mRNA processing
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G48160 AT2G48160 AT3G63070 |
| fragaria_vesca | FvH4_2g23910 FvH4_2g23910 FvH4_2g23910 |
| malus_domestica | MD03G1268600.v1.1 MD11G1289400.v1.1 |
| prunus_persica | Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 |
| pyrus_communis | pycom11g25680 |
| rosa_chinensis | RchiOBHm_Chr6g0291521 RchiOBHm_Chr6g0291531 |
| rosa_laevigata | RLG00000012109 |
| rosa_multiflora | Rmu_co8000626.1_g000001 Rmu_co8259725.1_g000001 Rmu_co8294861.1_g000001 Rmu_sc0012363.1_g000001 Rmu_sc0024207.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00405040 Rroxscaffold_7G00175990 |
| rosa_rugosa | Rorug06G0220200 |
| rosa_samantha | Rh6AG332300 Rh6BG339200 Rh6CG345400 Rh6DG332800 |
| rosa_wichuraiana | Rw6G028860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1328 |
| Acc36I | ACCTGC | 2 cut(s) | 2212, 2815 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3575 |
| AccIII | TCCGGA | 1 cut(s) | 3601 |
| AcoI | YGGCCR | 2 cut(s) | 1813, 2575 |
| AcuI | CTGAAG | 6 cut(s) | 390, 495, 1685, 1947, 2343, 4062 |
| AcyI | GRCGYC | 1 cut(s) | 268 |
| AfaI | GTAC | 8 cut(s) | 639, 1701, 2071, 2127, 2149, 2805, 3627, 3794 |
| AfeI | AGCGCT | 1 cut(s) | 686 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 473, 1012, 1136, 1248, 2315, 3290, 3377, 3575 |
| AflII | CTTAAG | 2 cut(s) | 332, 3080 |
| AflIII | ACRYGT | 1 cut(s) | 671 |
| AhlI | ACTAGT | 1 cut(s) | 1676 |
| AjiI | CACGTC | 1 cut(s) | 772 |
| AjnI | CCWGG | 3 cut(s) | 214, 1815, 3055 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 366, 398 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1110, 1142 |
| Alw21I | GWGCWC | 4 cut(s) | 658, 1144, 1221, 2723 |
| Alw26I | GTCTC | 5 cut(s) | 990, 1491, 1970, 2195, 3211 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 518, 1130, 1646 |
| Aor13HI | TCCGGA | 1 cut(s) | 3601 |
| Aor51HI | AGCGCT | 1 cut(s) | 686 |
| AoxI | GGCC | 8 cut(s) | 113, 1193, 1281, 1813, 2575, 3368, 3677, 3757 |
| AseI | ATTAAT | 1 cut(s) | 1032 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1125 |
| AspLEI | GCGC | 2 cut(s) | 687, 2961 |
| AspS9I | GGNCC | 9 cut(s) | 551, 1580, 1660, 2224, 3369, 3548, 3599, 3757, 4046 |
| AsuC2I | CCSGG | 2 cut(s) | 3756, 4074 |
| AsuII | TTCGAA | 1 cut(s) | 161 |
| AsuNHI | GCTAGC | 2 cut(s) | 529, 1631 |
| AvaII | GGWCC | 7 cut(s) | 551, 1580, 1660, 2224, 3548, 3599, 4046 |
| AxyI | CCTNAGG | 4 cut(s) | 414, 1101, 1131, 1656 |
| BaeGI | GKGCMC | 2 cut(s) | 1655, 2321 |
| BalI | TGGCCA | 1 cut(s) | 1815 |
| BamHI | GGATCC | 2 cut(s) | 1738, 2877 |
| BauI | CACGAG | 2 cut(s) | 1863, 2520 |
| BbsI | GAAGAC | 1 cut(s) | 783 |
| Bbv12I | GWGCWC | 4 cut(s) | 658, 1144, 1221, 2723 |
