Flowering time control protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43410 AT2G43410 AT2G43410 AT2G43410 AT2G43410 AT2G43410 |
| fragaria_vesca | FvH4_7g04880 FvH4_7g04880 FvH4_7g04880 |
| malus_domestica | MD04G1045000.v1.1 MD13G1271200.v1.1 |
| prunus_persica | Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 Prupe.1G197900_v2.0.a1 |
| pyrus_communis | pycom04g03870 pycom13g27540 |
| rosa_chinensis | RchiOBHm_Chr1g0330861 |
| rosa_laevigata | RLG00000029768 RLG00000029781 |
| rosa_multiflora | Rmu_sc0000236.1_g000011 Rmu_sc0000236.1_g000038 Rmu_sc0002899.1_g000006 Rmu_sc0005689.1_g000004 Rmu_sc0005689.1_g000022 |
| rosa_roxburghii | Rroxscaffold_4G00319690 Rroxscaffold_4G00326970 Rroxscaffold_5G00351180 |
| rosa_rugosa | Rorug01G0090800.1 Rorug01G0090900 |
| rosa_samantha | Rh1AG112500 Rh1BG086500 Rh1CG109500 Rh1CG109600 Rh1DG117900 |
| rosa_wichuraiana | Rw1G009100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1689 |
| AatII | GACGTC | 2 cut(s) | 99, 158 |
| Acc65I | GGTACC | 2 cut(s) | 684, 1459 |
| AccB1I | GGYRCC | 5 cut(s) | 4, 684, 1459, 1570, 2206 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 902 |
| AclWI | GGATC | 3 cut(s) | 851, 2229, 2242 |
| AcoI | YGGCCR | 3 cut(s) | 216, 652, 1863 |
| AcsI | RAATTY | 8 cut(s) | 269, 353, 645, 794, 1036, 1385, 1827, 1980 |
| AcuI | CTGAAG | 3 cut(s) | 465, 1452, 2289 |
| AcyI | GRCGYC | 3 cut(s) | 5, 96, 155 |
| AdeI | CACNNNGTG | 1 cut(s) | 1124 |
| AfaI | GTAC | 5 cut(s) | 116, 686, 1461, 2057, 2419 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 248, 902, 923, 1040, 1128, 2216, 2351 |
| AflIII | ACRYGT | 1 cut(s) | 499 |
| AjnI | CCWGG | 4 cut(s) | 991, 1054, 1876, 1957 |
| AleI | CACNNNNGTG | 1 cut(s) | 242 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 371, 403, 702, 734 |
| Alw21I | GWGCWC | 2 cut(s) | 1000, 1219 |
| Alw26I | GTCTC | 2 cut(s) | 36, 390 |
| AlwI | GGATC | 3 cut(s) | 851, 2229, 2242 |
| ApaI | GGGCCC | 1 cut(s) | 2346 |
| ApoI | RAATTY | 8 cut(s) | 269, 353, 645, 794, 1036, 1385, 1827, 1980 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1438, 1470, 2512, 2544 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 354, 1545 |
| Asp718I | GGTACC | 2 cut(s) | 684, 1459 |
| AspLEI | GCGC | 2 cut(s) | 7, 140 |
| AsuC2I | CCSGG | 3 cut(s) | 24, 918, 1122 |
| AsuHPI | GGTGA | 4 cut(s) | 91, 494, 755, 2441 |
| AvaII | GGWCC | 4 cut(s) | 1031, 1043, 1907, 2113 |
