Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012363.1

Orthogroup ID

OG0005320

Physical Location & Seq

Genomic Coordinates Reverse (-)

432 .. 4743

Gene Structure 4312 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012363.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3087 bp

atgcagactgatggtggaaatatgaatggaaatttatccaaggaagatggagatgaacatctgccattggtgaaacgagccagggttcgaatgaataaaccatcttctgttgaggaagttgatagctcttcgcacattcaagaaagtctgaaggaagtcatgctcaatccatcagggctgatcaatacctctccagtatgtgatgacaattgccctggtggtagggactcatttgtggtaaatggagctctaagtgatattacaccttcaagagtttgcactcaaagtttggagaataggcctcagctttggaactcgaagaaggaccagtcttttggttgttcggctgatggtgaagctgttttacctccatctaagcgtcttcatcgtgctctagaagccatgtcagctaatgcagctgaagatgatgaaagatgtaactatgattcatcagccatgaggacatctgctattgattgtcataattcttgcatgaacacatgcgttactataactgtggaaagtaattcagggaatggtctgggtctgcatagtgatgactcttttggcaataatgcttcagggttctctaccagtccaaaccgtgtaatcttggagcaaaatactaaatcagcaatggaagtggatgtatgtgatcaaagaaggaatagtcctgataatcagaataatcagtgttccgttaatggtttcatagattctgggcaccatgttggtggtaaaattctttgtgctggttctgctggctgttgcactattgggactgcagttcagactgaaagtccagggaatttatcacatagtatggagagaagagaggctggtattggatttaatcaaggttcaatagatgagtttcctcggaaagatgaagttcatgcaataattgaatcaagcaataaagatgcagaaaatcctgatactgattgtgatactttagagcatactctgaagagtttagatcctgtactaggcaccagccatggatttgttgaagttccacgtcaaattaatgctagtccacctcactgtggtgcaaaggaccctagggaggacatcaattctctggagcctgagctgcaagagaacagagatgtaaaagacgtaatggatgctgtaaaagaggtcaagcataaacaaatagagaagggtcctagttcagtttctgatccaactgagtacttgactgaaaaacatgttgctggtgtgcggtcaagtccgtctctaacagatggtggagattctcttgcacaagcatcacctcctaatacttcaggctgtcgtatttctacttctgatagtagtaatattcttcagaacaatggcagttgtagtcctgatgttgatatgcacaagagaacatctactccagttgatgaggatgaaaactcagaagcagtggtttgtcaaagaccaaaatctgtgagcaggtatgcagaagcacttgctgctctgtcatcctttgagacaatgctaggaaccttgacaaggaccaaggacagtattggtcgagcaactcgtgtagctatcgactgtggaaagattggtgtagcttctaaggcgttggaaattctggcacgtcatttggaaaatgagtcgagcttacaccggagaatcgatttatttttcctggtcgattcaattgctcagcattctcgaggtttgaaaggtgatactggtggtatgtacaattctgcaatccaagcagtactaccacggttattgtccgctgctgctcctcctggaagttcagcgaatgagaatcgtaggcagtgtctaaaggttttgaaactttggttggagagaaggattgttcctgagtccataattcgtcgccatatgcgagaacttgattctctgggtgggtcttctgctggtgcttattgtcggcgctcctcgagaacagaaaggtctttggatgatcctcttagagagatggagggtatgcttgtcgatgaatacggaagtaattcaagttttcaacttccgggattttgtatgccccgcatgctcaaggatgaagacggtggaagtgattctgatggggagagttttgaggctgtcacccctgaacataatcctcagactaatgaagaacatgaagccacacccgcaaccgaaaggcataggcatatcttggaagatgttgatggagaacttgaaatggaggatgtggctccgtcgtgtgatgttgacatgagttcatcttgcagtgttgctggagtcaatgtcgtgcaggcttcacataatcagtttgaacaacattttccacatccctttgcccctccgctacctcaagatgtgccaccgtcatctcctcctctaccatcgtctcctccgcccccaccgccaccagcacctctaccccctcctcatgtcattcaccctccatgtgctacttctgatttaaatccatacactgattcacataatgtgcatgacagcagagttccacctccgcctcagcagttgaatggaccaagaattaaccaagcaattcctgatgcagtgcactatcatgcccccgagtctagagatcttcacaggcagatgcctgattctacttcctgctcttatagtagtttcccttccaattcaggcagaaatattccacaaactgatggggctgccttccataacaaaggttaccctttacggccacctcatgctccaccgtcgaatcagttttcttatgttaaaggagaccatcatgtaaagccacggcgtgaagttccgcctccttatcacaacaggtttgacttcatgcagcatggggaccgagaacactactacaataatcatgaaagaatgaaaccagctccttatgatccccgtgagagctggaggtttccctcacattcgtattctggtcctcgctatcctgaaaaaggcaaggcgtcttatgggaatgctccatttgctggcccccctcgtgaaccaacaagattacctggccaagggtggagatttcctccacggtcagcaagccacagacactcttatataccgccttatgatggttcaatacccgtcaccagcagaggtccaggattttggcggcctagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CTD_bind GSHPx PWWP

