Prupe.8G244400_v2.0.a1

HUA2-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
21280859 .. 21290558
9700 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G244400.1

Sequence Viewer

Length: 4296 bp
ATGGCGCCCAGCCGAAGGAAAGGAGCTAGCAAAGCCGCTCAGGCCGCCGCTGCTCGCCGCCAGTGGAAGGTTGGCGATCTTGTACTTGCTAAGGTCAAAGGCTTCCCTGCTTGGCCTGCTACGGTAAGTGAGCCTGAGAAGTGGGGTTACTCTGCTGATTGGAAGAAAGTACTTGTCTACTTCTTTGGAACCCAACAGATAGCGTTCTGCAACCCTGCGGATGTTGAGGCATTTACTGAGGAGAAGAAACAGTCTCTTCTGGGCAAGCGTCATGGAAAGGGTTCAGATTTTGTTCGTGCAGTCCAGGAGATCATTGATAGCTATGACAAGCTGAAGAAAGAGGACCAAGTTGATGATTTCAACTCCACTGCAAATGGAGGGAACTCAGTGGACTCTTCGTCCAACTTTGGTTCGAAGGATCAGTCCGAAGCTCCTGAAGCTATTCTTGATTCACGCTCGAAATCTTCACATTCAACAATTGATAGAAATGAGCCAAGTTTATCTGTTGAGGATGCTTCAGCGACTGCACAAATAGATGCAATGGTTGATAAGGAGGCCCTAACTGAGGAACCTGCTGCCACAGAAATGGTTACTGAAACACCTCGGCCAGTGACCTGCTCTTCAAGAAAAAGATCAAGACATTCGCGACCACAGAAAGAGGAAGCACCAGCTCGTCGATCAAGAAGCTCATCTAGGATGGAATCGCGTAGATTACGGAACCTCATAATGCCATGTGATGATGATGCCAAGGATGCTAGGGACGTATCTGGTAATCTAGTTCGAGATAGGTGTTTAAGAAGGAATAAACGAATACGGAAATCACCTGATAACTCTGAGTGTGATGATGTGAATTCAGCTGCTTTTGTTTCAAATGGTTTTATTGAAGACAATGGTTCTGAAGTAGTCACAGTTGATTCTGACACATTTAGTCTTGATGAAGGTGGTGCTATTGATTCTGGTTGTAAAGGTGAACATTCAGAGACTGTTGTCGAATGCATGGATGGTGATGCTCAGTTGATCAAAGGACTTGATCTAGGAGGTAAGGTTGTTATTAAGAAGAAAAGGAAGCCGAACAGAAAGCGAGTTACTAATGATGTATCTGAGCCTATTAGCATGTTGGACAAGGAGACAGTTTTGGAGGTTGGTTTGCAAAGCAGTAGTCAGACTCTGCAGACTGATTGTGGAAAGATGAATGGGACTTGTTCCAAGGAAAATGGAACTTCTTCTAAGGAAGATGGAGATGAGCACTTGCCATTGGTGAAACGAGCCAGGGTGCGAATGGGCAAACCATCTTCTGCTAATGAGGAAGCTGATAGCTTTGCGCACAATGAAGGAAGTTTGAAGGAAGTTATGGTCAATTCATCAGAGCCGATCAGCACATCCTCTAATTGTGATGAAAATTTCCCTGCTGCTAGGGACTCATTTGTGGTAAATGAAGCTCTGGATAATATAACACCTTCAAGAGGTTGCACTCGAATTTTGGGAAATAGGCCTCATCTTTGGAACACCAAGAAAGACCAATCATTTGGTTCATCCGCTGATGGTGAAGCTGTTTTACCTCCATCTAAGCGTCTTCATCGCGCTCTAGAAGCCATGTCAGCTAATGCTGCTGACGAGGATGATAGATGCCATTATGAATCTTCAATCTTGAAGATGTCTACGATTGGTTGCCATATTTCATCCACGAGCAGATGCCTCCCTATCGCTGTGGAAAGTGGTACAGGGAATGGTTTGGGACTTCAGAGTGACGACTCTTTGGGCAATAAAGCTTCAGGGGTTGATGCTTCTAGATTCTCTACCAGTTCAAACCCTGTAACCTTGGAGGAAAATACTAAATCAGTCGTGGAAGTGGATGTTGATCAAAGAACTGAGAGTCCTAACATTCAAATTCATGAATGTTCAATTAATGATTTTCCAGATTCTGGGGACCTTGCTGATGATAAAAATCTTAGTGGTGGTTCTTCTGGTTGTCACACTATTGGAACTGCAGTCCAGACTGAAAGTCCAGTGCATTTATTGCCTAATGTGGATATAAGAGAGGCTGGTACTGGAGCTAATCAAGCTTCAATGGGTGAGTTGCCTCTGAAAGGTGATGCTAAAAATGAATTGAGCAATTGTGATGCAGAAAATCCTGATATTGAATGTGATACGTCAGAGCCTGCTCTGAAGAGCACAGATCCTGTATCAGGCACCATCCATGGGATGGTTGAAGTTTCACCTCGAAATGATGCAAGTCCACGTCACTATGGTGGAGAAGGTGCCAGTGAGAATATCGAGTTTTTGGAGCCCCGTTCTGAAGATAACAGAGAGGTCAATGACATGTTTGATGTTGTGAGAGAGGTCGAAAATAGACAAACAGAGAAGGATCCAAGTTCAGTTTCTTATCCAAATGAGTATTTAGGTGAGAAAACCGTATCTGGTATCCGGTCAAGTCCATCCGTAACAGATGGAGGAGATTCTCTTGCACAAGCATCACCTCCCAATACCTCAGGTTGTCGCATGTCTACTTCAGATAGTAGTAATATTCTTCAGAACAATGGCAGTTGTAGTCCTGATGTTGATTTACAAGACAAGAGAACTTCATCTACTCCAGTTGATGAGGATGGAAAGTCTGAATCAGTGGTTAGTCAAAGACCAAAATCTGTGGGCAGGTATGAAGAAGCACTTGCTGCTCTCACATCATTTGAGACAACGCTTGGAACATTGACAAGGACCAAGGAGAGCATTGGTCGAGCAACTCGTGTAGCCATTGACTGTGGAAAGATTGGTGTAGCTGCGAAGGCATTGGAAATTCTTGCCCGTCATTTGGAAACTGAGTCAAGGTTACACAGACGGGTGGACTTATTCTTCTTGGTGGATTCAATCACTCAGTACTCTCGAGGTTTGAAGGGTGATGGTGGTGGTATGTACCTTTCTGCTATCCAAGCAGTCCTGCCACGGTTGTTGTCAGCTGCTGCTCCTCCTGGAAGTGCTGCACATGAAAATCGTAGGCAGTGTCTAAAGGTTTTGAGACTTTGGTCGGAAAGAAGGATTTTTCCAGAGTCCATAATTCATCGCCATATGCGAGAACTGAATTCCCTTACTGGGCCTTCTTCTGCCGGTGCCTATGGTAGGCGCTCCTCGAGAACAGAAAGGTCTTTGGATGATCCTCTTAGAGAAATGGAGGGTATGCTTGTTGACGAATATGGAAGCAATTCAAGTTTTCAACTTCCGGGATTTTGTATGCCCCGCATGCTCAAGGATGAACATGATGGAAGTGATTCTGATGGGGAAAGTTTTGAAGCTGTCACTCCTGAGCATAATCCTCGTGGGCATGAAGAATATGAAACCACACCTGCTACTGAAAGGCATAGGCATATCTTGGAAGATGTCGATGGAGAGCTTGAAATGGAGGATGTCGCTCCTTCTTGTGATGTTGACACAAGTTCATCTTGTGGTGTTGCCATAGCTAATACTGTGCAGGCTTCACATAATCAGTTTGAACAGAACTGTCCATTGCCCCTTGCCCCTCCATTACCTCAAGATGTGCCACCATCATCTCCTCCACTACCATCTTCTCCTCCGCCTCCGCCACCACCACCACCTCTGCCTCCACCTGTTGTCATCCACCCTCCATGTTCTAACTTGGATGCGCATTTGCAGAACGTGCAAGAAAATAGAGTTCAACCTCCACCCCAGCAGTTGAATGCACCAAGAATCAACCAAACAATTTCTGATGCCGTGCACTTTCGCGCCCCTGAATGTAGAGATCTTCAAAGACAGATGCCTGATTCTACTTCTTGCTCTTATAGTAGTTTTCCTACATATTCAGGGAGAAATGTTCCACAAACTGATGGTGCTACCTTTCATAATAAAGGTTACCCTTTACGACCACCTCATGCTCCACCATCAAATCAGTTCTCTTATGTTCAAGGAGATCAGCAGGTAAAGCCTCGACGGGAGGCGCCGCCTCCTTATCACAACAGATTTGACTTTGGGCCGAATGGGGACAGAGAAAACTATTACAATAATCATGAAAGAATGAAACCCCCTTATGAGCCCCGTGAGAGCTGGGGGTTTCCTCCACATTCTTTTTCTGGTCGATATCCTGACAAGGGCAAGACGTCTTATGGAACTGCCCCCTTTCGTGGCCCCCCATGTGAACCAACAAGGTTACCTGGCCAAGGGTGGAGATATCCTCCCCGATCAATGAACCACAGAGAGTCTATGCCCTTTAGACCACCTTTTGAAGGTCCAATACCCGTCAACGGCAGAGATTATGGTGGTTCAGGTCCAAGCTTCTGGCGGCCACGATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1432

Amino Acids

156.29

Weight (kDa)

5.38

Isoelectric Point (pI)

62.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3343
AatII GACGTC 1 cut(s) 4106
Acc16I TGCGCA 2 cut(s) 1323, 3633
