AT2G43230
ERF Family

Belongs to the protein kinase superfamily. Tyr protein kinase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
17966251 .. 17968726
2476 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G43230.1

Sequence Viewer

Length: 1221 bp
ATGGATCGTGATTTTCATCGTCGTGGTCAAGTGGCGAATGATCGTACACAAAGCAACTTTGTTCGATTGGATAAACCGAGAGCTGTAGACGATCTTGATATAGGCAAGAGAGGGAAGATGCGTAGGTGGTTGTGCTGTTCTTGTCGTGTACAAGAATCTTACCCATCAGCTGAAAATAACCGATTGAAAACCCCTCCTACTCGCCATTACGACTATGGACGTAACAACAAGAAAACACCAGCTCCTGTGAAGCCTCCTGTTTTGAAGGAGCCTCCGCCTATTGATGTCCCCGCAATGTCATTGGTTGAGCTCAAAGAAAAGACTCAGAATTTTGGATCAAAGGCATTGATTGGAGAAGGATCCTATGGAAGAGTGTACTACGCAAACTTTAATGATGGGAAGGCCGTGGCTGTGAAAAAGCTTGATAATGCATCTGAACCCGAAACAAATGTCGAGTTCTTGACTCAGGTCTCTAAAGTTTCGAGGCTGAAAAGTGACAATTTTGTTCAGCTTCTTGGTTATTGTGTAGAAGGGAACCTTCGTGTCCTTGCTTATGAGTTTGCCACAATGAGATCATTGCACGACATCTTACACGGGAGAAAGGGAGTGCAAGGAGCACAACCTGGTCCAACACTTGAGTGGATGCAACGAGTCCGAGTTGCGGTTGATGCAGCTAAAGGATTAGAATACTTACACGAGAAAGTTCAACCTGCGGTTATACACAGAGATATTCGATCTAGCAATGTGCTTATTTTCGAAGATTTCAAAGCCAAGATTGCTGACTTTAATCTTTCCAATCAAGCTCCTGATATGGCTGCTCGTCTTCATTCCACTAGAGTTTTGGGGACCTTCGGTTATCATGCACCAGAATATGCGATGACAGGACAGTTGACACAGAAGAGTGATGTTTACAGTTTTGGAGTTGTGCTTTTGGAACTTCTTACCGGGAGAAAACCGGTTGATCATACTATGCCTCGTGGTCAACAGAGTCTTGTCACTTGGGCTACTCCAAGGCTGAGTGAAGACAAAGTGAAACAATGTGTTGATCCAAAACTCAAAGGAGAGTATCCTCCTAAAGCAGTGGCAAAGCTTGCAGCGGTTGCAGCGTTGTGTGTGCAATACGAAGCAGAGTTTAGGCCAAACATGAGCATTGTAGTAAAAGCTCTTCAACCGCTCTTGAGGTCAGCAACAGCTGCTGCTCCTCCAACACCTCAACCTTGA

Protein Analysis

406

Amino Acids

45.37

Weight (kDa)

9.49

Isoelectric Point (pI)

