HUA2-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G48160 AT2G48160 AT3G63070 |
| fragaria_vesca | FvH4_2g23910 FvH4_2g23910 FvH4_2g23910 |
| malus_domestica | MD03G1268600.v1.1 MD11G1289400.v1.1 |
| prunus_persica | Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 |
| pyrus_communis | pycom11g25680 |
| rosa_chinensis | RchiOBHm_Chr6g0291521 RchiOBHm_Chr6g0291531 |
| rosa_laevigata | RLG00000012109 |
| rosa_multiflora | Rmu_co8000626.1_g000001 Rmu_co8259725.1_g000001 Rmu_co8294861.1_g000001 Rmu_sc0012363.1_g000001 Rmu_sc0024207.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00405040 Rroxscaffold_7G00175990 |
| rosa_rugosa | Rorug06G0220200 |
| rosa_samantha | Rh6AG332300 Rh6BG339200 Rh6CG345400 Rh6DG332800 |
| rosa_wichuraiana | Rw6G028860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 38, 2034 |
| AccB1I | GGYRCC | 2 cut(s) | 1320, 1589 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3536 |
| AccI | GTMKAC | 1 cut(s) | 3261 |
| AclWI | GGATC | 4 cut(s) | 1571, 1778, 2531, 3437 |
| AcoI | YGGCCR | 2 cut(s) | 3272, 3567 |
| AcsI | RAATTY | 4 cut(s) | 628, 1338, 1405, 2184 |
| AcuI | CTGAAG | 8 cut(s) | 333, 348, 767, 1038, 1161, 1586, 1872, 1913 |
| AcvI | CACGTG | 1 cut(s) | 164 |
| AcyI | GRCGYC | 1 cut(s) | 3512 |
| AdeI | CACNNNGTG | 2 cut(s) | 3049, 3341 |
| AfaI | GTAC | 6 cut(s) | 1441, 1584, 1796, 1866, 2303, 2325 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 472, 1586, 1666, 2103, 3213, 3503, 3536, 3571, 3631 |
| AflIII | ACRYGT | 1 cut(s) | 1810 |
| AjiI | CACGTC | 1 cut(s) | 2195 |
| AjnI | CCWGG | 8 cut(s) | 122, 677, 811, 1585, 2244, 2356, 3564, 3660 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1146, 1178, 2396, 2428 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1368, 1400, 1966, 1998 |
| Alw21I | GWGCWC | 4 cut(s) | 405, 847, 991, 3129 |
| Alw26I | GTCTC | 5 cut(s) | 82, 404, 551, 2075, 3312 |
| Alw44I | GTGCAC | 1 cut(s) | 3125 |
| AlwI | GGATC | 4 cut(s) | 1571, 1778, 2531, 3437 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 413 |
| Ama87I | CYCGRG | 2 cut(s) | 2271, 2512 |
| AoxI | GGCC | 6 cut(s) | 896, 1657, 3272, 3538, 3567, 3673 |
| ApaI | GGGCCC | 1 cut(s) | 1661 |
| ApaLI | GTGCAC | 1 cut(s) | 3125 |
| ApeKI | GCWGC | 9 cut(s) | 287, 1013, 1693, 1817, 2063, 2345, 2348, 3242, 3382 |
| ApoI | RAATTY | 4 cut(s) | 628, 1338, 1405, 2184 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 914, 946 |
