pycom13g25750
ERF Family

Belongs to the protein kinase superfamily. Tyr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
22491606 .. 22495300
3695 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g25750.2

Sequence Viewer

Length: 1176 bp
ATGCAGGCGCATGCTCCCCCCCCTGGTTACTTTGTACGATTGGAGGATACAAGTGCTGAGGACGATTTATACTTGAGGAAGAAAGTCAGGATGCGCAGGTGGCTCTGTTGTACTTGTCACGTCGAAGAGTCTTATCCATCAAACGAAAATGAACACCTGAAGAGCCCAAAGCACTATGCAGATGGGAACCAAAAAGGATCTAAGGTGTCAGCTCCTGTAAAATCTGAAGTACAGAAGGCTGCTCCACCTATTGAAGTGCCTCAATTATCTGTGGAGGAGCTAAAAGAGAAGACTGACAATTTTGGATCCAAATCATCGATCGGTGAAGGTTCGTATGGGAGAGTATATTATGCAAGCTTGAATGATGGTAAAGCTGTGGCCGTGAAGAAGCTTGATGTTGCCTCTGAACCTGAGACAAATGTTGAGTTTTTGACCCAGGTTTCCATGGTTTCAAGACTGAAGCACGAAAATCTTGTTGAGTTGCTTGGTTACTGCGTTGATGGAAGTCTGCGTGTTTTGGCTTATGAGTTTGCAACCATGGGATCTCTACACGACATATTACATGGTAGAAAGGGAGTTCAAGGGGCTCAACCTGGCCCTACACTAGACTGGATGCAGCGGGTAAAAATTGCAGTTGATGCAGCTAGGGGGTTAGAATACTTACACGAGAAGGTTCAACCTGCTATCATACACAGAGATATAAGATCTAGCAATGTGCTTCTCTTTGAAGATTTTAAAGCCAAGATAGCGGATTTTAATCTGTCAAATCAGGCTCCTGATATGGCTGCTCGTCTTCATTCTACTCGAGTTTTGGGAACATTTGGTTATCATGCCCCAGAGTATGCAATGACTGGTCAATTGACACAGAAGAGTGATGTGTACAGCTTTGGAGTGGTTCTACTAGAACTACTGACTGGGAGGAAACCTGTTGATCATACAATGCCTCGTGGACAGCAGAGTCTTGTTACTTGGGCTACTCCAAGATTGAGCGAAGACAAAGTTAAACAATGTGTTGATCCAAAGCTAAAGGAGTATCCTCCTAAGGGGGTCGCTAAGCTGGCAGCTGTTGCAGCATTGTGTGTGCAATATGAAGCTGAGTTCCGGCCAAATATGAGCATTGTTGTGAAGGCTCTTCAACCGCTTCTGAAGCCACCAGCACCGGCTCCGGAGTCTTGA

Protein Analysis

392

Amino Acids

43.37

Weight (kDa)

8.08

Isoelectric Point (pI)

