RLG00000008720
ERF Family

Belongs to the protein kinase superfamily. Tyr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
35729540 .. 35736345
6806 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008720

Sequence Viewer

Length: 1383 bp
ATGGACCAGAAATTCAGCTGCGTTCTACCATATCTTTCACTGAGTTTCTCAAGTGCTTTAACAGAGATAAGCAGCAACAGCCAAAGCCAAAGCCCCTCCCAAATCCTACCTGTCCCTCCCTCCTCCTTAACCAACCTCACAAACCCTAAAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAACCAAATAGAGACACATTTACAGGCACATGCCCCTCCCCCTGGTTACTTTGTGAGGCTTGAGAATACAAGCACTGACGACGATTTTTATTTGAGGAAGAAAGTCAGGATGCGCAGGTGGCTTTGTTGTTCTTGTCATGTGGAGGAGTCTTATCCCGCACATGAAAATGAACACCTGAAGAGCCCAAGGAGTTATGATGGGAACAATAAGGGCACTAAGGTGTCCACTCCTTTGAAGTCTGATGTACAAAAGGCAGCACCACCTATTGAAGTCCCTCCATTGTCTCTGGAGGAGCTGAAAGAGAAGACTGACAATTTTGGATCTAAGTCACTGATCGGCGAAGGATCATATGGGAGAGTATACTATGCAAGCATGGATGATGGTAAAGCTGTTGCTGTCAAGAAGCTTGACGTTGCATCTGAGCCCGAGTCAAATGTTGAGTTTCTGACCCAGGTTTCCATGGTTTCTAGACTGAAGCACGACAATCTTGTTGAGTTGCTTGGTTACTGTGTTGAAGGAAGTCTGCGAGTGCTTGCGTATGAGTTTGCCACCATGGGTTCTCTGCATGACATATTGCATGGTAGAAAGGGCGTTCAAGGGGCGCAACCTGGTCCAACACTTGACTGGATGCAGCGTGTGAGAATTGCAGTTGATGCAGCCAGGGGGTTGGAATACTTGCATGAGAAGGTTCAACCTCCTATTATACATAGAGATATCAGATCTAGTAACGTGCTTCTCTTTGAAGATTTCAAAGCCAAGATAGCAGATTTTAATCTTTCAAATCAGGCTCCTGATATGGCTGCTCGTCTTCATTCCACTCGAGTTTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACTGGTCAATTGACACAGAAGAGTGATGTCTACAGCTTTGGAGTAGTTCTTCTAGAGCTTCTGACTGGGAGGAAACCTGTTGATCATACAATGCCCCGTGGACAGCAGAGTCTTGTGACTTGGGCTACTCCAAGATTGAGTGAAGATAAGGTTAAACAATGTGTAGATCCTAAGCTGAAGGGAGAATATCCTCCGAAAGGAGTCGCAAAGCTAGCAGCTGTGGCAGCTTTGTGTGTACAATATGAAGCTGAGTTCCGGCCAAATATGAGCATTGTTGTTAAGGCGCTACAACCGCTTCTAAAGCCACCTGCACCAGCTCCAGAGTCATGA

Protein Analysis

461

Amino Acids

51.37

Weight (kDa)

8.04

Isoelectric Point (pI)

