Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002760

Physical Location & Seq

Genomic Coordinates Reverse (-)

18025247 .. 18031255

Gene Structure 6009 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G43410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGGCGTTATCTATGAAGCCATTCAGAGCCGATGATTCCGGTTTCCAGTCAAACAATCTTTGGGTCGGTAGCCTAACGCCGGAGACGACAGAGTCAGATCTGACCGAGTTGTTTGGAAGATACGGCGATATTGATAGAATCACGGTGTATTCTTCACGAGGCTTTGCGTTTATATACTACAGACATGTGGAGGAAGCAGTCGCAGCCAAAGAGGCTCTTCAAGGAGCAAATTTGAATGGAAGTCAAATTAAGATCGAATACGCACGACCGGCAAAACCTTGTAAGAGTCTATGGGTGGGTGGAATCGGCCCTAATGTCTCCAAGGATGACCTGGAGGAAGAGTTCAGCAAGTTTGGGAAAATCGAGGATTTTAGGTTTCTCAGAGAACGCAAGACAGCTTTCATTGATTATTATGAGATGGATGATGCTTTACAGGCTAAGAGCATGAATGGAAAGCCTATGGGTGGTAGCTTTTTGCGTGTTGATTTTCTCCGGTCACAAGCGCCAAAAAAAGAACAATGGGCTGGCTCTTACGATAACAGAAATGGCAATATGAATCATAAACCGCAGTATCCTCACTCATATGAAGACTTTAAAGGAGATGTCCAGCCAAGTAAGGTTCTGTGGATTGGGTTCCCTCCTACTGCTACACAATGCAATGATGAGCAAATTCTGCACAATGCGATGATACTCTTTGGTGAGATCGAGAGGGTAAAAAGTTACCCATCAAGGAATTTTGCACTTGTGGAGTTTAGGAGCGCGGAGGAAGCTCGCCAATGCAAGGAAGGCCTACAGGGGAGGTTATTCAATAATCCTAGAATCAAAATTATGTACTCAAACGATGAGTTGCCTCCTGAGCAAGACGATACTAGTTTTTACTCTGAATACAATGACGTTGTTGGTAAGGAGCCAAACTGGAGGAGGCCATCTGCAAATGGAACTGGAATACTCCCATCTCCAACAGGACCTGGAATCCTCCCATCTCCTGCACAAGGTACGAGGCGCCCTATGAGGTCAAACCCCGATTCTTGGGAAGGATATGATCCTGCTCAGTTGGTCAGAGAAAGTAAACGAACCAGAAGAGATGGATCAGTGGACGGTTTTACTCCAATGGGTGTCGATGAGAGGTCATTTGGTCGAGGTTCAGTTGCTGCTAGACCTATCCGTGGCCCCCCTGATTCTGATCACATATGGAGAGGAATGATTGCCAAGGGTGGAACTCCCGTCTGTTGTGCTCGTTGTGTACCTATGGGAAAGGGGATTGAAACTAAACTGCCTGAGGTCGTCAATTGTTCAGCAAGAACTGATTTGAATATGCTCGCTAAACATTACGCCGTTGCCATTGGATGTGAGATCGTTTTTTTCGTACCAGACAGGGAAGAAGATTTTGCGTCTTACACTGAATTTCTCCGGTACCTTAGCTCAAAAGATCGGGCGGGTGTTGCCAAATTAGATGATGGTACAACTTTATTCTTGGTGCCTCCATCAGATTTCTTAACTGATGTACTCCAAGTGACCCGTCAAGAACGGCTATATGGTGTTGTTCTCAAGTTACCCCCGCCAGCCGTTCCTGTTACAGCATCATACAGACAAGAATCTCAGTCCAATCCTCTGCATTATATGGATCAAGCCCGGGATTCACCTGCCAATGCTAGTCACAGTTTATATCCTCCTAGGGAAAATTACATTAGGGGTGCACCAGAACATTTGACAGCTGCTTCAAAACCATCTGTTAGCGAGCCTCTCAGAATACCTAATAATGCAGCGCCTCAAGCTGGGGTTAGTTTAACTCCGGAGCTTTTAGCCACTCTGGCATCTATTCTCCCTGCAACTTCTCAACCTGCTGCCCCTGAGAGTCACCAACCTATGTCAGGACCTTCAACAGTTGTTTCCACAGCACATCAGTCCAATGGACTGTACAATGGAGAAGCACCGTCTCAAGCTTGGAAAAGAGGTCCACAAACAGTTCATGATGCGTCAAATCAGTCATTCCAACAATACGGAAATCAGTACACTCCAGCTGGGCAACTACCTCCTCCTCCTTCGCGTTACCCTCCAGCTTCAAACAACCCCAACTACACTAGTGGAATGGTCCATGGCAACATGCAATACCAGAGCCAATCTGTTAACATGCCTCAGCTGTCTCCGTTACCAAATATGCCTCATAATAATTATTCCATGTACACTCAGGGTTCGTCAAATCATCCTGTTTCTCAGCCCATGGTCCAGCAATACCAACCAGAAGCGTCCATGCCAAACCAAAACTATGGTCCAATTCCAAGTTATCAGCAAGCTAATTTTCATGGCGTAACAACAAATCAGGCACAGAACTTAAACCCTTCCCAATTTCAAGCTGCCATGCAACCACCAGCAGATAAGGCAAATTTAGAGCCACAAAACCAAGCACTACGATTGCAGCCTATGATCTCTGGGGATGGTCAGGGTACAACAGATGGGGAGGTCGATAAGAATCAGAGATACCAGTCAACACTACAATTTGCAGCAAACCTTCTTCTCCAGATACAGCAGAAACAGCAGCAACAGTCTTCAGGTACTCCGGCTGGACAGGGGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0000785 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006325 GO:0006342 GO:0006355 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009553 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0016458 GO:0019219 GO:0019222 GO:0022414 GO:0031047 GO:0031048 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0034641 GO:0040029 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048229 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 SPOC

Protein Analysis

858

Amino Acids

94.9

Weight (kDa)

6.2

Isoelectric Point (pI)

54.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	20 - 84	2.3e-15	RNA recognition motif
RRM_1	PF00076	97 - 159	2.7e-11	RNA recognition motif
RRM_1	PF00076	225 - 274	7.9e-06	RNA recognition motif
SPOC	PF07744	391 - 517	2.3e-27	SPOC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002760)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43410 AT2G43410 AT2G43410 AT2G43410 AT2G43410 AT2G43410
fragaria_vesca	FvH4_7g04880 FvH4_7g04880 FvH4_7g04880
malus_domestica	MD04G1045000.v1.1 MD13G1271200.v1.1
prunus_persica	Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1
pyrus_communis	pycom04g03870 pycom13g27540
rosa_chinensis	RchiOBHm_Chr1g0330861
rosa_laevigata	RLG00000029768 RLG00000029781
rosa_multiflora	Rmu_sc0000236.1_g000011 Rmu_sc0000236.1_g000038 Rmu_sc0002899.1_g000006 Rmu_sc0005689.1_g000004 Rmu_sc0005689.1_g000022
rosa_roxburghii	Rroxscaffold_4G00319690 Rroxscaffold_4G00326970 Rroxscaffold_5G00351180
rosa_rugosa	Rorug01G0090800.1 Rorug01G0090900
rosa_samantha	Rh1AG112500 Rh1BG086500 Rh1CG109500 Rh1CG109600 Rh1DG117900
