SRP54-type protein, GTPase domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45770 |
| fragaria_vesca | FvH4_7g13420 FvH4_7g13420 |
| malus_domestica | MD01G1049200.v1.1 MD07G1126100.v1.1 |
| prunus_persica | Prupe.2G157700_v2.0.a1 Prupe.2G158000_v2.0.a1 |
| pyrus_communis | pycom07g12060 |
| rosa_chinensis | RchiOBHm_Chr1g0352781 RchiOBHm_Chr1g0352811 RchiOBHm_Chr1g0352821 |
| rosa_laevigata | RLG00000028314 |
| rosa_multiflora | Rmu_co8452643.1_g000001 Rmu_sc0006445.1_g000007 Rmu_sc0006445.1_g000013 |
| rosa_roxburghii | Rroxscaffold_4G00302380 |
| rosa_rugosa | Rorug01G0231700 |
| rosa_samantha | Rh1AG244900 Rh1BG215600 Rh1CG228700 Rh1DG241600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 500 |
| AarI | CACCTGC | 1 cut(s) | 587 |
| AatII | GACGTC | 1 cut(s) | 775 |
| Acc36I | ACCTGC | 1 cut(s) | 587 |
| AccBSI | CCGCTC | 1 cut(s) | 138 |
| AccII | CGCG | 1 cut(s) | 151 |
| AccIII | TCCGGA | 2 cut(s) | 206, 1069 |
| AciI | CCGC | 2 cut(s) | 138, 151 |
| AclWI | GGATC | 3 cut(s) | 74, 853, 1061 |
| AcoI | YGGCCR | 1 cut(s) | 126 |
| AcsI | RAATTY | 2 cut(s) | 92, 914 |
| AcuI | CTGAAG | 1 cut(s) | 696 |
| AcyI | GRCGYC | 1 cut(s) | 772 |
| AfaI | GTAC | 1 cut(s) | 753 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 63, 86, 117, 124 |
| AgeI | ACCGGT | 1 cut(s) | 938 |
| AgsI | TTSAA | 5 cut(s) | 421, 473, 565, 892, 919 |
| AjiI | CACGTC | 1 cut(s) | 190 |
| AluBI | AGCT | 6 cut(s) | 250, 469, 494, 550, 908, 1043 |
| AluI | AGCT | 6 cut(s) | 250, 469, 494, 550, 908, 1043 |
| Alw21I | GWGCWC | 3 cut(s) | 125, 252, 850 |
| Alw26I | GTCTC | 3 cut(s) | 675, 779, 844 |
| Alw44I | GTGCAC | 1 cut(s) | 846 |
| AlwI | GGATC | 3 cut(s) | 74, 853, 1061 |
| Aor13HI | TCCGGA | 2 cut(s) | 206, 1069 |
| AoxI | GGCC | 2 cut(s) | 126, 177 |
| ApaLI | GTGCAC | 1 cut(s) | 846 |
| ApeKI | GCWGC | 4 cut(s) | 593, 614, 617, 695 |
| ApoI | RAATTY | 2 cut(s) | 92, 914 |
| AseI | ATTAAT | 1 cut(s) | 587 |
| AsiGI | ACCGGT | 1 cut(s) | 938 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 200 |
| AspLEI | GCGC | 1 cut(s) | 310 |
| AspS9I | GGNCC | 2 cut(s) | 131, 329 |
| AsuC2I | CCSGG | 1 cut(s) | 112 |
| AsuHPI | GGTGA | 3 cut(s) | 11, 611, 928 |
| AvaII | GGWCC | 2 cut(s) | 131, 329 |
| BaeGI | GKGCMC | 1 cut(s) | 850 |
| BanII | GRGCYC | 1 cut(s) | 252 |
| BbsI | GAAGAC | 1 cut(s) | 536 |
