Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004895

Physical Location & Seq

Genomic Coordinates Reverse (-)

12193695 .. 12197642

Gene Structure 3948 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0079700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGATTGGAACTCCCCAATCTCAGAAGGAAAACACTGTCGAGATAGTTGATTCTACTGCTGATAAGACAGTTTCTGAGGTTATTAAGACAGAGGATAGTCCACAAGACTCTGAAATTGGCCAGCCCAATCATAGTATGCTAATGCCAAAAGTCATAAGAGACTCTAAGAGTTGCAAGCAGAATATTTCAACAGGTTTAAGATCTGACATAGTCGGGGAGAACTCTTCATCTGATGTGCTTGGTGCTACAGCCTCTAACGAAGTCAAGGTGCCTAAATCTTTAGATAGCACTGGACCTGGTGAGGCTAAAAATACAATTCACTCCTCAGCAGATTTAGTTTTTTCTCCACAGAATAAGGTTGCAGTGACTGTTTCTGAAGTTAGGACAGAGAGTGTTAGGGAAAATGAATTAACAAGTGATCTGTTGCAAATAATGCGGAGAAGTTCTTTGGGGAATTCAGCTGGTCAGGTTGCATCTAATGGTAAAAGGCTGCATGGTGGTCATAAAGATGTTGAACATGGTATAAATGGAAGTTTGGTTCAAACCTTGGAACCCTTCGCGGATTCTCACAACAATGAGAAAAGGGTTACAGAAACTGCAGCTTCCAATGTAATATGGAAAAGATCTTCCAAGGATATTGGTCAATCAGGAGTCAAGACTGAGTCACATAGGCAACTTGAGGTGGGTGTGTTTGGATCTGATTTCGATTGTTTGTCTTCCTTAACACATAAGTTACCAGGTGAACCTTCTAGGATACTGCAAAAGGATATTGGAAATGCATCTGCTGTAGTTGGAAATGGAAACCCTCAACCTGGCAAAAGAACGATATTTGATCAACCACCTACTGCAGGTTCTGACGTGGGTAAAATGCCTTCATCGTCTAGTGGACCCCAGCAAGTGAGGGGGTTAGCAAAGATGTTTATGAAGACAATGAATGGTCAAAAAGCTGATGTAATTACCAGTAAGAAGAGCGATACTTTGGCTTCGAATGTAGTTTTGGAACTTTTAAATGAAACAAATGATAAAACAGGTAAAGAAGATACAGGAAATAGATTTGACATCAATGGGTTGATTGGGTGCATCAAAGAGCTGCCAAGAGAATCATCAACTATTACATCTCAGAATTGTAGCACTCCCAACAATACTGGTCTCCTCATAAAAAAGGTAGGGTCAGTTAAAAAGGTTCGAAGCCACGCAAATGTGCAACAGAGTGATGCAAAAAGAAAAGAGAGTTCGCTGAGAGTTCATGCCATGGGAAAGGAAACTAGTAAGAAAGACTTAAATAAGATCCCAGGTACTTCCTGCCAAAAAGAAGAATCTACAGAAAGCAAGGTGTTGGTTAGATTTTTGCACAAATGTGTAGAGGAAAGTGCTATATCTAAAGCCTTTGACGATTGTGGGTCTATCATGAAGATACAACTACTTCCCTTAATTGAAGGAAGCAATTTTAGAGATGGTTACGTGCATTTTAAGACTAGGGAAGGATCACATAAAGCTCTCAGGAAAAGCGAGTTGGTTATAGAGGGTGCTCATGTTGTTGTGGATGCGACTTCTTTAGAAGATGTGCCTAATAAAATTTCCATTCCCAACCTGATTGGTGATCCTGAAGTTCCTCTCATGTTAGTAAAGAATCCGACACGAACAGTTATGATCAAACAGTTGACCCATGATATAAGCTCACATCAGCTAAAAGAAGCTCTTGCTTTCTGCGGAAGTGGCATATCCAGCGTTTTCTTGGGTTCATCAAGCTCTGTTGCTTATGTGGAATTTGAGACAGAAGATGCCAAAGAGAGAGCAATGGCAGCATATTCCATAAATGTTCAAGAAAAACAGCTATTGATCTTCAGAATTGATGTGCCAAGAACAACAGTGATAAGGATAACCAATATTGATGATACAGCATTTTCTAGAAAACTGGTGCCCGGAAAAATCACATCAATTTGTAGTTCTTATGGGGAGCTGTACAAACAAAAGCTGAGAGGCAAGTCCATTTTGGATGTGTATTTCAAGCTTGCTGAATGGCCAAATATTTTGAGTATTCTCAACAGGTTAAATGGAATGGAAGTAGATGGCGGCCGATTGATTGCTCAACCTGCTCCTATTTTTCCTCCGCCGATCCTTCAAGTTCTTTGGAGTAAGCCAGATGAAAGAATTCATGTCAAATCTGTTTTGCAAAGATTGTTGCAGACCAGTGAACTACCTGTTGAACTCAGTAATATTGCTACAAAATACCACGGTGATAAATGTTTTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

751

Amino Acids

81.84

Weight (kDa)

8.45

Isoelectric Point (pI)

44.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43230 AT2G43230 AT3G59350 AT3G59350 AT3G59350 AT3G59350 AT3G59350 AT3G59350
fragaria_vesca	FvH4_4g11280 FvH4_4g11280 FvH4_4g11280
malus_domestica	MD04G1038500.v1.1 MD13G1258500.v1.1
prunus_persica	Prupe.1G189000_v2.0.a1 Prupe.1G189000_v2.0.a1
pyrus_communis	pycom13g25750
rosa_chinensis	RchiOBHm_Chr4g0407431
rosa_laevigata	RLG00000008720
rosa_multiflora	Rmu_sc0004841.1_g000042
rosa_roxburghii	Rroxscaffold_5G00352020
rosa_rugosa	Rorug04G0079700 Rorug04G0079700 Rorug04G0079800 Rorug04G0079900
rosa_samantha	Rh4AG144300 Rh4BG142200 Rh4CG150900 Rh4DG138300
rosa_wichuraiana	Rw0G014480 Rw4G011740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	839, 2101
AccB1I	GGYRCC	2 cut(s)	268, 1918
AccII	CGCG	1 cut(s)	560
AciI	CCGC	5 cut(s)	436, 560, 1710, 2073, 2111
AclWI	GGATC	5 cut(s)	703, 1282, 1492, 1595, 2110
AcoI	YGGCCR	3 cut(s)	118, 2021, 2074
AcsI	RAATTY	4 cut(s)	454, 1575, 1766, 2151
AcuI	CTGAAG	3 cut(s)	396, 1626, 1828
AfaI	GTAC	2 cut(s)	1297, 1964
AfiI	CCNNNNNNNGG	2 cut(s)	812, 848
AgsI	TTSAA	9 cut(s)	189, 515, 542, 1436, 1823, 2008, 2123, 2207, 2252
AhlI	ACTAGT	1 cut(s)	1265
AjiI	CACGTC	1 cut(s)	859
AjnI	CCWGG	4 cut(s)	295, 736, 811, 1291
AjuI	GAANNNNNNNTTGG	4 cut(s)	980, 1012, 1496, 1528
AleI	CACNNNNGTG	1 cut(s)	1356
AloI	GAACNNNNNNTCC	2 cut(s)	522, 554
Alw21I	GWGCWC	1 cut(s)	1531
Alw26I	GTCTC	3 cut(s)	153, 1154, 1766
AlwI	GGATC	5 cut(s)	703, 1282, 1492, 1595, 2110
