Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000064.1

Orthogroup ID

OG0003620

Physical Location & Seq

Genomic Coordinates Reverse (-)

121894 .. 125182

Gene Structure 3289 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000064.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

atggaagaagagcagcagcagcagaagcaaagctcgctctctcttttatttagctgcaacaacactactggtaagattggcttcgatcacttagacgctgccttcagagctaaggtttactctgatcttggaaatcatgagtgtctggctggctggaatctgtttggtctcccagcaaatgaaagaatgtgctatggatcagagcgggtaaaaccctgttcatcttcagcagcatctcccatcgttgacgaacactttaacacaaccatgaatcacttgacagttgaaactgaagatacttttgccagcttacttgaacttgcagcaaacaatgacattgagagcttcagacgatcgatacagcacaatccttctgccatcgatgagattggcttatggtactgtcgtcagaagggctcaaagcagatggttaatgagctcagaacccctttaatggttgccgctacatatggtagtaatgatgtcataaagctgattctttctctctctgatgctgatgtaaatcagacctgtggtaatgatagaagcactgctctacactgcgctgcttcaggtggtgctgagaatgctgtcgatactgtgaggctgcttttagctgctggtgctgatcctaatttgattgatgcaaatggtcatcgtcctgttgatgttatagttgttcctcctaggctccagaatgtcagattagctcttgaagaactccttatgattaacggttctgttggtgaacaaattctctcagtctcaacaagagccctttctcctcctctatcaacttctccagacaatgggtctccatcagctttagatttcacttgttctccgacaaagtcgaagttctataatattactgtttcttctgcatcagagaagaaggaataccctgttgacccctctctgccagacatcaagaacagtatttattcaactgatgaatttcgtatgtattcattcaaggtgaggccttgttcacgtgcctactcccatgattggactgagtgcccttttgtccatcctggagaaaatgcacgaagaagggatccaaggaagtttcattacagctgtgttccttgccccgacttccgaaaaggggcttgcaggcgtggagatatgtgtgaatatgctcatggggtttttgagtgttggctacacccagctcaatatcgaacccgactctgcaaggatggtacaagttgtgcgaggagagtctgcttttttgcccacacagcagaggaactcaggccattgtatgtctctactggttctgctgttccttctcctcgctcgaccacttccggtgcttcagccatggattttgctgctgcaatgagcctcttgcctggttctccttcatcactctctgccatgtctccttcaccatttactccacccatgtctccctctggcaatggcatgtcacactcttctgtagcttggccccaacctaatgtcccagctctgcatctcccaggcagcaatattcagtctagtcgcttgagatcttccctttgtgcaagagatatggcagcagatgactttgatttactgccagagtttgatatgcagcaacagcagctcctaaatgaattatctatgagtaattcactgaaccgttctggtcggttgaataccttaacaccctcaaatctggatgatctcttttctgctgagaacttatctcctcgctactctgatcaagcattggcatcagctgtgttctccccaactcacaagtcagctcttctcaatcagtttcagcagcaacagagcatgctttcaccaatccatacaaacttttcgcccaaaaatactgttgatcaccctctattgcaggctccctttggagcaccatcctctgggaggatgtctccccgaaatgtggaacctatctcaccaatgggctctcgggtttccatgctaggtcaacgggagaagcaacagtttcgtagccttagttcacgggagcttggctccagctccacttccaatattggttcccctgcaaatgcttggtcaaaatggggatcgtctgatggaaaaccagattgggcagttacttcagatgaattgggaaagctacgcagatcatcttcatttgagctggggaacaatggagaggaaccagatctttcgtgggttcagtcacttgttaaagaatctcctactgaaatcaaagaaaagctaacaacacccgtctcaggtgttgcggccactggatcctccaatgacggtttaagtgcaaactcccaaatggaatcggttgatcatgcagcaatgggagcttggattgaccaactacatcttgatcttgtggctcagcaaaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 zf-CCCH

Protein Analysis

782

Amino Acids

85.2

Weight (kDa)

5.77

Isoelectric Point (pI)