Acc36I ACCTGC 5 cut(s) 580, 623, 2640, 3343, 3913
AccB1I GGYRCC 5 cut(s) 4, 2189, 2258, 3101, 3943
AccB7I CCANNNNNTGG 2 cut(s) 1922, 2203
AccBSI CCGCTC 1 cut(s) 38
AccI GTMKAC 3 cut(s) 177, 1658, 2504
AccII CGCG 4 cut(s) 646, 706, 1581, 3732
AclWI GGATC 5 cut(s) 426, 2171, 2360, 2373, 3140
AcoI YGGCCR 3 cut(s) 605, 4159, 4286
AcsI RAATTY 6 cut(s) 850, 1399, 1476, 1887, 2790, 3073
AcyI GRCGYC 3 cut(s) 5, 3944, 4103
AfaI GTAC 6 cut(s) 84, 171, 1720, 2047, 2873, 2909
AflIII ACRYGT 1 cut(s) 2319
AhdI GACNNNNNGTC 2 cut(s) 397, 2001
AjiI CACGTC 1 cut(s) 2240
AjnI CCWGG 4 cut(s) 303, 1268, 2962, 4156
AjuI GAANNNNNNNTTGG 2 cut(s) 2362, 2394
AleI CACNNNNGTG 1 cut(s) 2247
AloI GAACNNNNNNTCC 2 cut(s) 1858, 1890
Alw21I GWGCWC 3 cut(s) 1248, 2174, 3726
Alw26I GTCTC 5 cut(s) 258, 974, 1121, 2681, 3004
Alw44I GTGCAC 1 cut(s) 3722
AlwI GGATC 5 cut(s) 426, 2171, 2360, 2373, 3140
AlwNI CAGNNNCTG 7 cut(s) 524, 983, 1168, 1922, 2159, 2180, 2954
Ama87I CYCGRG 2 cut(s) 2877, 3121
ApaLI GTGCAC 1 cut(s) 3722
ApoI RAATTY 6 cut(s) 850, 1399, 1476, 1887, 2790, 3073
ArsI GACNNNNNNTTYG 6 cut(s) 407, 439, 1144, 1176, 1508, 1540
AseI ATTAAT 1 cut(s) 1905
Asp700I GAANNNNTTC 5 cut(s) 280, 441, 1222, 3193, 3259
AspLEI GCGC 7 cut(s) 7, 1324, 1583, 3117, 3634, 3734, 3946
AspS9I GGNCC 9 cut(s) 343, 556, 1927, 2712, 3086, 3977, 4130, 4232, 4271
AsuC2I CCSGG 1 cut(s) 3213
AsuII TTCGAA 1 cut(s) 413
AsuNHI GCTAGC 1 cut(s) 26
AvaI CYCGRG 2 cut(s) 2877, 3121
AvaII GGWCC 5 cut(s) 343, 1927, 2712, 4232, 4271
AxyI CCTNAGG 1 cut(s) 2488
BaeGI GKGCMC 1 cut(s) 3726
BalI TGGCCA 1 cut(s) 4161
BamHI GGATCC 1 cut(s) 2365
BanI GGYRCC 5 cut(s) 4, 2189, 2258, 3101, 3943
BanII GRGCYC 2 cut(s) 2289, 4041
BarI GAAGNNNNNNTAC 6 cut(s) 131, 163, 1539, 1571, 4221, 4253
BauI CACGAG 3 cut(s) 1684, 2739, 3306
BbsI GAAGAC 2 cut(s) 891, 1565
Bbv12I GWGCWC 3 cut(s) 1248, 2174, 3726
BceAI ACGGC 2 cut(s) 3704, 4264
BcgI CGANNNNNNTGC 2 cut(s) 3287, 3321
BciT130I CCWGG 4 cut(s) 305, 1270, 2964, 4158
BciVI GTATCC 1 cut(s) 2432
BclI TGATCA 2 cut(s) 1017, 1858
BcnI CCSGG 1 cut(s) 3213
BcoDI GTCTC 5 cut(s) 258, 974, 1121, 2681, 3004
BfaI CTAG 8 cut(s) 27, 693, 756, 776, 1034, 1413, 1586, 1788
BfmI CTRYAG 2 cut(s) 1169, 1986
BfoI RGCGCY 3 cut(s) 8, 3118, 3947
BfuAI ACCTGC 5 cut(s) 580, 623, 2640, 3343, 3913
BfuI GTATCC 1 cut(s) 2432
BglI GCCNNNNNGGC 1 cut(s) 41
BglII AGATCT 1 cut(s) 3748
BmcAI AGTACT 2 cut(s) 171, 2873