AlwNI	CAGNNNCTG	4 cut(s)	74, 368, 596, 854
AoxI	GGCC	3 cut(s)	118, 2021, 2074
ApeKI	GCWGC	4 cut(s)	490, 599, 1090, 1802
ApoI	RAATTY	4 cut(s)	454, 1575, 1766, 2151
Asp700I	GAANNNNTTC	1 cut(s)	2151
AspS9I	GGNCC	2 cut(s)	293, 887
AsuC2I	CCSGG	1 cut(s)	1923
AsuHPI	GGTGA	4 cut(s)	311, 752, 1610, 2249
AsuII	TTCGAA	2 cut(s)	986, 1186
AvaII	GGWCC	2 cut(s)	293, 887
BaeGI	GKGCMC	1 cut(s)	1923
BalI	TGGCCA	2 cut(s)	120, 2023
BanI	GGYRCC	2 cut(s)	268, 1918
BarI	GAAGNNNNNNTAC	2 cut(s)	856, 888
BbsI	GAAGAC	2 cut(s)	708, 932
Bbv12I	GWGCWC	1 cut(s)	1531
BbvCI	CCTCAGC	1 cut(s)	325
BbvI	GCAGC	4 cut(s)	477, 611, 1077, 1814
BccI	CCATC	2 cut(s)	1448, 2063
BciT130I	CCWGG	4 cut(s)	297, 738, 813, 1293
BciVI	GTATCC	1 cut(s)	747
BclI	TGATCA	2 cut(s)	832, 1650
BcnI	CCSGG	1 cut(s)	1923
BcoDI	GTCTC	3 cut(s)	153, 1154, 1766
BcuI	ACTAGT	1 cut(s)	1265
BfaI	CTAG	5 cut(s)	750, 882, 1266, 1476, 1908
BfmI	CTRYAG	5 cut(s)	246, 597, 786, 846, 1320
BfuAI	ACCTGC	2 cut(s)	839, 2101
BfuI	GTATCC	1 cut(s)	747
BglII	AGATCT	2 cut(s)	200, 623
BisI	GCNGC	5 cut(s)	491, 600, 1091, 1803, 2074
BlsI	GCNGC	5 cut(s)	492, 601, 1092, 1804, 2075
Bme1390I	CCNGG	5 cut(s)	297, 738, 813, 1293, 1923
Bme18I	GGWCC	2 cut(s)	293, 887
BmgBI	CACGTC	1 cut(s)	859
BmgT120I	GGNCC	2 cut(s)	293, 887
BmiI	GGNNCC	4 cut(s)	270, 552, 889, 1920
BmrFI	CCNGG	5 cut(s)	297, 738, 813, 1293, 1923
BmsI	GCATC	6 cut(s)	482, 788, 1089, 1204, 1534, 1771
BpiI	GAAGAC	2 cut(s)	708, 932
Bpu10I	CCTNAGC	1 cut(s)	325
Bpu14I	TTCGAA	2 cut(s)	986, 1186
BpuEI	CTTGAG	1 cut(s)	698
BpuMI	CCSGG	1 cut(s)	1923
BsaAI	YACGTR	1 cut(s)	1462
BsaI	GGTCTC	1 cut(s)	1154
BsaJI	CCNNGG	5 cut(s)	546, 630, 1251, 1291, 2233
Bsc4I	CCNNNNNNNGG	2 cut(s)	812, 848
Bse1I	ACTGG	5 cut(s)	295, 960, 1150, 1920, 2190
Bse3DI	GCAATG	1 cut(s)	1803
BseBI	CCWGG	4 cut(s)	297, 738, 813, 1293
BseDI	CCNNGG	5 cut(s)	546, 630, 1251, 1291, 2233
BseGI	GGATG	2 cut(s)	1549, 2002
BseLI	CCNNNNNNNGG	2 cut(s)	812, 848
BseMI	GCAATG	1 cut(s)	1803
BseMII	CTCAG	9 cut(s)	35, 66, 339, 651, 1133, 1229, 1513, 1967, 2224
BseNI	ACTGG	5 cut(s)	295, 960, 1150, 1920, 2190
BseRI	GAGGAG	2 cut(s)	313, 1142