Protein Analysis

1028

Amino Acids

112.36

Weight (kDa)

5.67

Isoelectric Point (pI)

61.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48160 AT2G48160 AT3G63070
fragaria_vesca	FvH4_2g23910 FvH4_2g23910 FvH4_2g23910
malus_domestica	MD03G1268600.v1.1 MD11G1289400.v1.1
prunus_persica	Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1
pyrus_communis	pycom11g25680
rosa_chinensis	RchiOBHm_Chr6g0291521 RchiOBHm_Chr6g0291531
rosa_laevigata	RLG00000012109
rosa_multiflora	Rmu_co8000626.1_g000001 Rmu_co8259725.1_g000001 Rmu_co8294861.1_g000001 Rmu_sc0012363.1_g000001 Rmu_sc0024207.1_g000004
rosa_roxburghii	Rroxscaffold_6G00405040 Rroxscaffold_7G00175990
rosa_rugosa	Rorug06G0220200
rosa_samantha	Rh6AG332300 Rh6BG339200 Rh6CG345400 Rh6DG332800
rosa_wichuraiana	Rw6G028860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1437
AccB1I	GGYRCC	2 cut(s)	723, 992
AccB7I	CCANNNNNTGG	1 cut(s)	2939
AclWI	GGATC	4 cut(s)	974, 1181, 1934, 2840
AcoI	YGGCCR	2 cut(s)	2675, 2971
AcsI	RAATTY	4 cut(s)	31, 741, 808, 1587
AcuI	CTGAAG	6 cut(s)	170, 441, 564, 989, 1275, 1316
AcyI	GRCGYC	1 cut(s)	2915
AdeI	CACNNNGTG	1 cut(s)	2744
AfaI	GTAC	4 cut(s)	987, 1199, 1706, 1728
AfiI	CCNNNNNNNGG	8 cut(s)	989, 1049, 1069, 1506, 2906, 2939, 2975, 3035
AflIII	ACRYGT	1 cut(s)	1213
AhdI	GACNNNNNGTC	1 cut(s)	798
AjiI	CACGTC	2 cut(s)	1022, 1598
AjnI	CCWGG	7 cut(s)	80, 214, 802, 1647, 1759, 2968, 3064
AjuI	GAANNNNNNNTTGG	2 cut(s)	1799, 1831
AleI	CACNNNNGTG	1 cut(s)	1050
AloI	GAACNNNNNNTCC	2 cut(s)	1369, 1401
Alw21I	GWGCWC	3 cut(s)	250, 394, 2532
Alw26I	GTCTC	4 cut(s)	1245, 1478, 2355, 2715
Alw44I	GTGCAC	1 cut(s)	2528
AlwI	GGATC	4 cut(s)	974, 1181, 1934, 2840
AlwNI	CAGNNNCTG	1 cut(s)	1184
Ama87I	CYCGRG	3 cut(s)	1674, 1915, 2543
AoxI	GGCC	5 cut(s)	299, 2675, 2941, 2971, 3077
ApaLI	GTGCAC	1 cut(s)	2528
ApeKI	GCWGC	7 cut(s)	416, 1096, 1466, 1748, 1751, 2645, 2785
ApoI	RAATTY	4 cut(s)	31, 741, 808, 1587
ArsI	GACNNNNNNTTYG	2 cut(s)	317, 349
AseI	ATTAAT	1 cut(s)	1029
Asp700I	GAANNNNTTC	2 cut(s)	1987, 2053
AspA2I	CCTAGG	1 cut(s)	1064
AspLEI	GCGC	1 cut(s)	1911
AspS9I	GGNCC	9 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 2942, 3062
AsuC2I	CCSGG	1 cut(s)	2007
AsuHPI	GGTGA	7 cut(s)	82, 365, 1269, 1700, 2074, 2393, 3043
AsuII	TTCGAA	1 cut(s)	88
AvaI	CYCGRG	3 cut(s)	1674, 1915, 2543