Bme1390I CCNGG 5 cut(s) 305, 1270, 2964, 3213, 4158
Bme18I GGWCC 5 cut(s) 343, 1927, 2712, 4232, 4271
BmeRI GACNNNNNGTC 2 cut(s) 397, 2001
BmeT110I CYCGRG 2 cut(s) 2877, 3121
BmgBI CACGTC 1 cut(s) 2240
BmgT120I GGNCC 9 cut(s) 343, 556, 1927, 2712, 3086, 3977, 4130, 4232, 4271
BmrFI CCNGG 5 cut(s) 305, 1270, 2964, 3213, 4158
BmrI ACTGGG 1 cut(s) 3093
BmtI GCTAGC 1 cut(s) 30
BmuI ACTGGG 1 cut(s) 3093
BoxI GACNNNNGTC 2 cut(s) 986, 3016
BpiI GAAGAC 2 cut(s) 891, 1565
BplI GAGNNNNNCTC 2 cut(s) 4162, 4194
BpmI CTGGAG 2 cut(s) 2070, 2574
Bpu10I CCTNAGC 3 cut(s) 39, 90, 3294
Bpu14I TTCGAA 1 cut(s) 413
BpuEI CTTGAG 2 cut(s) 3221, 3504
BpuMI CCSGG 1 cut(s) 3213
BsaBI GATNNNNATC 2 cut(s) 1857, 1944
BsaHI GRCGYC 3 cut(s) 5, 3944, 4103
BsaJI CCNNGG 9 cut(s) 602, 747, 1206, 1269, 1818, 2197, 2715, 2936, 4162
BsaWI WCCGGW 1 cut(s) 2424
BsaXI ACNNNNNCTCC 2 cut(s) 1029, 1059
Bse118I RCCGGY 1 cut(s) 3098
Bse1I ACTGG 8 cut(s) 61, 608, 1800, 2006, 2053, 2262, 2591, 3088
Bse21I CCTNAGG 1 cut(s) 2488
Bse3DI GCAATG 2 cut(s) 546, 3494
Bse8I GATNNNNATC 2 cut(s) 1857, 1944
BseBI CCWGG 4 cut(s) 305, 1270, 2964, 4158
BseDI CCNNGG 9 cut(s) 602, 747, 1206, 1269, 1818, 2197, 2715, 2936, 4162
BseJI GATNNNNATC 2 cut(s) 1857, 1944
BseMI GCAATG 2 cut(s) 546, 3494
BseNI ACTGG 8 cut(s) 61, 608, 1800, 2006, 2053, 2262, 2591, 3088
BseRI GAGGAG 6 cut(s) 254, 2466, 2949, 3109, 3531, 3549
BseSI GKGCMC 1 cut(s) 3726
BseYI CCCAGC 3 cut(s) 8, 3675, 4050
BsgI GTGCAG 4 cut(s) 318, 510, 2958, 3479
Bsh1236I CGCG 4 cut(s) 646, 706, 1581, 3732
BshNI GGYRCC 5 cut(s) 4, 2189, 2258, 3101, 3943
BsiHKAI GWGCWC 3 cut(s) 1248, 2174, 3726
BsiHKCI CYCGRG 2 cut(s) 2877, 3121
BsiSI CCGG 3 cut(s) 2425, 3099, 3212
BslFI GGGAC 6 cut(s) 773, 1210, 1430, 1749, 1940, 4001
BsmAI GTCTC 5 cut(s) 258, 974, 1121, 2681, 3004
BsmFI GGGAC 6 cut(s) 773, 1210, 1430, 1749, 1940, 4001
BsmI GAATGC 2 cut(s) 998, 3691
BsoBI CYCGRG 2 cut(s) 2877, 3121
Bsp119I TTCGAA 1 cut(s) 413
Bsp1286I GDGCHC 5 cut(s) 1248, 2174, 2289, 3726, 4041
Bsp19I CCATGG 1 cut(s) 2197
Bsp68I TCGCGA 1 cut(s) 646
BspFNI CGCG 4 cut(s) 646, 706, 1581, 3732
BspHI TCATGA 2 cut(s) 1891, 4012
BspMAI CTGCAG 2 cut(s) 1173, 1990
BspMI ACCTGC 5 cut(s) 580, 623, 2640, 3343, 3913
BspOI GCTAGC 1 cut(s) 30
BspPI GGATC 5 cut(s) 426, 2171, 2360, 2373, 3140
BspQI GCTCTTC 2 cut(s) 625, 2162
BspT104I TTCGAA 1 cut(s) 413
BspT107I GGYRCC 5 cut(s) 4, 2189, 2258, 3101, 3943