59.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003620)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41900
fragaria_vesca	FvH4_7g01060
malus_domestica	MD03G1175400.v1.1 MD12G1068100.v1.1 MD14G1068200.v1.1
prunus_persica	Prupe.4G248900_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1 Prupe.7G065800_v2.0.a1
pyrus_communis	pycom03g13290 pycom11g16880 pycom12g06010
rosa_chinensis	RchiOBHm_Chr1g0316051 RchiOBHm_Chr3g0481371
rosa_laevigata	RLG00000023402 RLG00000030707
rosa_multiflora	Rmu_sc0000064.1_g000020 Rmu_sc0002014.1_g000008 Rmu_sc0002531.1_g000041
rosa_roxburghii	Rroxscaffold_6G00400470
rosa_rugosa	Rorug01G0008400 Rorug01G0008400 Rorug01G0008500 Rorug03G0191500 Rorug03G0191600
rosa_samantha	Rh1AG018800 Rh1BG012300 Rh1CG016100 Rh1DG012500 Rh3AG242500 Rh3BG277500 Rh3CG272500 Rh3DG269400
rosa_wichuraiana	Rw1G001200 Rw3G021670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	809, 1877
AccBSI	CCGCTC	1 cut(s)	205
AciI	CCGC	3 cut(s)	205, 462, 2228
AclWI	GGATC	7 cut(s)	205, 623, 1055, 1068, 2053, 2232, 2245
AcoI	YGGCCR	1 cut(s)	2229
AcsI	RAATTY	2 cut(s)	753, 956
AcuI	CTGAAG	7 cut(s)	88, 210, 312, 331, 555, 1308, 2064
AcvI	CACGTG	1 cut(s)	995
AfaI	GTAC	2 cut(s)	401, 1210
AfiI	CCNNNNNNNGG	8 cut(s)	454, 809, 1011, 1111, 1877, 1881, 1900, 2219
AgsI	TTSAA	6 cut(s)	287, 317, 716, 948, 976, 1648
AhdI	GACNNNNNGTC	1 cut(s)	811
AjnI	CCWGG	3 cut(s)	1036, 1360, 1489
AjuI	GAANNNNNNNTTGG	2 cut(s)	2050, 2082
Alw21I	GWGCWC	2 cut(s)	441, 1870
Alw26I	GTCTC	8 cut(s)	173, 769, 819, 1279, 1395, 1422, 1893, 2221
AlwI	GGATC	7 cut(s)	205, 623, 1055, 1068, 2053, 2232, 2245
Ama87I	CYCGRG	1 cut(s)	1926
AoxI	GGCC	4 cut(s)	983, 1262, 1457, 2229
ApoI	RAATTY	2 cut(s)	753, 956
ArsI	GACNNNNNNTTYG	2 cut(s)	2018, 2050
Asp700I	GAANNNNTTC	1 cut(s)	753
AspA2I	CCTAGG	1 cut(s)	686
AspLEI	GCGC	1 cut(s)	566
AspS9I	GGNCC	1 cut(s)	1458
AsuHPI	GGTGA	6 cut(s)	758, 991, 1389, 1791, 1832, 1905
AvaI	CYCGRG	1 cut(s)	1926
AvrII	CCTAGG	1 cut(s)	686
BaeGI	GKGCMC	1 cut(s)	1025
BaeI	ACNNNNGTAYC	2 cut(s)	391, 424
BamHI	GGATCC	2 cut(s)	1060, 2237
BanII	GRGCYC	4 cut(s)	419, 441, 778, 1925
BarI	GAAGNNNNNNTAC	4 cut(s)	884, 916, 1061, 1093
BbrPI	CACGTG	1 cut(s)	995
Bbv12I	GWGCWC	2 cut(s)	441, 1870
BccI	CCATC	8 cut(s)	248, 386, 421, 826, 1041, 1199, 1879, 2048
BcgI	CGANNNNNNTGC	2 cut(s)	1946, 1980
BciT130I	CCWGG	3 cut(s)	1038, 1362, 1491
BclI	TGATCA	3 cut(s)	1714, 1837, 2284