42.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 172 - 384 1.1e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 173 - 447 7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 294, 1369
AasI GACNNNNNNGTC 1 cut(s) 1161
Acc16I TGCGCA 1 cut(s) 302
Acc36I ACCTGC 2 cut(s) 294, 1369
AccI GTMKAC 2 cut(s) 549, 1083
AciI CCGC 2 cut(s) 345, 1346
AclWI GGATC 3 cut(s) 517, 541, 1214
AcoI YGGCCR 1 cut(s) 1310
AcsI RAATTY 1 cut(s) 11
AcuI CTGAAG 3 cut(s) 386, 683, 1250
AfaI GTAC 2 cut(s) 435, 1290
AfiI CCNNNNNNNGG 2 cut(s) 230, 1250
AgsI TTSAA 8 cut(s) 424, 458, 704, 785, 881, 932, 940, 969
AjnI CCWGG 4 cut(s) 229, 639, 796, 848
AleI CACNNNNGTG 1 cut(s) 407
Alw26I GTCTC 2 cut(s) 194, 477
AlwI GGATC 3 cut(s) 517, 541, 1214
Ama87I CYCGRG 2 cut(s) 614, 1008
AoxI GGCC 1 cut(s) 1310
ApeKI GCWGC 8 cut(s) 18, 72, 443, 820, 845, 989, 1268, 1277
ApoI RAATTY 1 cut(s) 11
AspLEI GCGC 3 cut(s) 303, 793, 1339
AspS9I GGNCC 2 cut(s) 4, 800
AsuNHI GCTAGC 1 cut(s) 1264
AvaI CYCGRG 2 cut(s) 614, 1008
AvaII GGWCC 2 cut(s) 4, 800
BaeGI GKGCMC 1 cut(s) 404
BanII GRGCYC 2 cut(s) 374, 615
BbsI GAAGAC 2 cut(s) 500, 989
BbvI GCAGC 8 cut(s) 5, 84, 455, 832, 857, 976, 1280, 1289
BccI CCATC 2 cut(s) 380, 563
BciT130I CCWGG 4 cut(s) 231, 641, 798, 850
BclI TGATCA 1 cut(s) 1135
BcoDI GTCTC 2 cut(s) 194, 477
BfaI CTAG 4 cut(s) 657, 912, 1106, 1265
BfmI CTRYAG 1 cut(s) 1084
BfoI RGCGCY 1 cut(s) 1340
BfuAI ACCTGC 2 cut(s) 294, 1369
BglII AGATCT 1 cut(s) 908
BisI GCNGC 8 cut(s) 19, 73, 444, 821, 846, 990, 1269, 1278
BlsI GCNGC 8 cut(s) 20, 74, 445, 822, 847, 991, 1270, 1279
Bme1390I CCNGG 4 cut(s) 231, 641, 798, 850
Bme18I GGWCC 2 cut(s) 4, 800
BmeT110I CYCGRG 2 cut(s) 614, 1008
BmgT120I GGNCC 2 cut(s) 4, 800
BmiI GGNNCC 1 cut(s) 978
BmrFI CCNGG 4 cut(s) 231, 641, 798, 850
BmrI ACTGGG 1 cut(s) 1128
BmsI GCATC 4 cut(s) 288, 614, 807, 832
BmtI GCTAGC 1 cut(s) 1268
BmuI ACTGGG 1 cut(s) 1128
BpiI GAAGAC 2 cut(s) 500, 989
BpmI CTGGAG 3 cut(s) 497, 1023, 1356
Bpu10I CCTNAGC 1 cut(s) 1224
BpuEI CTTGAG 2 cut(s) 34, 269
BsaBI GATNNNNATC 1 cut(s) 960
BsaJI CCNNGG 7 cut(s) 229, 374, 639, 648, 741, 849, 1150
Bsc4I CCNNNNNNNGG 2 cut(s) 230, 1250