| BaeGI | GKGCMC | 2 cut(s) | 239, 2346 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1718, 1751 |
| BalI | TGGCCA | 2 cut(s) | 654, 1865 |
| BamHI | GGATCC | 1 cut(s) | 2234 |
| BanI | GGYRCC | 5 cut(s) | 4, 684, 1459, 1570, 2206 |
| BanII | GRGCYC | 4 cut(s) | 533, 1000, 1219, 2346 |
| BbsI | GAAGAC | 1 cut(s) | 2039 |
| Bbv12I | GWGCWC | 2 cut(s) | 1000, 1219 |
| BbvCI | CCTCAGC | 1 cut(s) | 1317 |
| BceAI | ACGGC | 2 cut(s) | 151, 163 |
| BciT130I | CCWGG | 4 cut(s) | 993, 1056, 1878, 1959 |
| BciVI | GTATCC | 1 cut(s) | 1746 |
| BclI | TGATCA | 2 cut(s) | 1987, 2320 |
| BcnI | CCSGG | 3 cut(s) | 24, 918, 1122 |
| BcoDI | GTCTC | 2 cut(s) | 36, 390 |
| BfaI | CTAG | 4 cut(s) | 942, 1281, 1400, 2184 |
| BfmI | CTRYAG | 1 cut(s) | 1230 |
| BfoI | RGCGCY | 2 cut(s) | 8, 141 |
| BfuI | GTATCC | 1 cut(s) | 1746 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 224, 2341 |
| Bme1390I | CCNGG | 7 cut(s) | 24, 918, 993, 1056, 1122, 1878, 1959 |
| Bme18I | GGWCC | 4 cut(s) | 1031, 1043, 1907, 2113 |
| BmrFI | CCNGG | 7 cut(s) | 24, 918, 993, 1056, 1122, 1878, 1959 |
| BmrI | ACTGGG | 1 cut(s) | 2241 |
| BmsI | GCATC | 4 cut(s) | 427, 480, 964, 2367 |
| BmuI | ACTGGG | 1 cut(s) | 2241 |
| BpiI | GAAGAC | 1 cut(s) | 2039 |
| BpmI | CTGGAG | 2 cut(s) | 1014, 1038 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1317 |
| BpuEI | CTTGAG | 4 cut(s) | 344, 517, 1514, 2199 |
| BpuMI | CCSGG | 3 cut(s) | 24, 918, 1122 |
| BsaBI | GATNNNNATC | 1 cut(s) | 954 |
| BsaHI | GRCGYC | 3 cut(s) | 5, 96, 155 |
| BsaI | GGTCTC | 1 cut(s) | 390 |
| BsaJI | CCNNGG | 4 cut(s) | 825, 860, 1191, 2116 |
| BsaWI | WCCGGW | 2 cut(s) | 399, 2075 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 110, 140, 702, 732 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 248, 902, 923, 1040, 1128, 2216, 2351 |
| Bse118I | RCCGGY | 2 cut(s) | 7, 280 |
| Bse1I | ACTGG | 8 cut(s) | 885, 1291, 1746, 1999, 2115, 2151, 2236, 2247 |
| Bse3DI | GCAATG | 3 cut(s) | 456, 1323, 2003 |
| Bse8I | GATNNNNATC | 1 cut(s) | 954 |
| BseBI | CCWGG | 4 cut(s) | 993, 1056, 1878, 1959 |
| BseDI | CCNNGG | 4 cut(s) | 825, 860, 1191, 2116 |
| BseGI | GGATG | 6 cut(s) | 323, 442, 1449, 1666, 1967, 2072 |
| BseJI | GATNNNNATC | 1 cut(s) | 954 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 248, 902, 923, 1040, 1128, 2216, 2351 |
| BseMI | GCAATG | 3 cut(s) | 456, 1323, 2003 |
| BseMII | CTCAG | 2 cut(s) | 1308, 2436 |