| Bbv12I | GWGCWC | 3 cut(s) | 125, 252, 850 |
| BbvI | GCAGC | 4 cut(s) | 605, 626, 629, 707 |
| BccI | CCATC | 3 cut(s) | 790, 869, 956 |
| BceAI | ACGGC | 1 cut(s) | 34 |
| BcnI | CCSGG | 1 cut(s) | 112 |
| BcoDI | GTCTC | 3 cut(s) | 675, 779, 844 |
| BfaI | CTAG | 5 cut(s) | 222, 233, 909, 959, 972 |
| BfmI | CTRYAG | 1 cut(s) | 1044 |
| BfoI | RGCGCY | 1 cut(s) | 311 |
| BfuAI | ACCTGC | 1 cut(s) | 587 |
| BglII | AGATCT | 1 cut(s) | 1051 |
| BisI | GCNGC | 5 cut(s) | 152, 594, 615, 618, 696 |
| BlsI | GCNGC | 5 cut(s) | 153, 595, 616, 619, 697 |
| Bme1390I | CCNGG | 1 cut(s) | 112 |
| Bme18I | GGWCC | 2 cut(s) | 131, 329 |
| BmgBI | CACGTC | 1 cut(s) | 190 |
| BmgT120I | GGNCC | 2 cut(s) | 131, 329 |
| BmiI | GGNNCC | 1 cut(s) | 116 |
| BmrFI | CCNGG | 1 cut(s) | 112 |
| BmrI | ACTGGG | 1 cut(s) | 663 |
| BmsI | GCATC | 2 cut(s) | 403, 429 |
| BmuI | ACTGGG | 1 cut(s) | 663 |
| BpiI | GAAGAC | 1 cut(s) | 536 |
| BpuMI | CCSGG | 1 cut(s) | 112 |
| BsaHI | GRCGYC | 1 cut(s) | 772 |
| BsaJI | CCNNGG | 1 cut(s) | 699 |
| BsaWI | WCCGGW | 4 cut(s) | 117, 206, 938, 1069 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 969, 999, 1029, 1059 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 63, 86, 117, 124 |
| Bse118I | RCCGGY | 1 cut(s) | 938 |
| Bse1I | ACTGG | 2 cut(s) | 658, 889 |
| BseAI | TCCGGA | 2 cut(s) | 206, 1069 |
| BseDI | CCNNGG | 1 cut(s) | 699 |
| BseGI | GGATG | 1 cut(s) | 418 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 63, 86, 117, 124 |
| BseMII | CTCAG | 1 cut(s) | 97 |
| BseNI | ACTGG | 2 cut(s) | 658, 889 |
| BseRI | GAGGAG | 4 cut(s) | 46, 102, 815, 990 |
| BseSI | GKGCMC | 1 cut(s) | 850 |
| BseX3I | CGGCCG | 1 cut(s) | 126 |
| BseXI | GCAGC | 4 cut(s) | 605, 626, 629, 707 |
| BseYI | CCCAGC | 1 cut(s) | 154 |
| Bsh1236I | CGCG | 1 cut(s) | 151 |
| Bsh1285I | CGRYCG | 1 cut(s) | 129 |
| BshFI | GGCC | 2 cut(s) | 128, 179 |
| BshTI | ACCGGT | 1 cut(s) | 938 |
| BsiEI | CGRYCG | 1 cut(s) | 129 |
| BsiHKAI | GWGCWC | 3 cut(s) | 125, 252, 850 |
| BsiSI | CCGG | 7 cut(s) | 36, 112, 118, 129, 207, 939, 1070 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 63, 86, 117, 124 |
| BsmAI | GTCTC | 3 cut(s) | 675, 779, 844 |
| BsmBI | CGTCTC | 1 cut(s) | 779 |
| BsmI | GAATGC | 2 cut(s) | 1011, 1090 |
| BsnI | GGCC | 2 cut(s) | 128, 179 |