rosa_wichuraiana	Rw1G009100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1651
AasI	GACNNNNNNGTC	1 cut(s)	91
Acc36I	ACCTGC	2 cut(s)	1651, 1849
Acc65I	GGTACC	1 cut(s)	1413
AccB1I	GGYRCC	3 cut(s)	1002, 1413, 1477
AccII	CGCG	2 cut(s)	761, 2047
AccIII	TCCGGA	1 cut(s)	1792
AciI	CCGC	4 cut(s)	566, 761, 1436, 1559
AclWI	GGATC	3 cut(s)	1037, 1096, 1632
AcsI	RAATTY	5 cut(s)	229, 669, 733, 1403, 2383
AcuI	CTGAAG	1 cut(s)	2532
AcyI	GRCGYC	1 cut(s)	1003
AfiI	CCNNNNNNNGG	8 cut(s)	79, 464, 781, 992, 1029, 1166, 1775, 1871
AflIII	ACRYGT	1 cut(s)	184
AgsI	TTSAA	9 cut(s)	221, 235, 808, 1265, 1312, 1722, 1881, 2064, 2351
AhlI	ACTAGT	2 cut(s)	869, 2081
AjnI	CCWGG	2 cut(s)	330, 967
AloI	GAACNNNNNNTCC	2 cut(s)	326, 358
Alw21I	GWGCWC	2 cut(s)	1237, 1699
Alw26I	GTCTC	4 cut(s)	77, 322, 1941, 2148
Alw44I	GTGCAC	1 cut(s)	1695
AlwI	GGATC	3 cut(s)	1037, 1096, 1632
AlwNI	CAGNNNCTG	2 cut(s)	968, 1151
Ama87I	CYCGRG	1 cut(s)	1632
Aor13HI	TCCGGA	1 cut(s)	1792
AoxI	GGCC	5 cut(s)	307, 787, 923, 1168, 2570
ApaLI	GTGCAC	1 cut(s)	1695
ApeKI	GCWGC	9 cut(s)	203, 1151, 1715, 1763, 1844, 2354, 2416, 2501, 2536
ApoI	RAATTY	5 cut(s)	229, 669, 733, 1403, 2383
ArsI	GACNNNNNNTTYG	2 cut(s)	2254, 2286
Asp700I	GAANNNNTTC	1 cut(s)	20
Asp718I	GGTACC	1 cut(s)	1413
AspA2I	CCTAGG	1 cut(s)	1673
AspLEI	GCGC	4 cut(s)	505, 761, 1005, 1768
AspS9I	GGNCC	9 cut(s)	308, 965, 1169, 1874, 1955, 2092, 2224, 2270, 2570
AsuC2I	CCSGG	2 cut(s)	1633, 1634
AsuHPI	GGTGA	3 cut(s)	710, 1632, 1850
AvaI	CYCGRG	1 cut(s)	1632
AvaII	GGWCC	6 cut(s)	965, 1874, 1955, 2092, 2224, 2270
AvrII	CCTAGG	1 cut(s)	1673
AxyI	CCTNAGG	1 cut(s)	1278
BaeGI	GKGCMC	1 cut(s)	1699
BaeI	ACNNNNGTAYC	2 cut(s)	554, 587
BanI	GGYRCC	3 cut(s)	1002, 1413, 1477
BauI	CACGAG	1 cut(s)	156
BbsI	GAAGAC	2 cut(s)	594, 2538
Bbv12I	GWGCWC	2 cut(s)	1237, 1699
BbvCI	CCTCAGC	1 cut(s)	2136
BbvI	GCAGC	9 cut(s)	215, 1138, 1702, 1775, 1831, 2341, 2428, 2513, 2548
BceAI	ACGGC	4 cut(s)	139, 1319, 1544, 1550
BciT130I	CCWGG	2 cut(s)	332, 969
BciVI	GTATCC	1 cut(s)	582
BclI	TGATCA	1 cut(s)	1183
BcnI	CCSGG	2 cut(s)	1633, 1634
BcoDI	GTCTC	4 cut(s)	77, 322, 1941, 2148
BcuI	ACTAGT	2 cut(s)	869, 2081
BfaI	CTAG	6 cut(s)	816, 870, 1155, 1653, 1674, 2082
BfmI	CTRYAG	2 cut(s)	178, 791
BfoI	RGCGCY	3 cut(s)	506, 1006, 1769