| BseNI | ACTGG | 8 cut(s) | 885, 1291, 1746, 1999, 2115, 2151, 2236, 2247 |
| BseRI | GAGGAG | 2 cut(s) | 218, 936 |
| BseSI | GKGCMC | 2 cut(s) | 239, 2346 |
| BsgI | GTGCAG | 3 cut(s) | 1784, 2379, 2427 |
| Bsh1285I | CGRYCG | 1 cut(s) | 281 |
| BshNI | GGYRCC | 5 cut(s) | 4, 684, 1459, 1570, 2206 |
| BsiEI | CGRYCG | 1 cut(s) | 281 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1000, 1219 |
| BsiSI | CCGG | 7 cut(s) | 8, 23, 281, 400, 917, 1122, 2076 |
| BslFI | GGGAC | 2 cut(s) | 107, 1211 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 248, 902, 923, 1040, 1128, 2216, 2351 |
| BsmAI | GTCTC | 2 cut(s) | 36, 390 |
| BsmBI | CGTCTC | 1 cut(s) | 36 |
| BsmFI | GGGAC | 2 cut(s) | 107, 1211 |
| BsmI | GAATGC | 2 cut(s) | 1328, 1647 |
| Bso31I | GGTCTC | 1 cut(s) | 390 |
| Bsp120I | GGGCCC | 1 cut(s) | 2342 |
| Bsp1286I | GDGCHC | 5 cut(s) | 239, 533, 1000, 1219, 2346 |
| BspCNI | CTCAG | 2 cut(s) | 1309, 2435 |
| BspPI | GGATC | 3 cut(s) | 851, 2229, 2242 |
| BspQI | GCTCTTC | 2 cut(s) | 46, 1097 |
| BspT107I | GGYRCC | 5 cut(s) | 4, 684, 1459, 1570, 2206 |
| BspTNI | GGTCTC | 1 cut(s) | 390 |
| BsrDI | GCAATG | 3 cut(s) | 456, 1323, 2003 |
| BsrFI | RCCGGY | 2 cut(s) | 7, 280 |
| BsrI | ACTGG | 8 cut(s) | 885, 1291, 1746, 1999, 2115, 2151, 2236, 2247 |
| BssAI | RCCGGY | 2 cut(s) | 7, 280 |
| BssECI | CCNNGG | 4 cut(s) | 825, 860, 1191, 2116 |
| BssNI | GRCGYC | 3 cut(s) | 5, 96, 155 |
| BssT1I | CCWWGG | 3 cut(s) | 825, 1191, 2116 |
| Bst2UI | CCWGG | 4 cut(s) | 993, 1056, 1878, 1959 |
| Bst4CI | ACNGT | 9 cut(s) | 546, 570, 1274, 1358, 1415, 1734, 1893, 2013, 2055 |
| Bst6I | CTCTTC | 2 cut(s) | 46, 1097 |
| BstACI | GRCGYC | 3 cut(s) | 5, 96, 155 |
| BstC8I | GCNNGC | 9 cut(s) | 9, 597, 822, 845, 904, 1219, 1501, 1635, 2169 |
| BstDEI | CTNAG | 4 cut(s) | 392, 1112, 1317, 2422 |
| BstEII | GGTNACC | 2 cut(s) | 482, 2354 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2214 |
| BstF5I | GGATG | 6 cut(s) | 323, 442, 1449, 1666, 1967, 2072 |
| BstH2I | RGCGCY | 2 cut(s) | 8, 141 |
| BstHHI | GCGC | 2 cut(s) | 7, 140 |
| BstMAI | GTCTC | 2 cut(s) | 36, 390 |
| BstMCI | CGRYCG | 1 cut(s) | 281 |
| BstNI | CCWGG | 4 cut(s) | 993, 1056, 1878, 1959 |
| BstNSI | RCATGY | 3 cut(s) | 414, 503, 1637 |
| BstPI | GGTNACC | 2 cut(s) | 482, 2354 |
| BstSCI | CCNGG | 7 cut(s) | 22, 916, 991, 1054, 1120, 1876, 1957 |
| BstSFI | CTRYAG | 1 cut(s) | 1230 |
| BstSLI | GKGCMC | 2 cut(s) | 239, 2346 |