BseSI	GKGCMC	1 cut(s)	1923
BseX3I	CGGCCG	1 cut(s)	2074
BseXI	GCAGC	4 cut(s)	477, 611, 1077, 1814
BseYI	CCCAGC	1 cut(s)	891
Bsh1236I	CGCG	1 cut(s)	560
Bsh1285I	CGRYCG	1 cut(s)	2077
BshFI	GGCC	3 cut(s)	120, 2023, 2076
BshNI	GGYRCC	2 cut(s)	268, 1918
BsiEI	CGRYCG	1 cut(s)	2077
BsiHKAI	GWGCWC	1 cut(s)	1531
BsiSI	CCGG	1 cut(s)	1923
BslI	CCNNNNNNNGG	2 cut(s)	812, 848
BsmAI	GTCTC	3 cut(s)	153, 1154, 1766
BsnI	GGCC	3 cut(s)	120, 2023, 2076
Bso31I	GGTCTC	1 cut(s)	1154
Bsp119I	TTCGAA	2 cut(s)	986, 1186
Bsp1286I	GDGCHC	2 cut(s)	1531, 1923
Bsp1407I	TGTACA	1 cut(s)	1962
Bsp19I	CCATGG	1 cut(s)	1251
BspACI	CCGC	5 cut(s)	436, 560, 1710, 2073, 2111
BspANI	GGCC	3 cut(s)	120, 2023, 2076
BspCNI	CTCAG	9 cut(s)	34, 67, 338, 652, 1132, 1230, 1512, 1968, 2223
BspFNI	CGCG	1 cut(s)	560
BspHI	TCATGA	1 cut(s)	1407
BspLI	GGNNCC	4 cut(s)	270, 552, 889, 1920
BspMAI	CTGCAG	2 cut(s)	601, 850
BspMI	ACCTGC	2 cut(s)	839, 2101
BspPI	GGATC	5 cut(s)	703, 1282, 1492, 1595, 2110
BspQI	GCTCTTC	1 cut(s)	962
BspT104I	TTCGAA	2 cut(s)	986, 1186
BspT107I	GGYRCC	2 cut(s)	268, 1918
BspTNI	GGTCTC	1 cut(s)	1154
BsrDI	GCAATG	1 cut(s)	1803
BsrGI	TGTACA	1 cut(s)	1962
BsrI	ACTGG	5 cut(s)	295, 960, 1150, 1920, 2190
BssECI	CCNNGG	5 cut(s)	546, 630, 1251, 1291, 2233
BssT1I	CCWWGG	3 cut(s)	546, 630, 1251
Bst2UI	CCWGG	4 cut(s)	297, 738, 813, 1293
Bst4CI	ACNGT	7 cut(s)	37, 70, 370, 1645, 1659, 1870, 2237
Bst6I	CTCTTC	2 cut(s)	229, 962
BstAPI	GCANNNNNTGC	1 cut(s)	433
BstAUI	TGTACA	1 cut(s)	1962
BstBAI	YACGTR	1 cut(s)	1462
BstBI	TTCGAA	2 cut(s)	986, 1186
BstC8I	GCNNGC	3 cut(s)	122, 176, 2013
BstDSI	CCRYGG	2 cut(s)	1251, 2233
BstENI	CCTNNNNNAGG	1 cut(s)	846
BstF5I	GGATG	2 cut(s)	1549, 2002
BstFNI	CGCG	1 cut(s)	560
BstMAI	GTCTC	3 cut(s)	153, 1154, 1766
BstMCI	CGRYCG	1 cut(s)	2077
BstMWI	GCNNNNNNNGC	5 cut(s)	433, 1716, 1725, 1802, 2093
BstNI	CCWGG	4 cut(s)	297, 738, 813, 1293
BstSCI	CCNGG	5 cut(s)	295, 736, 811, 1291, 1921
BstSFI	CTRYAG	5 cut(s)	246, 597, 786, 846, 1320
BstSLI	GKGCMC	1 cut(s)	1923
BstUI	CGCG	1 cut(s)	560
BstV1I	GCAGC	4 cut(s)	477, 611, 1077, 1814