AvaII	GGWCC	8 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 3062
AvrII	CCTAGG	1 cut(s)	1064
BaeGI	GKGCMC	2 cut(s)	726, 2532
BalI	TGGCCA	1 cut(s)	2973
BanI	GGYRCC	2 cut(s)	723, 992
BanII	GRGCYC	1 cut(s)	250
BarI	GAAGNNNNNNTAC	6 cut(s)	348, 380, 1294, 1326, 2590, 2622
BauI	CACGAG	2 cut(s)	1536, 2949
BbsI	GAAGAC	3 cut(s)	374, 1878, 2046
Bbv12I	GWGCWC	3 cut(s)	250, 394, 2532
BbvCI	CCTCAGC	2 cut(s)	303, 2481
BbvI	GCAGC	7 cut(s)	428, 1083, 1453, 1735, 1738, 2632, 2797
BceAI	ACGGC	2 cut(s)	2690, 2756
BcgI	CGANNNNNNTGC	2 cut(s)	1643, 1677
BciT130I	CCWGG	7 cut(s)	82, 216, 804, 1649, 1761, 2970, 3066
BclI	TGATCA	2 cut(s)	180, 655
BcnI	CCSGG	1 cut(s)	2007
BcoDI	GTCTC	4 cut(s)	1245, 1478, 2355, 2715
BfaI	CTAG	8 cut(s)	395, 989, 1035, 1065, 1173, 1493, 2550, 3081
BfmI	CTRYAG	1 cut(s)	783
BfoI	RGCGCY	1 cut(s)	1912
BfuAI	ACCTGC	1 cut(s)	1437
BglII	AGATCT	1 cut(s)	2554
BisI	GCNGC	8 cut(s)	417, 1097, 1467, 1749, 1752, 2646, 2786, 3077
BlnI	CCTAGG	1 cut(s)	1064
BlpI	GCTNAGC	1 cut(s)	1665
BlsI	GCNGC	8 cut(s)	418, 1098, 1468, 1750, 1753, 2647, 2787, 3078
BmcAI	AGTACT	2 cut(s)	1199, 1728
Bme1390I	CCNGG	8 cut(s)	82, 216, 804, 1649, 1761, 2007, 2970, 3066
Bme18I	GGWCC	8 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 3062
BmeRI	GACNNNNNGTC	1 cut(s)	798
BmeT110I	CYCGRG	3 cut(s)	1674, 1915, 2543
BmgBI	CACGTC	2 cut(s)	1022, 1598
BmgT120I	GGNCC	9 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 2942, 3062
BmiI	GGNNCC	9 cut(s)	725, 994, 1062, 1089, 1170, 1498, 2196, 2795, 2944
BmrFI	CCNGG	8 cut(s)	82, 216, 804, 1649, 1761, 2007, 2970, 3066
BmsI	GCATC	5 cut(s)	913, 1120, 1283, 2512, 2559
BpiI	GAAGAC	3 cut(s)	374, 1878, 2046
BplI	GAGNNNNNCTC	2 cut(s)	2974, 3006
BpmI	CTGGAG	5 cut(s)	177, 1106, 1371, 2259, 2881
Bpu10I	CCTNAGC	3 cut(s)	303, 1092, 2481
Bpu1102I	GCTNAGC	1 cut(s)	1665
Bpu14I	TTCGAA	1 cut(s)	88
BpuEI	CTTGAG	2 cut(s)	2015, 2298
BpuMI	CCSGG	1 cut(s)	2007
Bsa29I	ATCGAT	1 cut(s)	1635
BsaBI	GATNNNNATC	2 cut(s)	57, 2427
BsaHI	GRCGYC	1 cut(s)	2915
BsaI	GGTCTC	1 cut(s)	2715
BsaWI	WCCGGW	1 cut(s)	1626
BsaXI	ACNNNNNCTCC	4 cut(s)	1369, 1399, 2232, 2262
Bsc4I	CCNNNNNNNGG	8 cut(s)	989, 1049, 1069, 1506, 2906, 2939, 2975, 3035
Bse1I	ACTGG	5 cut(s)	194, 328, 594, 1388, 1699
Bse3DI	GCAATG	1 cut(s)	642
Bse8I	GATNNNNATC	2 cut(s)	57, 2427
BseBI	CCWGG	7 cut(s)	82, 216, 804, 1649, 1761, 2970, 3066
BseCI	ATCGAT	1 cut(s)	1635