Bse1I ACTGG 3 cut(s) 818, 1060, 1123
Bse3DI GCAATG 1 cut(s) 1056
Bse8I GATNNNNATC 1 cut(s) 960
BseBI CCWGG 4 cut(s) 231, 641, 798, 850
BseDI CCNNGG 7 cut(s) 229, 374, 639, 648, 741, 849, 1150
BseGI GGATG 3 cut(s) 303, 571, 822
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 2 cut(s) 230, 1250
BseMI GCAATG 1 cut(s) 1056
BseMII CTCAG 3 cut(s) 32, 600, 1293
BseNI ACTGG 3 cut(s) 818, 1060, 1123
BseRI GAGGAG 3 cut(s) 112, 347, 494
BseSI GKGCMC 1 cut(s) 404
BseXI GCAGC 8 cut(s) 5, 84, 455, 832, 857, 976, 1280, 1289
BsgI GTGCAG 1 cut(s) 1347
BshFI GGCC 1 cut(s) 1312
BsiHKCI CYCGRG 2 cut(s) 614, 1008
BsiSI CCGG 1 cut(s) 1309
BslFI GGGAC 2 cut(s) 98, 446
BslI CCNNNNNNNGG 2 cut(s) 230, 1250
BsmAI GTCTC 2 cut(s) 194, 477
BsmFI GGGAC 2 cut(s) 98, 446
BsnI GGCC 1 cut(s) 1312
BsoBI CYCGRG 2 cut(s) 614, 1008
Bsp1286I GDGCHC 3 cut(s) 374, 404, 615
Bsp1407I TGTACA 2 cut(s) 433, 1288
Bsp143I GATC 6 cut(s) 509, 522, 533, 908, 1135, 1219
Bsp19I CCATGG 2 cut(s) 648, 741
BspACI CCGC 2 cut(s) 345, 1346
BspANI GGCC 1 cut(s) 1312
BspCNI CTCAG 3 cut(s) 33, 601, 1294
BspHI TCATGA 1 cut(s) 1379
BspLI GGNNCC 1 cut(s) 978
BspMI ACCTGC 2 cut(s) 294, 1369
BspOI GCTAGC 1 cut(s) 1268
BspPI GGATC 3 cut(s) 517, 541, 1214
BspQI GCTCTTC 1 cut(s) 362
BsrDI GCAATG 1 cut(s) 1056
BsrGI TGTACA 2 cut(s) 433, 1288
BsrI ACTGG 3 cut(s) 818, 1060, 1123
BssECI CCNNGG 7 cut(s) 229, 374, 639, 648, 741, 849, 1150
BssMI GATC 6 cut(s) 509, 522, 533, 908, 1135, 1219
BssNAI GTATAC 1 cut(s) 550
BssT1I CCWWGG 3 cut(s) 374, 648, 741
Bst1107I GTATAC 1 cut(s) 550
Bst2UI CCWGG 4 cut(s) 231, 641, 798, 850
Bst4CI ACNGT 1 cut(s) 698
Bst6I CTCTTC 2 cut(s) 362, 1067
BstAPI GCANNNNNTGC 1 cut(s) 842
BstAUI TGTACA 2 cut(s) 433, 1288
BstC8I GCNNGC 3 cut(s) 559, 723, 1266
BstDEI CTNAG 6 cut(s) 41, 405, 513, 609, 1224, 1302
BstDSI CCRYGG 3 cut(s) 648, 741, 1150
BstENI CCTNNNNNAGG 1 cut(s) 1248
BstF5I GGATG 3 cut(s) 303, 571, 822
BstH2I RGCGCY 1 cut(s) 1340
BstHHI GCGC 3 cut(s) 303, 793, 1339
BstKTI GATC 6 cut(s) 512, 525, 536, 911, 1138, 1222
BstMAI GTCTC 2 cut(s) 194, 477
BstMBI GATC 6 cut(s) 509, 522, 533, 908, 1135, 1219