34.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 87
AasI GACNNNNNNGTC 1 cut(s) 957
Acc16I TGCGCA 1 cut(s) 95
Acc36I ACCTGC 2 cut(s) 87, 688
AccIII TCCGGA 1 cut(s) 1165
AciI CCGC 3 cut(s) 619, 749, 1139
AclWI GGATC 5 cut(s) 205, 300, 313, 550, 1010
AcoI YGGCCR 2 cut(s) 378, 1103
AcuI CTGAAG 4 cut(s) 179, 246, 479, 1166
AfaI GTAC 4 cut(s) 36, 112, 231, 881
AfiI CCNNNNNNNGG 2 cut(s) 23, 1043
AgsI TTSAA 7 cut(s) 254, 361, 453, 581, 677, 728, 1136
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 3 cut(s) 22, 435, 592
Alw26I GTCTC 1 cut(s) 407
AlwI GGATC 5 cut(s) 205, 300, 313, 550, 1010
AlwNI CAGNNNCTG 1 cut(s) 215
Ama87I CYCGRG 1 cut(s) 804
Aor13HI TCCGGA 1 cut(s) 1165
AoxI GGCC 3 cut(s) 378, 595, 1103
ApeKI GCWGC 6 cut(s) 239, 616, 641, 785, 1061, 1070
AspLEI GCGC 2 cut(s) 10, 96
AspS9I GGNCC 1 cut(s) 596
AsuHPI GGTGA 1 cut(s) 335
AvaI CYCGRG 1 cut(s) 804
AxyI CCTNAGG 1 cut(s) 1041
BamHI GGATCC 1 cut(s) 305
BanII GRGCYC 2 cut(s) 167, 589
BauI CACGAG 2 cut(s) 665, 945
BbsI GAAGAC 3 cut(s) 296, 785, 999
BbvCI CCTCAGC 1 cut(s) 57
BbvI GCAGC 6 cut(s) 226, 628, 653, 772, 1073, 1082
BccI CCATC 4 cut(s) 145, 176, 359, 494
BceAI ACGGC 1 cut(s) 365
BciT130I CCWGG 3 cut(s) 24, 437, 594
BciVI GTATCC 2 cut(s) 40, 1044
BclI TGATCA 1 cut(s) 931
BcoDI GTCTC 1 cut(s) 407
BfaI CTAG 4 cut(s) 605, 645, 708, 902
BfuAI ACCTGC 2 cut(s) 87, 688
BfuI GTATCC 2 cut(s) 40, 1044
BglII AGATCT 1 cut(s) 704
BisI GCNGC 6 cut(s) 240, 617, 642, 786, 1062, 1071
BlpI GCTNAGC 1 cut(s) 1053
BlsI GCNGC 6 cut(s) 241, 618, 643, 787, 1063, 1072
Bme1390I CCNGG 3 cut(s) 24, 437, 594
BmeT110I CYCGRG 1 cut(s) 804
BmgBI CACGTC 1 cut(s) 121
BmgT120I GGNCC 1 cut(s) 596
BmiI GGNNCC 4 cut(s) 188, 307, 774, 1164
BmrFI CCNGG 3 cut(s) 24, 437, 594
BmrI ACTGGG 1 cut(s) 924
BmsI GCATC 3 cut(s) 81, 603, 628
BmuI ACTGGG 1 cut(s) 924
BpiI GAAGAC 3 cut(s) 296, 785, 999
Bpu10I CCTNAGC 1 cut(s) 57
Bpu1102I GCTNAGC 1 cut(s) 1053
BpuEI CTTGAG 1 cut(s) 94
Bsa29I ATCGAT 1 cut(s) 317
BsaBI GATNNNNATC 2 cut(s) 310, 756
BsaJI CCNNGG 4 cut(s) 22, 435, 444, 537
BsaWI WCCGGW 1 cut(s) 1165
Bsc4I CCNNNNNNNGG 2 cut(s) 23, 1043
Bse118I RCCGGY 1 cut(s) 1159
Bse1I ACTGG 3 cut(s) 614, 856, 919
Bse21I CCTNAGG 1 cut(s) 1041
Bse3DI GCAATG 2 cut(s) 718, 852
Bse8I GATNNNNATC 2 cut(s) 310, 756
BseAI TCCGGA 1 cut(s) 1165
BseBI CCWGG 3 cut(s) 24, 437, 594
BseCI ATCGAT 1 cut(s) 317
BseDI CCNNGG 4 cut(s) 22, 435, 444, 537
BseGI GGATG 2 cut(s) 96, 618
BseJI GATNNNNATC 2 cut(s) 310, 756
BseLI CCNNNNNNNGG 2 cut(s) 23, 1043
BseMI GCAATG 2 cut(s) 718, 852
BseMII CTCAG 3 cut(s) 48, 402, 1086