33.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 114 - 327 7.9e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 116 - 389 1.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 718
AccBSI CCGCTC 1 cut(s) 1174
AccI GTMKAC 1 cut(s) 87
AciI CCGC 6 cut(s) 275, 291, 662, 713, 1097, 1172
AclWI GGATC 5 cut(s) 12, 343, 354, 367, 1040
AcsI RAATTY 1 cut(s) 328
AfaI GTAC 3 cut(s) 46, 150, 377
AfiI CCNNNNNNNGG 1 cut(s) 661
AgeI ACCGGT 1 cut(s) 955
AgsI TTSAA 5 cut(s) 187, 265, 707, 766, 1169
AjnI CCWGG 1 cut(s) 622
AleI CACNNNNGTG 1 cut(s) 637
Alw21I GWGCWC 2 cut(s) 312, 619
Alw26I GTCTC 1 cut(s) 475
AlwI GGATC 5 cut(s) 12, 343, 354, 367, 1040
AlwNI CAGNNNCTG 2 cut(s) 245, 1196
AoxI GGCC 2 cut(s) 402, 1136
ApeKI GCWGC 6 cut(s) 671, 815, 1094, 1103, 1193, 1196
ApoI RAATTY 1 cut(s) 328
ArsI GACNNNNNNTTYG 2 cut(s) 435, 467
AsiGI ACCGGT 1 cut(s) 955
AspS9I GGNCC 2 cut(s) 626, 846
AsuC2I CCSGG 1 cut(s) 946
AsuII TTCGAA 1 cut(s) 756
AvaII GGWCC 2 cut(s) 626, 846
BamHI GGATCC 1 cut(s) 359
BanII GRGCYC 1 cut(s) 312
BarI GAAGNNNNNNTAC 2 cut(s) 1149, 1181
BauI CACGAG 2 cut(s) 695, 975
BbsI GAAGAC 2 cut(s) 815, 1029
Bbv12I GWGCWC 2 cut(s) 312, 619
BbvI GCAGC 6 cut(s) 683, 802, 1106, 1115, 1180, 1183
BccI CCATC 2 cut(s) 172, 389
BceAI ACGGC 1 cut(s) 389
BciT130I CCWGG 1 cut(s) 624
BciVI GTATCC 1 cut(s) 1077
BclI TGATCA 1 cut(s) 961
BcnI CCSGG 1 cut(s) 946
BcoDI GTCTC 1 cut(s) 475
BfaI CTAG 2 cut(s) 738, 834
BfmI CTRYAG 1 cut(s) 84
BfuAI ACCTGC 1 cut(s) 718
BfuI GTATCC 1 cut(s) 1077
BisI GCNGC 6 cut(s) 672, 816, 1095, 1104, 1194, 1197
BlsI GCNGC 6 cut(s) 673, 817, 1096, 1105, 1195, 1198
Bme1390I CCNGG 2 cut(s) 624, 946
Bme18I GGWCC 2 cut(s) 626, 846
BmgT120I GGNCC 2 cut(s) 626, 846
BmiI GGNNCC 4 cut(s) 270, 361, 536, 847
BmrFI CCNGG 2 cut(s) 624, 946
BmsI GCATC 4 cut(s) 108, 440, 633, 658
BoxI GACNNNNGTC 1 cut(s) 467
BpiI GAAGAC 2 cut(s) 815, 1029
Bpu14I TTCGAA 1 cut(s) 756
BpuEI CTTGAG 2 cut(s) 656, 1198
BpuMI CCSGG 1 cut(s) 946
BsaBI GATNNNNATC 1 cut(s) 15
BsaI GGTCTC 1 cut(s) 475
BsaJI CCNNGG 2 cut(s) 405, 1010
BsaWI WCCGGW 1 cut(s) 955
BsaXI ACNNNNNCTCC 2 cut(s) 226, 256
Bsc4I CCNNNNNNNGG 1 cut(s) 661
Bse118I RCCGGY 1 cut(s) 955
Bse3DI GCAATG 3 cut(s) 300, 575, 748
Bse8I GATNNNNATC 1 cut(s) 15
BseBI CCWGG 1 cut(s) 624
BseDI CCNNGG 2 cut(s) 405, 1010
BseGI GGATG 1 cut(s) 648
BseJI GATNNNNATC 1 cut(s) 15
BseLI CCNNNNNNNGG 1 cut(s) 661
BseMI GCAATG 3 cut(s) 300, 575, 748
BseMII CTCAG 3 cut(s) 338, 479, 1007
BseRI GAGGAG 1 cut(s) 1191
BseXI GCAGC 6 cut(s) 683, 802, 1106, 1115, 1180, 1183