BfuAI	ACCTGC	2 cut(s)	1651, 1849
BfuI	GTATCC	1 cut(s)	582
BglI	GCCNNNNNGGC	2 cut(s)	212, 1811
BglII	AGATCT	1 cut(s)	97
BisI	GCNGC	9 cut(s)	204, 1152, 1716, 1764, 1845, 2355, 2417, 2502, 2537
BlnI	CCTAGG	1 cut(s)	1673
BlsI	GCNGC	9 cut(s)	205, 1153, 1717, 1765, 1846, 2356, 2418, 2503, 2538
Bme1390I	CCNGG	4 cut(s)	332, 969, 1633, 1634
Bme18I	GGWCC	6 cut(s)	965, 1874, 1955, 2092, 2224, 2270
BmeT110I	CYCGRG	1 cut(s)	1632
BmgT120I	GGNCC	9 cut(s)	308, 965, 1169, 1874, 1955, 2092, 2224, 2270, 2570
BmiI	GGNNCC	7 cut(s)	635, 909, 1004, 1171, 1415, 1479, 2571
BmrFI	CCNGG	4 cut(s)	332, 969, 1633, 1634
BmsI	GCATC	4 cut(s)	415, 1589, 1823, 1963
BpiI	GAAGAC	2 cut(s)	594, 2538
BpmI	CTGGAG	5 cut(s)	353, 937, 2001, 2040, 2501
Bpu10I	CCTNAGC	3 cut(s)	855, 1418, 2136
BpuEI	CTTGAG	3 cut(s)	1532, 1755, 1923
BpuMI	CCSGG	2 cut(s)	1633, 1634
BsaBI	GATNNNNATC	2 cut(s)	1182, 2469
BsaHI	GRCGYC	1 cut(s)	1003
BsaJI	CCNNGG	7 cut(s)	321, 1165, 1209, 1632, 1673, 2095, 2220
BsaWI	WCCGGW	4 cut(s)	38, 492, 1410, 1792
BsaXI	ACNNNNNCTCC	2 cut(s)	326, 356
Bsc4I	CCNNNNNNNGG	8 cut(s)	79, 464, 781, 992, 1029, 1166, 1775, 1871
Bse118I	RCCGGY	1 cut(s)	268
Bse1I	ACTGG	4 cut(s)	46, 920, 946, 2482
Bse21I	CCTNAGG	1 cut(s)	1278
Bse3DI	GCAATG	1 cut(s)	664
Bse8I	GATNNNNATC	2 cut(s)	1182, 2469
BseAI	TCCGGA	1 cut(s)	1792
BseBI	CCWGG	2 cut(s)	332, 969
BseDI	CCNNGG	7 cut(s)	321, 1165, 1209, 1632, 1673, 2095, 2220
BseGI	GGATG	5 cut(s)	331, 427, 1352, 2203, 2440
BseJI	GATNNNNATC	2 cut(s)	1182, 2469
BseLI	CCNNNNNNNGG	8 cut(s)	79, 464, 781, 992, 1029, 1166, 1775, 1871
BseMI	GCAATG	1 cut(s)	664
BseNI	ACTGG	4 cut(s)	46, 920, 946, 2482
BseRI	GAGGAG	3 cut(s)	934, 2025, 2028
BseSI	GKGCMC	1 cut(s)	1699
BseXI	GCAGC	9 cut(s)	215, 1138, 1702, 1775, 1831, 2341, 2428, 2513, 2548
BseYI	CCCAGC	2 cut(s)	1775, 2021
BsgI	GTGCAG	2 cut(s)	659, 972
Bsh1236I	CGCG	2 cut(s)	761, 2047
Bsh1285I	CGRYCG	1 cut(s)	269
BshFI	GGCC	5 cut(s)	309, 789, 925, 1170, 2572
BshNI	GGYRCC	3 cut(s)	1002, 1413, 1477
BsiEI	CGRYCG	1 cut(s)	269
BsiHKAI	GWGCWC	2 cut(s)	1237, 1699
BsiHKCI	CYCGRG	1 cut(s)	1632
BsiSI	CCGG	8 cut(s)	39, 80, 269, 493, 1411, 1633, 1793, 2558
BslI	CCNNNNNNNGG	8 cut(s)	79, 464, 781, 992, 1029, 1166, 1775, 1871
BsmAI	GTCTC	4 cut(s)	77, 322, 1941, 2148
BsmBI	CGTCTC	2 cut(s)	77, 1941