BseNI ACTGG 3 cut(s) 614, 856, 919
BseRI GAGGAG 1 cut(s) 290
BseXI GCAGC 6 cut(s) 226, 628, 653, 772, 1073, 1082
Bsh1285I CGRYCG 1 cut(s) 321
BshFI GGCC 3 cut(s) 380, 597, 1105
BshVI ATCGAT 1 cut(s) 317
BsiEI CGRYCG 1 cut(s) 321
BsiHKCI CYCGRG 1 cut(s) 804
BsiSI CCGG 3 cut(s) 1102, 1160, 1166
BslI CCNNNNNNNGG 2 cut(s) 23, 1043
BsmAI GTCTC 1 cut(s) 407
BsnI GGCC 3 cut(s) 380, 597, 1105
BsoBI CYCGRG 1 cut(s) 804
Bsp1286I GDGCHC 2 cut(s) 167, 589
Bsp13I TCCGGA 1 cut(s) 1165
Bsp1407I TGTACA 1 cut(s) 879
Bsp143I GATC 7 cut(s) 197, 305, 318, 542, 704, 931, 1015
Bsp1720I GCTNAGC 1 cut(s) 1053
Bsp19I CCATGG 2 cut(s) 444, 537
BspACI CCGC 3 cut(s) 619, 749, 1139
BspANI GGCC 3 cut(s) 380, 597, 1105
BspCNI CTCAG 3 cut(s) 49, 403, 1087
BspDI ATCGAT 1 cut(s) 317
BspEI TCCGGA 1 cut(s) 1165
BspLI GGNNCC 4 cut(s) 188, 307, 774, 1164
BspMI ACCTGC 2 cut(s) 87, 688
BspPI GGATC 5 cut(s) 205, 300, 313, 550, 1010
BspQI GCTCTTC 2 cut(s) 155, 1137
BsrDI GCAATG 2 cut(s) 718, 852
BsrFI RCCGGY 1 cut(s) 1159
BsrGI TGTACA 1 cut(s) 879
BsrI ACTGG 3 cut(s) 614, 856, 919
BssAI RCCGGY 1 cut(s) 1159
BssECI CCNNGG 4 cut(s) 22, 435, 444, 537
BssMI GATC 7 cut(s) 197, 305, 318, 542, 704, 931, 1015
BssSI CACGAG 2 cut(s) 665, 945
BssT1I CCWWGG 2 cut(s) 444, 537
Bst2BI CACGAG 2 cut(s) 665, 945
Bst2UI CCWGG 3 cut(s) 24, 437, 594
Bst6I CTCTTC 4 cut(s) 120, 155, 863, 1137
BstAPI GCANNNNNTGC 2 cut(s) 638, 1067
BstAUI TGTACA 1 cut(s) 879
BstC8I GCNNGC 4 cut(s) 6, 12, 355, 1059
BstDEI CTNAG 6 cut(s) 57, 201, 411, 1041, 1053, 1095
BstDSI CCRYGG 2 cut(s) 444, 537
BstF5I GGATG 2 cut(s) 96, 618
BstHHI GCGC 2 cut(s) 10, 96
BstKTI GATC 7 cut(s) 200, 308, 321, 545, 707, 934, 1018
BstMAI GTCTC 1 cut(s) 407
BstMBI GATC 7 cut(s) 197, 305, 318, 542, 704, 931, 1015
BstMCI CGRYCG 1 cut(s) 321
BstMWI GCNNNNNNNGC 7 cut(s) 100, 638, 746, 1058, 1067, 1070, 1147
BstNI CCWGG 3 cut(s) 24, 437, 594
BstNSI RCATGY 1 cut(s) 14
BstSCI CCNGG 3 cut(s) 22, 435, 592
BstV1I GCAGC 6 cut(s) 226, 628, 653, 772, 1073, 1082
BstV2I GAAGAC 3 cut(s) 296, 785, 999
BstX2I RGATCY 4 cut(s) 197, 305, 542, 704
BstYI RGATCY 4 cut(s) 197, 305, 542, 704
Bsu15I ATCGAT 1 cut(s) 317
Bsu36I CCTNAGG 1 cut(s) 1041
BsuI GTATCC 2 cut(s) 40, 1044
BsuRI GGCC 3 cut(s) 380, 597, 1105
BsuTUI ATCGAT 1 cut(s) 317
BtgI CCRYGG 2 cut(s) 444, 537
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 2 cut(s) 96, 618
BveI ACCTGC 2 cut(s) 87, 688
Cac8I GCNNGC 4 cut(s) 6, 12, 355, 1059
CaiI CAGNNNCTG 1 cut(s) 215
CfoI GCGC 2 cut(s) 10, 96
Cfr10I RCCGGY 1 cut(s) 1159
Cfr13I GGNCC 1 cut(s) 596
ClaI ATCGAT 1 cut(s) 317