| Bsp1286I | GDGCHC | 3 cut(s) | 125, 252, 850 |
| Bsp13I | TCCGGA | 2 cut(s) | 206, 1069 |
| Bsp143I | GATC | 4 cut(s) | 66, 858, 1051, 1066 |
| BspACI | CCGC | 2 cut(s) | 138, 151 |
| BspANI | GGCC | 2 cut(s) | 128, 179 |
| BspCNI | CTCAG | 1 cut(s) | 96 |
| BspEI | TCCGGA | 2 cut(s) | 206, 1069 |
| BspFNI | CGCG | 1 cut(s) | 151 |
| BspLI | GGNNCC | 1 cut(s) | 116 |
| BspMI | ACCTGC | 1 cut(s) | 587 |
| BspPI | GGATC | 3 cut(s) | 74, 853, 1061 |
| BsrBI | CCGCTC | 1 cut(s) | 138 |
| BsrFI | RCCGGY | 1 cut(s) | 938 |
| BsrI | ACTGG | 2 cut(s) | 658, 889 |
| BssAI | RCCGGY | 1 cut(s) | 938 |
| BssECI | CCNNGG | 1 cut(s) | 699 |
| BssMI | GATC | 4 cut(s) | 66, 858, 1051, 1066 |
| BssNI | GRCGYC | 1 cut(s) | 772 |
| Bst4CI | ACNGT | 4 cut(s) | 343, 703, 756, 791 |
| Bst6I | CTCTTC | 2 cut(s) | 263, 297 |
| BstACI | GRCGYC | 1 cut(s) | 772 |
| BstC8I | GCNNGC | 3 cut(s) | 444, 552, 814 |
| BstDEI | CTNAG | 5 cut(s) | 83, 216, 362, 447, 579 |
| BstDSI | CCRYGG | 1 cut(s) | 699 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 84 |
| BstF5I | GGATG | 1 cut(s) | 418 |
| BstFNI | CGCG | 1 cut(s) | 151 |
| BstH2I | RGCGCY | 1 cut(s) | 311 |
| BstHHI | GCGC | 1 cut(s) | 310 |
| BstKTI | GATC | 4 cut(s) | 69, 861, 1054, 1069 |
| BstMAI | GTCTC | 3 cut(s) | 675, 779, 844 |
| BstMBI | GATC | 4 cut(s) | 66, 858, 1051, 1066 |
| BstMCI | CGRYCG | 1 cut(s) | 129 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 695 |
| BstNSI | RCATGY | 1 cut(s) | 898 |
| BstSCI | CCNGG | 1 cut(s) | 110 |
| BstSFI | CTRYAG | 1 cut(s) | 1044 |
| BstSLI | GKGCMC | 1 cut(s) | 850 |
| BstUI | CGCG | 1 cut(s) | 151 |
| BstV1I | GCAGC | 4 cut(s) | 605, 626, 629, 707 |
| BstV2I | GAAGAC | 1 cut(s) | 536 |
| BstX2I | RGATCY | 2 cut(s) | 858, 1051 |
| BstYI | RGATCY | 2 cut(s) | 858, 1051 |
| BstZI | CGGCCG | 1 cut(s) | 126 |
| BsuRI | GGCC | 2 cut(s) | 128, 179 |
| BtgI | CCRYGG | 1 cut(s) | 699 |
| BtrI | CACGTC | 1 cut(s) | 190 |
| BtsCI | GGATG | 1 cut(s) | 418 |
| BtsI | GCAGTG | 1 cut(s) | 831 |
| BtsIMutI | CAGTG | 3 cut(s) | 831, 882, 997 |
| BveI | ACCTGC | 1 cut(s) | 587 |
| Cac8I | GCNNGC | 3 cut(s) | 444, 552, 814 |
| CfoI | GCGC | 1 cut(s) | 310 |
| Cfr10I | RCCGGY | 1 cut(s) | 938 |
| Cfr13I | GGNCC | 2 cut(s) | 131, 329 |
| CpoI | CGGWCCG | 1 cut(s) | 131 |
| Csp6I | GTAC | 1 cut(s) | 752 |
