AT2G44040

reductase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
18221694 .. 18224162
2469 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G44040.1

Sequence Viewer

Length: 1044 bp
ATGGCTACGAATGGGTTAATGGCGTCGTCCAGTGTGTTTCTTCATCGCCCGCGTATCGCATTTGCTTCTAGAACGAATCAGACTGTAGGAAAATACGGTAAAGGCCGTGTTAGTTTCATGGGCATTGGGACACGTCGTCTTCCGGTGGTTTTATCCATGACGGCGATGGCGGATTCCGGTGAGGAGGCCGTGAAATCTGTTTTGCCTGGAAATGGCATATCCATCATGGTGAATGGATGTAGTGGCAAAATGGGGAAAGCTGTAATTAAAGCAGCAGACTCTGCAGGAGTAAATATTGTTCCCATATCGTTTGGATCTGCTGGTGAGGATGGTCAGAGAGTTGAGGTCTGTGGAAAGGAGATTACTGTGCACGGTCCAACTGAAAGAGAAAAGGTTCTTTCTTCGGTGTTTGAGAAGCACCCGGAGCTAATTGTTGTCGACTACACAATTCCCTCTGCAGTAAATGATAATGCGGAGCTGTATAGCAAAGTAGGTGTTCCTTTCGTCATGGGAACAACTGGTGGAGATAGGAACAAATTGTATGAAACTGTTGAGGAAGCAAAGATTTATGCTGTGATTTCTCCACAGATGGGTAAACAGGTTGTAGCATTTCTTGCGGCCATGGAGATCATGGCTGAGCAGTTTCCGGGAGCCTTTTCTGGTTATTCCTTGGATGTGATGGAGTCTCATCAAGCTAGCAAATTGGATGCATCCGGAACAGCAAAAGCTGTTATTTCTTGCTTCCAGGAATTGGGTGTGTCTTACGACATGGATCAGATACAATTGATTCGGGATCCAAAACAGCAAGTGGAGATGGTGGGTGTACCTGAGGAGCATATCTCTGGTCACGCTTTCCATCTTTATCACTTGACATCACCCGATGAAACTGTCTCCTTCGAGTTCCAGCACAATGTCTGCGGCCGATCAATTTATGCTGAGGGTACTGTTGATGCCGTGCTCTTCCTCGCCAAAAAGATTCGATTGAAAGCAGATCAGCGAATCTACAACATGATCGATGTCTTGAGAGAGGGAAATATGCGTTGA

Protein Analysis

347

Amino Acids

37.55

Weight (kDa)

6.02

Isoelectric Point (pI)