BseGI	GGATG	8 cut(s)	652, 1135, 1405, 1475, 1942, 2041, 2194, 2290
BseJI	GATNNNNATC	2 cut(s)	57, 2427
BseLI	CCNNNNNNNGG	8 cut(s)	989, 1049, 1069, 1506, 2906, 2939, 2975, 3035
BseMI	GCAATG	1 cut(s)	642
BseMII	CTCAG	8 cut(s)	317, 1083, 1185, 1422, 1679, 1827, 2114, 2495
BseNI	ACTGG	5 cut(s)	194, 328, 594, 1388, 1699
BseRI	GAGGAG	6 cut(s)	1746, 1903, 2325, 2328, 2343, 2379
BseSI	GKGCMC	2 cut(s)	726, 2532
BseXI	GCAGC	7 cut(s)	428, 1083, 1453, 1735, 1738, 2632, 2797
BsgI	GTGCAG	1 cut(s)	2273
BshFI	GGCC	5 cut(s)	301, 2677, 2943, 2973, 3079
BshNI	GGYRCC	2 cut(s)	723, 992
BshVI	ATCGAT	1 cut(s)	1635
BsiHKAI	GWGCWC	3 cut(s)	250, 394, 2532
BsiHKCI	CYCGRG	3 cut(s)	1674, 1915, 2543
BsiSI	CCGG	2 cut(s)	1627, 2006
BslFI	GGGAC	3 cut(s)	239, 793, 2807
BslI	CCNNNNNNNGG	8 cut(s)	989, 1049, 1069, 1506, 2906, 2939, 2975, 3035
BsmAI	GTCTC	4 cut(s)	1245, 1478, 2355, 2715
BsmBI	CGTCTC	2 cut(s)	1245, 2355
BsmFI	GGGAC	3 cut(s)	239, 793, 2807
BsmI	GAATGC	2 cut(s)	1669, 2932
BsnI	GGCC	5 cut(s)	301, 2677, 2943, 2973, 3079
Bso31I	GGTCTC	1 cut(s)	2715
BsoBI	CYCGRG	3 cut(s)	1674, 1915, 2543
Bsp119I	TTCGAA	1 cut(s)	88
Bsp1286I	GDGCHC	4 cut(s)	250, 394, 726, 2532
Bsp1407I	TGTACA	1 cut(s)	1704
Bsp143I	GATC	7 cut(s)	180, 655, 979, 1186, 1939, 2554, 2845
Bsp1720I	GCTNAGC	1 cut(s)	1665
Bsp19I	CCATGG	1 cut(s)	1000
BspANI	GGCC	5 cut(s)	301, 2677, 2943, 2973, 3079
BspCNI	CTCAG	8 cut(s)	316, 1084, 1186, 1421, 1678, 1828, 2113, 2494
BspDI	ATCGAT	1 cut(s)	1635
BspHI	TCATGA	1 cut(s)	2818
BspLI	GGNNCC	9 cut(s)	725, 994, 1062, 1089, 1170, 1498, 2196, 2795, 2944
BspMAI	CTGCAG	1 cut(s)	787
BspMI	ACCTGC	1 cut(s)	1437
BspPI	GGATC	4 cut(s)	974, 1181, 1934, 2840
BspQI	GCTCTTC	1 cut(s)	133
BspT104I	TTCGAA	1 cut(s)	88
BspT107I	GGYRCC	2 cut(s)	723, 992
BspTNI	GGTCTC	1 cut(s)	2715
BsrDI	GCAATG	1 cut(s)	642
BsrGI	TGTACA	1 cut(s)	1704
BsrI	ACTGG	5 cut(s)	194, 328, 594, 1388, 1699
BssMI	GATC	7 cut(s)	180, 655, 979, 1186, 1939, 2554, 2845
BssNI	GRCGYC	1 cut(s)	2915
BssSI	CACGAG	2 cut(s)	1536, 2949
BssT1I	CCWWGG	5 cut(s)	39, 1000, 1064, 1512, 2974
Bst2BI	CACGAG	2 cut(s)	1536, 2949
Bst2UI	CCWGG	7 cut(s)	82, 216, 804, 1649, 1761, 2970, 3066
Bst6I	CTCTTC	3 cut(s)	133, 826, 965
BstACI	GRCGYC	1 cut(s)	2915
BstAPI	GCANNNNNTGC	1 cut(s)	1466
BstAUI	TGTACA	1 cut(s)	1704
BstBI	TTCGAA	1 cut(s)	88
BstC8I	GCNNGC	5 cut(s)	763, 2027, 2256, 2941, 3004