| CspAI | ACCGGT | 1 cut(s) | 938 |
| CspI | CGGWCCG | 1 cut(s) | 131 |
| CviAII | CATG | 2 cut(s) | 376, 895 |
| CviQI | GTAC | 1 cut(s) | 752 |
| DdeI | CTNAG | 5 cut(s) | 83, 216, 362, 447, 579 |
| DpnI | GATC | 4 cut(s) | 68, 860, 1053, 1068 |
| DpnII | GATC | 4 cut(s) | 66, 858, 1051, 1066 |
| EaeI | YGGCCR | 1 cut(s) | 126 |
| EagI | CGGCCG | 1 cut(s) | 126 |
| Eam1104I | CTCTTC | 2 cut(s) | 263, 297 |
| EarI | CTCTTC | 2 cut(s) | 263, 297 |
| Ecl136II | GAGCTC | 1 cut(s) | 250 |
| EclXI | CGGCCG | 1 cut(s) | 126 |
| Eco24I | GRGCYC | 1 cut(s) | 252 |
| Eco32I | GATATC | 1 cut(s) | 373 |
| Eco47I | GGWCC | 2 cut(s) | 131, 329 |
| Eco52I | CGGCCG | 1 cut(s) | 126 |
| Eco53kI | GAGCTC | 1 cut(s) | 250 |
| Eco57I | CTGAAG | 1 cut(s) | 696 |
| EcoICRI | GAGCTC | 1 cut(s) | 250 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 84 |
| EcoRI | GAATTC | 1 cut(s) | 914 |
| EcoRV | GATATC | 1 cut(s) | 373 |
| EcoT22I | ATGCAT | 1 cut(s) | 418 |
| EcoT38I | GRGCYC | 1 cut(s) | 252 |
| Esp3I | CGTCTC | 1 cut(s) | 779 |
| FaeI | CATG | 2 cut(s) | 379, 898 |
| FaiI | YATR | 9 cut(s) | 44, 377, 500, 558, 640, 744, 780, 896, 1091 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 294, 326 |
| FatI | CATG | 2 cut(s) | 375, 894 |
| Fnu4HI | GCNGC | 5 cut(s) | 152, 594, 615, 618, 696 |
| FokI | GGATG | 1 cut(s) | 425 |
| FriOI | GRGCYC | 1 cut(s) | 252 |
| Fsp4HI | GCNGC | 5 cut(s) | 152, 594, 615, 618, 696 |
| FspBI | CTAG | 5 cut(s) | 222, 233, 909, 959, 972 |
| GlaI | GCGC | 1 cut(s) | 309 |
| GluI | GCNGC | 5 cut(s) | 152, 594, 615, 618, 696 |
| GsaI | CCCAGC | 1 cut(s) | 158 |
| HaeII | RGCGCY | 1 cut(s) | 311 |
| HaeIII | GGCC | 2 cut(s) | 128, 179 |
| HapII | CCGG | 7 cut(s) | 36, 112, 118, 129, 207, 939, 1070 |
| HhaI | GCGC | 1 cut(s) | 310 |
| Hin1I | GRCGYC | 1 cut(s) | 772 |
| Hin1II | CATG | 2 cut(s) | 379, 898 |
| Hin6I | GCGC | 1 cut(s) | 308 |
| HinP1I | GCGC | 1 cut(s) | 308 |
| HinfI | GANTC | 3 cut(s) | 141, 210, 265 |
| HpaII | CCGG | 7 cut(s) | 36, 112, 118, 129, 207, 939, 1070 |
| HphI | GGTGA | 3 cut(s) | 11, 611, 928 |
| Hpy166II | GTNNAC | 3 cut(s) | 101, 517, 848 |
| Hpy188I | TCNGA | 4 cut(s) | 61, 71, 86, 322 |
| Hpy188III | TCNNGA | 7 cut(s) | 207, 262, 290, 381, 396, 768, 1070 |
| Hpy8I | GTNNAC | 3 cut(s) | 101, 517, 848 |
| Hpy99I | CGWCG | 2 cut(s) | 191, 248 |