BcoDI	GTCTC	8 cut(s)	173, 769, 819, 1279, 1395, 1422, 1893, 2221
BfaI	CTAG	3 cut(s)	687, 1509, 1940
BfmI	CTRYAG	1 cut(s)	1449
BglII	AGATCT	2 cut(s)	1520, 2146
BlnI	CCTAGG	1 cut(s)	686
BlpI	GCTNAGC	1 cut(s)	2337
Bme1390I	CCNGG	3 cut(s)	1038, 1362, 1491
BmeRI	GACNNNNNGTC	1 cut(s)	811
BmeT110I	CYCGRG	1 cut(s)	1926
BmgT120I	GGNCC	1 cut(s)	1458
BmiI	GGNNCC	9 cut(s)	692, 1062, 1460, 1857, 1905, 1993, 2017, 2142, 2239
BmrFI	CCNGG	3 cut(s)	1038, 1362, 1491
BmsI	GCATC	6 cut(s)	242, 502, 634, 893, 1492, 1736
BplI	GAGNNNNNCTC	4 cut(s)	1873, 1905, 1976, 2008
BpmI	CTGGAG	4 cut(s)	677, 786, 1059, 1978
Bpu10I	CCTNAGC	1 cut(s)	111
Bpu1102I	GCTNAGC	1 cut(s)	2337
BpuEI	CTTGAG	1 cut(s)	1537
Bsa29I	ATCGAT	2 cut(s)	356, 381
BsaAI	YACGTR	1 cut(s)	995
BsaBI	GATNNNNATC	1 cut(s)	522
BsaI	GGTCTC	2 cut(s)	173, 819
BsaJI	CCNNGG	4 cut(s)	686, 1064, 1329, 1489
BsaWI	WCCGGW	1 cut(s)	1316
BsaXI	ACNNNNNCTCC	4 cut(s)	826, 856, 1581, 1611
Bsc4I	CCNNNNNNNGG	8 cut(s)	454, 809, 1011, 1111, 1877, 1881, 1900, 2219
Bse1I	ACTGG	3 cut(s)	73, 1285, 2239
Bse3DI	GCAATG	3 cut(s)	1353, 1435, 2301
Bse8I	GATNNNNATC	1 cut(s)	522
BseBI	CCWGG	3 cut(s)	1038, 1362, 1491
BseCI	ATCGAT	2 cut(s)	356, 381
BseDI	CCNNGG	4 cut(s)	686, 1064, 1329, 1489
BseGI	GGATG	5 cut(s)	1033, 1210, 1678, 1871, 1890
BseJI	GATNNNNATC	1 cut(s)	522
BseLI	CCNNNNNNNGG	8 cut(s)	454, 809, 1011, 1111, 1877, 1881, 1900, 2219
BseMI	GCAATG	3 cut(s)	1353, 1435, 2301
BseMII	CTCAG	7 cut(s)	454, 573, 774, 1008, 1273, 1680, 2232
BseNI	ACTGG	3 cut(s)	73, 1285, 2239
BseRI	GAGGAG	5 cut(s)	774, 777, 1237, 1290, 1692
BseSI	GKGCMC	1 cut(s)	1025
BseYI	CCCAGC	4 cut(s)	172, 1174, 1474, 2122
Bsh1285I	CGRYCG	1 cut(s)	356
BshFI	GGCC	4 cut(s)	985, 1264, 1459, 2231
BshVI	ATCGAT	2 cut(s)	356, 381
BsiEI	CGRYCG	1 cut(s)	356
BsiHKAI	GWGCWC	2 cut(s)	441, 1870
BsiHKCI	CYCGRG	1 cut(s)	1926
BsiSI	CCGG	1 cut(s)	1317
BslFI	GGGAC	1 cut(s)	1457
BslI	CCNNNNNNNGG	8 cut(s)	454, 809, 1011, 1111, 1877, 1881, 1900, 2219
BsmAI	GTCTC	8 cut(s)	173, 769, 819, 1279, 1395, 1422, 1893, 2221
BsmBI	CGTCTC	1 cut(s)	2221
BsmFI	GGGAC	1 cut(s)	1457
BsmI	GAATGC	1 cut(s)	592
BsnI	GGCC	4 cut(s)	985, 1264, 1459, 2231
Bso31I	GGTCTC	2 cut(s)	173, 819
BsoBI	CYCGRG	1 cut(s)	1926
Bsp1286I	GDGCHC	6 cut(s)	419, 441, 778, 1025, 1870, 1925
Bsp1720I	GCTNAGC	1 cut(s)	2337
Bsp19I	CCATGG	1 cut(s)	1329
BspACI	CCGC	3 cut(s)	205, 462, 2228