BstDSI	CCRYGG	4 cut(s)	1000, 1733, 2738, 2993
BstEII	GGTNACC	1 cut(s)	2663
BstENI	CCTNNNNNAGG	4 cut(s)	987, 1504, 2904, 2973
BstF5I	GGATG	8 cut(s)	652, 1135, 1405, 1475, 1942, 2041, 2194, 2290
BstH2I	RGCGCY	1 cut(s)	1912
BstHHI	GCGC	1 cut(s)	1911
BstKTI	GATC	7 cut(s)	183, 658, 982, 1189, 1942, 2557, 2848
BstMAI	GTCTC	4 cut(s)	1245, 1478, 2355, 2715
BstMBI	GATC	7 cut(s)	180, 655, 979, 1186, 1939, 2554, 2845
BstNI	CCWGG	7 cut(s)	82, 216, 804, 1649, 1761, 2970, 3066
BstNSI	RCATGY	3 cut(s)	504, 1217, 2029
BstPI	GGTNACC	1 cut(s)	2663
BstSCI	CCNGG	8 cut(s)	80, 214, 802, 1647, 1759, 2005, 2968, 3064
BstSFI	CTRYAG	1 cut(s)	783
BstSLI	GKGCMC	2 cut(s)	726, 2532
BstV1I	GCAGC	7 cut(s)	428, 1083, 1453, 1735, 1738, 2632, 2797
BstV2I	GAAGAC	3 cut(s)	374, 1878, 2046
BstX2I	RGATCY	2 cut(s)	979, 2554
BstXI	CCANNNNNNTGG	3 cut(s)	335, 734, 3072
BstYI	RGATCY	2 cut(s)	979, 2554
Bsu15I	ATCGAT	1 cut(s)	1635
BsuRI	GGCC	5 cut(s)	301, 2677, 2943, 2973, 3079
BsuTUI	ATCGAT	1 cut(s)	1635
BtgI	CCRYGG	4 cut(s)	1000, 1733, 2738, 2993
BtrI	CACGTC	2 cut(s)	1022, 1598
BtsCI	GGATG	8 cut(s)	652, 1135, 1405, 1475, 1942, 2041, 2194, 2290
BtsI	GCAGTG	4 cut(s)	1422, 1796, 2236, 2532
BtsIMutI	CAGTG	7 cut(s)	698, 1045, 1422, 1796, 2236, 2436, 2532
BveI	ACCTGC	1 cut(s)	1437
Cac8I	GCNNGC	5 cut(s)	763, 2027, 2256, 2941, 3004
CaiI	CAGNNNCTG	1 cut(s)	1184
CciI	TCATGA	1 cut(s)	2818
CfoI	GCGC	1 cut(s)	1911
Cfr13I	GGNCC	9 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 2942, 3062
ClaI	ATCGAT	1 cut(s)	1635
CseI	GACGC	2 cut(s)	368, 2904
Csp6I	GTAC	4 cut(s)	986, 1198, 1705, 1727
CspCI	CAANNNNNGTGG	4 cut(s)	624, 659, 1722, 1757
CviQI	GTAC	4 cut(s)	986, 1198, 1705, 1727
DpnI	GATC	7 cut(s)	182, 657, 981, 1188, 1941, 2556, 2847
DpnII	GATC	7 cut(s)	180, 655, 979, 1186, 1939, 2554, 2845
DraI	TTTAAA	1 cut(s)	2427
DraIII	CACNNNGTG	1 cut(s)	2744
DriI	GACNNNNNGTC	1 cut(s)	798
EaeI	YGGCCR	2 cut(s)	2675, 2971
Eam1104I	CTCTTC	3 cut(s)	133, 826, 965
Eam1105I	GACNNNNNGTC	1 cut(s)	798
EarI	CTCTTC	3 cut(s)	133, 826, 965
EciI	GGCGGA	3 cut(s)	2346, 2466, 2742
Ecl136II	GAGCTC	1 cut(s)	248
Eco130I	CCWWGG	5 cut(s)	39, 1000, 1064, 1512, 2974
Eco147I	AGGCCT	1 cut(s)	301
Eco24I	GRGCYC	1 cut(s)	250
Eco31I	GGTCTC	1 cut(s)	2715
Eco47I	GGWCC	8 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 3062
Eco53kI	GAGCTC	1 cut(s)	248