BsrBI CCGCTC 1 cut(s) 38
BsrDI GCAATG 2 cut(s) 546, 3494
BsrFI RCCGGY 1 cut(s) 3098
BsrI ACTGG 8 cut(s) 61, 608, 1800, 2006, 2053, 2262, 2591, 3088
BssAI RCCGGY 1 cut(s) 3098
BssECI CCNNGG 9 cut(s) 602, 747, 1206, 1269, 1818, 2197, 2715, 2936, 4162
BssNI GRCGYC 3 cut(s) 5, 3944, 4103
BssSI CACGAG 3 cut(s) 1684, 2739, 3306
BssT1I CCWWGG 6 cut(s) 747, 1206, 1818, 2197, 2715, 4162
Bst2BI CACGAG 3 cut(s) 1684, 2739, 3306
Bst2UI CCWGG 4 cut(s) 305, 1270, 2964, 4158
Bst6I CTCTTC 4 cut(s) 261, 400, 625, 2162
BstACI GRCGYC 3 cut(s) 5, 3944, 4103
BstAPI GCANNNNNTGC 3 cut(s) 2017, 2669, 3646
BstBI TTCGAA 1 cut(s) 413
BstC8I GCNNGC 7 cut(s) 28, 55, 117, 266, 2160, 3233, 3462
BstDSI CCRYGG 2 cut(s) 2197, 2936
BstEII GGTNACC 2 cut(s) 3857, 4152
BstENI CCTNNNNNAGG 7 cut(s) 563, 1461, 2085, 2184, 3109, 4161, 4227
BstFNI CGCG 4 cut(s) 646, 706, 1581, 3732
BstH2I RGCGCY 3 cut(s) 8, 3118, 3947
BstHHI GCGC 7 cut(s) 7, 1324, 1583, 3117, 3634, 3734, 3946
BstMAI GTCTC 5 cut(s) 258, 974, 1121, 2681, 3004
BstNI CCWGG 4 cut(s) 305, 1270, 2964, 4158
BstNSI RCATGY 4 cut(s) 1117, 2323, 2503, 3235
BstPAI GACNNNNGTC 2 cut(s) 986, 3016
BstPI GGTNACC 2 cut(s) 3857, 4152
BstSCI CCNGG 5 cut(s) 303, 1268, 2962, 3211, 4156
BstSFI CTRYAG 2 cut(s) 1169, 1986
BstSLI GKGCMC 1 cut(s) 3726
BstUI CGCG 4 cut(s) 646, 706, 1581, 3732
BstV2I GAAGAC 2 cut(s) 891, 1565
BstX2I RGATCY 3 cut(s) 2176, 2365, 3748
BstXI CCANNNNNNTGG 3 cut(s) 586, 1526, 4281
BstYI RGATCY 3 cut(s) 2176, 2365, 3748
Bsu36I CCTNAGG 1 cut(s) 2488
BsuI GTATCC 1 cut(s) 2432
BtgI CCRYGG 2 cut(s) 2197, 2936
BtgZI GCGATG 2 cut(s) 1562, 3038
BtrI CACGTC 1 cut(s) 2240
BtsI GCAGTG 2 cut(s) 366, 2999
BtsIMutI CAGTG 8 cut(s) 68, 366, 393, 615, 2013, 2269, 2625, 2999
BtuMI TCGCGA 1 cut(s) 646
BveI ACCTGC 5 cut(s) 580, 623, 2640, 3343, 3913
Cac8I GCNNGC 7 cut(s) 28, 55, 117, 266, 2160, 3233, 3462
CaiI CAGNNNCTG 7 cut(s) 524, 983, 1168, 1922, 2159, 2180, 2954
CciI TCATGA 2 cut(s) 1891, 4012
CfoI GCGC 7 cut(s) 7, 1324, 1583, 3117, 3634, 3734, 3946
Cfr10I RCCGGY 1 cut(s) 3098
Cfr13I GGNCC 9 cut(s) 343, 556, 1927, 2712, 3086, 3977, 4130, 4232, 4271
CseI GACGC 2 cut(s) 257, 1559
Csp6I GTAC 6 cut(s) 83, 170, 1719, 2046, 2872, 2908
CspCI CAANNNNNGTGG 4 cut(s) 2625, 2660, 2925, 2960
CviQI GTAC 6 cut(s) 83, 170, 1719, 2046, 2872, 2908
DinI GGCGCC 2 cut(s) 6, 3945
DriI GACNNNNNGTC 2 cut(s) 397, 2001
EaeI YGGCCR 3 cut(s) 605, 4159, 4286