| BstV2I | GAAGAC | 1 cut(s) | 2039 |
| BstX2I | RGATCY | 1 cut(s) | 2234 |
| BstYI | RGATCY | 1 cut(s) | 2234 |
| BsuI | GTATCC | 1 cut(s) | 1746 |
| BtgZI | GCGATG | 2 cut(s) | 71, 2432 |
| BtsCI | GGATG | 6 cut(s) | 323, 442, 1449, 1666, 1967, 2072 |
| BtsIMutI | CAGTG | 8 cut(s) | 892, 1363, 1380, 1730, 1753, 1992, 2108, 2229 |
| Cac8I | GCNNGC | 9 cut(s) | 9, 597, 822, 845, 904, 1219, 1501, 1635, 2169 |
| CfoI | GCGC | 2 cut(s) | 7, 140 |
| Cfr10I | RCCGGY | 2 cut(s) | 7, 280 |
| Csp6I | GTAC | 5 cut(s) | 115, 685, 1460, 2056, 2418 |
| CviAII | CATG | 8 cut(s) | 411, 500, 589, 730, 1634, 1778, 1923, 2000 |
| CviQI | GTAC | 5 cut(s) | 115, 685, 1460, 2056, 2418 |
| DdeI | CTNAG | 4 cut(s) | 392, 1112, 1317, 2422 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DraIII | CACNNNGTG | 1 cut(s) | 1124 |
| EaeI | YGGCCR | 3 cut(s) | 216, 652, 1863 |
| Eam1104I | CTCTTC | 2 cut(s) | 46, 1097 |
| EarI | CTCTTC | 2 cut(s) | 46, 1097 |
| EciI | GGCGGA | 3 cut(s) | 54, 2265, 2450 |
| Ecl136II | GAGCTC | 2 cut(s) | 998, 1217 |
| Eco130I | CCWWGG | 3 cut(s) | 825, 1191, 2116 |
| Eco147I | AGGCCT | 1 cut(s) | 1153 |
| Eco24I | GRGCYC | 4 cut(s) | 533, 1000, 1219, 2346 |
| Eco31I | GGTCTC | 1 cut(s) | 390 |
| Eco47I | GGWCC | 4 cut(s) | 1031, 1043, 1907, 2113 |
| Eco53kI | GAGCTC | 2 cut(s) | 998, 1217 |
| Eco57I | CTGAAG | 3 cut(s) | 465, 1452, 2289 |
| Eco91I | GGTNACC | 2 cut(s) | 482, 2354 |
| EcoICRI | GAGCTC | 2 cut(s) | 998, 1217 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2214 |
| EcoO109I | RGGNCCY | 7 cut(s) | 593, 989, 1043, 1502, 1947, 2187, 2342 |
| EcoO65I | GGTNACC | 2 cut(s) | 482, 2354 |
| EcoRI | GAATTC | 3 cut(s) | 794, 1385, 1827 |
| EcoRII | CCWGG | 4 cut(s) | 991, 1054, 1876, 1957 |
| EcoT14I | CCWWGG | 3 cut(s) | 825, 1191, 2116 |
| EcoT22I | ATGCAT | 1 cut(s) | 2005 |
| EcoT38I | GRGCYC | 4 cut(s) | 533, 1000, 1219, 2346 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 3 cut(s) | 825, 1191, 2116 |
| Esp3I | CGTCTC | 1 cut(s) | 36 |
| FaeI | CATG | 8 cut(s) | 414, 503, 592, 733, 1637, 1781, 1926, 2003 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 754, 786, 831, 863 |
| FaqI | GGGAC | 2 cut(s) | 107, 1211 |
| FatI | CATG | 8 cut(s) | 410, 499, 588, 729, 1633, 1777, 1922, 1999 |
| FauI | CCCGC | 1 cut(s) | 176 |
| FauNDI | CATATG | 1 cut(s) | 1208 |
| FbaI | TGATCA | 2 cut(s) | 1987, 2320 |
| FokI | GGATG | 6 cut(s) | 310, 449, 1456, 1673, 1974, 2059 |