Eco57I	CTGAAG	6 cut(s)	170, 441, 564, 989, 1275, 1316
Eco88I	CYCGRG	3 cut(s)	1674, 1915, 2543
Eco91I	GGTNACC	1 cut(s)	2663
EcoICRI	GAGCTC	1 cut(s)	248
EcoNI	CCTNNNNNAGG	4 cut(s)	987, 1504, 2904, 2973
EcoO109I	RGGNCCY	2 cut(s)	1060, 1169
EcoO65I	GGTNACC	1 cut(s)	2663
EcoRII	CCWGG	7 cut(s)	80, 214, 802, 1647, 1759, 2968, 3064
EcoT14I	CCWWGG	5 cut(s)	39, 1000, 1064, 1512, 2974
EcoT38I	GRGCYC	1 cut(s)	250
ErhI	CCWWGG	5 cut(s)	39, 1000, 1064, 1512, 2974
Esp3I	CGTCTC	2 cut(s)	1245, 2355
FaqI	GGGAC	3 cut(s)	239, 793, 2807
FauI	CCCGC	2 cut(s)	2030, 2137
FauNDI	CATATG	1 cut(s)	1857
FbaI	TGATCA	2 cut(s)	180, 655
Fnu4HI	GCNGC	8 cut(s)	417, 1097, 1467, 1749, 1752, 2646, 2786, 3077
FokI	GGATG	8 cut(s)	659, 1142, 1412, 1462, 1949, 2048, 2201, 2277
FriOI	GRGCYC	1 cut(s)	250
Fsp4HI	GCNGC	8 cut(s)	417, 1097, 1467, 1749, 1752, 2646, 2786, 3077
FspBI	CTAG	8 cut(s)	395, 989, 1035, 1065, 1173, 1493, 2550, 3081
GlaI	GCGC	1 cut(s)	1910
GluI	GCNGC	8 cut(s)	417, 1097, 1467, 1749, 1752, 2646, 2786, 3077
GsuI	CTGGAG	5 cut(s)	177, 1106, 1371, 2259, 2881
HaeII	RGCGCY	1 cut(s)	1912
HaeIII	GGCC	5 cut(s)	301, 2677, 2943, 2973, 3079
HapII	CCGG	2 cut(s)	1627, 2006
HgaI	GACGC	2 cut(s)	368, 2904
HhaI	GCGC	1 cut(s)	1911
Hin1I	GRCGYC	1 cut(s)	2915
Hin6I	GCGC	1 cut(s)	1909
HinP1I	GCGC	1 cut(s)	1909
HincII	GTYRAC	1 cut(s)	2212
HindII	GTYRAC	1 cut(s)	2212
HpaII	CCGG	2 cut(s)	1627, 2006
HphI	GGTGA	7 cut(s)	82, 365, 1269, 1700, 2074, 2393, 3043
Hpy166II	GTNNAC	4 cut(s)	1040, 2212, 2530, 2954
Hpy8I	GTNNAC	4 cut(s)	1040, 2212, 2530, 2954
Hpy99I	CGWCG	3 cut(s)	1854, 2203, 2698
HpyAV	CCTTC	8 cut(s)	145, 276, 316, 657, 1159, 1818, 2616, 2659
HpyCH4IV	ACGT	3 cut(s)	1021, 1122, 1597
HpySE526I	ACGT	3 cut(s)	1021, 1122, 1597
Hsp92I	GRCGYC	1 cut(s)	2915
HspAI	GCGC	1 cut(s)	1909
Ksp22I	TGATCA	2 cut(s)	180, 655
Kzo9I	GATC	7 cut(s)	180, 655, 979, 1186, 1939, 2554, 2845
LguI	GCTCTTC	1 cut(s)	133
LmnI	GCTCC	9 cut(s)	245, 616, 1087, 1759, 1916, 2200, 2692, 2842, 2935
Lsp1109I	GCAGC	7 cut(s)	428, 1083, 1453, 1735, 1738, 2632, 2797
LweI	GCATC	5 cut(s)	913, 1120, 1283, 2512, 2559
MaeI	CTAG	8 cut(s)	395, 989, 1035, 1065, 1173, 1493, 2550, 3081
MaeII	ACGT	3 cut(s)	1021, 1122, 1597
MaeIII	GTNAC	5 cut(s)	437, 505, 2080, 2663, 3049
MalI	GATC	7 cut(s)	182, 657, 981, 1188, 1941, 2556, 2847
MboI	GATC	7 cut(s)	180, 655, 979, 1186, 1939, 2554, 2845