BspANI	GGCC	4 cut(s)	985, 1264, 1459, 2231
BspCNI	CTCAG	7 cut(s)	453, 574, 773, 1009, 1272, 1681, 2231
BspDI	ATCGAT	2 cut(s)	356, 381
BspHI	TCATGA	1 cut(s)	136
BspLI	GGNNCC	9 cut(s)	692, 1062, 1460, 1857, 1905, 1993, 2017, 2142, 2239
BspPI	GGATC	7 cut(s)	205, 623, 1055, 1068, 2053, 2232, 2245
BspQI	GCTCTTC	2 cut(s)	3, 1767
BspTNI	GGTCTC	2 cut(s)	173, 819
BsrBI	CCGCTC	1 cut(s)	205
BsrDI	GCAATG	3 cut(s)	1353, 1435, 2301
BsrI	ACTGG	3 cut(s)	73, 1285, 2239
BssECI	CCNNGG	4 cut(s)	686, 1064, 1329, 1489
BssT1I	CCWWGG	3 cut(s)	686, 1064, 1329
Bst2UI	CCWGG	3 cut(s)	1038, 1362, 1491
Bst6I	CTCTTC	3 cut(s)	3, 1450, 1767
BstBAI	YACGTR	1 cut(s)	995
BstC8I	GCNNGC	7 cut(s)	35, 151, 307, 1117, 1121, 1793, 1854
BstDSI	CCRYGG	1 cut(s)	1329
BstENI	CCTNNNNNAGG	1 cut(s)	1879
BstF5I	GGATG	5 cut(s)	1033, 1210, 1678, 1871, 1890
BstHHI	GCGC	1 cut(s)	566
BstMAI	GTCTC	8 cut(s)	173, 769, 819, 1279, 1395, 1422, 1893, 2221
BstMCI	CGRYCG	1 cut(s)	356
BstNI	CCWGG	3 cut(s)	1038, 1362, 1491
BstNSI	RCATGY	2 cut(s)	1438, 1795
BstSCI	CCNGG	3 cut(s)	1036, 1360, 1489
BstSFI	CTRYAG	1 cut(s)	1449
BstSLI	GKGCMC	1 cut(s)	1025
BstX2I	RGATCY	4 cut(s)	1060, 1520, 2146, 2237
BstYI	RGATCY	4 cut(s)	1060, 1520, 2146, 2237
Bsu15I	ATCGAT	2 cut(s)	356, 381
BsuRI	GGCC	4 cut(s)	985, 1264, 1459, 2231
BsuTUI	ATCGAT	2 cut(s)	356, 381
BtgI	CCRYGG	1 cut(s)	1329
BtsCI	GGATG	5 cut(s)	1033, 1210, 1678, 1871, 1890
BtsI	GCAGTG	2 cut(s)	549, 559
BtsIMutI	CAGTG	4 cut(s)	549, 559, 1625, 2232
Cac8I	GCNNGC	7 cut(s)	35, 151, 307, 1117, 1121, 1793, 1854
CciI	TCATGA	1 cut(s)	136
CfoI	GCGC	1 cut(s)	566
Cfr13I	GGNCC	1 cut(s)	1458
ClaI	ATCGAT	2 cut(s)	356, 381
CseI	GACGC	1 cut(s)	104
Csp6I	GTAC	2 cut(s)	400, 1209
CviQI	GTAC	2 cut(s)	400, 1209
DriI	GACNNNNNGTC	1 cut(s)	811
EaeI	YGGCCR	1 cut(s)	2229
Eam1104I	CTCTTC	3 cut(s)	3, 1450, 1767
Eam1105I	GACNNNNNGTC	1 cut(s)	811
EarI	CTCTTC	3 cut(s)	3, 1450, 1767
Ecl136II	GAGCTC	1 cut(s)	439
Eco130I	CCWWGG	3 cut(s)	686, 1064, 1329
Eco147I	AGGCCT	1 cut(s)	985
Eco24I	GRGCYC	4 cut(s)	419, 441, 778, 1925
Eco31I	GGTCTC	2 cut(s)	173, 819
Eco53kI	GAGCTC	1 cut(s)	439
Eco57I	CTGAAG	7 cut(s)	88, 210, 312, 331, 555, 1308, 2064
Eco72I	CACGTG	1 cut(s)	995
Eco88I	CYCGRG	1 cut(s)	1926
EcoICRI	GAGCTC	1 cut(s)	439
EcoNI	CCTNNNNNAGG	1 cut(s)	1879
EcoRII	CCWGG	3 cut(s)	1036, 1360, 1489
EcoT14I	CCWWGG	3 cut(s)	686, 1064, 1329
EcoT38I	GRGCYC	4 cut(s)	419, 441, 778, 1925