Eam1104I CTCTTC 4 cut(s) 261, 400, 625, 2162
Eam1105I GACNNNNNGTC 2 cut(s) 397, 2001
EarI CTCTTC 4 cut(s) 261, 400, 625, 2162
EciI GGCGGA 2 cut(s) 3552, 3558
Eco130I CCWWGG 6 cut(s) 747, 1206, 1818, 2197, 2715, 4162
Eco147I AGGCCT 1 cut(s) 1492
Eco24I GRGCYC 2 cut(s) 2289, 4041
Eco32I GATATC 2 cut(s) 4085, 4175
Eco47I GGWCC 5 cut(s) 343, 1927, 2712, 4232, 4271
Eco81I CCTNAGG 1 cut(s) 2488
Eco88I CYCGRG 2 cut(s) 2877, 3121
Eco91I GGTNACC 2 cut(s) 3857, 4152
EcoNI CCTNNNNNAGG 7 cut(s) 563, 1461, 2085, 2184, 3109, 4161, 4227
EcoO109I RGGNCCY 2 cut(s) 556, 1927
EcoO65I GGTNACC 2 cut(s) 3857, 4152
EcoRI GAATTC 2 cut(s) 850, 3073
EcoRII CCWGG 4 cut(s) 303, 1268, 2962, 4156
EcoRV GATATC 2 cut(s) 4085, 4175
EcoT14I CCWWGG 6 cut(s) 747, 1206, 1818, 2197, 2715, 4162
EcoT22I ATGCAT 1 cut(s) 998
EcoT38I GRGCYC 2 cut(s) 2289, 4041
EgeI GGCGCC 2 cut(s) 6, 3945
EheI GGCGCC 2 cut(s) 6, 3945
ErhI CCWWGG 6 cut(s) 747, 1206, 1818, 2197, 2715, 4162
FalI AAGNNNNNCTT 6 cut(s) 429, 461, 2649, 2681, 3415, 3447
FaqI GGGAC 6 cut(s) 773, 1210, 1430, 1749, 1940, 4001
FauI CCCGC 1 cut(s) 3236
FauNDI CATATG 1 cut(s) 3060
FbaI TGATCA 2 cut(s) 1017, 1858
FblI GTMKAC 3 cut(s) 177, 1658, 2504
FriOI GRGCYC 2 cut(s) 2289, 4041
FspAI RTGCGCAY 1 cut(s) 3633
FspBI CTAG 8 cut(s) 27, 693, 756, 776, 1034, 1413, 1586, 1788
FspI TGCGCA 2 cut(s) 1323, 3633
GlaI GCGC 7 cut(s) 6, 1323, 1582, 3116, 3633, 3733, 3945
GsaI CCCAGC 3 cut(s) 12, 3679, 4054
GsuI CTGGAG 2 cut(s) 2070, 2574
HaeII RGCGCY 3 cut(s) 8, 3118, 3947
HapII CCGG 3 cut(s) 2425, 3099, 3212
HgaI GACGC 2 cut(s) 257, 1559
HhaI GCGC 7 cut(s) 7, 1324, 1583, 3117, 3634, 3734, 3946
Hin1I GRCGYC 3 cut(s) 5, 3944, 4103
Hin6I GCGC 7 cut(s) 5, 1322, 1581, 3115, 3632, 3732, 3944
HinP1I GCGC 7 cut(s) 5, 1322, 1581, 3115, 3632, 3732, 3944
HincII GTYRAC 3 cut(s) 3178, 3418, 4246
HindII GTYRAC 3 cut(s) 3178, 3418, 4246
HindIII AAGCTT 3 cut(s) 1767, 2061, 4276
HpaII CCGG 3 cut(s) 2425, 3099, 3212
Hpy99I CGWCG 2 cut(s) 678, 3939
HpyCH4IV ACGT 5 cut(s) 762, 2150, 2239, 3645, 4103
HpySE526I ACGT 5 cut(s) 762, 2150, 2239, 3645, 4103
Hsp92I GRCGYC 3 cut(s) 5, 3944, 4103
HspAI GCGC 7 cut(s) 5, 1322, 1581, 3115, 3632, 3732, 3944
KasI GGCGCC 2 cut(s) 4, 3943
Ksp22I TGATCA 2 cut(s) 1017, 1858
LguI GCTCTTC 2 cut(s) 625, 2162
LmnI GCTCC 8 cut(s) 23, 436, 2051, 2284, 2962, 3122, 3406, 3886
MaeI CTAG 8 cut(s) 27, 693, 756, 776, 1034, 1413, 1586, 1788