30.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DapB_N PF01113 73 - 197 6.7e-20 Dihydrodipicolinate reductase, N-terminus
DapB_C PF05173 201 - 341 1e-15 Dihydrodipicolinate reductase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 751
AccI GTMKAC 1 cut(s) 438
AccII CGCG 1 cut(s) 52
AccIII TCCGGA 1 cut(s) 713
AciI CCGC 5 cut(s) 50, 170, 473, 617, 918
AclWI GGATC 4 cut(s) 322, 780, 788, 801
AcoI YGGCCR 2 cut(s) 618, 919
AcyI GRCGYC 1 cut(s) 23
AfaI GTAC 2 cut(s) 825, 943
AfiI CCNNNNNNNGG 3 cut(s) 212, 590, 751
AflIII ACRYGT 1 cut(s) 131
AgsI TTSAA 1 cut(s) 985
AhdI GACNNNNNGTC 1 cut(s) 135
AjiI CACGTC 1 cut(s) 134
AjnI CCWGG 2 cut(s) 205, 744
AluBI AGCT 5 cut(s) 260, 427, 478, 695, 728
AluI AGCT 5 cut(s) 260, 427, 478, 695, 728
Alw21I GWGCWC 2 cut(s) 372, 960
Alw26I GTCTC 2 cut(s) 690, 895
Alw44I GTGCAC 1 cut(s) 368
AlwI GGATC 4 cut(s) 322, 780, 788, 801
AlwNI CAGNNNCTG 1 cut(s) 281
Aor13HI TCCGGA 1 cut(s) 713
AoxI GGCC 4 cut(s) 103, 186, 618, 919
ApaLI GTGCAC 1 cut(s) 368
ApeKI GCWGC 1 cut(s) 272
Asp700I GAANNNNTTC 1 cut(s) 393
AspS9I GGNCC 1 cut(s) 374
AsuC2I CCSGG 2 cut(s) 422, 648
AsuHPI GGTGA 4 cut(s) 191, 241, 335, 867
AsuNHI GCTAGC 1 cut(s) 695
AvaII GGWCC 1 cut(s) 374
AxyI CCTNAGG 1 cut(s) 828
BaeGI GKGCMC 1 cut(s) 372
BamHI GGATCC 1 cut(s) 793
BbsI GAAGAC 1 cut(s) 131
Bbv12I GWGCWC 2 cut(s) 372, 960
BbvCI CCTCAGC 1 cut(s) 936
BbvI GCAGC 1 cut(s) 284
BccI CCATC 7 cut(s) 160, 230, 323, 583, 673, 808, 864
BceAI ACGGC 4 cut(s) 90, 173, 177, 938
BciT130I CCWGG 2 cut(s) 207, 746
BcnI CCSGG 2 cut(s) 422, 648
BcoDI GTCTC 2 cut(s) 690, 895
BfaI CTAG 2 cut(s) 69, 696
BfmI CTRYAG 3 cut(s) 84, 282, 456
BisI GCNGC 3 cut(s) 273, 618, 919
BlpI GCTNAGC 1 cut(s) 636
BlsI GCNGC 3 cut(s) 274, 619, 920
Bme1390I CCNGG 4 cut(s) 207, 422, 648, 746
Bme18I GGWCC 1 cut(s) 374
BmeRI GACNNNNNGTC 1 cut(s) 135
BmgBI CACGTC 1 cut(s) 134
BmgT120I GGNCC 1 cut(s) 374
BmiI GGNNCC 2 cut(s) 652, 795
BmrFI CCNGG 4 cut(s) 207, 422, 648, 746
BmsI GCATC 3 cut(s) 697, 719, 940
BmtI GCTAGC 1 cut(s) 699
BpiI GAAGAC 1 cut(s) 131
BplI GAGNNNNNCTC 2 cut(s) 824, 856
Bpu10I CCTNAGC 1 cut(s) 936
Bpu1102I GCTNAGC 1 cut(s) 636
BpuEI CTTGAG 1 cut(s) 1042
BpuMI CCSGG 2 cut(s) 422, 648
Bsa29I ATCGAT 1 cut(s) 1014
BsaHI GRCGYC 1 cut(s) 23
BsaJI CCNNGG 2 cut(s) 621, 669
BsaWI WCCGGW 3 cut(s) 142, 176, 713
Bsc4I CCNNNNNNNGG 3 cut(s) 212, 590, 751
Bse1I ACTGG 2 cut(s) 30, 523
Bse21I CCTNAGG 1 cut(s) 828
BseAI TCCGGA 1 cut(s) 713
BseBI CCWGG 2 cut(s) 207, 746
BseCI ATCGAT 1 cut(s) 1014
BseDI CCNNGG 2 cut(s) 621, 669
BseGI GGATG 5 cut(s) 242, 334, 679, 710, 712
BseLI CCNNNNNNNGG 3 cut(s) 212, 590, 751
