	RGATCY	4 cut(s)	877, 1337, 1966, 2057
Bsu15I	ATCGAT	2 cut(s)	173, 198
BsuRI	GGCC	4 cut(s)	802, 1081, 1276, 2051
BsuTUI	ATCGAT	2 cut(s)	173, 198
BtgI	CCRYGG	1 cut(s)	1146
BtsCI	GGATG	5 cut(s)	850, 1027, 1495, 1691, 1710
BtsI	GCAGTG	2 cut(s)	366, 376
BtsIMutI	CAGTG	4 cut(s)	366, 376, 1442, 2052
Cac8I	GCNNGC	5 cut(s)	124, 934, 938, 1610, 1671
CfoI	GCGC	1 cut(s)	383
Cfr13I	GGNCC	1 cut(s)	1275
ClaI	ATCGAT	2 cut(s)	173, 198
Csp6I	GTAC	1 cut(s)	1026
CviQI	GTAC	1 cut(s)	1026
DdeI	CTNAG	8 cut(s)	399, 577, 834, 1076, 1506, 1793, 2038, 2157
DriI	GACNNNNNGTC	1 cut(s)	628
EaeI	YGGCCR	1 cut(s)	2049
Eam1104I	CTCTTC	2 cut(s)	1267, 1584
Eam1105I	GACNNNNNGTC	1 cut(s)	628
EarI	CTCTTC	2 cut(s)	1267, 1584
Eco130I	CCWWGG	3 cut(s)	503, 881, 1146
Eco147I	AGGCCT	1 cut(s)	802
Eco24I	GRGCYC	3 cut(s)	236, 595, 1745
Eco31I	GGTCTC	1 cut(s)	636
Eco57I	CTGAAG	6 cut(s)	24, 129, 148, 372, 1125, 1884
Eco72I	CACGTG	1 cut(s)	812
Eco88I	CYCGRG	1 cut(s)	1746
EcoNI	CCTNNNNNAGG	1 cut(s)	1699
EcoRI	GAATTC	1 cut(s)	773
EcoRII	CCWGG	3 cut(s)	853, 1177, 1306
EcoT14I	CCWWGG	3 cut(s)	503, 881, 1146
EcoT38I	GRGCYC	3 cut(s)	236, 595, 1745
ErhI	CCWWGG	3 cut(s)	503, 881, 1146
Esp3I	CGTCTC	1 cut(s)	2041
FalI	AAGNNNNNCTT	2 cut(s)	525, 557
FaqI	GGGAC	1 cut(s)	1274
FauI	CCCGC	1 cut(s)	12
FauNDI	CATATG	1 cut(s)	286
FbaI	TGATCA	3 cut(s)	1531, 1654, 2104
FokI	GGATG	5 cut(s)	837, 1034, 1502, 1678, 1717
FriOI	GRGCYC	3 cut(s)	236, 595, 1745
FspBI	CTAG	3 cut(s)	504, 1326, 1760
GlaI	GCGC	1 cut(s)	382
GsaI	CCCAGC	2 cut(s)	995, 1946
GsuI	CTGGAG	4 cut(s)	494, 603, 876, 1798
HaeIII	GGCC	4 cut(s)	802, 1081, 1276, 2051
HapII	CCGG	2 cut(s)	1134, 1292
HhaI	GCGC	1 cut(s)	383
Hin6I	GCGC	1 cut(s)	381
HinP1I	GCGC	1 cut(s)	381
HincII	GTYRAC	3 cut(s)	61, 727, 1766
HindII	GTYRAC	3 cut(s)	61, 727, 1766
HinfI	GANTC	6 cut(s)	88, 313, 1011, 1044, 1997, 2096
HpaII	CCGG	2 cut(s)	1134, 1292
HphI	GGTGA	6 cut(s)	575, 808, 1206, 1608, 1649, 1725
Hpy166II	GTNNAC	6 cut(s)	61, 566, 727, 809, 1766, 1799
Hpy188III	TCNNGA	6 cut(s)	511, 530, 620, 748, 1487, 2144
Hpy8I	GTNNAC	6 cut(s)	61, 566, 727, 809, 1766, 1799
HpyAV	CCTTC	7 cut(s)	198, 223, 706, 867, 1122, 1197, 1221
HpyCH4III	ACNGT	9 cut(s)	100, 418, 554, 691, 755, 1451, 1651, 1782, 2072
HpyCH4IV	ACGT	1 cut(s)	811
HpyF10VI	GCNNNNNNNGC	6 cut(s)	404, 440, 1064, 1408, 1411, 2120
HpyF3I	CTNAG	8 cut(s)	399, 577, 834, 1076, 1506, 1793, 2038, 2157
HpySE526I	ACGT	1 cut(s)	811
HspAI	GCGC	1 cut(s)	381
Ksp22I	TGATCA	3 cut(s)	1531, 1654, 2104
LguI	GCTCTTC	1 cut(s)	1584
LmnI	GCTCC	8 cut(s)	513, 1419, 1678, 1682, 1804, 1817, 1823, 2120
LweI	GCATC	6 cut(s)	56, 319, 451, 710, 1309, 1553
MaeI	CTAG	3 cut(s)	504, 1326, 1760
MaeII	ACGT	1 cut(s)	811
MaeIII	GTNAC	3 cut(s)	1254, 1894, 1983
MbiI	CCGCTC	1 cut(s)	19
MflI	RGATCY	4 cut(s)	877, 1337, 1966, 2057
MhlI	GDGCHC	6 cut(s)	236, 258, 595, 842, 1687, 1745
MluCI	AATT	7 cut(s)	451, 570, 773, 1424, 1438, 1846, 1907
MlyI	GAGTC	2 cut(s)	1005, 1053
MmeI	TCCRAC	1 cut(s)	686
MseI	TTAA	6 cut(s)	72, 249, 269, 549, 1472, 2075