MaeII ACGT 5 cut(s) 762, 2150, 2239, 3645, 4103
MbiI CCGCTC 1 cut(s) 38
MfeI CAATTG 2 cut(s) 477, 2113
MflI RGATCY 3 cut(s) 2176, 2365, 3748
MhlI GDGCHC 5 cut(s) 1248, 2174, 2289, 3726, 4041
MlsI TGGCCA 1 cut(s) 4161
MluNI TGGCCA 1 cut(s) 4161
Mly113I GGCGCC 2 cut(s) 5, 3944
MlyI GAGTC 8 cut(s) 386, 1159, 1412, 1745, 1882, 2825, 3050, 4211
MmeI TCCRAC 3 cut(s) 426, 1098, 3000
Mox20I TGGCCA 1 cut(s) 4161
Mph1103I ATGCAT 1 cut(s) 998
MroXI GAANNNNTTC 5 cut(s) 280, 441, 1222, 3193, 3259
MscI TGGCCA 1 cut(s) 4161
MseI TTAA 3 cut(s) 794, 1053, 1905
MslI CAYNNNNRTG 2 cut(s) 584, 2247
Msp20I TGGCCA 1 cut(s) 4161
MspA1I CMGCKG 4 cut(s) 50, 857, 1538, 2951
MspI CCGG 3 cut(s) 2425, 3099, 3212
MspR9I CCNGG 5 cut(s) 305, 1270, 2964, 3213, 4158
MunI CAATTG 2 cut(s) 477, 2113
Mva1269I GAATGC 2 cut(s) 998, 3691
MvaI CCWGG 4 cut(s) 305, 1270, 2964, 4158
MvnI CGCG 4 cut(s) 646, 706, 1581, 3732
NarI GGCGCC 2 cut(s) 5, 3944
NciI CCSGG 1 cut(s) 3213
NcoI CCATGG 1 cut(s) 2197
NdeI CATATG 1 cut(s) 3060
NheI GCTAGC 1 cut(s) 26
NmeAIII GCCGAG 1 cut(s) 583
NmuCI GTSAC 6 cut(s) 610, 904, 1745, 1970, 2240, 3286
NruI TCGCGA 1 cut(s) 646
NsbI TGCGCA 2 cut(s) 1323, 3633
NsiI ATGCAT 1 cut(s) 998
NspI RCATGY 4 cut(s) 1117, 2323, 2503, 3235
NspV TTCGAA 1 cut(s) 413
OliI CACNNNNGTG 1 cut(s) 2247
PaeI GCATGC 1 cut(s) 3235
PaeR7I CTCGAG 2 cut(s) 2877, 3121
PagI TCATGA 2 cut(s) 1891, 4012
PaqCI CACCTGC 1 cut(s) 3343
PceI AGGCCT 1 cut(s) 1492
PciI ACATGT 1 cut(s) 2319
PciSI GCTCTTC 2 cut(s) 625, 2162
PcsI WCGNNNNNNNCGW 2 cut(s) 2737, 3061
PctI GAATGC 2 cut(s) 998, 3691
PdmI GAANNNNTTC 5 cut(s) 280, 441, 1222, 3193, 3259
PflMI CCANNNNNTGG 2 cut(s) 1922, 2203
PfoI TCCNGGA 3 cut(s) 303, 2962, 3211
PleI GAGTC 8 cut(s) 386, 1159, 1412, 1745, 1881, 2824, 3049, 4210
PluTI GGCGCC 2 cut(s) 8, 3947
PpsI GAGTC 8 cut(s) 386, 1159, 1412, 1745, 1881, 2824, 3049, 4210
PpuMI RGGWCCY 1 cut(s) 1927
PscI ACATGT 1 cut(s) 2319
PshAI GACNNNNGTC 2 cut(s) 986, 3016
PshBI ATTAAT 1 cut(s) 1905
Psp5II RGGWCCY 1 cut(s) 1927
Psp6I CCWGG 4 cut(s) 303, 1268, 2962, 4156
PspEI GGTNACC 2 cut(s) 3857, 4152
PspFI CCCAGC 3 cut(s) 8, 3675, 4050
PspGI CCWGG 4 cut(s) 303, 1268, 2962, 4156
PspPI GGNCC 9 cut(s) 343, 556, 1927, 2712, 3086, 3977, 4130, 4232, 4271
PspPPI RGGWCCY 1 cut(s) 1927
PsrI GAACNNNNNNTAC 2 cut(s) 2569, 2601
PstI CTGCAG 2 cut(s) 1173, 1990
PstNI CAGNNNCTG 7 cut(s) 524, 983, 1168, 1922, 2159, 2180, 2954