BshFI GGCC 2 cut(s) 404, 1138
BshTI ACCGGT 1 cut(s) 955
BsiHKAI GWGCWC 2 cut(s) 312, 619
BsiSI CCGG 2 cut(s) 945, 956
BslFI GGGAC 2 cut(s) 272, 859
BslI CCNNNNNNNGG 1 cut(s) 661
BsmAI GTCTC 1 cut(s) 475
BsmFI GGGAC 2 cut(s) 272, 859
BsnI GGCC 2 cut(s) 404, 1138
Bso31I GGTCTC 1 cut(s) 475
Bsp119I TTCGAA 1 cut(s) 756
Bsp1286I GDGCHC 2 cut(s) 312, 619
Bsp1407I TGTACA 1 cut(s) 148
Bsp143I GATC 9 cut(s) 4, 40, 91, 335, 359, 572, 734, 961, 1045
BspACI CCGC 6 cut(s) 275, 291, 662, 713, 1097, 1172
BspANI GGCC 2 cut(s) 404, 1138
BspCNI CTCAG 3 cut(s) 337, 478, 1008
BspLI GGNNCC 4 cut(s) 270, 361, 536, 847
BspMI ACCTGC 1 cut(s) 718
BspPI GGATC 5 cut(s) 12, 343, 354, 367, 1040
BspQI GCTCTTC 1 cut(s) 1170
BspT104I TTCGAA 1 cut(s) 756
BspTNI GGTCTC 1 cut(s) 475
BsrBI CCGCTC 1 cut(s) 1174
BsrDI GCAATG 3 cut(s) 300, 575, 748
BsrFI RCCGGY 1 cut(s) 955
BsrGI TGTACA 1 cut(s) 148
BssAI RCCGGY 1 cut(s) 955
BssECI CCNNGG 2 cut(s) 405, 1010
BssMI GATC 9 cut(s) 4, 40, 91, 335, 359, 572, 734, 961, 1045
BssSI CACGAG 2 cut(s) 695, 975
BssT1I CCWWGG 1 cut(s) 1010
Bst2BI CACGAG 2 cut(s) 695, 975
Bst2UI CCWGG 1 cut(s) 624
Bst4CI ACNGT 2 cut(s) 888, 914
Bst6I CTCTTC 3 cut(s) 364, 893, 1170
BstAPI GCANNNNNTGC 3 cut(s) 1091, 1100, 1193
BstAUI TGTACA 1 cut(s) 148
BstBI TTCGAA 1 cut(s) 756
BstC8I GCNNGC 1 cut(s) 1092
BstDEI CTNAG 3 cut(s) 324, 465, 1016
BstDSI CCRYGG 1 cut(s) 405
BstF5I GGATG 1 cut(s) 648
BstKTI GATC 9 cut(s) 7, 43, 94, 338, 362, 575, 737, 964, 1048
BstMAI GTCTC 1 cut(s) 475
BstMBI GATC 9 cut(s) 4, 40, 91, 335, 359, 572, 734, 961, 1045
BstMWI GCNNNNNNNGC 6 cut(s) 668, 776, 1091, 1100, 1103, 1193
BstNI CCWGG 1 cut(s) 624
BstPAI GACNNNNGTC 1 cut(s) 467
BstSCI CCNGG 2 cut(s) 622, 944
BstSFI CTRYAG 1 cut(s) 84
BstV1I GCAGC 6 cut(s) 683, 802, 1106, 1115, 1180, 1183
BstV2I GAAGAC 2 cut(s) 815, 1029
BstX2I RGATCY 1 cut(s) 359
BstYI RGATCY 1 cut(s) 359
BsuI GTATCC 1 cut(s) 1077
BsuRI GGCC 2 cut(s) 404, 1138
BtgI CCRYGG 1 cut(s) 405
BtgZI GCGATG 1 cut(s) 890
BtsCI GGATG 1 cut(s) 648
BtsI GCAGTG 1 cut(s) 1086
BtsIMutI CAGTG 1 cut(s) 1086
BveI ACCTGC 1 cut(s) 718
Cac8I GCNNGC 1 cut(s) 1092
CaiI CAGNNNCTG 2 cut(s) 245, 1196
Cfr10I RCCGGY 1 cut(s) 955
Cfr13I GGNCC 2 cut(s) 626, 846
CsiI ACCWGGT 1 cut(s) 622
Csp6I GTAC 3 cut(s) 45, 149, 376
CspAI ACCGGT 1 cut(s) 955
CviAII CATG 2 cut(s) 860, 1144
CviQI GTAC 3 cut(s) 45, 149, 376
DdeI CTNAG 3 cut(s) 324, 465, 1016
DpnI GATC 9 cut(s) 6, 42, 93, 337, 361, 574, 736, 963, 1047
DpnII GATC 9 cut(s) 4, 40, 91, 335, 359, 572, 734, 961, 1045