BsnI	GGCC	5 cut(s)	309, 789, 925, 1170, 2572
BsoBI	CYCGRG	1 cut(s)	1632
Bsp1286I	GDGCHC	2 cut(s)	1237, 1699
Bsp13I	TCCGGA	1 cut(s)	1792
Bsp1407I	TGTACA	2 cut(s)	1917, 2181
Bsp19I	CCATGG	2 cut(s)	2095, 2220
BspACI	CCGC	4 cut(s)	566, 761, 1436, 1559
BspANI	GGCC	5 cut(s)	309, 789, 925, 1170, 2572
BspEI	TCCGGA	1 cut(s)	1792
BspFNI	CGCG	2 cut(s)	761, 2047
BspHI	TCATGA	1 cut(s)	1969
BspLI	GGNNCC	7 cut(s)	635, 909, 1004, 1171, 1415, 1479, 2571
BspMI	ACCTGC	2 cut(s)	1651, 1849
BspPI	GGATC	3 cut(s)	1037, 1096, 1632
BspQI	GCTCTTC	1 cut(s)	222
BspT107I	GGYRCC	3 cut(s)	1002, 1413, 1477
BsrDI	GCAATG	1 cut(s)	664
BsrFI	RCCGGY	1 cut(s)	268
BsrGI	TGTACA	2 cut(s)	1917, 2181
BsrI	ACTGG	4 cut(s)	46, 920, 946, 2482
BssAI	RCCGGY	1 cut(s)	268
BssECI	CCNNGG	7 cut(s)	321, 1165, 1209, 1632, 1673, 2095, 2220
BssNI	GRCGYC	1 cut(s)	1003
BssSI	CACGAG	1 cut(s)	156
BssT1I	CCWWGG	5 cut(s)	321, 1209, 1673, 2095, 2220
Bst2BI	CACGAG	1 cut(s)	156
Bst2UI	CCWGG	2 cut(s)	332, 969
Bst4CI	ACNGT	8 cut(s)	145, 1100, 1661, 1885, 1917, 1935, 1966, 2544
Bst6I	CTCTTC	3 cut(s)	222, 333, 1075
BstACI	GRCGYC	1 cut(s)	1003
BstAPI	GCANNNNNTGC	1 cut(s)	673
BstAUI	TGTACA	2 cut(s)	1917, 2181
BstC8I	GCNNGC	6 cut(s)	526, 772, 1320, 1563, 1739, 2292
BstDSI	CCRYGG	3 cut(s)	1165, 2095, 2220
BstENI	CCTNNNNNAGG	2 cut(s)	990, 1869
BstF5I	GGATG	5 cut(s)	331, 427, 1352, 2203, 2440
BstFNI	CGCG	2 cut(s)	761, 2047
BstH2I	RGCGCY	3 cut(s)	506, 1006, 1769
BstHHI	GCGC	4 cut(s)	505, 761, 1005, 1768
BstMAI	GTCTC	4 cut(s)	77, 322, 1941, 2148
BstMCI	CGRYCG	1 cut(s)	269
BstNI	CCWGG	2 cut(s)	332, 969
BstNSI	RCATGY	3 cut(s)	188, 2107, 2134
BstSCI	CCNGG	4 cut(s)	330, 967, 1631, 1632
BstSFI	CTRYAG	2 cut(s)	178, 791
BstSLI	GKGCMC	1 cut(s)	1699
BstUI	CGCG	2 cut(s)	761, 2047
BstV1I	GCAGC	9 cut(s)	215, 1138, 1702, 1775, 1831, 2341, 2428, 2513, 2548
BstV2I	GAAGAC	2 cut(s)	594, 2538
BstX2I	RGATCY	1 cut(s)	97
BstXI	CCANNNNNNTGG	1 cut(s)	2267
BstYI	RGATCY	1 cut(s)	97
Bsu36I	CCTNAGG	1 cut(s)	1278
BsuI	GTATCC	1 cut(s)	582
BsuRI	GGCC	5 cut(s)	309, 789, 925, 1170, 2572
BtgI	CCRYGG	3 cut(s)	1165, 2095, 2220
BtgZI	GCGATG	1 cut(s)	698
BtsCI	GGATG	5 cut(s)	331, 427, 1352, 2203, 2440
BtsIMutI	CAGTG	2 cut(s)	1098, 1398
BveI	ACCTGC	2 cut(s)	1651, 1849
Cac8I	GCNNGC	6 cut(s)	526, 772, 1320, 1563, 1739, 2292