BseMII CTCAG 3 cut(s) 627, 819, 927
BseNI ACTGG 2 cut(s) 30, 523
BseRI GAGGAG 2 cut(s) 197, 845
BseSI GKGCMC 1 cut(s) 372
BseX3I CGGCCG 1 cut(s) 919
BseXI GCAGC 1 cut(s) 284
Bsh1236I CGCG 1 cut(s) 52
Bsh1285I CGRYCG 1 cut(s) 922
BshFI GGCC 4 cut(s) 105, 188, 620, 921
BshVI ATCGAT 1 cut(s) 1014
BsiEI CGRYCG 1 cut(s) 922
BsiHKAI GWGCWC 2 cut(s) 372, 960
BsiSI CCGG 5 cut(s) 143, 177, 422, 647, 714
BslFI GGGAC 1 cut(s) 142
BslI CCNNNNNNNGG 3 cut(s) 212, 590, 751
BsmAI GTCTC 2 cut(s) 690, 895
BsmFI GGGAC 1 cut(s) 142
BsnI GGCC 4 cut(s) 105, 188, 620, 921
Bsp1286I GDGCHC 2 cut(s) 372, 960
Bsp13I TCCGGA 1 cut(s) 713
Bsp143I GATC 7 cut(s) 314, 627, 772, 793, 923, 991, 1011
Bsp1720I GCTNAGC 1 cut(s) 636
Bsp19I CCATGG 1 cut(s) 621
BspACI CCGC 5 cut(s) 50, 170, 473, 617, 918
BspANI GGCC 4 cut(s) 105, 188, 620, 921
BspCNI CTCAG 3 cut(s) 628, 820, 928
BspDI ATCGAT 1 cut(s) 1014
BspEI TCCGGA 1 cut(s) 713
BspFNI CGCG 1 cut(s) 52
BspLI GGNNCC 2 cut(s) 652, 795
BspMAI CTGCAG 2 cut(s) 286, 460
BspOI GCTAGC 1 cut(s) 699
BspPI GGATC 4 cut(s) 322, 780, 788, 801
BspQI GCTCTTC 1 cut(s) 965
BsrI ACTGG 2 cut(s) 30, 523
BssECI CCNNGG 2 cut(s) 621, 669
BssMI GATC 7 cut(s) 314, 627, 772, 793, 923, 991, 1011
BssNI GRCGYC 1 cut(s) 23
BssT1I CCWWGG 2 cut(s) 621, 669
Bst2UI CCWGG 2 cut(s) 207, 746
Bst4CI ACNGT 7 cut(s) 85, 98, 367, 374, 550, 889, 946
Bst6I CTCTTC 1 cut(s) 965
BstACI GRCGYC 1 cut(s) 23
BstAPI GCANNNNNTGC 2 cut(s) 281, 614
BstC8I GCNNGC 2 cut(s) 50, 697
BstDEI CTNAG 3 cut(s) 636, 828, 936
BstDSI CCRYGG 1 cut(s) 621
BstF5I GGATG 5 cut(s) 242, 334, 679, 710, 712
BstFNI CGCG 1 cut(s) 52
BstKTI GATC 7 cut(s) 317, 630, 775, 796, 926, 994, 1014
BstMAI GTCTC 2 cut(s) 690, 895
BstMBI GATC 7 cut(s) 314, 627, 772, 793, 923, 991, 1011
BstMCI CGRYCG 1 cut(s) 922
BstMWI GCNNNNNNNGC 3 cut(s) 281, 424, 614
BstNI CCWGG 2 cut(s) 207, 746
BstSCI CCNGG 4 cut(s) 205, 420, 646, 744
BstSFI CTRYAG 3 cut(s) 84, 282, 456
BstSLI GKGCMC 1 cut(s) 372
BstUI CGCG 1 cut(s) 52
BstV1I GCAGC 1 cut(s) 284
BstV2I GAAGAC 1 cut(s) 131
BstX2I RGATCY 2 cut(s) 314, 793
BstYI RGATCY 2 cut(s) 314, 793
BstZI CGGCCG 1 cut(s) 919
Bsu15I ATCGAT 1 cut(s) 1014
Bsu36I CCTNAGG 1 cut(s) 828
BsuRI GGCC 4 cut(s) 105, 188, 620, 921
BsuTUI ATCGAT 1 cut(s) 1014
BtgI CCRYGG 1 cut(s) 621
BtgZI GCGATG 2 cut(s) 29, 179
BtrI CACGTC 1 cut(s) 134
BtsCI GGATG 5 cut(s) 242, 334, 679, 710, 712
BtsIMutI CAGTG 1 cut(s) 37
Cac8I GCNNGC 2 cut(s) 50, 697
CaiI CAGNNNCTG 1 cut(s) 281
Cfr13I GGNCC 1 cut(s) 374
ClaI ATCGAT 1 cut(s) 1014
CseI GACGC 1 cut(s) 12
Csp6I GTAC 2 cut(s) 824, 942
CviAII CATG 8 cut(s) 118, 157, 226, 508, 622, 631, 769, 1009