BstV2I	GAAGAC	2 cut(s)	708, 932
BstX2I	RGATCY	4 cut(s)	200, 623, 695, 1287
BstYI	RGATCY	4 cut(s)	200, 623, 695, 1287
BstZI	CGGCCG	1 cut(s)	2074
BsuI	GTATCC	1 cut(s)	747
BsuRI	GGCC	3 cut(s)	120, 2023, 2076
BtgI	CCRYGG	2 cut(s)	1251, 2233
BtrI	CACGTC	1 cut(s)	859
BtsCI	GGATG	2 cut(s)	1549, 2002
BtsI	GCAGTG	1 cut(s)	369
BtsIMutI	CAGTG	5 cut(s)	33, 288, 369, 1875, 2197
BveI	ACCTGC	2 cut(s)	839, 2101
Cac8I	GCNNGC	3 cut(s)	122, 176, 2013
CaiI	CAGNNNCTG	4 cut(s)	74, 368, 596, 854
CciI	TCATGA	1 cut(s)	1407
Cfr13I	GGNCC	2 cut(s)	293, 887
CsiI	ACCWGGT	2 cut(s)	295, 736
Csp6I	GTAC	2 cut(s)	1296, 1963
CviAII	CATG	9 cut(s)	494, 518, 1247, 1252, 1408, 1532, 1618, 1667, 2156
CviQI	GTAC	2 cut(s)	1296, 1963
DraI	TTTAAA	1 cut(s)	1008
EaeI	YGGCCR	3 cut(s)	118, 2021, 2074
EagI	CGGCCG	1 cut(s)	2074
Eam1104I	CTCTTC	2 cut(s)	229, 962
EarI	CTCTTC	2 cut(s)	229, 962
EciI	GGCGGA	1 cut(s)	2100
EclXI	CGGCCG	1 cut(s)	2074
Eco130I	CCWWGG	3 cut(s)	546, 630, 1251
Eco31I	GGTCTC	1 cut(s)	1154
Eco47I	GGWCC	2 cut(s)	293, 887
Eco52I	CGGCCG	1 cut(s)	2074
Eco57I	CTGAAG	3 cut(s)	396, 1626, 1828
EcoNI	CCTNNNNNAGG	1 cut(s)	846
EcoRI	GAATTC	2 cut(s)	454, 2151
EcoRII	CCWGG	4 cut(s)	295, 736, 811, 1291
EcoT14I	CCWWGG	3 cut(s)	546, 630, 1251
EcoT22I	ATGCAT	1 cut(s)	781
ErhI	CCWWGG	3 cut(s)	546, 630, 1251
FaeI	CATG	9 cut(s)	497, 521, 1250, 1255, 1411, 1535, 1621, 1670, 2159
FalI	AAGNNNNNCTT	4 cut(s)	1262, 1294, 1683, 1715
FatI	CATG	9 cut(s)	493, 517, 1246, 1251, 1407, 1531, 1617, 1666, 2155
FbaI	TGATCA	2 cut(s)	832, 1650
Fnu4HI	GCNGC	5 cut(s)	491, 600, 1091, 1803, 2074
FokI	GGATG	2 cut(s)	1556, 2009
Fsp4HI	GCNGC	5 cut(s)	491, 600, 1091, 1803, 2074
FspBI	CTAG	5 cut(s)	750, 882, 1266, 1476, 1908
GluI	GCNGC	5 cut(s)	491, 600, 1091, 1803, 2074
GsaI	CCCAGC	1 cut(s)	895
HaeIII	GGCC	3 cut(s)	120, 2023, 2076
HapII	CCGG	1 cut(s)	1923
Hin1II	CATG	9 cut(s)	497, 521, 1250, 1255, 1411, 1535, 1621, 1670, 2159
HincII	GTYRAC	1 cut(s)	1662
HindII	GTYRAC	1 cut(s)	1662
HindIII	AAGCTT	1 cut(s)	2009
HinfI	GANTC	9 cut(s)	50, 107, 161, 563, 651, 662, 1100, 1316, 1630
HpaII	CCGG	1 cut(s)	1923