BstMWI GCNNNNNNNGC 9 cut(s) 78, 307, 842, 950, 1265, 1274, 1277, 1345, 1354
BstNI CCWGG 4 cut(s) 231, 641, 798, 850
BstNSI RCATGY 1 cut(s) 221
BstSCI CCNGG 4 cut(s) 229, 639, 796, 848
BstSFI CTRYAG 1 cut(s) 1084
BstSLI GKGCMC 1 cut(s) 404
BstV1I GCAGC 8 cut(s) 5, 84, 455, 832, 857, 976, 1280, 1289
BstV2I GAAGAC 2 cut(s) 500, 989
BstX2I RGATCY 3 cut(s) 509, 908, 1219
BstXI CCANNNNNNTGG 1 cut(s) 856
BstYI RGATCY 3 cut(s) 509, 908, 1219
BstZ17I GTATAC 1 cut(s) 550
BsuRI GGCC 1 cut(s) 1312
BtgI CCRYGG 3 cut(s) 648, 741, 1150
BtsCI GGATG 3 cut(s) 303, 571, 822
BtsIMutI CAGTG 3 cut(s) 38, 261, 518
BveI ACCTGC 2 cut(s) 294, 1369
Cac8I GCNNGC 3 cut(s) 559, 723, 1266
CciI TCATGA 1 cut(s) 1379
CfoI GCGC 3 cut(s) 303, 793, 1339
Cfr13I GGNCC 2 cut(s) 4, 800
CsiI ACCWGGT 1 cut(s) 796
Csp6I GTAC 2 cut(s) 434, 1289
CviQI GTAC 2 cut(s) 434, 1289
DdeI CTNAG 6 cut(s) 41, 405, 513, 609, 1224, 1302
DpnI GATC 6 cut(s) 511, 524, 535, 910, 1137, 1221
DpnII GATC 6 cut(s) 509, 522, 533, 908, 1135, 1219
DrdI GACNNNNNNGTC 1 cut(s) 1161
DseDI GACNNNNNNGTC 1 cut(s) 1161
EaeI YGGCCR 1 cut(s) 1310
Eam1104I CTCTTC 2 cut(s) 362, 1067
EarI CTCTTC 2 cut(s) 362, 1067
Eco130I CCWWGG 3 cut(s) 374, 648, 741
Eco24I GRGCYC 2 cut(s) 374, 615
Eco32I GATATC 1 cut(s) 904
Eco47I GGWCC 2 cut(s) 4, 800
Eco57I CTGAAG 3 cut(s) 386, 683, 1250
Eco88I CYCGRG 2 cut(s) 614, 1008
EcoNI CCTNNNNNAGG 1 cut(s) 1248
EcoRII CCWGG 4 cut(s) 229, 639, 796, 848
EcoRV GATATC 1 cut(s) 904
EcoT14I CCWWGG 3 cut(s) 374, 648, 741
EcoT38I GRGCYC 2 cut(s) 374, 615
ErhI CCWWGG 3 cut(s) 374, 648, 741
FaqI GGGAC 2 cut(s) 98, 446
FauI CCCGC 1 cut(s) 352
FauNDI CATATG 1 cut(s) 538
FbaI TGATCA 1 cut(s) 1135
FblI GTMKAC 2 cut(s) 549, 1083
Fnu4HI GCNGC 8 cut(s) 19, 73, 444, 821, 846, 990, 1269, 1278
FokI GGATG 3 cut(s) 310, 578, 829
FriOI GRGCYC 2 cut(s) 374, 615
Fsp4HI GCNGC 8 cut(s) 19, 73, 444, 821, 846, 990, 1269, 1278
FspBI CTAG 4 cut(s) 657, 912, 1106, 1265
FspI TGCGCA 1 cut(s) 302
GlaI GCGC 3 cut(s) 302, 792, 1338
GluI GCNGC 8 cut(s) 19, 73, 444, 821, 846, 990, 1269, 1278
GsuI CTGGAG 3 cut(s) 497, 1023, 1356
HaeII RGCGCY 1 cut(s) 1340
HaeIII GGCC 1 cut(s) 1312
HapII CCGG 1 cut(s) 1309