| AseI | ATTAAT | 1 cut(s) | 1626 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 333, 2584, 2650 |
| AspA2I | CCTAGG | 1 cut(s) | 1661 |
| AspLEI | GCGC | 1 cut(s) | 2508 |
| AsuC2I | CCSGG | 1 cut(s) | 2604 |
| AsuHPI | GGTGA | 9 cut(s) | 65, 243, 679, 962, 1866, 2297, 2671, 2990, 3639 |
| AsuII | TTCGAA | 1 cut(s) | 685 |
| AvaI | CYCGRG | 2 cut(s) | 2271, 2512 |
| AvaII | GGWCC | 8 cut(s) | 1766, 2027, 2106, 3092, 3391, 3485, 3634, 3658 |
| AvrII | CCTAGG | 1 cut(s) | 1661 |
| BaeGI | GKGCMC | 3 cut(s) | 1323, 1661, 3129 |
| BalI | TGGCCA | 1 cut(s) | 3569 |
| BanI | GGYRCC | 2 cut(s) | 1320, 1589 |
| BanII | GRGCYC | 2 cut(s) | 847, 1661 |
| BarI | GAAGNNNNNNTAC | 8 cut(s) | 945, 977, 1891, 1923, 2290, 2322, 3187, 3219 |
| BauI | CACGAG | 2 cut(s) | 2133, 3545 |
| BbrPI | CACGTG | 1 cut(s) | 164 |
| BbsI | GAAGAC | 4 cut(s) | 971, 1161, 2475, 2643 |
| Bbv12I | GWGCWC | 4 cut(s) | 405, 847, 991, 3129 |
| BbvCI | CCTCAGC | 2 cut(s) | 900, 3078 |
| BbvI | GCAGC | 9 cut(s) | 274, 1025, 1680, 1804, 2050, 2332, 2335, 3229, 3394 |
| BceAI | ACGGC | 3 cut(s) | 385, 3287, 3353 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2240, 2274 |
| BciT130I | CCWGG | 8 cut(s) | 124, 679, 813, 1587, 2246, 2358, 3566, 3662 |
| BclI | TGATCA | 2 cut(s) | 447, 777 |
| BcnI | CCSGG | 1 cut(s) | 2604 |
| BcoDI | GTCTC | 5 cut(s) | 82, 404, 551, 2075, 3312 |
| BfaI | CTAG | 7 cut(s) | 348, 992, 1632, 1662, 1770, 2090, 3147 |
| BfmI | CTRYAG | 2 cut(s) | 186, 1380 |
| BfoI | RGCGCY | 1 cut(s) | 2509 |
| BfuAI | ACCTGC | 2 cut(s) | 38, 2034 |
| BglII | AGATCT | 2 cut(s) | 47, 3151 |
| BlnI | CCTAGG | 1 cut(s) | 1661 |
| BlpI | GCTNAGC | 2 cut(s) | 531, 2262 |
| BmcAI | AGTACT | 2 cut(s) | 1796, 2325 |
| Bme1390I | CCNGG | 9 cut(s) | 124, 679, 813, 1587, 2246, 2358, 2604, 3566, 3662 |
| Bme18I | GGWCC | 8 cut(s) | 1766, 2027, 2106, 3092, 3391, 3485, 3634, 3658 |
| BmeT110I | CYCGRG | 2 cut(s) | 2271, 2512 |
| BmgBI | CACGTC | 1 cut(s) | 2195 |
| BmrFI | CCNGG | 9 cut(s) | 124, 679, 813, 1587, 2246, 2358, 2604, 3566, 3662 |
| BmrI | ACTGGG | 1 cut(s) | 1185 |
| BmsI | GCATC | 9 cut(s) | 163, 247, 427, 514, 1510, 1717, 1880, 3109, 3156 |
| BmuI | ACTGGG | 1 cut(s) | 1185 |
| BpiI | GAAGAC | 4 cut(s) | 971, 1161, 2475, 2643 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3570, 3602 |
| BpmI | CTGGAG | 5 cut(s) | 774, 1703, 1968, 2856, 3478 |