MfeI	CAATTG	2 cut(s)	208, 1659
MflI	RGATCY	2 cut(s)	979, 2554
MhlI	GDGCHC	4 cut(s)	250, 394, 726, 2532
MlsI	TGGCCA	1 cut(s)	2973
MluNI	TGGCCA	1 cut(s)	2973
MlyI	GAGTC	6 cut(s)	221, 554, 1622, 1847, 2250, 2555
MmeI	TCCRAC	3 cut(s)	1214, 1563, 1797
Mox20I	TGGCCA	1 cut(s)	2973
MroXI	GAANNNNTTC	2 cut(s)	1987, 2053
MscI	TGGCCA	1 cut(s)	2973
MseI	TTAA	6 cut(s)	702, 852, 1029, 2426, 2505, 2715
MslI	CAYNNNNRTG	4 cut(s)	555, 732, 1050, 2535
Msp20I	TGGCCA	1 cut(s)	2973
MspA1I	CMGCKG	2 cut(s)	419, 1748
MspI	CCGG	2 cut(s)	1627, 2006
MspR9I	CCNGG	8 cut(s)	82, 216, 804, 1649, 1761, 2007, 2970, 3066
MunI	CAATTG	2 cut(s)	208, 1659
Mva1269I	GAATGC	2 cut(s)	1669, 2932
MvaI	CCWGG	7 cut(s)	82, 216, 804, 1649, 1761, 2970, 3066
NciI	CCSGG	1 cut(s)	2007
NcoI	CCATGG	1 cut(s)	1000
NdeI	CATATG	1 cut(s)	1857
NdeII	GATC	7 cut(s)	180, 655, 979, 1186, 1939, 2554, 2845
NlaIV	GGNNCC	9 cut(s)	725, 994, 1062, 1089, 1170, 1498, 2196, 2795, 2944
NmuCI	GTSAC	2 cut(s)	2080, 3049
NspI	RCATGY	3 cut(s)	504, 1217, 2029
NspV	TTCGAA	1 cut(s)	88
OliI	CACNNNNGTG	1 cut(s)	1050
PaeI	GCATGC	1 cut(s)	2029
PaeR7I	CTCGAG	2 cut(s)	1674, 1915
PagI	TCATGA	1 cut(s)	2818
PceI	AGGCCT	1 cut(s)	301
PciI	ACATGT	1 cut(s)	1213
PciSI	GCTCTTC	1 cut(s)	133
PcsI	WCGNNNNNNNCGW	2 cut(s)	1534, 1858
PctI	GAATGC	2 cut(s)	1669, 2932
PdmI	GAANNNNTTC	2 cut(s)	1987, 2053
PflMI	CCANNNNNTGG	1 cut(s)	2939
PfoI	TCCNGGA	3 cut(s)	1759, 2005, 3064
PkrI	GCNGC	8 cut(s)	418, 1098, 1468, 1750, 1753, 2647, 2787, 3078
PleI	GAGTC	6 cut(s)	221, 554, 1621, 1846, 2249, 2554
PpsI	GAGTC	6 cut(s)	221, 554, 1621, 1846, 2249, 2554
PpuMI	RGGWCCY	2 cut(s)	1060, 1169
PscI	ACATGT	1 cut(s)	1213
PshBI	ATTAAT	1 cut(s)	1029
Psp124BI	GAGCTC	1 cut(s)	250
Psp5II	RGGWCCY	2 cut(s)	1060, 1169
Psp6I	CCWGG	7 cut(s)	80, 214, 802, 1647, 1759, 2968, 3064
PspEI	GGTNACC	1 cut(s)	2663
PspGI	CCWGG	7 cut(s)	80, 214, 802, 1647, 1759, 2968, 3064
PspN4I	GGNNCC	9 cut(s)	725, 994, 1062, 1089, 1170, 1498, 2196, 2795, 2944
PspPI	GGNCC	9 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 2942, 3062
PspPPI	RGGWCCY	2 cut(s)	1060, 1169
PstI	CTGCAG	1 cut(s)	787
PstNI	CAGNNNCTG	1 cut(s)	1184
PsuI	RGATCY	2 cut(s)	979, 2554
PvuII	CAGCTG	1 cut(s)	419
RsaI	GTAC	4 cut(s)	987, 1199, 1706, 1728
RsaNI	GTAC	4 cut(s)	986, 1198, 1705, 1727
RseI	CAYNNNNRTG	4 cut(s)	555, 732, 1050, 2535
SacI	GAGCTC	1 cut(s)	250