PsuI RGATCY 3 cut(s) 2176, 2365, 3748
PvuII CAGCTG 2 cut(s) 857, 2951
RruI TCGCGA 1 cut(s) 646
RsaI GTAC 6 cut(s) 84, 171, 1720, 2047, 2873, 2909
RsaNI GTAC 6 cut(s) 83, 170, 1719, 2046, 2872, 2908
RseI CAYNNNNRTG 2 cut(s) 584, 2247
SapI GCTCTTC 2 cut(s) 625, 2162
SaqAI TTAA 3 cut(s) 794, 1053, 1905
Sau96I GGNCC 9 cut(s) 343, 556, 1927, 2712, 3086, 3977, 4130, 4232, 4271
ScaI AGTACT 2 cut(s) 171, 2873
SchI GAGTC 8 cut(s) 386, 1159, 1412, 1745, 1882, 2825, 3050, 4211
ScrFI CCNGG 5 cut(s) 305, 1270, 2964, 3213, 4158
SduI GDGCHC 5 cut(s) 1248, 2174, 2289, 3726, 4041
SfcI CTRYAG 2 cut(s) 1169, 1986
SfoI GGCGCC 2 cut(s) 6, 3945
Sfr274I CTCGAG 2 cut(s) 2877, 3121
SfuI TTCGAA 1 cut(s) 413
SinI GGWCC 5 cut(s) 343, 1927, 2712, 4232, 4271
SlaI CTCGAG 2 cut(s) 2877, 3121
SmiMI CAYNNNNRTG 2 cut(s) 584, 2247
SmlI CTYRAG 4 cut(s) 2877, 3121, 3236, 3519
SmoI CTYRAG 4 cut(s) 2877, 3121, 3236, 3519
SphI GCATGC 1 cut(s) 3235
SseBI AGGCCT 1 cut(s) 1492
SspDI GGCGCC 2 cut(s) 4, 3943
SspI AATATT 1 cut(s) 2524
SspMI CTAG 8 cut(s) 27, 693, 756, 776, 1034, 1413, 1586, 1788
StuI AGGCCT 1 cut(s) 1492
StyD4I CCNGG 5 cut(s) 303, 1268, 2962, 3211, 4156
StyI CCWWGG 6 cut(s) 747, 1206, 1818, 2197, 2715, 4162
TaiI ACGT 5 cut(s) 765, 2153, 2242, 3648, 4106
TatI WGTACW 3 cut(s) 82, 169, 2871
TauI GCSGC 6 cut(s) 38, 47, 50, 60, 3949, 4288
Tru1I TTAA 3 cut(s) 794, 1053, 1905
Tru9I TTAA 3 cut(s) 794, 1053, 1905
TscAI CASTG 8 cut(s) 68, 373, 393, 615, 2013, 2269, 2625, 2999
TseFI GTSAC 6 cut(s) 610, 904, 1745, 1970, 2240, 3286
Tsp45I GTSAC 6 cut(s) 610, 904, 1745, 1970, 2240, 3286
TspGWI ACGGA 3 cut(s) 730, 829, 2428
TspRI CASTG 8 cut(s) 68, 373, 393, 615, 2013, 2269, 2625, 2999
Van91I CCANNNNNTGG 2 cut(s) 1922, 2203
VneI GTGCAC 1 cut(s) 3722
VpaK11BI GGWCC 5 cut(s) 343, 1927, 2712, 4232, 4271
VspI ATTAAT 1 cut(s) 1905
XagI CCTNNNNNAGG 7 cut(s) 563, 1461, 2085, 2184, 3109, 4161, 4227
XapI RAATTY 6 cut(s) 850, 1399, 1476, 1887, 2790, 3073
XbaI TCTAGA 2 cut(s) 1585, 1787
XceI RCATGY 4 cut(s) 1117, 2323, 2503, 3235
XcmI CCANNNNNNNNNTGG 3 cut(s) 68, 1276, 2200
XhoI CTCGAG 2 cut(s) 2877, 3121
XmiI GTMKAC 3 cut(s) 177, 1658, 2504
XmnI GAANNNNTTC 5 cut(s) 280, 441, 1222, 3193, 3259
XspI CTAG 8 cut(s) 27, 693, 756, 776, 1034, 1413, 1586, 1788
ZraI GACGTC 1 cut(s) 4104
ZrmI AGTACT 2 cut(s) 171, 2873
Zsp2I ATGCAT 1 cut(s) 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.