HhaI GCGC 3 cut(s) 303, 793, 1339
Hin6I GCGC 3 cut(s) 301, 791, 1337
HinP1I GCGC 3 cut(s) 301, 791, 1337
HindIII AAGCTT 1 cut(s) 593
HinfI GANTC 5 cut(s) 335, 617, 1162, 1254, 1376
HpaII CCGG 1 cut(s) 1309
Hpy166II GTNNAC 5 cut(s) 414, 550, 1084, 1154, 1289
Hpy188I TCNGA 6 cut(s) 430, 610, 636, 908, 1116, 1248
Hpy188III TCNNGA 9 cut(s) 295, 476, 589, 657, 980, 1040, 1106, 1373, 1380
Hpy8I GTNNAC 5 cut(s) 414, 550, 1084, 1154, 1289
Hpy99I CGWCG 1 cut(s) 272
HpyAV CCTTC 4 cut(s) 524, 698, 868, 1225
HpyCH4III ACNGT 1 cut(s) 698
HpyCH4IV ACGT 2 cut(s) 600, 918
HpyF10VI GCNNNNNNNGC 9 cut(s) 78, 307, 842, 950, 1265, 1274, 1277, 1345, 1354
HpyF3I CTNAG 6 cut(s) 41, 405, 513, 609, 1224, 1302
HpySE526I ACGT 2 cut(s) 600, 918
HspAI GCGC 3 cut(s) 301, 791, 1337
Ksp22I TGATCA 1 cut(s) 1135
Kzo9I GATC 6 cut(s) 509, 522, 533, 908, 1135, 1219
LguI GCTCTTC 1 cut(s) 362
LmnI GCTCC 4 cut(s) 481, 982, 1042, 1375
Lsp1109I GCAGC 8 cut(s) 5, 84, 455, 832, 857, 976, 1280, 1289
LweI GCATC 4 cut(s) 288, 614, 807, 832
MabI ACCWGGT 1 cut(s) 796
MaeI CTAG 4 cut(s) 657, 912, 1106, 1265
MaeII ACGT 2 cut(s) 600, 918
MaeIII GTNAC 5 cut(s) 233, 516, 692, 914, 1168
MalI GATC 6 cut(s) 511, 524, 535, 910, 1137, 1221
MboI GATC 6 cut(s) 509, 522, 533, 908, 1135, 1219
MboII GAAGA 8 cut(s) 298, 379, 505, 944, 989, 1084, 1094, 1208
MfeI CAATTG 1 cut(s) 1061
MflI RGATCY 3 cut(s) 509, 908, 1219
MhlI GDGCHC 3 cut(s) 374, 404, 615
MluCI AATT 4 cut(s) 11, 502, 831, 1061
MlyI GAGTC 4 cut(s) 344, 626, 1171, 1263
MmeI TCCRAC 2 cut(s) 827, 837
MseI TTAA 5 cut(s) 59, 128, 960, 1206, 1332
MslI CAYNNNNRTG 2 cut(s) 354, 407
MspA1I CMGCKG 2 cut(s) 18, 1271
MspI CCGG 1 cut(s) 1309
MspR9I CCNGG 4 cut(s) 231, 641, 798, 850
MunI CAATTG 1 cut(s) 1061
MvaI CCWGG 4 cut(s) 231, 641, 798, 850
MwoI GCNNNNNNNGC 9 cut(s) 78, 307, 842, 950, 1265, 1274, 1277, 1345, 1354
NcoI CCATGG 2 cut(s) 648, 741
NdeI CATATG 1 cut(s) 538
NdeII GATC 6 cut(s) 509, 522, 533, 908, 1135, 1219
NheI GCTAGC 1 cut(s) 1264
NlaIV GGNNCC 1 cut(s) 978
NmuCI GTSAC 2 cut(s) 516, 1168
NsbI TGCGCA 1 cut(s) 302
NspI RCATGY 1 cut(s) 221
OliI CACNNNNGTG 1 cut(s) 407
PaeR7I CTCGAG 1 cut(s) 1008