SapI	GCTCTTC	1 cut(s)	133
SaqAI	TTAA	6 cut(s)	702, 852, 1029, 2426, 2505, 2715
SatI	GCNGC	8 cut(s)	417, 1097, 1467, 1749, 1752, 2646, 2786, 3077
Sau3AI	GATC	7 cut(s)	180, 655, 979, 1186, 1939, 2554, 2845
Sau96I	GGNCC	9 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 2942, 3062
ScaI	AGTACT	2 cut(s)	1199, 1728
SchI	GAGTC	6 cut(s)	221, 554, 1622, 1847, 2250, 2555
ScrFI	CCNGG	8 cut(s)	82, 216, 804, 1649, 1761, 2007, 2970, 3066
SduI	GDGCHC	4 cut(s)	250, 394, 726, 2532
SfaNI	GCATC	5 cut(s)	913, 1120, 1283, 2512, 2559
SfcI	CTRYAG	1 cut(s)	783
Sfr274I	CTCGAG	2 cut(s)	1674, 1915
SfuI	TTCGAA	1 cut(s)	88
SinI	GGWCC	8 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 3062
SlaI	CTCGAG	2 cut(s)	1674, 1915
SmiI	ATTTAAAT	1 cut(s)	2427
SmiMI	CAYNNNNRTG	4 cut(s)	555, 732, 1050, 2535
SmlI	CTYRAG	4 cut(s)	1674, 1915, 2030, 2313
SmoI	CTYRAG	4 cut(s)	1674, 1915, 2030, 2313
SphI	GCATGC	1 cut(s)	2029
SseBI	AGGCCT	1 cut(s)	301
SspI	AATATT	2 cut(s)	1327, 2626
SspMI	CTAG	8 cut(s)	395, 989, 1035, 1065, 1173, 1493, 2550, 3081
SstI	GAGCTC	1 cut(s)	250
StuI	AGGCCT	1 cut(s)	301
StyD4I	CCNGG	8 cut(s)	80, 214, 802, 1647, 1759, 2005, 2968, 3064
StyI	CCWWGG	5 cut(s)	39, 1000, 1064, 1512, 2974
SwaI	ATTTAAAT	1 cut(s)	2427
TaiI	ACGT	3 cut(s)	1024, 1125, 1600
TaqII	GACCGA	1 cut(s)	2811
TatI	WGTACW	4 cut(s)	985, 1197, 1704, 1726
TauI	GCSGC	1 cut(s)	3079
Tru1I	TTAA	6 cut(s)	702, 852, 1029, 2426, 2505, 2715
Tru9I	TTAA	6 cut(s)	702, 852, 1029, 2426, 2505, 2715
TscAI	CASTG	7 cut(s)	698, 1052, 1422, 1796, 2236, 2443, 2532
TseFI	GTSAC	2 cut(s)	2080, 3049
TseI	GCWGC	7 cut(s)	416, 1096, 1466, 1748, 1751, 2645, 2785
Tsp45I	GTSAC	2 cut(s)	2080, 3049
TspGWI	ACGGA	4 cut(s)	688, 1227, 1995, 2187
TspRI	CASTG	7 cut(s)	698, 1052, 1422, 1796, 2236, 2443, 2532
Van91I	CCANNNNNTGG	1 cut(s)	2939
VneI	GTGCAC	1 cut(s)	2528
VpaK11BI	GGWCC	8 cut(s)	325, 1060, 1169, 1509, 2495, 2794, 2888, 3062
VspI	ATTAAT	1 cut(s)	1029
XagI	CCTNNNNNAGG	4 cut(s)	987, 1504, 2904, 2973
XapI	RAATTY	4 cut(s)	31, 741, 808, 1587
XbaI	TCTAGA	2 cut(s)	394, 2549
XceI	RCATGY	3 cut(s)	504, 1217, 2029
XhoI	CTCGAG	2 cut(s)	1674, 1915
XmaJI	CCTAGG	1 cut(s)	1064
XmnI	GAANNNNTTC	2 cut(s)	1987, 2053
XspI	CTAG	8 cut(s)	395, 989, 1035, 1065, 1173, 1493, 2550, 3081
ZrmI	AGTACT	2 cut(s)	1199, 1728

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.