Csp6I GTAC 4 cut(s) 35, 111, 230, 880
CviAII CATG 5 cut(s) 11, 445, 538, 563, 830
CviQI GTAC 4 cut(s) 35, 111, 230, 880
DdeI CTNAG 6 cut(s) 57, 201, 411, 1041, 1053, 1095
DpnI GATC 7 cut(s) 199, 307, 320, 544, 706, 933, 1017
DpnII GATC 7 cut(s) 197, 305, 318, 542, 704, 931, 1015
DraI TTTAAA 1 cut(s) 736
DrdI GACNNNNNNGTC 1 cut(s) 957
DseDI GACNNNNNNGTC 1 cut(s) 957
EaeI YGGCCR 2 cut(s) 378, 1103
Eam1104I CTCTTC 4 cut(s) 120, 155, 863, 1137
EarI CTCTTC 4 cut(s) 120, 155, 863, 1137
Eco130I CCWWGG 2 cut(s) 444, 537
Eco24I GRGCYC 2 cut(s) 167, 589
Eco57I CTGAAG 4 cut(s) 179, 246, 479, 1166
Eco81I CCTNAGG 1 cut(s) 1041
Eco88I CYCGRG 1 cut(s) 804
EcoRII CCWGG 3 cut(s) 22, 435, 592
EcoT14I CCWWGG 2 cut(s) 444, 537
EcoT38I GRGCYC 2 cut(s) 167, 589
ErhI CCWWGG 2 cut(s) 444, 537
FaeI CATG 5 cut(s) 14, 448, 541, 566, 833
FatI CATG 5 cut(s) 10, 444, 537, 562, 829
FauI CCCGC 1 cut(s) 612
FbaI TGATCA 1 cut(s) 931
Fnu4HI GCNGC 6 cut(s) 240, 617, 642, 786, 1062, 1071
FokI GGATG 2 cut(s) 103, 625
FriOI GRGCYC 2 cut(s) 167, 589
Fsp4HI GCNGC 6 cut(s) 240, 617, 642, 786, 1062, 1071
FspBI CTAG 4 cut(s) 605, 645, 708, 902
FspI TGCGCA 1 cut(s) 95
GlaI GCGC 2 cut(s) 9, 95
GluI GCNGC 6 cut(s) 240, 617, 642, 786, 1062, 1071
HaeIII GGCC 3 cut(s) 380, 597, 1105
HapII CCGG 3 cut(s) 1102, 1160, 1166
HhaI GCGC 2 cut(s) 10, 96
Hin1II CATG 5 cut(s) 14, 448, 541, 566, 833
Hin6I GCGC 2 cut(s) 8, 94
HinP1I GCGC 2 cut(s) 8, 94
HindIII AAGCTT 2 cut(s) 355, 389
HinfI GANTC 3 cut(s) 128, 958, 1169
HpaII CCGG 3 cut(s) 1102, 1160, 1166
HphI GGTGA 1 cut(s) 335
Hpy166II GTNNAC 2 cut(s) 880, 950
Hpy188I TCNGA 3 cut(s) 226, 406, 1146
Hpy188III TCNNGA 5 cut(s) 88, 453, 776, 1166, 1173
Hpy8I GTNNAC 2 cut(s) 880, 950
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 4 cut(s) 229, 320, 664, 1120
HpyCH4IV ACGT 1 cut(s) 120
HpyF10VI GCNNNNNNNGC 7 cut(s) 100, 638, 746, 1058, 1067, 1070, 1147
HpyF3I CTNAG 6 cut(s) 57, 201, 411, 1041, 1053, 1095
HpySE526I ACGT 1 cut(s) 120
Hsp92II CATG 5 cut(s) 14, 448, 541, 566, 833
HspAI GCGC 2 cut(s) 8, 94
Kpn2I TCCGGA 1 cut(s) 1165
Ksp22I TGATCA 1 cut(s) 931
Kzo9I GATC 7 cut(s) 197, 305, 318, 542, 704, 931, 1015
LguI GCTCTTC 2 cut(s) 155, 1137
LmnI GCTCC 6 cut(s) 19, 217, 247, 277, 778, 1168
Lsp1109I GCAGC 6 cut(s) 226, 628, 653, 772, 1073, 1082
LweI GCATC 3 cut(s) 81, 603, 628
MaeI CTAG 4 cut(s) 605, 645, 708, 902
MaeII ACGT 1 cut(s) 120
MaeIII GTNAC 4 cut(s) 26, 116, 488, 964
MalI GATC 7 cut(s) 199, 307, 320, 544, 706, 933, 1017
MboI GATC 7 cut(s) 197, 305, 318, 542, 704, 931, 1015
MfeI CAATTG 1 cut(s) 857