CviQI GTAC 2 cut(s) 824, 942
DdeI CTNAG 3 cut(s) 636, 828, 936
DpnI GATC 7 cut(s) 316, 629, 774, 795, 925, 993, 1013
DpnII GATC 7 cut(s) 314, 627, 772, 793, 923, 991, 1011
DriI GACNNNNNGTC 1 cut(s) 135
EaeI YGGCCR 2 cut(s) 618, 919
EagI CGGCCG 1 cut(s) 919
Eam1104I CTCTTC 1 cut(s) 965
Eam1105I GACNNNNNGTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 965
EciI GGCGGA 1 cut(s) 185
EclXI CGGCCG 1 cut(s) 919
Eco130I CCWWGG 2 cut(s) 621, 669
Eco47I GGWCC 1 cut(s) 374
Eco52I CGGCCG 1 cut(s) 919
Eco81I CCTNAGG 1 cut(s) 828
EcoRII CCWGG 2 cut(s) 205, 744
EcoT14I CCWWGG 2 cut(s) 621, 669
EcoT22I ATGCAT 1 cut(s) 712
ErhI CCWWGG 2 cut(s) 621, 669
FaeI CATG 8 cut(s) 121, 160, 229, 511, 625, 634, 772, 1012
FaqI GGGAC 1 cut(s) 142
FatI CATG 8 cut(s) 117, 156, 225, 507, 621, 630, 768, 1008
FauI CCCGC 1 cut(s) 57
FblI GTMKAC 1 cut(s) 438
Fnu4HI GCNGC 3 cut(s) 273, 618, 919
FokI GGATG 5 cut(s) 249, 341, 686, 697, 719
Fsp4HI GCNGC 3 cut(s) 273, 618, 919
FspBI CTAG 2 cut(s) 69, 696
GluI GCNGC 3 cut(s) 273, 618, 919
HaeIII GGCC 4 cut(s) 105, 188, 620, 921
HapII CCGG 5 cut(s) 143, 177, 422, 647, 714
HgaI GACGC 1 cut(s) 12
Hin1I GRCGYC 1 cut(s) 23
Hin1II CATG 8 cut(s) 121, 160, 229, 511, 625, 634, 772, 1012
HincII GTYRAC 1 cut(s) 439
HindII GTYRAC 1 cut(s) 439
HinfI GANTC 7 cut(s) 76, 173, 278, 683, 787, 976, 999
HpaII CCGG 5 cut(s) 143, 177, 422, 647, 714
HphI GGTGA 4 cut(s) 191, 241, 335, 867
Hpy166II GTNNAC 4 cut(s) 370, 439, 596, 824
Hpy188I TCNGA 3 cut(s) 81, 336, 777
Hpy188III TCNNGA 4 cut(s) 69, 714, 791, 1021
Hpy8I GTNNAC 4 cut(s) 370, 439, 596, 824
Hpy99I CGWCG 2 cut(s) 28, 138
HpyAV CCTTC 1 cut(s) 904
HpyCH4III ACNGT 7 cut(s) 85, 98, 367, 374, 550, 889, 946
HpyCH4IV ACGT 1 cut(s) 133
HpyCH4V TGCA 4 cut(s) 284, 370, 458, 710
HpyF10VI GCNNNNNNNGC 3 cut(s) 281, 424, 614
HpyF3I CTNAG 3 cut(s) 636, 828, 936
HpySE526I ACGT 1 cut(s) 133
Hsp92I GRCGYC 1 cut(s) 23
Hsp92II CATG 8 cut(s) 121, 160, 229, 511, 625, 634, 772, 1012
Kpn2I TCCGGA 1 cut(s) 713
Kzo9I GATC 7 cut(s) 314, 627, 772, 793, 923, 991, 1011
LguI GCTCTTC 1 cut(s) 965
LmnI GCTCC 4 cut(s) 424, 475, 650, 832
Lsp1109I GCAGC 1 cut(s) 284
LweI GCATC 3 cut(s) 697, 719, 940
MaeI CTAG 2 cut(s) 69, 696
MaeII ACGT 1 cut(s) 133
MaeIII GTNAC 1 cut(s) 845
MalI GATC 7 cut(s) 316, 629, 774, 795, 925, 993, 1013
MboI GATC 7 cut(s) 314, 627, 772, 793, 923, 991, 1011
MboII GAAGA 4 cut(s) 32, 131, 393, 952
MfeI CAATTG 1 cut(s) 782
MflI RGATCY 2 cut(s) 314, 793
MhlI GDGCHC 2 cut(s) 372, 960
MluCI AATT 8 cut(s) 264, 429, 447, 536, 701, 749, 782, 927
MlyI GAGTC 2 cut(s) 272, 692
MmeI TCCRAC 1 cut(s) 401
Mph1103I ATGCAT 1 cut(s) 712
MroI TCCGGA 1 cut(s) 713