HphI	GGTGA	4 cut(s)	311, 752, 1610, 2249
Hpy166II	GTNNAC	5 cut(s)	101, 743, 887, 1662, 2195
Hpy188III	TCNNGA	8 cut(s)	40, 648, 655, 1408, 1501, 1604, 1823, 1908
Hpy8I	GTNNAC	5 cut(s)	101, 743, 887, 1662, 2195
HpyAV	CCTTC	7 cut(s)	19, 565, 756, 882, 1430, 1475, 2129
HpyCH4III	ACNGT	7 cut(s)	37, 70, 370, 1645, 1659, 1870, 2237
HpyCH4IV	ACGT	2 cut(s)	858, 1461
HpyF10VI	GCNNNNNNNGC	5 cut(s)	433, 1716, 1725, 1802, 2093
HpySE526I	ACGT	2 cut(s)	858, 1461
Hsp92II	CATG	9 cut(s)	497, 521, 1250, 1255, 1411, 1535, 1621, 1670, 2159
Ksp22I	TGATCA	2 cut(s)	832, 1650
LguI	GCTCTTC	1 cut(s)	962
LmnI	GCTCC	2 cut(s)	1957, 2101
Lsp1109I	GCAGC	4 cut(s)	477, 611, 1077, 1814
LweI	GCATC	6 cut(s)	482, 788, 1089, 1204, 1534, 1771
MabI	ACCWGGT	2 cut(s)	295, 736
MaeI	CTAG	5 cut(s)	750, 882, 1266, 1476, 1908
MaeII	ACGT	2 cut(s)	858, 1461
MaeIII	GTNAC	5 cut(s)	364, 586, 663, 732, 1457
MflI	RGATCY	4 cut(s)	200, 623, 695, 1287
MhlI	GDGCHC	2 cut(s)	1531, 1923
MlsI	TGGCCA	2 cut(s)	120, 2023
MluNI	TGGCCA	2 cut(s)	120, 2023
MlyI	GAGTC	4 cut(s)	101, 155, 660, 671
MmeI	TCCRAC	2 cut(s)	772, 1658
Mox20I	TGGCCA	2 cut(s)	120, 2023
Mph1103I	ATGCAT	1 cut(s)	781
MroXI	GAANNNNTTC	1 cut(s)	2151
MscI	TGGCCA	2 cut(s)	120, 2023
MslI	CAYNNNNRTG	4 cut(s)	507, 573, 1197, 1356
Msp20I	TGGCCA	2 cut(s)	120, 2023
MspA1I	CMGCKG	1 cut(s)	461
MspI	CCGG	1 cut(s)	1923
MspR9I	CCNGG	5 cut(s)	297, 738, 813, 1293, 1923
MvaI	CCWGG	4 cut(s)	297, 738, 813, 1293
MvnI	CGCG	1 cut(s)	560
MwoI	GCNNNNNNNGC	5 cut(s)	433, 1716, 1725, 1802, 2093
NciI	CCSGG	1 cut(s)	1923
NcoI	CCATGG	1 cut(s)	1251
NlaIII	CATG	9 cut(s)	497, 521, 1250, 1255, 1411, 1535, 1621, 1670, 2159
NlaIV	GGNNCC	4 cut(s)	270, 552, 889, 1920
NmuCI	GTSAC	2 cut(s)	364, 663
NsiI	ATGCAT	1 cut(s)	781
NspV	TTCGAA	2 cut(s)	986, 1186
OliI	CACNNNNGTG	1 cut(s)	1356
PagI	TCATGA	1 cut(s)	1407
PciSI	GCTCTTC	1 cut(s)	962
PdmI	GAANNNNTTC	1 cut(s)	2151
PfeI	GAWTC	5 cut(s)	50, 563, 1100, 1316, 1630
PflFI	GACNNNGTC	2 cut(s)	209, 661
PkrI	GCNGC	5 cut(s)	492, 601, 1092, 1804, 2075
PleI	GAGTC	4 cut(s)	101, 155, 659, 670
PpsI	GAGTC	4 cut(s)	101, 155, 659, 670