| BceAI | ACGGC | 4 cut(s) | 26, 104, 1682, 3234 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 866, 900, 1820, 1854, 2501, 2535 |
| BciT130I | CCWGG | 3 cut(s) | 216, 1817, 3057 |
| BclI | TGATCA | 2 cut(s) | 2209, 3316 |
| BcnI | CCSGG | 2 cut(s) | 3756, 4074 |
| BcoDI | GTCTC | 5 cut(s) | 990, 1491, 1970, 2195, 3211 |
| BcuI | ACTAGT | 1 cut(s) | 1676 |
| BfaI | CTAG | 7 cut(s) | 351, 468, 530, 1371, 1632, 1677, 4099 |
| BfmI | CTRYAG | 2 cut(s) | 1932, 2298 |
| BfoI | RGCGCY | 2 cut(s) | 688, 2962 |
| BfrI | CTTAAG | 2 cut(s) | 332, 3080 |
| BfuAI | ACCTGC | 2 cut(s) | 2212, 2815 |
| BglII | AGATCT | 1 cut(s) | 3803 |
| BlpI | GCTNAGC | 3 cut(s) | 1422, 1550, 2962 |
| Bme1390I | CCNGG | 5 cut(s) | 216, 1817, 3057, 3756, 4074 |
| Bme18I | GGWCC | 7 cut(s) | 551, 1580, 1660, 2224, 3548, 3599, 4046 |
| BmgBI | CACGTC | 1 cut(s) | 772 |
| BmgT120I | GGNCC | 9 cut(s) | 551, 1580, 1660, 2224, 3369, 3548, 3599, 3757, 4046 |
| BmiI | GGNNCC | 7 cut(s) | 6, 952, 1081, 1582, 1740, 2879, 3282 |
| BmrFI | CCNGG | 5 cut(s) | 216, 1817, 3057, 3756, 4074 |
| BmtI | GCTAGC | 2 cut(s) | 533, 1635 |
| BpiI | GAAGAC | 1 cut(s) | 783 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1769, 1801, 2269, 2301, 2305, 2337 |
| BpmI | CTGGAG | 4 cut(s) | 1158, 2832, 3032, 4038 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1911 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1422, 1550, 2962 |
| Bpu14I | TTCGAA | 1 cut(s) | 161 |
| BpuMI | CCSGG | 2 cut(s) | 3756, 4074 |
| BsaAI | YACGTR | 2 cut(s) | 557, 1145 |
| BsaHI | GRCGYC | 1 cut(s) | 268 |
| BsaJI | CCNNGG | 8 cut(s) | 120, 865, 1317, 1461, 1734, 3055, 3216, 3287 |
| BsaWI | WCCGGW | 2 cut(s) | 3601, 3978 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1110, 1140, 2648, 2678, 3101, 3131 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 473, 1012, 1136, 1248, 2315, 3290, 3377, 3575 |
| Bse1I | ACTGG | 6 cut(s) | 677, 1083, 2419, 2749, 3960, 4055 |
| Bse21I | CCTNAGG | 4 cut(s) | 414, 1101, 1131, 1656 |
| Bse3DI | GCAATG | 2 cut(s) | 940, 3074 |
| BseAI | TCCGGA | 1 cut(s) | 3601 |
| BseBI | CCWGG | 3 cut(s) | 216, 1817, 3057 |
| BseDI | CCNNGG | 8 cut(s) | 120, 865, 1317, 1461, 1734, 3055, 3216, 3287 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 473, 1012, 1136, 1248, 2315, 3290, 3377, 3575 |
| BseMI | GCAATG | 2 cut(s) | 940, 3074 |
| BseNI | ACTGG | 6 cut(s) | 677, 1083, 2419, 2749, 3960, 4055 |
| BseRI | GAGGAG | 5 cut(s) | 254, 2692, 3104, 3699, 3984 |
| BseSI | GKGCMC | 2 cut(s) | 1655, 2321 |
| BsgI | GTGCAG | 2 cut(s) | 597, 3289 |
| BshFI | GGCC | 8 cut(s) | 115, 1195, 1283, 1815, 2577, 3370, 3679, 3759 |
| BsiHKAI | GWGCWC | 4 cut(s) | 658, 1144, 1221, 2723 |
| BsiSI | CCGG | 4 cut(s) | 3602, 3755, 3979, 4073 |