MflI RGATCY 4 cut(s) 197, 305, 542, 704
MhlI GDGCHC 2 cut(s) 167, 589
MluCI AATT 4 cut(s) 263, 298, 627, 857
MlyI GAGTC 2 cut(s) 137, 967
MnlI CCTC 9 cut(s) 37, 52, 69, 268, 270, 412, 912, 954, 1047
MroI TCCGGA 1 cut(s) 1165
MseI TTAA 3 cut(s) 735, 756, 1002
MslI CAYNNNNRTG 1 cut(s) 1121
MspA1I CMGCKG 2 cut(s) 619, 1064
MspI CCGG 3 cut(s) 1102, 1160, 1166
MspR9I CCNGG 3 cut(s) 24, 437, 594
MunI CAATTG 1 cut(s) 857
MvaI CCWGG 3 cut(s) 24, 437, 594
MwoI GCNNNNNNNGC 7 cut(s) 100, 638, 746, 1058, 1067, 1070, 1147
NcoI CCATGG 2 cut(s) 444, 537
NdeII GATC 7 cut(s) 197, 305, 318, 542, 704, 931, 1015
NlaIII CATG 5 cut(s) 14, 448, 541, 566, 833
NlaIV GGNNCC 4 cut(s) 188, 307, 774, 1164
NmuCI GTSAC 1 cut(s) 116
NsbI TGCGCA 1 cut(s) 95
NspI RCATGY 1 cut(s) 14
PaeI GCATGC 1 cut(s) 14
PaeR7I CTCGAG 1 cut(s) 804
PaqCI CACCTGC 1 cut(s) 87
PciSI GCTCTTC 2 cut(s) 155, 1137
PkrI GCNGC 6 cut(s) 241, 618, 643, 787, 1063, 1072
Ple19I CGATCG 1 cut(s) 321
PleI GAGTC 2 cut(s) 136, 966
PpsI GAGTC 2 cut(s) 136, 966
Psp6I CCWGG 3 cut(s) 22, 435, 592
PspGI CCWGG 3 cut(s) 22, 435, 592
PspN4I GGNNCC 4 cut(s) 188, 307, 774, 1164
PspPI GGNCC 1 cut(s) 596
PspXI VCTCGAGB 1 cut(s) 804
PstNI CAGNNNCTG 1 cut(s) 215
PsuI RGATCY 4 cut(s) 197, 305, 542, 704
PvuI CGATCG 1 cut(s) 321
PvuII CAGCTG 1 cut(s) 1064
RsaI GTAC 4 cut(s) 36, 112, 231, 881
RsaNI GTAC 4 cut(s) 35, 111, 230, 880
RseI CAYNNNNRTG 1 cut(s) 1121
SapI GCTCTTC 2 cut(s) 155, 1137
SaqAI TTAA 3 cut(s) 735, 756, 1002
SatI GCNGC 6 cut(s) 240, 617, 642, 786, 1062, 1071
Sau3AI GATC 7 cut(s) 197, 305, 318, 542, 704, 931, 1015
Sau96I GGNCC 1 cut(s) 596
SchI GAGTC 2 cut(s) 137, 967
ScrFI CCNGG 3 cut(s) 24, 437, 594
SduI GDGCHC 2 cut(s) 167, 589
SfaNI GCATC 3 cut(s) 81, 603, 628
Sfr274I CTCGAG 1 cut(s) 804
SlaI CTCGAG 1 cut(s) 804
SmiMI CAYNNNNRTG 1 cut(s) 1121
SmlI CTYRAG 2 cut(s) 73, 804
SmoI CTYRAG 2 cut(s) 73, 804
SphI GCATGC 1 cut(s) 14
Sse9I AATT 4 cut(s) 263, 298, 627, 857
SsiI CCGC 3 cut(s) 619, 749, 1139
SspMI CTAG 4 cut(s) 605, 645, 708, 902
StyD4I CCNGG 3 cut(s) 22, 435, 592
StyI CCWWGG 2 cut(s) 444, 537
TaiI ACGT 1 cut(s) 123
TaqI TCGA 3 cut(s) 123, 317, 805
TasI AATT 4 cut(s) 263, 298, 627, 857
TatI WGTACW 3 cut(s) 110, 229, 879
Tru1I TTAA 3 cut(s) 735, 756, 1002
Tru9I TTAA 3 cut(s) 735, 756, 1002
TseFI GTSAC 1 cut(s) 116
TseI GCWGC 6 cut(s) 239, 616, 641, 785, 1061, 1070
Tsp45I GTSAC 1 cut(s) 116
TspDTI ATGAA 3 cut(s) 165, 785, 1104
XceI RCATGY 1 cut(s) 14
XhoI CTCGAG 1 cut(s) 804
XspI CTAG 4 cut(s) 605, 645, 708, 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.