CaiI	CAGNNNCTG	2 cut(s)	968, 1151
CciI	TCATGA	1 cut(s)	1969
CfoI	GCGC	4 cut(s)	505, 761, 1005, 1768
Cfr10I	RCCGGY	1 cut(s)	268
Cfr13I	GGNCC	9 cut(s)	308, 965, 1169, 1874, 1955, 2092, 2224, 2270, 2570
Cfr9I	CCCGGG	1 cut(s)	1632
CseI	GACGC	3 cut(s)	1380, 1965, 2235
DinI	GGCGCC	1 cut(s)	1004
DraI	TTTAAA	1 cut(s)	595
DrdI	GACNNNNNNGTC	1 cut(s)	91
DseDI	GACNNNNNNGTC	1 cut(s)	91
Eam1104I	CTCTTC	3 cut(s)	222, 333, 1075
EarI	CTCTTC	3 cut(s)	222, 333, 1075
Eco130I	CCWWGG	5 cut(s)	321, 1209, 1673, 2095, 2220
Eco147I	AGGCCT	1 cut(s)	789
Eco47I	GGWCC	6 cut(s)	965, 1874, 1955, 2092, 2224, 2270
Eco57I	CTGAAG	1 cut(s)	2532
Eco81I	CCTNAGG	1 cut(s)	1278
Eco88I	CYCGRG	1 cut(s)	1632
EcoNI	CCTNNNNNAGG	2 cut(s)	990, 1869
EcoO109I	RGGNCCY	3 cut(s)	965, 1874, 2570
EcoRII	CCWGG	2 cut(s)	330, 967
EcoT14I	CCWWGG	5 cut(s)	321, 1209, 1673, 2095, 2220
EgeI	GGCGCC	1 cut(s)	1004
EheI	GGCGCC	1 cut(s)	1004
ErhI	CCWWGG	5 cut(s)	321, 1209, 1673, 2095, 2220
Esp3I	CGTCTC	2 cut(s)	77, 1941
FalI	AAGNNNNNCTT	2 cut(s)	201, 233
FauI	CCCGC	2 cut(s)	1429, 1566
FauNDI	CATATG	2 cut(s)	583, 1190
FbaI	TGATCA	1 cut(s)	1183
Fnu4HI	GCNGC	9 cut(s)	204, 1152, 1716, 1764, 1845, 2355, 2417, 2502, 2537
FokI	GGATG	5 cut(s)	338, 434, 1359, 2190, 2447
Fsp4HI	GCNGC	9 cut(s)	204, 1152, 1716, 1764, 1845, 2355, 2417, 2502, 2537
FspBI	CTAG	6 cut(s)	816, 870, 1155, 1653, 1674, 2082
GlaI	GCGC	4 cut(s)	504, 760, 1004, 1767
GluI	GCNGC	9 cut(s)	204, 1152, 1716, 1764, 1845, 2355, 2417, 2502, 2537
GsaI	CCCAGC	2 cut(s)	1779, 2025
GsuI	CTGGAG	5 cut(s)	353, 937, 2001, 2040, 2501
HaeII	RGCGCY	3 cut(s)	506, 1006, 1769
HaeIII	GGCC	5 cut(s)	309, 789, 925, 1170, 2572
HapII	CCGG	8 cut(s)	39, 80, 269, 493, 1411, 1633, 1793, 2558
HgaI	GACGC	3 cut(s)	1380, 1965, 2235
HhaI	GCGC	4 cut(s)	505, 761, 1005, 1768
Hin1I	GRCGYC	1 cut(s)	1003
Hin6I	GCGC	4 cut(s)	503, 759, 1003, 1766
HinP1I	GCGC	4 cut(s)	503, 759, 1003, 1766
HincII	GTYRAC	2 cut(s)	2128, 2487
HindII	GTYRAC	2 cut(s)	2128, 2487
HindIII	AAGCTT	1 cut(s)	1941
HpaI	GTTAAC	1 cut(s)	2128
HpaII	CCGG	8 cut(s)	39, 80, 269, 493, 1411, 1633, 1793, 2558
HphI	GGTGA	3 cut(s)	710, 1632, 1850
Hpy166II	GTNNAC	9 cut(s)	1070, 1096, 1244, 1697, 1958, 2013, 2128, 2184, 2487
Hpy188III	TCNNGA	8 cut(s)	156, 706, 854, 1523, 1793, 1872, 1970, 2518