MspA1I	CMGCKG	2 cut(s)	900, 1550
MspI	CCGG	2 cut(s)	1134, 1292
MspR9I	CCNGG	4 cut(s)	855, 1179, 1292, 1308
Mva1269I	GAATGC	1 cut(s)	409
MvaI	CCWGG	3 cut(s)	855, 1179, 1308
MwoI	GCNNNNNNNGC	6 cut(s)	404, 440, 1064, 1408, 1411, 2120
NciI	CCSGG	1 cut(s)	1292
NcoI	CCATGG	1 cut(s)	1146
NdeI	CATATG	1 cut(s)	286
NlaIV	GGNNCC	9 cut(s)	509, 879, 1277, 1674, 1725, 1813, 1837, 1962, 2059
NmuCI	GTSAC	2 cut(s)	1254, 1983
NspI	RCATGY	2 cut(s)	1255, 1612
PaeI	GCATGC	1 cut(s)	1612
PceI	AGGCCT	1 cut(s)	802
PciSI	GCTCTTC	1 cut(s)	1584
PctI	GAATGC	1 cut(s)	409
PfeI	GAWTC	4 cut(s)	88, 313, 1997, 2096
PflFI	GACNNNGTC	1 cut(s)	667
PflMI	CCANNNNNTGG	2 cut(s)	626, 1697
PfoI	TCCNGGA	1 cut(s)	853
Ple19I	CGATCG	1 cut(s)	173
PleI	GAGTC	2 cut(s)	1005, 1052
PmaCI	CACGTG	1 cut(s)	812
PmlI	CACGTG	1 cut(s)	812
PpsI	GAGTC	2 cut(s)	1005, 1052
Ppu21I	YACGTR	1 cut(s)	812
Psp6I	CCWGG	3 cut(s)	853, 1177, 1306
PspCI	CACGTG	1 cut(s)	812
PspFI	CCCAGC	2 cut(s)	991, 1942
PspGI	CCWGG	3 cut(s)	853, 1177, 1306
PspN4I	GGNNCC	9 cut(s)	509, 879, 1277, 1674, 1725, 1813, 1837, 1962, 2059
PspPI	GGNCC	1 cut(s)	1275
PsrI	GAACNNNNNNTAC	2 cut(s)	1780, 1812
PsuI	RGATCY	4 cut(s)	877, 1337, 1966, 2057
PsyI	GACNNNGTC	1 cut(s)	667
PvuI	CGATCG	1 cut(s)	173
PvuII	CAGCTG	2 cut(s)	900, 1550
RsaI	GTAC	1 cut(s)	1027
RsaNI	GTAC	1 cut(s)	1026
SapI	GCTCTTC	1 cut(s)	1584
SaqAI	TTAA	6 cut(s)	72, 249, 269, 549, 1472, 2075
Sau96I	GGNCC	1 cut(s)	1275
SchI	GAGTC	2 cut(s)	1005, 1053
ScrFI	CCNGG	4 cut(s)	855, 1179, 1292, 1308
SduI	GDGCHC	6 cut(s)	236, 258, 595, 842, 1687, 1745
SfaNI	GCATC	6 cut(s)	56, 319, 451, 710, 1309, 1553
SfcI	CTRYAG	1 cut(s)	1266
SmlI	CTYRAG	1 cut(s)	1333
SmoI	CTYRAG	1 cut(s)	1333
SphI	GCATGC	1 cut(s)	1612
Sse9I	AATT	7 cut(s)	451, 570, 773, 1424, 1438, 1846, 1907
SseBI	AGGCCT	1 cut(s)	802
SsiI	CCGC	4 cut(s)	19, 279, 2048, 2111
SspI	AATATT	3 cut(s)	685, 1318, 1831
SspMI	CTAG	3 cut(s)	504, 1326, 1760
StuI	AGGCCT	1 cut(s)	802
StyD4I	CCNGG	4 cut(s)	853, 1177, 1290, 1306
StyI	CCWWGG	3 cut(s)	503, 881, 1146
TaaI	ACNGT	9 cut(s)	100, 418, 554, 691, 755, 1451, 1651, 1782, 2072
TaiI	ACGT	1 cut(s)	814
TaqI	TCGA	6 cut(s)	173, 198, 411, 671, 1003, 1124
TasI	AATT	7 cut(s)	451, 570, 773, 1424, 1438, 1846, 1907
TauI	GCSGC	3 cut(s)	281, 2051, 2114
TfiI	GAWTC	4 cut(s)	88, 313, 1997, 2096
Tru1I	TTAA	6 cut(s)	72, 249, 269, 549, 1472, 2075
Tru9I	TTAA	6 cut(s)	72, 249, 269, 549, 1472, 2075
TscAI	CASTG	4 cut(s)	373, 383, 1449, 2059
TseFI	GTSAC	2 cut(s)	1254, 1983
Tsp45I	GTSAC	2 cut(s)	1254, 1983
TspDTI	ATGAA	8 cut(s)	24, 101, 777, 786, 1179, 1437, 1920, 1923
TspGWI	ACGGA	1 cut(s)	767
TspRI	CASTG	4 cut(s)	373, 383, 1449, 2059
Tth111I	GACNNNGTC	1 cut(s)	667
Van91I	CCANNNNNTGG	2 cut(s)	626, 1697
XagI	CCTNNNNNAGG	1 cut(s)	1699
XapI	RAATTY	3 cut(s)	570, 773, 1846
XceI	RCATGY	2 cut(s)	1255, 1612
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1971
XmaJI	CCTAGG	1 cut(s)	503
XspI	CTAG	3 cut(s)	504, 1326, 1760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.