Eam1104I CTCTTC 3 cut(s) 364, 893, 1170
EarI CTCTTC 3 cut(s) 364, 893, 1170
EciI GGCGGA 1 cut(s) 264
Ecl136II GAGCTC 1 cut(s) 310
Eco130I CCWWGG 1 cut(s) 1010
Eco24I GRGCYC 1 cut(s) 312
Eco31I GGTCTC 1 cut(s) 475
Eco47I GGWCC 2 cut(s) 626, 846
Eco53kI GAGCTC 1 cut(s) 310
EcoICRI GAGCTC 1 cut(s) 310
EcoO109I RGGNCCY 1 cut(s) 846
EcoRII CCWGG 1 cut(s) 622
EcoT14I CCWWGG 1 cut(s) 1010
EcoT22I ATGCAT 1 cut(s) 433
EcoT38I GRGCYC 1 cut(s) 312
ErhI CCWWGG 1 cut(s) 1010
FaeI CATG 2 cut(s) 863, 1147
FalI AAGNNNNNCTT 2 cut(s) 522, 554
FaqI GGGAC 2 cut(s) 272, 859
FatI CATG 2 cut(s) 859, 1143
FauI CCCGC 1 cut(s) 298
FbaI TGATCA 1 cut(s) 961
FblI GTMKAC 1 cut(s) 87
Fnu4HI GCNGC 6 cut(s) 672, 816, 1095, 1104, 1194, 1197
FokI GGATG 1 cut(s) 655
FriOI GRGCYC 1 cut(s) 312
Fsp4HI GCNGC 6 cut(s) 672, 816, 1095, 1104, 1194, 1197
FspBI CTAG 2 cut(s) 738, 834
GluI GCNGC 6 cut(s) 672, 816, 1095, 1104, 1194, 1197
HaeIII GGCC 2 cut(s) 404, 1138
HapII CCGG 2 cut(s) 945, 956
Hin1II CATG 2 cut(s) 863, 1147
HincII GTYRAC 2 cut(s) 891, 983
HindII GTYRAC 2 cut(s) 891, 983
HindIII AAGCTT 2 cut(s) 419, 1088
HinfI GANTC 5 cut(s) 155, 322, 463, 651, 988
HpaII CCGG 2 cut(s) 945, 956
Hpy166II GTNNAC 7 cut(s) 47, 88, 149, 376, 891, 910, 983
Hpy188I TCNGA 3 cut(s) 327, 436, 656
Hpy188III TCNNGA 5 cut(s) 8, 95, 460, 806, 1177
Hpy8I GTNNAC 7 cut(s) 47, 88, 149, 376, 891, 910, 983
Hpy99I CGWCG 1 cut(s) 24
HpyAV CCTTC 6 cut(s) 259, 350, 394, 524, 548, 859
HpyCH4III ACNGT 2 cut(s) 888, 914
HpyCH4IV ACGT 1 cut(s) 220
HpyCH4V TGCA 9 cut(s) 431, 580, 610, 646, 671, 863, 1094, 1103, 1117
HpyF10VI GCNNNNNNNGC 6 cut(s) 668, 776, 1091, 1100, 1103, 1193
HpyF3I CTNAG 3 cut(s) 324, 465, 1016
HpySE526I ACGT 1 cut(s) 220
Hsp92II CATG 2 cut(s) 863, 1147
Ksp22I TGATCA 1 cut(s) 961
Kzo9I GATC 9 cut(s) 4, 40, 91, 335, 359, 572, 734, 961, 1045
LguI GCTCTTC 1 cut(s) 1170
LmnI GCTCC 5 cut(s) 247, 268, 614, 808, 1204
Lsp1109I GCAGC 6 cut(s) 683, 802, 1106, 1115, 1180, 1183
LweI GCATC 4 cut(s) 108, 440, 633, 658
MabI ACCWGGT 1 cut(s) 622
MaeI CTAG 2 cut(s) 738, 834
MaeII ACGT 1 cut(s) 220
MaeIII GTNAC 3 cut(s) 221, 494, 994
MalI GATC 9 cut(s) 6, 42, 93, 337, 361, 574, 736, 963, 1047
MbiI CCGCTC 1 cut(s) 1174
MboI GATC 9 cut(s) 4, 40, 91, 335, 359, 572, 734, 961, 1045
MboII GAAGA 7 cut(s) 127, 381, 770, 815, 910, 1034, 1157
MflI RGATCY 1 cut(s) 359
MhlI GDGCHC 2 cut(s) 312, 619
MluCI AATT 2 cut(s) 328, 499
MlyI GAGTC 4 cut(s) 316, 457, 660, 997
MmeI TCCRAC 1 cut(s) 653
Mph1103I ATGCAT 1 cut(s) 433
MseI TTAA 2 cut(s) 390, 786
MslI CAYNNNNRTG 2 cut(s) 21, 637