Hpy8I	GTNNAC	9 cut(s)	1070, 1096, 1244, 1697, 1958, 2013, 2128, 2184, 2487
HpyAV	CCTTC	6 cut(s)	779, 1028, 1887, 2052, 2349, 2519
HpyCH4III	ACNGT	8 cut(s)	145, 1100, 1661, 1885, 1917, 1935, 1966, 2544
HpyCH4IV	ACGT	1 cut(s)	894
HpySE526I	ACGT	1 cut(s)	894
Hsp92I	GRCGYC	1 cut(s)	1003
HspAI	GCGC	4 cut(s)	503, 759, 1003, 1766
KasI	GGCGCC	1 cut(s)	1002
Kpn2I	TCCGGA	1 cut(s)	1792
KpnI	GGTACC	1 cut(s)	1417
Ksp22I	TGATCA	1 cut(s)	1183
KspAI	GTTAAC	1 cut(s)	2128
LguI	GCTCTTC	1 cut(s)	222
LmnI	GCTCC	4 cut(s)	224, 756, 907, 1795
Lsp1109I	GCAGC	9 cut(s)	215, 1138, 1702, 1775, 1831, 2341, 2428, 2513, 2548
LweI	GCATC	4 cut(s)	415, 1589, 1823, 1963
MaeI	CTAG	6 cut(s)	816, 870, 1155, 1653, 1674, 2082
MaeII	ACGT	1 cut(s)	894
MfeI	CAATTG	1 cut(s)	1288
MflI	RGATCY	1 cut(s)	97
MhlI	GDGCHC	2 cut(s)	1237, 1699
Mly113I	GGCGCC	1 cut(s)	1003
MlyI	GAGTC	3 cut(s)	101, 295, 1864
MmeI	TCCRAC	2 cut(s)	983, 2017
MroI	TCCGGA	1 cut(s)	1792
MroXI	GAANNNNTTC	1 cut(s)	20
MseI	TTAA	6 cut(s)	249, 594, 1496, 1787, 2127, 2333
MslI	CAYNNNNRTG	1 cut(s)	582
MspA1I	CMGCKG	3 cut(s)	1715, 2021, 2140
MspI	CCGG	8 cut(s)	39, 80, 269, 493, 1411, 1633, 1793, 2558
MspR9I	CCNGG	4 cut(s)	332, 969, 1633, 1634
MunI	CAATTG	1 cut(s)	1288
MvaI	CCWGG	2 cut(s)	332, 969
MvnI	CGCG	2 cut(s)	761, 2047
NarI	GGCGCC	1 cut(s)	1003
NciI	CCSGG	2 cut(s)	1633, 1634
NcoI	CCATGG	2 cut(s)	2095, 2220
NdeI	CATATG	2 cut(s)	583, 1190
NlaIV	GGNNCC	7 cut(s)	635, 909, 1004, 1171, 1415, 1479, 2571
NmuCI	GTSAC	4 cut(s)	495, 1513, 1655, 1856
NspI	RCATGY	3 cut(s)	188, 2107, 2134
PagI	TCATGA	1 cut(s)	1969
PaqCI	CACCTGC	1 cut(s)	1651
PceI	AGGCCT	1 cut(s)	789
PciI	ACATGT	1 cut(s)	184
PciSI	GCTCTTC	1 cut(s)	222
PcsI	WCGNNNNNNNCGW	2 cut(s)	83, 1362
PdmI	GAANNNNTTC	1 cut(s)	20
PflFI	GACNNNGTC	1 cut(s)	91
PkrI	GCNGC	9 cut(s)	205, 1153, 1717, 1765, 1846, 2356, 2418, 2503, 2538
PleI	GAGTC	3 cut(s)	100, 294, 1863
PluTI	GGCGCC	1 cut(s)	1006
PpsI	GAGTC	3 cut(s)	100, 294, 1863
PpuMI	RGGWCCY	2 cut(s)	965, 1874
PscI	ACATGT	1 cut(s)	184
Psp5II	RGGWCCY	2 cut(s)	965, 1874
Psp6I	CCWGG	2 cut(s)	330, 967
PspFI	CCCAGC	2 cut(s)	1775, 2021
PspGI	CCWGG	2 cut(s)	330, 967
PspN4I	GGNNCC	7 cut(s)	635, 909, 1004, 1171, 1415, 1479, 2571
PspPI	GGNCC	9 cut(s)	308, 965, 1169, 1874, 1955, 2092, 2224, 2270, 2570