MroXI GAANNNNTTC 1 cut(s) 393
MseI TTAA 2 cut(s) 17, 267
MslI CAYNNNNRTG 1 cut(s) 227
MspI CCGG 5 cut(s) 143, 177, 422, 647, 714
MspR9I CCNGG 4 cut(s) 207, 422, 648, 746
MunI CAATTG 1 cut(s) 782
MvaI CCWGG 2 cut(s) 207, 746
MvnI CGCG 1 cut(s) 52
MwoI GCNNNNNNNGC 3 cut(s) 281, 424, 614
NciI CCSGG 2 cut(s) 422, 648
NcoI CCATGG 1 cut(s) 621
NdeII GATC 7 cut(s) 314, 627, 772, 793, 923, 991, 1011
NheI GCTAGC 1 cut(s) 695
NlaIII CATG 8 cut(s) 121, 160, 229, 511, 625, 634, 772, 1012
NlaIV GGNNCC 2 cut(s) 652, 795
NmuCI GTSAC 1 cut(s) 845
NsiI ATGCAT 1 cut(s) 712
PciSI GCTCTTC 1 cut(s) 965
PdmI GAANNNNTTC 1 cut(s) 393
PfeI GAWTC 5 cut(s) 76, 173, 787, 976, 999
PflMI CCANNNNNTGG 1 cut(s) 751
PfoI TCCNGGA 2 cut(s) 646, 744
PkrI GCNGC 3 cut(s) 274, 619, 920
PleI GAGTC 2 cut(s) 272, 691
PpsI GAGTC 2 cut(s) 272, 691
Psp6I CCWGG 2 cut(s) 205, 744
PspGI CCWGG 2 cut(s) 205, 744
PspN4I GGNNCC 2 cut(s) 652, 795
PspPI GGNCC 1 cut(s) 374
PsrI GAACNNNNNNTAC 2 cut(s) 282, 314
PstI CTGCAG 2 cut(s) 286, 460
PstNI CAGNNNCTG 1 cut(s) 281
PsuI RGATCY 2 cut(s) 314, 793
RsaI GTAC 2 cut(s) 825, 943
RsaNI GTAC 2 cut(s) 824, 942
RseI CAYNNNNRTG 1 cut(s) 227
SalI GTCGAC 1 cut(s) 437
SapI GCTCTTC 1 cut(s) 965
SaqAI TTAA 2 cut(s) 17, 267
SatI GCNGC 3 cut(s) 273, 618, 919
Sau3AI GATC 7 cut(s) 314, 627, 772, 793, 923, 991, 1011
Sau96I GGNCC 1 cut(s) 374
SchI GAGTC 2 cut(s) 272, 692
ScrFI CCNGG 4 cut(s) 207, 422, 648, 746
SduI GDGCHC 2 cut(s) 372, 960
SfaNI GCATC 3 cut(s) 697, 719, 940
SfcI CTRYAG 3 cut(s) 84, 282, 456
SinI GGWCC 1 cut(s) 374
SmiMI CAYNNNNRTG 1 cut(s) 227
SmlI CTYRAG 1 cut(s) 1021
SmoI CTYRAG 1 cut(s) 1021
Sse9I AATT 8 cut(s) 264, 429, 447, 536, 701, 749, 782, 927
SsiI CCGC 5 cut(s) 50, 170, 473, 617, 918
SspI AATATT 1 cut(s) 295
SspMI CTAG 2 cut(s) 69, 696
StyD4I CCNGG 4 cut(s) 205, 420, 646, 744
StyI CCWWGG 2 cut(s) 621, 669
TaaI ACNGT 7 cut(s) 85, 98, 367, 374, 550, 889, 946
TaiI ACGT 1 cut(s) 136
TaqI TCGA 4 cut(s) 438, 897, 979, 1014
TasI AATT 8 cut(s) 264, 429, 447, 536, 701, 749, 782, 927
TauI GCSGC 2 cut(s) 620, 921
TfiI GAWTC 5 cut(s) 76, 173, 787, 976, 999
Tru1I TTAA 2 cut(s) 17, 267
Tru9I TTAA 2 cut(s) 17, 267
TscAI CASTG 1 cut(s) 37
TseFI GTSAC 1 cut(s) 845
TseI GCWGC 1 cut(s) 272
Tsp45I GTSAC 1 cut(s) 845
TspDTI ATGAA 4 cut(s) 32, 106, 558, 897
TspRI CASTG 1 cut(s) 37
Van91I CCANNNNNTGG 1 cut(s) 751
VneI GTGCAC 1 cut(s) 368
VpaK11BI GGWCC 1 cut(s) 374
XbaI TCTAGA 1 cut(s) 68
XcmI CCANNNNNNNNNTGG 2 cut(s) 163, 628
XmiI GTMKAC 1 cut(s) 438
XmnI GAANNNNTTC 1 cut(s) 393
XspI CTAG 2 cut(s) 69, 696
Zsp2I ATGCAT 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.