| Bpu10I | CCTNAGC | 3 cut(s) | 900, 1689, 3078 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 531, 2262 |
| Bpu14I | TTCGAA | 1 cut(s) | 685 |
| BpuEI | CTTGAG | 2 cut(s) | 2612, 2895 |
| BpuMI | CCSGG | 1 cut(s) | 2604 |
| Bsa29I | ATCGAT | 1 cut(s) | 2232 |
| BsaAI | YACGTR | 2 cut(s) | 137, 164 |
| BsaBI | GATNNNNATC | 2 cut(s) | 654, 3024 |
| BsaHI | GRCGYC | 1 cut(s) | 3512 |
| BsaI | GGTCTC | 1 cut(s) | 3312 |
| BsaWI | WCCGGW | 1 cut(s) | 2223 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 447, 477, 1966, 1996, 2829, 2859 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 472, 1586, 1666, 2103, 3213, 3503, 3536, 3571, 3631 |
| Bse1I | ACTGG | 7 cut(s) | 338, 791, 925, 1191, 1447, 1985, 2296 |
| Bse3DI | GCAATG | 1 cut(s) | 1239 |
| Bse8I | GATNNNNATC | 2 cut(s) | 654, 3024 |
| BseBI | CCWGG | 8 cut(s) | 124, 679, 813, 1587, 2246, 2358, 3566, 3662 |
| BseCI | ATCGAT | 1 cut(s) | 2232 |
| BseJI | GATNNNNATC | 2 cut(s) | 654, 3024 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 472, 1586, 1666, 2103, 3213, 3503, 3536, 3571, 3631 |
| BseMI | GCAATG | 1 cut(s) | 1239 |
| BseNI | ACTGG | 7 cut(s) | 338, 791, 925, 1191, 1447, 1985, 2296 |
| BseRI | GAGGAG | 7 cut(s) | 1866, 2343, 2500, 2922, 2925, 2940, 2976 |
| BseSI | GKGCMC | 3 cut(s) | 1323, 1661, 3129 |
| BseXI | GCAGC | 9 cut(s) | 274, 1025, 1680, 1804, 2050, 2332, 2335, 3229, 3394 |
| BsgI | GTGCAG | 2 cut(s) | 2870, 3453 |
| BshFI | GGCC | 6 cut(s) | 898, 1659, 3274, 3540, 3569, 3675 |
| BshNI | GGYRCC | 2 cut(s) | 1320, 1589 |
| BshVI | ATCGAT | 1 cut(s) | 2232 |
| BsiHKAI | GWGCWC | 4 cut(s) | 405, 847, 991, 3129 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2271, 2512 |
| BsiSI | CCGG | 2 cut(s) | 2224, 2603 |
| BslFI | GGGAC | 2 cut(s) | 836, 3404 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 472, 1586, 1666, 2103, 3213, 3503, 3536, 3571, 3631 |
| BsmAI | GTCTC | 5 cut(s) | 82, 404, 551, 2075, 3312 |
| BsmBI | CGTCTC | 1 cut(s) | 551 |
| BsmFI | GGGAC | 2 cut(s) | 836, 3404 |
| BsmI | GAATGC | 4 cut(s) | 187, 428, 2266, 3529 |
| BsnI | GGCC | 6 cut(s) | 898, 1659, 3274, 3540, 3569, 3675 |
| Bso31I | GGTCTC | 1 cut(s) | 3312 |
| BsoBI | CYCGRG | 2 cut(s) | 2271, 2512 |
| Bsp119I | TTCGAA | 1 cut(s) | 685 |
| Bsp120I | GGGCCC | 1 cut(s) | 1657 |
| Bsp1286I | GDGCHC | 6 cut(s) | 405, 847, 991, 1323, 1661, 3129 |
| Bsp1407I | TGTACA | 2 cut(s) | 1864, 2301 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 531, 2262 |