Ppu21I	YACGTR	1 cut(s)	1462
Psp6I	CCWGG	4 cut(s)	295, 736, 811, 1291
PspFI	CCCAGC	1 cut(s)	891
PspGI	CCWGG	4 cut(s)	295, 736, 811, 1291
PspN4I	GGNNCC	4 cut(s)	270, 552, 889, 1920
PspPI	GGNCC	2 cut(s)	293, 887
PstI	CTGCAG	2 cut(s)	601, 850
PstNI	CAGNNNCTG	4 cut(s)	74, 368, 596, 854
PsuI	RGATCY	4 cut(s)	200, 623, 695, 1287
PsyI	GACNNNGTC	2 cut(s)	209, 661
PvuII	CAGCTG	1 cut(s)	461
RsaI	GTAC	2 cut(s)	1297, 1964
RsaNI	GTAC	2 cut(s)	1296, 1963
RseI	CAYNNNNRTG	4 cut(s)	507, 573, 1197, 1356
SapI	GCTCTTC	1 cut(s)	962
SatI	GCNGC	5 cut(s)	491, 600, 1091, 1803, 2074
Sau96I	GGNCC	2 cut(s)	293, 887
SchI	GAGTC	4 cut(s)	101, 155, 660, 671
ScrFI	CCNGG	5 cut(s)	297, 738, 813, 1293, 1923
SduI	GDGCHC	2 cut(s)	1531, 1923
SexAI	ACCWGGT	2 cut(s)	295, 736
SfaNI	GCATC	6 cut(s)	482, 788, 1089, 1204, 1534, 1771
SfcI	CTRYAG	5 cut(s)	246, 597, 786, 846, 1320
SfuI	TTCGAA	2 cut(s)	986, 1186
SinI	GGWCC	2 cut(s)	293, 887
SmiMI	CAYNNNNRTG	4 cut(s)	507, 573, 1197, 1356
SmlI	CTYRAG	1 cut(s)	677
SmoI	CTYRAG	1 cut(s)	677
SpeI	ACTAGT	1 cut(s)	1265
SsiI	CCGC	5 cut(s)	436, 560, 1710, 2073, 2111
SspI	AATATT	4 cut(s)	184, 1888, 2029, 2218
SspMI	CTAG	5 cut(s)	750, 882, 1266, 1476, 1908
StyD4I	CCNGG	5 cut(s)	295, 736, 811, 1291, 1921
StyI	CCWWGG	3 cut(s)	546, 630, 1251
TaaI	ACNGT	7 cut(s)	37, 70, 370, 1645, 1659, 1870, 2237
TaiI	ACGT	2 cut(s)	861, 1464
TaqI	TCGA	4 cut(s)	39, 705, 986, 1186
TatI	WGTACW	1 cut(s)	1962
TauI	GCSGC	1 cut(s)	2076
TfiI	GAWTC	5 cut(s)	50, 563, 1100, 1316, 1630
TscAI	CASTG	5 cut(s)	40, 295, 369, 1875, 2197
TseFI	GTSAC	2 cut(s)	364, 663
TseI	GCWGC	4 cut(s)	490, 599, 1090, 1802
Tsp45I	GTSAC	2 cut(s)	364, 663
TspRI	CASTG	5 cut(s)	40, 295, 369, 1875, 2197
Tth111I	GACNNNGTC	2 cut(s)	209, 661
VpaK11BI	GGWCC	2 cut(s)	293, 887
XagI	CCTNNNNNAGG	1 cut(s)	846
XapI	RAATTY	4 cut(s)	454, 1575, 1766, 2151
XbaI	TCTAGA	1 cut(s)	1907
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1732
XmnI	GAANNNNTTC	1 cut(s)	2151
XspI	CTAG	5 cut(s)	750, 882, 1266, 1476, 1908
Zsp2I	ATGCAT	1 cut(s)	781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.