| HpyAV | CCTTC | 6 cut(s) | 169, 415, 566, 671, 724, 731 |
| HpyCH4III | ACNGT | 4 cut(s) | 343, 703, 756, 791 |
| HpyCH4IV | ACGT | 3 cut(s) | 40, 189, 772 |
| HpyCH4V | TGCA | 3 cut(s) | 416, 816, 848 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 695 |
| HpyF3I | CTNAG | 5 cut(s) | 83, 216, 362, 447, 579 |
| HpySE526I | ACGT | 3 cut(s) | 40, 189, 772 |
| Hsp92I | GRCGYC | 1 cut(s) | 772 |
| Hsp92II | CATG | 2 cut(s) | 379, 898 |
| HspAI | GCGC | 1 cut(s) | 308 |
| Kpn2I | TCCGGA | 2 cut(s) | 206, 1069 |
| Kzo9I | GATC | 4 cut(s) | 66, 858, 1051, 1066 |
| Lsp1109I | GCAGC | 4 cut(s) | 605, 626, 629, 707 |
| LweI | GCATC | 2 cut(s) | 403, 429 |
| MaeI | CTAG | 5 cut(s) | 222, 233, 909, 959, 972 |
| MaeII | ACGT | 3 cut(s) | 40, 189, 772 |
| MaeIII | GTNAC | 1 cut(s) | 623 |
| MalI | GATC | 4 cut(s) | 68, 860, 1053, 1068 |
| MbiI | CCGCTC | 1 cut(s) | 138 |
| MboI | GATC | 4 cut(s) | 66, 858, 1051, 1066 |
| MboII | GAAGA | 7 cut(s) | 3, 136, 250, 314, 346, 541, 1061 |
| MfeI | CAATTG | 1 cut(s) | 473 |
| MflI | RGATCY | 2 cut(s) | 858, 1051 |
| MhlI | GDGCHC | 3 cut(s) | 125, 252, 850 |
| MluCI | AATT | 8 cut(s) | 92, 296, 348, 473, 629, 784, 914, 1004 |
| MmeI | TCCRAC | 3 cut(s) | 414, 490, 1081 |
| Mph1103I | ATGCAT | 1 cut(s) | 418 |
| MroI | TCCGGA | 2 cut(s) | 206, 1069 |
| MroXI | GAANNNNTTC | 1 cut(s) | 200 |
| MseI | TTAA | 4 cut(s) | 168, 408, 587, 1099 |
| MspA1I | CMGCKG | 1 cut(s) | 494 |
| MspI | CCGG | 7 cut(s) | 36, 112, 118, 129, 207, 939, 1070 |
| MspR9I | CCNGG | 1 cut(s) | 112 |
| MunI | CAATTG | 1 cut(s) | 473 |
| Mva1269I | GAATGC | 2 cut(s) | 1011, 1090 |
| MvnI | CGCG | 1 cut(s) | 151 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 695 |
| NciI | CCSGG | 1 cut(s) | 112 |
| NdeII | GATC | 4 cut(s) | 66, 858, 1051, 1066 |
| NlaIII | CATG | 2 cut(s) | 379, 898 |
| NlaIV | GGNNCC | 1 cut(s) | 116 |
| NmeAIII | GCCGAG | 1 cut(s) | 104 |
| NmuCI | GTSAC | 1 cut(s) | 623 |
| NsiI | ATGCAT | 1 cut(s) | 418 |
| NspI | RCATGY | 1 cut(s) | 898 |
| PaqCI | CACCTGC | 1 cut(s) | 587 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 131 |
| PctI | GAATGC | 2 cut(s) | 1011, 1090 |
| PdmI | GAANNNNTTC | 1 cut(s) | 200 |
| PfeI | GAWTC | 3 cut(s) | 141, 210, 265 |
| PinAI | ACCGGT | 1 cut(s) | 938 |
| PkrI | GCNGC | 5 cut(s) | 153, 595, 616, 619, 697 |