| Bsp19I | CCATGG | 1 cut(s) | 1597 |
| BspANI | GGCC | 6 cut(s) | 898, 1659, 3274, 3540, 3569, 3675 |
| BspDI | ATCGAT | 1 cut(s) | 2232 |
| BspHI | TCATGA | 2 cut(s) | 1053, 3415 |
| BspMAI | CTGCAG | 1 cut(s) | 1384 |
| BspMI | ACCTGC | 2 cut(s) | 38, 2034 |
| BspPI | GGATC | 4 cut(s) | 1571, 1778, 2531, 3437 |
| BspQI | GCTCTTC | 3 cut(s) | 40, 730, 1562 |
| BspT104I | TTCGAA | 1 cut(s) | 685 |
| BspT107I | GGYRCC | 2 cut(s) | 1320, 1589 |
| BspTNI | GGTCTC | 1 cut(s) | 3312 |
| BsrDI | GCAATG | 1 cut(s) | 1239 |
| BsrGI | TGTACA | 2 cut(s) | 1864, 2301 |
| BsrI | ACTGG | 7 cut(s) | 338, 791, 925, 1191, 1447, 1985, 2296 |
| BssNAI | GTATAC | 1 cut(s) | 3262 |
| BssNI | GRCGYC | 1 cut(s) | 3512 |
| BssSI | CACGAG | 2 cut(s) | 2133, 3545 |
| BssT1I | CCWWGG | 5 cut(s) | 636, 1597, 1661, 2109, 3570 |
| Bst1107I | GTATAC | 1 cut(s) | 3262 |
| Bst2BI | CACGAG | 2 cut(s) | 2133, 3545 |
| Bst2UI | CCWGG | 8 cut(s) | 124, 679, 813, 1587, 2246, 2358, 3566, 3662 |
| Bst6I | CTCTTC | 4 cut(s) | 40, 730, 1423, 1562 |
| BstACI | GRCGYC | 1 cut(s) | 3512 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2063 |
| BstAUI | TGTACA | 2 cut(s) | 1864, 2301 |
| BstBAI | YACGTR | 2 cut(s) | 137, 164 |
| BstBI | TTCGAA | 1 cut(s) | 685 |
| BstC8I | GCNNGC | 5 cut(s) | 1360, 2624, 2853, 3538, 3600 |
| BstDSI | CCRYGG | 4 cut(s) | 1597, 2330, 3335, 3589 |
| BstENI | CCTNNNNNAGG | 4 cut(s) | 1584, 2101, 3501, 3569 |
| BstH2I | RGCGCY | 1 cut(s) | 2509 |
| BstHHI | GCGC | 1 cut(s) | 2508 |
| BstMAI | GTCTC | 5 cut(s) | 82, 404, 551, 2075, 3312 |
| BstNI | CCWGG | 8 cut(s) | 124, 679, 813, 1587, 2246, 2358, 3566, 3662 |
| BstNSI | RCATGY | 3 cut(s) | 1101, 1814, 2626 |
| BstSCI | CCNGG | 9 cut(s) | 122, 677, 811, 1585, 2244, 2356, 2602, 3564, 3660 |
| BstSFI | CTRYAG | 2 cut(s) | 186, 1380 |
| BstSLI | GKGCMC | 3 cut(s) | 1323, 1661, 3129 |
| BstV1I | GCAGC | 9 cut(s) | 274, 1025, 1680, 1804, 2050, 2332, 2335, 3229, 3394 |
| BstV2I | GAAGAC | 4 cut(s) | 971, 1161, 2475, 2643 |
| BstX2I | RGATCY | 3 cut(s) | 47, 1576, 3151 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 932, 1331, 3668 |
| BstYI | RGATCY | 3 cut(s) | 47, 1576, 3151 |
| BstZ17I | GTATAC | 1 cut(s) | 3262 |
| Bsu15I | ATCGAT | 1 cut(s) | 2232 |
| BsuRI | GGCC | 6 cut(s) | 898, 1659, 3274, 3540, 3569, 3675 |
| BsuTUI | ATCGAT | 1 cut(s) | 2232 |
| BtgI | CCRYGG | 4 cut(s) | 1597, 2330, 3335, 3589 |