| BslFI | GGGAC | 3 cut(s) | 1448, 2499, 3794 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 473, 1012, 1136, 1248, 2315, 3290, 3377, 3575 |
| BsmAI | GTCTC | 5 cut(s) | 990, 1491, 1970, 2195, 3211 |
| BsmFI | GGGAC | 3 cut(s) | 1448, 2499, 3794 |
| BsmI | GAATGC | 1 cut(s) | 4036 |
| BsnI | GGCC | 8 cut(s) | 115, 1195, 1283, 1815, 2577, 3370, 3679, 3759 |
| Bsp119I | TTCGAA | 1 cut(s) | 161 |
| Bsp1286I | GDGCHC | 6 cut(s) | 658, 1144, 1221, 1655, 2321, 2723 |
| Bsp13I | TCCGGA | 1 cut(s) | 3601 |
| Bsp1407I | TGTACA | 1 cut(s) | 3625 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1422, 1550, 2962 |
| Bsp19I | CCATGG | 2 cut(s) | 865, 1734 |
| BspANI | GGCC | 8 cut(s) | 115, 1195, 1283, 1815, 2577, 3370, 3679, 3759 |
| BspEI | TCCGGA | 1 cut(s) | 3601 |
| BspHI | TCATGA | 5 cut(s) | 1174, 1276, 1375, 1474, 3841 |
| BspLI | GGNNCC | 7 cut(s) | 6, 952, 1081, 1582, 1740, 2879, 3282 |
| BspMAI | CTGCAG | 1 cut(s) | 2302 |
| BspMI | ACCTGC | 2 cut(s) | 2212, 2815 |
| BspOI | GCTAGC | 2 cut(s) | 533, 1635 |
| BspT104I | TTCGAA | 1 cut(s) | 161 |
| BspTI | CTTAAG | 2 cut(s) | 332, 3080 |
| BsrDI | GCAATG | 2 cut(s) | 940, 3074 |
| BsrGI | TGTACA | 1 cut(s) | 3625 |
| BsrI | ACTGG | 6 cut(s) | 677, 1083, 2419, 2749, 3960, 4055 |
| BssECI | CCNNGG | 8 cut(s) | 120, 865, 1317, 1461, 1734, 3055, 3216, 3287 |
| BssNI | GRCGYC | 1 cut(s) | 268 |
| BssSI | CACGAG | 2 cut(s) | 1863, 2520 |
| BssT1I | CCWWGG | 4 cut(s) | 865, 1317, 1734, 3287 |
| Bst2BI | CACGAG | 2 cut(s) | 1863, 2520 |
| Bst2UI | CCWGG | 3 cut(s) | 216, 1817, 3057 |
| Bst6I | CTCTTC | 3 cut(s) | 1049, 1197, 2451 |
| BstACI | GRCGYC | 1 cut(s) | 268 |
| BstAFI | CTTAAG | 2 cut(s) | 332, 3080 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1769 |
| BstAUI | TGTACA | 1 cut(s) | 3625 |
| BstBAI | YACGTR | 2 cut(s) | 557, 1145 |
| BstBI | TTCGAA | 1 cut(s) | 161 |
| BstDSI | CCRYGG | 5 cut(s) | 120, 865, 1461, 1734, 3216 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1010 |
| BstH2I | RGCGCY | 2 cut(s) | 688, 2962 |
| BstHHI | GCGC | 2 cut(s) | 687, 2961 |
| BstMAI | GTCTC | 5 cut(s) | 990, 1491, 1970, 2195, 3211 |
| BstNI | CCWGG | 3 cut(s) | 216, 1817, 3057 |
| BstNSI | RCATGY | 5 cut(s) | 675, 1990, 2008, 3070, 3869 |
| BstSCI | CCNGG | 5 cut(s) | 214, 1815, 3055, 3754, 4072 |
| BstSFI | CTRYAG | 2 cut(s) | 1932, 2298 |
| BstSLI | GKGCMC | 2 cut(s) | 1655, 2321 |
| BstV2I | GAAGAC | 1 cut(s) | 783 |
| BstX2I | RGATCY | 4 cut(s) | 1738, 2877, 3803, 4069 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3056 |
| BstYI | RGATCY | 4 cut(s) | 1738, 2877, 3803, 4069 |
| Bsu36I | CCTNAGG | 4 cut(s) | 414, 1101, 1131, 1656 |
| BsuRI | GGCC | 8 cut(s) | 115, 1195, 1283, 1815, 2577, 3370, 3679, 3759 |