| PshBI | ATTAAT | 1 cut(s) | 587 |
| PsiI | TTATAA | 1 cut(s) | 500 |
| Psp124BI | GAGCTC | 1 cut(s) | 252 |
| PspFI | CCCAGC | 1 cut(s) | 154 |
| PspN4I | GGNNCC | 1 cut(s) | 116 |
| PspPI | GGNCC | 2 cut(s) | 131, 329 |
| PsuI | RGATCY | 2 cut(s) | 858, 1051 |
| PvuII | CAGCTG | 1 cut(s) | 494 |
| RsaI | GTAC | 1 cut(s) | 753 |
| RsaNI | GTAC | 1 cut(s) | 752 |
| Rsr2I | CGGWCCG | 1 cut(s) | 131 |
| RsrII | CGGWCCG | 1 cut(s) | 131 |
| SacI | GAGCTC | 1 cut(s) | 252 |
| SaqAI | TTAA | 4 cut(s) | 168, 408, 587, 1099 |
| SatI | GCNGC | 5 cut(s) | 152, 594, 615, 618, 696 |
| Sau3AI | GATC | 4 cut(s) | 66, 858, 1051, 1066 |
| Sau96I | GGNCC | 2 cut(s) | 131, 329 |
| ScrFI | CCNGG | 1 cut(s) | 112 |
| SduI | GDGCHC | 3 cut(s) | 125, 252, 850 |
| SfaNI | GCATC | 2 cut(s) | 403, 429 |
| SfcI | CTRYAG | 1 cut(s) | 1044 |
| SinI | GGWCC | 2 cut(s) | 131, 329 |
| Sse9I | AATT | 8 cut(s) | 92, 296, 348, 473, 629, 784, 914, 1004 |
| SsiI | CCGC | 2 cut(s) | 138, 151 |
| SspMI | CTAG | 5 cut(s) | 222, 233, 909, 959, 972 |
| SstI | GAGCTC | 1 cut(s) | 252 |
| StyD4I | CCNGG | 1 cut(s) | 110 |
| TaaI | ACNGT | 4 cut(s) | 343, 703, 756, 791 |
| TaiI | ACGT | 3 cut(s) | 43, 192, 775 |
| TaqI | TCGA | 1 cut(s) | 243 |
| TaqII | GACCGA | 3 cut(s) | 148, 297, 346 |
| TasI | AATT | 8 cut(s) | 92, 296, 348, 473, 629, 784, 914, 1004 |
| TatI | WGTACW | 1 cut(s) | 751 |
| TauI | GCSGC | 1 cut(s) | 154 |
| TfiI | GAWTC | 3 cut(s) | 141, 210, 265 |
| Tru1I | TTAA | 4 cut(s) | 168, 408, 587, 1099 |
| Tru9I | TTAA | 4 cut(s) | 168, 408, 587, 1099 |
| TscAI | CASTG | 3 cut(s) | 831, 889, 997 |
| TseFI | GTSAC | 1 cut(s) | 623 |
| TseI | GCWGC | 4 cut(s) | 593, 614, 617, 695 |
| Tsp45I | GTSAC | 1 cut(s) | 623 |
| TspDTI | ATGAA | 2 cut(s) | 309, 585 |
| TspGWI | ACGGA | 2 cut(s) | 79, 534 |
| TspRI | CASTG | 3 cut(s) | 831, 889, 997 |
| VneI | GTGCAC | 1 cut(s) | 846 |
| VpaK11BI | GGWCC | 2 cut(s) | 131, 329 |
| VspI | ATTAAT | 1 cut(s) | 587 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 84 |
| XapI | RAATTY | 2 cut(s) | 92, 914 |
| XceI | RCATGY | 1 cut(s) | 898 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 187 |
| XmnI | GAANNNNTTC | 1 cut(s) | 200 |
| XspI | CTAG | 5 cut(s) | 222, 233, 909, 959, 972 |
| ZraI | GACGTC | 1 cut(s) | 773 |
| Zsp2I | ATGCAT | 1 cut(s) | 418 |