| BtgZI | GCGATG | 1 cut(s) | 2432 |
| BtrI | CACGTC | 1 cut(s) | 2195 |
| BtsI | GCAGTG | 4 cut(s) | 379, 2019, 2393, 3129 |
| BtsIMutI | CAGTG | 7 cut(s) | 379, 1295, 1642, 2019, 2393, 3033, 3129 |
| BveI | ACCTGC | 2 cut(s) | 38, 2034 |
| Cac8I | GCNNGC | 5 cut(s) | 1360, 2624, 2853, 3538, 3600 |
| CaiI | CAGNNNCTG | 1 cut(s) | 413 |
| CciI | TCATGA | 2 cut(s) | 1053, 3415 |
| CfoI | GCGC | 1 cut(s) | 2508 |
| ClaI | ATCGAT | 1 cut(s) | 2232 |
| CseI | GACGC | 2 cut(s) | 965, 3501 |
| Csp6I | GTAC | 6 cut(s) | 1440, 1583, 1795, 1865, 2302, 2324 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1221, 1256, 2319, 2354 |
| CviQI | GTAC | 6 cut(s) | 1440, 1583, 1795, 1865, 2302, 2324 |
| DraI | TTTAAA | 1 cut(s) | 3024 |
| DraIII | CACNNNGTG | 2 cut(s) | 3049, 3341 |
| EaeI | YGGCCR | 2 cut(s) | 3272, 3567 |
| Eam1104I | CTCTTC | 4 cut(s) | 40, 730, 1423, 1562 |
| EarI | CTCTTC | 4 cut(s) | 40, 730, 1423, 1562 |
| EciI | GGCGGA | 2 cut(s) | 3063, 3339 |
| Ecl136II | GAGCTC | 1 cut(s) | 845 |
| Eco130I | CCWWGG | 5 cut(s) | 636, 1597, 1661, 2109, 3570 |
| Eco147I | AGGCCT | 1 cut(s) | 898 |
| Eco24I | GRGCYC | 2 cut(s) | 847, 1661 |
| Eco31I | GGTCTC | 1 cut(s) | 3312 |
| Eco47I | GGWCC | 8 cut(s) | 1766, 2027, 2106, 3092, 3391, 3485, 3634, 3658 |
| Eco53kI | GAGCTC | 1 cut(s) | 845 |
| Eco57I | CTGAAG | 8 cut(s) | 333, 348, 767, 1038, 1161, 1586, 1872, 1913 |
| Eco72I | CACGTG | 1 cut(s) | 164 |
| Eco88I | CYCGRG | 2 cut(s) | 2271, 2512 |
| EcoICRI | GAGCTC | 1 cut(s) | 845 |
| EcoNI | CCTNNNNNAGG | 4 cut(s) | 1584, 2101, 3501, 3569 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1657, 1658, 1766 |
| EcoRII | CCWGG | 8 cut(s) | 122, 677, 811, 1585, 2244, 2356, 3564, 3660 |
| EcoT14I | CCWWGG | 5 cut(s) | 636, 1597, 1661, 2109, 3570 |
| EcoT38I | GRGCYC | 2 cut(s) | 847, 1661 |
| ErhI | CCWWGG | 5 cut(s) | 636, 1597, 1661, 2109, 3570 |
| Esp3I | CGTCTC | 1 cut(s) | 551 |
| FaqI | GGGAC | 2 cut(s) | 836, 3404 |
| FauI | CCCGC | 2 cut(s) | 2627, 2734 |
| FauNDI | CATATG | 2 cut(s) | 266, 2454 |
| FbaI | TGATCA | 2 cut(s) | 447, 777 |
| FblI | GTMKAC | 1 cut(s) | 3261 |
| FriOI | GRGCYC | 2 cut(s) | 847, 1661 |
| FspBI | CTAG | 7 cut(s) | 348, 992, 1632, 1662, 1770, 2090, 3147 |
| GlaI | GCGC | 1 cut(s) | 2507 |
| GsuI | CTGGAG | 5 cut(s) | 774, 1703, 1968, 2856, 3478 |
| HaeII | RGCGCY | 1 cut(s) | 2509 |
| HaeIII | GGCC | 6 cut(s) | 898, 1659, 3274, 3540, 3569, 3675 |