PspPPI	RGGWCCY	2 cut(s)	965, 1874
PstNI	CAGNNNCTG	2 cut(s)	968, 1151
PsuI	RGATCY	1 cut(s)	97
PsyI	GACNNNGTC	1 cut(s)	91
PvuII	CAGCTG	3 cut(s)	1715, 2021, 2140
RseI	CAYNNNNRTG	1 cut(s)	582
SapI	GCTCTTC	1 cut(s)	222
SaqAI	TTAA	6 cut(s)	249, 594, 1496, 1787, 2127, 2333
SatI	GCNGC	9 cut(s)	204, 1152, 1716, 1764, 1845, 2355, 2417, 2502, 2537
Sau96I	GGNCC	9 cut(s)	308, 965, 1169, 1874, 1955, 2092, 2224, 2270, 2570
SchI	GAGTC	3 cut(s)	101, 295, 1864
ScrFI	CCNGG	4 cut(s)	332, 969, 1633, 1634
SduI	GDGCHC	2 cut(s)	1237, 1699
SfaNI	GCATC	4 cut(s)	415, 1589, 1823, 1963
SfcI	CTRYAG	2 cut(s)	178, 791
SfoI	GGCGCC	1 cut(s)	1004
SinI	GGWCC	6 cut(s)	965, 1874, 1955, 2092, 2224, 2270
SmaI	CCCGGG	1 cut(s)	1634
SmiMI	CAYNNNNRTG	1 cut(s)	582
SmlI	CTYRAG	3 cut(s)	1547, 1770, 1938
SmoI	CTYRAG	3 cut(s)	1547, 1770, 1938
SpeI	ACTAGT	2 cut(s)	869, 2081
SseBI	AGGCCT	1 cut(s)	789
SsiI	CCGC	4 cut(s)	566, 761, 1436, 1559
SspDI	GGCGCC	1 cut(s)	1002
SspMI	CTAG	6 cut(s)	816, 870, 1155, 1653, 1674, 2082
StuI	AGGCCT	1 cut(s)	789
StyD4I	CCNGG	4 cut(s)	330, 967, 1631, 1632
StyI	CCWWGG	5 cut(s)	321, 1209, 1673, 2095, 2220
TaaI	ACNGT	8 cut(s)	145, 1100, 1661, 1885, 1917, 1935, 1966, 2544
TaiI	ACGT	1 cut(s)	897
TaqI	TCGA	6 cut(s)	255, 363, 705, 1119, 1138, 2463
TaqII	GACCGA	1 cut(s)	119
TatI	WGTACW	5 cut(s)	831, 1504, 1917, 2010, 2181
Tru1I	TTAA	6 cut(s)	249, 594, 1496, 1787, 2127, 2333
Tru9I	TTAA	6 cut(s)	249, 594, 1496, 1787, 2127, 2333
TscAI	CASTG	2 cut(s)	1098, 1405
TseFI	GTSAC	4 cut(s)	495, 1513, 1655, 1856
TseI	GCWGC	9 cut(s)	203, 1151, 1715, 1763, 1844, 2354, 2416, 2501, 2536
Tsp45I	GTSAC	4 cut(s)	495, 1513, 1655, 1856
TspDTI	ATGAA	7 cut(s)	29, 391, 461, 569, 600, 1958, 2291
TspGWI	ACGGA	3 cut(s)	1154, 2016, 2136
TspMI	CCCGGG	1 cut(s)	1632
TspRI	CASTG	2 cut(s)	1098, 1405
Tth111I	GACNNNGTC	1 cut(s)	91
VneI	GTGCAC	1 cut(s)	1695
VpaK11BI	GGWCC	6 cut(s)	965, 1874, 1955, 2092, 2224, 2270
XagI	CCTNNNNNAGG	2 cut(s)	990, 1869
XapI	RAATTY	5 cut(s)	229, 669, 733, 1403, 2383
XceI	RCATGY	3 cut(s)	188, 2107, 2134
XcmI	CCANNNNNNNNNTGG	1 cut(s)	328
XmaI	CCCGGG	1 cut(s)	1632
XmaJI	CCTAGG	1 cut(s)	1673
XmnI	GAANNNNTTC	1 cut(s)	20
XspI	CTAG	6 cut(s)	816, 870, 1155, 1653, 1674, 2082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.