MspA1I CMGCKG 3 cut(s) 170, 1097, 1193
MspI CCGG 2 cut(s) 945, 956
MspR9I CCNGG 2 cut(s) 624, 946
MvaI CCWGG 1 cut(s) 624
MwoI GCNNNNNNNGC 6 cut(s) 668, 776, 1091, 1100, 1103, 1193
NciI CCSGG 1 cut(s) 946
NdeII GATC 9 cut(s) 4, 40, 91, 335, 359, 572, 734, 961, 1045
NlaIII CATG 2 cut(s) 863, 1147
NlaIV GGNNCC 4 cut(s) 270, 361, 536, 847
NmuCI GTSAC 2 cut(s) 494, 994
NsiI ATGCAT 1 cut(s) 433
NspV TTCGAA 1 cut(s) 756
OliI CACNNNNGTG 1 cut(s) 637
PciSI GCTCTTC 1 cut(s) 1170
PfeI GAWTC 1 cut(s) 155
PinAI ACCGGT 1 cut(s) 955
PkrI GCNGC 6 cut(s) 673, 817, 1096, 1105, 1195, 1198
PleI GAGTC 4 cut(s) 316, 457, 659, 996
PpsI GAGTC 4 cut(s) 316, 457, 659, 996
PpuMI RGGWCCY 1 cut(s) 846
PshAI GACNNNNGTC 1 cut(s) 467
Psp124BI GAGCTC 1 cut(s) 312
Psp5II RGGWCCY 1 cut(s) 846
Psp6I CCWGG 1 cut(s) 622
PspGI CCWGG 1 cut(s) 622
PspN4I GGNNCC 4 cut(s) 270, 361, 536, 847
PspPI GGNCC 2 cut(s) 626, 846
PspPPI RGGWCCY 1 cut(s) 846
PstNI CAGNNNCTG 2 cut(s) 245, 1196
PsuI RGATCY 1 cut(s) 359
PvuII CAGCTG 2 cut(s) 170, 1193
RsaI GTAC 3 cut(s) 46, 150, 377
RsaNI GTAC 3 cut(s) 45, 149, 376
RseI CAYNNNNRTG 2 cut(s) 21, 637
SacI GAGCTC 1 cut(s) 312
SapI GCTCTTC 1 cut(s) 1170
SaqAI TTAA 2 cut(s) 390, 786
SatI GCNGC 6 cut(s) 672, 816, 1095, 1104, 1194, 1197
Sau3AI GATC 9 cut(s) 4, 40, 91, 335, 359, 572, 734, 961, 1045
Sau96I GGNCC 2 cut(s) 626, 846
SchI GAGTC 4 cut(s) 316, 457, 660, 997
ScrFI CCNGG 2 cut(s) 624, 946
SduI GDGCHC 2 cut(s) 312, 619
SexAI ACCWGGT 1 cut(s) 622
SfaNI GCATC 4 cut(s) 108, 440, 633, 658
SfcI CTRYAG 1 cut(s) 84
SfuI TTCGAA 1 cut(s) 756
SinI GGWCC 2 cut(s) 626, 846
SmiMI CAYNNNNRTG 2 cut(s) 21, 637
SmlI CTYRAG 2 cut(s) 635, 1177
SmoI CTYRAG 2 cut(s) 635, 1177
Sse9I AATT 2 cut(s) 328, 499
SsiI CCGC 6 cut(s) 275, 291, 662, 713, 1097, 1172
SspMI CTAG 2 cut(s) 738, 834
SstI GAGCTC 1 cut(s) 312
StyD4I CCNGG 2 cut(s) 622, 944
StyI CCWWGG 1 cut(s) 1010
TaaI ACNGT 2 cut(s) 888, 914
TaiI ACGT 1 cut(s) 223
TaqI TCGA 5 cut(s) 64, 453, 482, 733, 756
TasI AATT 2 cut(s) 328, 499
TatI WGTACW 2 cut(s) 148, 375
TfiI GAWTC 1 cut(s) 155
Tru1I TTAA 2 cut(s) 390, 786
Tru9I TTAA 2 cut(s) 390, 786
TscAI CASTG 1 cut(s) 1086
TseFI GTSAC 2 cut(s) 494, 994
TseI GCWGC 6 cut(s) 671, 815, 1094, 1103, 1193, 1196
Tsp45I GTSAC 2 cut(s) 494, 994
TspDTI ATGAA 2 cut(s) 5, 815
TspRI CASTG 1 cut(s) 1086
VpaK11BI GGWCC 2 cut(s) 626, 846
XapI RAATTY 1 cut(s) 328
XcmI CCANNNNNNNNNTGG 3 cut(s) 212, 636, 838
XmiI GTMKAC 1 cut(s) 87
XspI CTAG 2 cut(s) 738, 834
Zsp2I ATGCAT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.