PagI TCATGA 1 cut(s) 1379
PaqCI CACCTGC 2 cut(s) 294, 1369
PciSI GCTCTTC 1 cut(s) 362
PkrI GCNGC 8 cut(s) 20, 74, 445, 822, 847, 991, 1270, 1279
PleI GAGTC 4 cut(s) 343, 625, 1170, 1262
PpsI GAGTC 4 cut(s) 343, 625, 1170, 1262
Psp6I CCWGG 4 cut(s) 229, 639, 796, 848
PspGI CCWGG 4 cut(s) 229, 639, 796, 848
PspN4I GGNNCC 1 cut(s) 978
PspPI GGNCC 2 cut(s) 4, 800
PspXI VCTCGAGB 1 cut(s) 1008
PsuI RGATCY 3 cut(s) 509, 908, 1219
PvuII CAGCTG 2 cut(s) 18, 1271
RsaI GTAC 2 cut(s) 435, 1290
RsaNI GTAC 2 cut(s) 434, 1289
RseI CAYNNNNRTG 2 cut(s) 354, 407
SapI GCTCTTC 1 cut(s) 362
SaqAI TTAA 5 cut(s) 59, 128, 960, 1206, 1332
SatI GCNGC 8 cut(s) 19, 73, 444, 821, 846, 990, 1269, 1278
Sau3AI GATC 6 cut(s) 509, 522, 533, 908, 1135, 1219
Sau96I GGNCC 2 cut(s) 4, 800
SchI GAGTC 4 cut(s) 344, 626, 1171, 1263
ScrFI CCNGG 4 cut(s) 231, 641, 798, 850
SduI GDGCHC 3 cut(s) 374, 404, 615
SexAI ACCWGGT 1 cut(s) 796
SfaNI GCATC 4 cut(s) 288, 614, 807, 832
SfcI CTRYAG 1 cut(s) 1084
Sfr274I CTCGAG 1 cut(s) 1008
SinI GGWCC 2 cut(s) 4, 800
SlaI CTCGAG 1 cut(s) 1008
SmiMI CAYNNNNRTG 2 cut(s) 354, 407
SmlI CTYRAG 3 cut(s) 49, 248, 1008
SmoI CTYRAG 3 cut(s) 49, 248, 1008
Sse9I AATT 4 cut(s) 11, 502, 831, 1061
SsiI CCGC 2 cut(s) 345, 1346
SspMI CTAG 4 cut(s) 657, 912, 1106, 1265
StyD4I CCNGG 4 cut(s) 229, 639, 796, 848
StyI CCWWGG 3 cut(s) 374, 648, 741
TaaI ACNGT 1 cut(s) 698
TaiI ACGT 2 cut(s) 603, 921
TaqI TCGA 1 cut(s) 1009
TasI AATT 4 cut(s) 11, 502, 831, 1061
TatI WGTACW 2 cut(s) 433, 1288
Tru1I TTAA 5 cut(s) 59, 128, 960, 1206, 1332
Tru9I TTAA 5 cut(s) 59, 128, 960, 1206, 1332
TscAI CASTG 3 cut(s) 45, 268, 525
TseFI GTSAC 2 cut(s) 516, 1168
TseI GCWGC 8 cut(s) 18, 72, 443, 820, 845, 989, 1268, 1277
Tsp45I GTSAC 2 cut(s) 516, 1168
TspDTI ATGAA 4 cut(s) 366, 372, 989, 1311
TspRI CASTG 3 cut(s) 45, 268, 525
VpaK11BI GGWCC 2 cut(s) 4, 800
XagI CCTNNNNNAGG 1 cut(s) 1248
XapI RAATTY 1 cut(s) 11
XbaI TCTAGA 2 cut(s) 656, 1105
XceI RCATGY 1 cut(s) 221
XcmI CCANNNNNNNNNTGG 2 cut(s) 810, 1012
XhoI CTCGAG 1 cut(s) 1008
XmiI GTMKAC 2 cut(s) 549, 1083
XspI CTAG 4 cut(s) 657, 912, 1106, 1265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.