| FriOI | GRGCYC | 4 cut(s) | 533, 1000, 1219, 2346 |
| FspBI | CTAG | 4 cut(s) | 942, 1281, 1400, 2184 |
| GlaI | GCGC | 2 cut(s) | 6, 139 |
| GsuI | CTGGAG | 2 cut(s) | 1014, 1038 |
| HaeII | RGCGCY | 2 cut(s) | 8, 141 |
| HapII | CCGG | 7 cut(s) | 8, 23, 281, 400, 917, 1122, 2076 |
| HhaI | GCGC | 2 cut(s) | 7, 140 |
| Hin1I | GRCGYC | 3 cut(s) | 5, 96, 155 |
| Hin1II | CATG | 8 cut(s) | 414, 503, 592, 733, 1637, 1781, 1926, 2003 |
| Hin6I | GCGC | 2 cut(s) | 5, 138 |
| HinP1I | GCGC | 2 cut(s) | 5, 138 |
| HincII | GTYRAC | 3 cut(s) | 1270, 2460, 2555 |
| HindII | GTYRAC | 3 cut(s) | 1270, 2460, 2555 |
| HindIII | AAGCTT | 2 cut(s) | 845, 1715 |
| HinfI | GANTC | 8 cut(s) | 104, 605, 1255, 1592, 1621, 1709, 1751, 2138 |
| HpaI | GTTAAC | 1 cut(s) | 1270 |
| HpaII | CCGG | 7 cut(s) | 8, 23, 281, 400, 917, 1122, 2076 |
| HphI | GGTGA | 4 cut(s) | 91, 494, 755, 2441 |
| Hpy166II | GTNNAC | 8 cut(s) | 505, 1118, 1270, 1774, 2028, 2222, 2460, 2555 |
| Hpy188I | TCNGA | 9 cut(s) | 109, 445, 864, 1471, 1491, 2320, 2325, 2376, 2425 |
| Hpy8I | GTNNAC | 8 cut(s) | 505, 1118, 1270, 1774, 2028, 2222, 2460, 2555 |
| HpyCH4III | ACNGT | 9 cut(s) | 546, 570, 1274, 1358, 1415, 1734, 1893, 2013, 2055 |
| HpyCH4IV | ACGT | 3 cut(s) | 96, 155, 1510 |
| HpyF3I | CTNAG | 4 cut(s) | 392, 1112, 1317, 2422 |
| HpySE526I | ACGT | 3 cut(s) | 96, 155, 1510 |
| Hsp92I | GRCGYC | 3 cut(s) | 5, 96, 155 |
| Hsp92II | CATG | 8 cut(s) | 414, 503, 592, 733, 1637, 1781, 1926, 2003 |
| HspAI | GCGC | 2 cut(s) | 5, 138 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| KpnI | GGTACC | 2 cut(s) | 688, 1463 |
| KroI | GCCGGC | 1 cut(s) | 7 |
| KroNI | GCCGGC | 1 cut(s) | 9 |
| Ksp22I | TGATCA | 2 cut(s) | 1987, 2320 |
| KspAI | GTTAAC | 1 cut(s) | 1270 |
| LguI | GCTCTTC | 2 cut(s) | 46, 1097 |
| LmnI | GCTCC | 5 cut(s) | 723, 801, 943, 995, 2278 |
| LweI | GCATC | 4 cut(s) | 427, 480, 964, 2367 |
| MaeI | CTAG | 4 cut(s) | 942, 1281, 1400, 2184 |
| MaeII | ACGT | 3 cut(s) | 96, 155, 1510 |
| MaeIII | GTNAC | 5 cut(s) | 97, 151, 482, 1019, 2354 |
| MflI | RGATCY | 1 cut(s) | 2234 |
| MhlI | GDGCHC | 5 cut(s) | 239, 533, 1000, 1219, 2346 |
| MlsI | TGGCCA | 2 cut(s) | 654, 1865 |
| MluNI | TGGCCA | 2 cut(s) | 654, 1865 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MlyI | GAGTC | 2 cut(s) | 98, 1703 |
| MmeI | TCCRAC | 1 cut(s) | 1120 |
| Mox20I | TGGCCA | 2 cut(s) | 654, 1865 |