ErhI	CCWWGG	3 cut(s)	686, 1064, 1329
Esp3I	CGTCTC	1 cut(s)	2221
FalI	AAGNNNNNCTT	4 cut(s)	65, 97, 708, 740
FaqI	GGGAC	1 cut(s)	1457
FauI	CCCGC	1 cut(s)	198
FauNDI	CATATG	1 cut(s)	469
FbaI	TGATCA	3 cut(s)	1714, 1837, 2284
FokI	GGATG	5 cut(s)	1020, 1217, 1685, 1858, 1897
FriOI	GRGCYC	4 cut(s)	419, 441, 778, 1925
FspBI	CTAG	3 cut(s)	687, 1509, 1940
GlaI	GCGC	1 cut(s)	565
GsaI	CCCAGC	4 cut(s)	176, 1178, 1478, 2126
GsuI	CTGGAG	4 cut(s)	677, 786, 1059, 1978
HaeIII	GGCC	4 cut(s)	985, 1264, 1459, 2231
HapII	CCGG	1 cut(s)	1317
HgaI	GACGC	1 cut(s)	104
HhaI	GCGC	1 cut(s)	566
Hin6I	GCGC	1 cut(s)	564
HinP1I	GCGC	1 cut(s)	564
HincII	GTYRAC	3 cut(s)	247, 910, 1946
HindII	GTYRAC	3 cut(s)	247, 910, 1946
HinfI	GANTC	7 cut(s)	157, 271, 496, 1194, 1227, 2177, 2276
HpaII	CCGG	1 cut(s)	1317
HphI	GGTGA	6 cut(s)	758, 991, 1389, 1791, 1832, 1905
Hpy166II	GTNNAC	7 cut(s)	118, 247, 749, 910, 992, 1946, 1979
Hpy188III	TCNNGA	7 cut(s)	137, 694, 713, 803, 931, 1670, 2324
Hpy8I	GTNNAC	7 cut(s)	118, 247, 749, 910, 992, 1946, 1979
HpyAV	CCTTC	8 cut(s)	112, 381, 406, 889, 1050, 1305, 1380, 1404
HpyCH4IV	ACGT	1 cut(s)	994
HpySE526I	ACGT	1 cut(s)	994
HspAI	GCGC	1 cut(s)	564
Ksp22I	TGATCA	3 cut(s)	1714, 1837, 2284
LguI	GCTCTTC	2 cut(s)	3, 1767
LmnI	GCTCC	8 cut(s)	696, 1602, 1861, 1865, 1984, 1997, 2003, 2300
LweI	GCATC	6 cut(s)	242, 502, 634, 893, 1492, 1736
MaeI	CTAG	3 cut(s)	687, 1509, 1940
MaeII	ACGT	1 cut(s)	994
MaeIII	GTNAC	3 cut(s)	1437, 2074, 2163
MbiI	CCGCTC	1 cut(s)	205
MflI	RGATCY	4 cut(s)	1060, 1520, 2146, 2237
MhlI	GDGCHC	6 cut(s)	419, 441, 778, 1025, 1870, 1925
MluCI	AATT	6 cut(s)	634, 753, 956, 1607, 1621, 2087
MlyI	GAGTC	2 cut(s)	1188, 1236
MmeI	TCCRAC	1 cut(s)	869
MroXI	GAANNNNTTC	1 cut(s)	753
MseI	TTAA	7 cut(s)	258, 432, 452, 732, 1655, 2172, 2255
MslI	CAYNNNNRTG	1 cut(s)	266
MspA1I	CMGCKG	2 cut(s)	1083, 1733
MspI	CCGG	1 cut(s)	1317
MspR9I	CCNGG	3 cut(s)	1038, 1362, 1491
Mva1269I	GAATGC	1 cut(s)	592
MvaI	CCWGG	3 cut(s)	1038, 1362, 1491
NcoI	CCATGG	1 cut(s)	1329
NdeI	CATATG	1 cut(s)	469
NlaIV	GGNNCC	9 cut(s)	692, 1062, 1460, 1857, 1905, 1993, 2017, 2142, 2239
NmuCI	GTSAC	2 cut(s)	1437, 2163
NspI	RCATGY	2 cut(s)	1438, 1795
PaeI	GCATGC	1 cut(s)	1795
PagI	TCATGA	1 cut(s)	136
PceI	AGGCCT	1 cut(s)	985
PciSI	GCTCTTC	2 cut(s)	3, 1767
PctI	GAATGC	1 cut(s)	592
PdmI	GAANNNNTTC	1 cut(s)	753
PfeI	GAWTC	5 cut(s)	157, 271, 496, 2177, 2276
PflFI	GACNNNGTC	1 cut(s)	850