| BtgI | CCRYGG | 5 cut(s) | 120, 865, 1461, 1734, 3216 |
| BtgZI | GCGATG | 2 cut(s) | 234, 762 |
| BtrI | CACGTC | 1 cut(s) | 772 |
| BtsI | GCAGTG | 2 cut(s) | 3142, 3416 |
| BveI | ACCTGC | 2 cut(s) | 2212, 2815 |
| CaiI | CAGNNNCTG | 3 cut(s) | 518, 1130, 1646 |
| CciI | TCATGA | 5 cut(s) | 1174, 1276, 1375, 1474, 3841 |
| CfoI | GCGC | 2 cut(s) | 687, 2961 |
| Cfr13I | GGNCC | 9 cut(s) | 551, 1580, 1660, 2224, 3369, 3548, 3599, 3757, 4046 |
| CseI | GACGC | 3 cut(s) | 276, 2171, 3791 |
| Csp6I | GTAC | 8 cut(s) | 638, 1700, 2070, 2126, 2148, 2804, 3626, 3793 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2374, 2409 |
| CviQI | GTAC | 8 cut(s) | 638, 1700, 2070, 2126, 2148, 2804, 3626, 3793 |
| DraI | TTTAAA | 2 cut(s) | 858, 2673 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1328 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1328 |
| EaeI | YGGCCR | 2 cut(s) | 1813, 2575 |
| Eam1104I | CTCTTC | 3 cut(s) | 1049, 1197, 2451 |
| EarI | CTCTTC | 3 cut(s) | 1049, 1197, 2451 |
| EciI | GGCGGA | 2 cut(s) | 1316, 3273 |
| Eco130I | CCWWGG | 4 cut(s) | 865, 1317, 1734, 3287 |
| Eco147I | AGGCCT | 2 cut(s) | 1195, 3679 |
| Eco32I | GATATC | 4 cut(s) | 1363, 3518, 3899, 3929 |
| Eco47I | GGWCC | 7 cut(s) | 551, 1580, 1660, 2224, 3548, 3599, 4046 |
| Eco47III | AGCGCT | 1 cut(s) | 686 |
| Eco57I | CTGAAG | 6 cut(s) | 390, 495, 1685, 1947, 2343, 4062 |
| Eco81I | CCTNAGG | 4 cut(s) | 414, 1101, 1131, 1656 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1010 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1660, 4046 |
| EcoRI | GAATTC | 1 cut(s) | 457 |
| EcoRII | CCWGG | 3 cut(s) | 214, 1815, 3055 |
| EcoRV | GATATC | 4 cut(s) | 1363, 3518, 3899, 3929 |
| EcoT14I | CCWWGG | 4 cut(s) | 865, 1317, 1734, 3287 |
| EcoT22I | ATGCAT | 2 cut(s) | 151, 3591 |
| ErhI | CCWWGG | 4 cut(s) | 865, 1317, 1734, 3287 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 366, 398, 1783, 1815 |
| FaqI | GGGAC | 3 cut(s) | 1448, 2499, 3794 |
| FauI | CCCGC | 2 cut(s) | 3079, 3573 |
| FauNDI | CATATG | 1 cut(s) | 3396 |
| FbaI | TGATCA | 2 cut(s) | 2209, 3316 |
| FspBI | CTAG | 7 cut(s) | 351, 468, 530, 1371, 1632, 1677, 4099 |
| GlaI | GCGC | 2 cut(s) | 686, 2960 |
| GsuI | CTGGAG | 4 cut(s) | 1158, 2832, 3032, 4038 |
| HaeII | RGCGCY | 2 cut(s) | 688, 2962 |
| HaeIII | GGCC | 8 cut(s) | 115, 1195, 1283, 1815, 2577, 3370, 3679, 3759 |
| HapII | CCGG | 4 cut(s) | 3602, 3755, 3979, 4073 |
| HgaI | GACGC | 3 cut(s) | 276, 2171, 3791 |
| HhaI | GCGC | 2 cut(s) | 687, 2961 |
| Hin1I | GRCGYC | 1 cut(s) | 268 |
| Hin6I | GCGC | 2 cut(s) | 685, 2959 |
| HinP1I | GCGC | 2 cut(s) | 685, 2959 |
| HindIII | AAGCTT | 3 cut(s) | 329, 719, 2858 |
| HpaII | CCGG | 4 cut(s) | 3602, 3755, 3979, 4073 |