| Mph1103I | ATGCAT | 1 cut(s) | 2005 |
| MreI | CGCCGGCG | 1 cut(s) | 7 |
| MroNI | GCCGGC | 1 cut(s) | 7 |
| MroXI | GAANNNNTTC | 2 cut(s) | 354, 1545 |
| MscI | TGGCCA | 2 cut(s) | 654, 1865 |
| MseI | TTAA | 6 cut(s) | 261, 384, 759, 1269, 1838, 2192 |
| MslI | CAYNNNNRTG | 3 cut(s) | 242, 1207, 2129 |
| Msp20I | TGGCCA | 2 cut(s) | 654, 1865 |
| MspA1I | CMGCKG | 1 cut(s) | 902 |
| MspI | CCGG | 7 cut(s) | 8, 23, 281, 400, 917, 1122, 2076 |
| MspR9I | CCNGG | 7 cut(s) | 24, 918, 993, 1056, 1122, 1878, 1959 |
| Mva1269I | GAATGC | 2 cut(s) | 1328, 1647 |
| MvaI | CCWGG | 4 cut(s) | 993, 1056, 1878, 1959 |
| NaeI | GCCGGC | 1 cut(s) | 9 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NciI | CCSGG | 3 cut(s) | 24, 918, 1122 |
| NdeI | CATATG | 1 cut(s) | 1208 |
| NgoMIV | GCCGGC | 1 cut(s) | 7 |
| NlaIII | CATG | 8 cut(s) | 414, 503, 592, 733, 1637, 1781, 1926, 2003 |
| NmeAIII | GCCGAG | 2 cut(s) | 555, 796 |
| NmuCI | GTSAC | 3 cut(s) | 97, 151, 482 |
| NsiI | ATGCAT | 1 cut(s) | 2005 |
| NspI | RCATGY | 3 cut(s) | 414, 503, 1637 |
| OliI | CACNNNNGTG | 1 cut(s) | 242 |
| PaeI | GCATGC | 1 cut(s) | 1637 |
| PceI | AGGCCT | 1 cut(s) | 1153 |
| PciI | ACATGT | 1 cut(s) | 499 |
| PciSI | GCTCTTC | 2 cut(s) | 46, 1097 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 93, 161 |
| PctI | GAATGC | 2 cut(s) | 1328, 1647 |
| PdiI | GCCGGC | 1 cut(s) | 9 |
| PdmI | GAANNNNTTC | 2 cut(s) | 354, 1545 |
| PfeI | GAWTC | 6 cut(s) | 605, 1255, 1592, 1621, 1751, 2138 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 902 |
| PfoI | TCCNGGA | 1 cut(s) | 1957 |
| PleI | GAGTC | 2 cut(s) | 98, 1703 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PpsI | GAGTC | 2 cut(s) | 98, 1703 |
| PpuMI | RGGWCCY | 1 cut(s) | 1043 |
| PscI | ACATGT | 1 cut(s) | 499 |
| PsiI | TTATAA | 1 cut(s) | 1689 |
| Psp124BI | GAGCTC | 2 cut(s) | 1000, 1219 |
| Psp5II | RGGWCCY | 1 cut(s) | 1043 |
| Psp6I | CCWGG | 4 cut(s) | 991, 1054, 1876, 1957 |
| PspEI | GGTNACC | 2 cut(s) | 482, 2354 |
| PspGI | CCWGG | 4 cut(s) | 991, 1054, 1876, 1957 |
| PspOMI | GGGCCC | 1 cut(s) | 2342 |
| PspPPI | RGGWCCY | 1 cut(s) | 1043 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 107, 139 |
| PsuI | RGATCY | 1 cut(s) | 2234 |
| PvuII | CAGCTG | 1 cut(s) | 902 |
| RsaI | GTAC | 5 cut(s) | 116, 686, 1461, 2057, 2419 |
| RsaNI | GTAC | 5 cut(s) | 115, 685, 1460, 2056, 2418 |
| RseI | CAYNNNNRTG | 3 cut(s) | 242, 1207, 2129 |