PflMI	CCANNNNNTGG	2 cut(s)	809, 1877
PfoI	TCCNGGA	1 cut(s)	1036
Ple19I	CGATCG	1 cut(s)	356
PleI	GAGTC	2 cut(s)	1188, 1235
PmaCI	CACGTG	1 cut(s)	995
PmlI	CACGTG	1 cut(s)	995
PpsI	GAGTC	2 cut(s)	1188, 1235
Ppu21I	YACGTR	1 cut(s)	995
Psp124BI	GAGCTC	1 cut(s)	441
Psp6I	CCWGG	3 cut(s)	1036, 1360, 1489
PspCI	CACGTG	1 cut(s)	995
PspFI	CCCAGC	4 cut(s)	172, 1174, 1474, 2122
PspGI	CCWGG	3 cut(s)	1036, 1360, 1489
PspN4I	GGNNCC	9 cut(s)	692, 1062, 1460, 1857, 1905, 1993, 2017, 2142, 2239
PspPI	GGNCC	1 cut(s)	1458
PsrI	GAACNNNNNNTAC	2 cut(s)	1960, 1992
PsuI	RGATCY	4 cut(s)	1060, 1520, 2146, 2237
PsyI	GACNNNGTC	1 cut(s)	850
PvuI	CGATCG	1 cut(s)	356
PvuII	CAGCTG	2 cut(s)	1083, 1733
RsaI	GTAC	2 cut(s)	401, 1210
RsaNI	GTAC	2 cut(s)	400, 1209
RseI	CAYNNNNRTG	1 cut(s)	266
SacI	GAGCTC	1 cut(s)	441
SapI	GCTCTTC	2 cut(s)	3, 1767
SaqAI	TTAA	7 cut(s)	258, 432, 452, 732, 1655, 2172, 2255
Sau96I	GGNCC	1 cut(s)	1458
SchI	GAGTC	2 cut(s)	1188, 1236
ScrFI	CCNGG	3 cut(s)	1038, 1362, 1491
SduI	GDGCHC	6 cut(s)	419, 441, 778, 1025, 1870, 1925
SfaNI	GCATC	6 cut(s)	242, 502, 634, 893, 1492, 1736
SfcI	CTRYAG	1 cut(s)	1449
SmiMI	CAYNNNNRTG	1 cut(s)	266
SmlI	CTYRAG	1 cut(s)	1516
SmoI	CTYRAG	1 cut(s)	1516
SphI	GCATGC	1 cut(s)	1795
Sse9I	AATT	6 cut(s)	634, 753, 956, 1607, 1621, 2087
SseBI	AGGCCT	1 cut(s)	985
SsiI	CCGC	3 cut(s)	205, 462, 2228
SspI	AATATT	3 cut(s)	868, 1501, 2011
SspMI	CTAG	3 cut(s)	687, 1509, 1940
SstI	GAGCTC	1 cut(s)	441
StuI	AGGCCT	1 cut(s)	985
StyD4I	CCNGG	3 cut(s)	1036, 1360, 1489
StyI	CCWWGG	3 cut(s)	686, 1064, 1329
TaiI	ACGT	1 cut(s)	997
TaqI	TCGA	7 cut(s)	84, 356, 381, 594, 854, 1186, 1307
TasI	AATT	6 cut(s)	634, 753, 956, 1607, 1621, 2087
TauI	GCSGC	2 cut(s)	464, 2231
TfiI	GAWTC	5 cut(s)	157, 271, 496, 2177, 2276
Tru1I	TTAA	7 cut(s)	258, 432, 452, 732, 1655, 2172, 2255
Tru9I	TTAA	7 cut(s)	258, 432, 452, 732, 1655, 2172, 2255
TscAI	CASTG	4 cut(s)	556, 566, 1632, 2239
TseFI	GTSAC	2 cut(s)	1437, 2163
Tsp45I	GTSAC	2 cut(s)	1437, 2163
TspRI	CASTG	4 cut(s)	556, 566, 1632, 2239
Tth111I	GACNNNGTC	1 cut(s)	850
Van91I	CCANNNNNTGG	2 cut(s)	809, 1877
XagI	CCTNNNNNAGG	1 cut(s)	1879
XapI	RAATTY	2 cut(s)	753, 956
XceI	RCATGY	2 cut(s)	1438, 1795
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2151
XmaJI	CCTAGG	1 cut(s)	686
XmnI	GAANNNNTTC	1 cut(s)	753
XspI	CTAG	3 cut(s)	687, 1509, 1940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.