| Hpy166II | GTNNAC | 8 cut(s) | 178, 551, 755, 1185, 2002, 2148, 2686, 3626 |
| Hpy8I | GTNNAC | 8 cut(s) | 178, 551, 755, 1185, 2002, 2148, 2686, 3626 |
| HpyCH4IV | ACGT | 6 cut(s) | 556, 771, 1075, 1144, 3525, 3762 |
| HpySE526I | ACGT | 6 cut(s) | 556, 771, 1075, 1144, 3525, 3762 |
| Hsp92I | GRCGYC | 1 cut(s) | 268 |
| HspAI | GCGC | 2 cut(s) | 685, 2959 |
| Kpn2I | TCCGGA | 1 cut(s) | 3601 |
| Ksp22I | TGATCA | 2 cut(s) | 2209, 3316 |
| MaeI | CTAG | 7 cut(s) | 351, 468, 530, 1371, 1632, 1677, 4099 |
| MaeII | ACGT | 6 cut(s) | 556, 771, 1075, 1144, 3525, 3762 |
| MfeI | CAATTG | 1 cut(s) | 3343 |
| MflI | RGATCY | 4 cut(s) | 1738, 2877, 3803, 4069 |
| MhlI | GDGCHC | 6 cut(s) | 658, 1144, 1221, 1655, 2321, 2723 |
| MlsI | TGGCCA | 1 cut(s) | 1815 |
| MluNI | TGGCCA | 1 cut(s) | 1815 |
| MlyI | GAGTC | 9 cut(s) | 1254, 1691, 2672, 3098, 3116, 3134, 3170, 3191, 3614 |
| MmeI | TCCRAC | 4 cut(s) | 455, 2435, 2964, 4039 |
| Mox20I | TGGCCA | 1 cut(s) | 1815 |
| Mph1103I | ATGCAT | 2 cut(s) | 151, 3591 |
| MroI | TCCGGA | 1 cut(s) | 3601 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1125 |
| MscI | TGGCCA | 1 cut(s) | 1815 |
| MslI | CAYNNNNRTG | 1 cut(s) | 870 |
| Msp20I | TGGCCA | 1 cut(s) | 1815 |
| MspA1I | CMGCKG | 3 cut(s) | 515, 1577, 1613 |
| MspCI | CTTAAG | 2 cut(s) | 332, 3080 |
| MspI | CCGG | 4 cut(s) | 3602, 3755, 3979, 4073 |
| MspR9I | CCNGG | 5 cut(s) | 216, 1817, 3057, 3756, 4074 |
| MunI | CAATTG | 1 cut(s) | 3343 |
| Mva1269I | GAATGC | 1 cut(s) | 4036 |
| MvaI | CCWGG | 3 cut(s) | 216, 1817, 3057 |
| NciI | CCSGG | 2 cut(s) | 3756, 4074 |
| NcoI | CCATGG | 2 cut(s) | 865, 1734 |
| NdeI | CATATG | 1 cut(s) | 3396 |
| NheI | GCTAGC | 2 cut(s) | 529, 1631 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 952, 1081, 1582, 1740, 2879, 3282 |
| NmeAIII | GCCGAG | 2 cut(s) | 2603, 2935 |
| NmuCI | GTSAC | 8 cut(s) | 569, 872, 2900, 3101, 3119, 3137, 3166, 4094 |
| NsiI | ATGCAT | 2 cut(s) | 151, 3591 |
| NspI | RCATGY | 5 cut(s) | 675, 1990, 2008, 3070, 3869 |
| NspV | TTCGAA | 1 cut(s) | 161 |
| PaeI | GCATGC | 2 cut(s) | 3070, 3869 |
| PagI | TCATGA | 5 cut(s) | 1174, 1276, 1375, 1474, 3841 |
| PceI | AGGCCT | 2 cut(s) | 1195, 3679 |
| PciI | ACATGT | 1 cut(s) | 671 |
| PctI | GAATGC | 1 cut(s) | 4036 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1125 |
| PflFI | GACNNNGTC | 1 cut(s) | 1439 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3575 |
| PfoI | TCCNGGA | 1 cut(s) | 4072 |
| PleI | GAGTC | 9 cut(s) | 1253, 1690, 2671, 3098, 3116, 3134, 3169, 3190, 3613 |
| PpsI | GAGTC | 9 cut(s) | 1253, 1690, 2671, 3098, 3116, 3134, 3169, 3190, 3613 |
| Ppu21I | YACGTR | 2 cut(s) | 557, 1145 |
| PpuMI | RGGWCCY | 2 cut(s) | 1660, 4046 |
| PscI | ACATGT | 1 cut(s) | 671 |