| SacI | GAGCTC | 2 cut(s) | 1000, 1219 |
| SapI | GCTCTTC | 2 cut(s) | 46, 1097 |
| SaqAI | TTAA | 6 cut(s) | 261, 384, 759, 1269, 1838, 2192 |
| SchI | GAGTC | 2 cut(s) | 98, 1703 |
| ScrFI | CCNGG | 7 cut(s) | 24, 918, 993, 1056, 1122, 1878, 1959 |
| SduI | GDGCHC | 5 cut(s) | 239, 533, 1000, 1219, 2346 |
| SfaNI | GCATC | 4 cut(s) | 427, 480, 964, 2367 |
| SfcI | CTRYAG | 1 cut(s) | 1230 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| SgrAI | CRCCGGYG | 1 cut(s) | 7 |
| SinI | GGWCC | 4 cut(s) | 1031, 1043, 1907, 2113 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 242, 1207, 2129 |
| SmlI | CTYRAG | 4 cut(s) | 359, 532, 1529, 2214 |
| SmoI | CTYRAG | 4 cut(s) | 359, 532, 1529, 2214 |
| SphI | GCATGC | 1 cut(s) | 1637 |
| SseBI | AGGCCT | 1 cut(s) | 1153 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SspI | AATATT | 2 cut(s) | 422, 1685 |
| SspMI | CTAG | 4 cut(s) | 942, 1281, 1400, 2184 |
| SstI | GAGCTC | 2 cut(s) | 1000, 1219 |
| StuI | AGGCCT | 1 cut(s) | 1153 |
| StyD4I | CCNGG | 7 cut(s) | 22, 916, 991, 1054, 1120, 1876, 1957 |
| StyI | CCWWGG | 3 cut(s) | 825, 1191, 2116 |
| TaaI | ACNGT | 9 cut(s) | 546, 570, 1274, 1358, 1415, 1734, 1893, 2013, 2055 |
| TaiI | ACGT | 3 cut(s) | 99, 158, 1513 |
| TaqI | TCGA | 8 cut(s) | 62, 164, 267, 277, 514, 792, 1213, 1332 |
| TauI | GCSGC | 6 cut(s) | 14, 17, 39, 215, 218, 2167 |
| TfiI | GAWTC | 6 cut(s) | 605, 1255, 1592, 1621, 1751, 2138 |
| Tru1I | TTAA | 6 cut(s) | 261, 384, 759, 1269, 1838, 2192 |
| Tru9I | TTAA | 6 cut(s) | 261, 384, 759, 1269, 1838, 2192 |
| TscAI | CASTG | 8 cut(s) | 892, 1363, 1387, 1737, 1753, 1999, 2115, 2236 |
| TseFI | GTSAC | 3 cut(s) | 97, 151, 482 |
| Tsp45I | GTSAC | 3 cut(s) | 97, 151, 482 |
| TspDTI | ATGAA | 7 cut(s) | 476, 825, 981, 1159, 1677, 2169, 2378 |
| TspGWI | ACGGA | 1 cut(s) | 316 |
| TspRI | CASTG | 8 cut(s) | 892, 1363, 1387, 1737, 1753, 1999, 2115, 2236 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 902 |
| VpaK11BI | GGWCC | 4 cut(s) | 1031, 1043, 1907, 2113 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2214 |
| XapI | RAATTY | 8 cut(s) | 269, 353, 645, 794, 1036, 1385, 1827, 1980 |
| XceI | RCATGY | 3 cut(s) | 414, 503, 1637 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 832 |
| XmnI | GAANNNNTTC | 2 cut(s) | 354, 1545 |
| XspI | CTAG | 4 cut(s) | 942, 1281, 1400, 2184 |
| ZraI | GACGTC | 2 cut(s) | 97, 156 |
| Zsp2I | ATGCAT | 1 cut(s) | 2005 |