| PshBI | ATTAAT | 1 cut(s) | 1032 |
| Psp5II | RGGWCCY | 2 cut(s) | 1660, 4046 |
| Psp6I | CCWGG | 3 cut(s) | 214, 1815, 3055 |
| PspGI | CCWGG | 3 cut(s) | 214, 1815, 3055 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 952, 1081, 1582, 1740, 2879, 3282 |
| PspPI | GGNCC | 9 cut(s) | 551, 1580, 1660, 2224, 3369, 3548, 3599, 3757, 4046 |
| PspPPI | RGGWCCY | 2 cut(s) | 1660, 4046 |
| PstI | CTGCAG | 1 cut(s) | 2302 |
| PstNI | CAGNNNCTG | 3 cut(s) | 518, 1130, 1646 |
| PsuI | RGATCY | 4 cut(s) | 1738, 2877, 3803, 4069 |
| PsyI | GACNNNGTC | 1 cut(s) | 1439 |
| PvuII | CAGCTG | 3 cut(s) | 515, 1577, 1613 |
| RsaI | GTAC | 8 cut(s) | 639, 1701, 2071, 2127, 2149, 2805, 3627, 3794 |
| RsaNI | GTAC | 8 cut(s) | 638, 1700, 2070, 2126, 2148, 2804, 3626, 3793 |
| RseI | CAYNNNNRTG | 1 cut(s) | 870 |
| Sau96I | GGNCC | 9 cut(s) | 551, 1580, 1660, 2224, 3369, 3548, 3599, 3757, 4046 |
| SchI | GAGTC | 9 cut(s) | 1254, 1691, 2672, 3098, 3116, 3134, 3170, 3191, 3614 |
| ScrFI | CCNGG | 5 cut(s) | 216, 1817, 3057, 3756, 4074 |
| SduI | GDGCHC | 6 cut(s) | 658, 1144, 1221, 1655, 2321, 2723 |
| SfcI | CTRYAG | 2 cut(s) | 1932, 2298 |
| SfuI | TTCGAA | 1 cut(s) | 161 |
| SinI | GGWCC | 7 cut(s) | 551, 1580, 1660, 2224, 3548, 3599, 4046 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 870 |
| SmlI | CTYRAG | 2 cut(s) | 332, 3080 |
| SmoI | CTYRAG | 2 cut(s) | 332, 3080 |
| SpeI | ACTAGT | 1 cut(s) | 1676 |
| SphI | GCATGC | 2 cut(s) | 3070, 3869 |
| SseBI | AGGCCT | 2 cut(s) | 1195, 3679 |
| SspI | AATATT | 1 cut(s) | 2407 |
| SspMI | CTAG | 7 cut(s) | 351, 468, 530, 1371, 1632, 1677, 4099 |
| StuI | AGGCCT | 2 cut(s) | 1195, 3679 |
| StyD4I | CCNGG | 5 cut(s) | 214, 1815, 3055, 3754, 4072 |
| StyI | CCWWGG | 4 cut(s) | 865, 1317, 1734, 3287 |
| TaiI | ACGT | 6 cut(s) | 559, 774, 1078, 1147, 3528, 3765 |
| TatI | WGTACW | 2 cut(s) | 2069, 3625 |
| TauI | GCSGC | 4 cut(s) | 15, 41, 2798, 4036 |
| TseFI | GTSAC | 8 cut(s) | 569, 872, 2900, 3101, 3119, 3137, 3166, 4094 |
| Tsp45I | GTSAC | 8 cut(s) | 569, 872, 2900, 3101, 3119, 3137, 3166, 4094 |
| TspGWI | ACGGA | 2 cut(s) | 795, 2890 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1439 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3575 |
| Vha464I | CTTAAG | 2 cut(s) | 332, 3080 |
| VpaK11BI | GGWCC | 7 cut(s) | 551, 1580, 1660, 2224, 3548, 3599, 4046 |
| VspI | ATTAAT | 1 cut(s) | 1032 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1010 |
| XceI | RCATGY | 5 cut(s) | 675, 1990, 2008, 3070, 3869 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1324 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1125 |
| XspI | CTAG | 7 cut(s) | 351, 468, 530, 1371, 1632, 1677, 4099 |
| Zsp2I | ATGCAT | 2 cut(s) | 151, 3591 |