| HapII | CCGG | 2 cut(s) | 2224, 2603 |
| HgaI | GACGC | 2 cut(s) | 965, 3501 |
| HhaI | GCGC | 1 cut(s) | 2508 |
| Hin1I | GRCGYC | 1 cut(s) | 3512 |
| Hin6I | GCGC | 1 cut(s) | 2506 |
| HinP1I | GCGC | 1 cut(s) | 2506 |
| HincII | GTYRAC | 1 cut(s) | 2809 |
| HindII | GTYRAC | 1 cut(s) | 2809 |
| HpaII | CCGG | 2 cut(s) | 2224, 2603 |
| HphI | GGTGA | 9 cut(s) | 65, 243, 679, 962, 1866, 2297, 2671, 2990, 3639 |
| Hpy166II | GTNNAC | 6 cut(s) | 1637, 2304, 2809, 3127, 3262, 3550 |
| Hpy8I | GTNNAC | 6 cut(s) | 1637, 2304, 2809, 3127, 3262, 3550 |
| Hpy99I | CGWCG | 2 cut(s) | 2800, 3295 |
| HpyCH4IV | ACGT | 3 cut(s) | 136, 163, 2194 |
| HpySE526I | ACGT | 3 cut(s) | 136, 163, 2194 |
| Hsp92I | GRCGYC | 1 cut(s) | 3512 |
| HspAI | GCGC | 1 cut(s) | 2506 |
| Ksp22I | TGATCA | 2 cut(s) | 447, 777 |
| LguI | GCTCTTC | 3 cut(s) | 40, 730, 1562 |
| LmnI | GCTCC | 9 cut(s) | 842, 1213, 1684, 2356, 2513, 2797, 3289, 3439, 3532 |
| Lsp1109I | GCAGC | 9 cut(s) | 274, 1025, 1680, 1804, 2050, 2332, 2335, 3229, 3394 |
| LweI | GCATC | 9 cut(s) | 163, 247, 427, 514, 1510, 1717, 1880, 3109, 3156 |
| MaeI | CTAG | 7 cut(s) | 348, 992, 1632, 1662, 1770, 2090, 3147 |
| MaeII | ACGT | 3 cut(s) | 136, 163, 2194 |
| MaeIII | GTNAC | 7 cut(s) | 53, 376, 514, 1034, 1102, 2677, 3645 |
| MfeI | CAATTG | 2 cut(s) | 805, 2256 |
| MflI | RGATCY | 3 cut(s) | 47, 1576, 3151 |
| MhlI | GDGCHC | 6 cut(s) | 405, 847, 991, 1323, 1661, 3129 |
| MlsI | TGGCCA | 1 cut(s) | 3569 |
| MluNI | TGGCCA | 1 cut(s) | 3569 |
| MlyI | GAGTC | 6 cut(s) | 818, 1151, 2219, 2444, 2847, 3152 |
| MmeI | TCCRAC | 3 cut(s) | 1811, 2160, 2394 |
| Mox20I | TGGCCA | 1 cut(s) | 3569 |
| MroXI | GAANNNNTTC | 3 cut(s) | 333, 2584, 2650 |
| MscI | TGGCCA | 1 cut(s) | 3569 |
| MseI | TTAA | 8 cut(s) | 224, 279, 1299, 1449, 1626, 3023, 3102, 3312 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1329 |
| Msp20I | TGGCCA | 1 cut(s) | 3569 |
| MspA1I | CMGCKG | 2 cut(s) | 1016, 2345 |
| MspI | CCGG | 2 cut(s) | 2224, 2603 |
| MspR9I | CCNGG | 9 cut(s) | 124, 679, 813, 1587, 2246, 2358, 2604, 3566, 3662 |
| MunI | CAATTG | 2 cut(s) | 805, 2256 |
| Mva1269I | GAATGC | 4 cut(s) | 187, 428, 2266, 3529 |
| MvaI | CCWGG | 8 cut(s) | 124, 679, 813, 1587, 2246, 2358, 3566, 3662 |
| NciI | CCSGG | 1 cut(s) | 2604 |
| NcoI | CCATGG | 1 cut(s) | 1597 |
| NdeI | CATATG | 2 cut(s) | 266, 2454 |
| NmuCI | GTSAC | 3 cut(s) | 53, 2677, 3645 |
| NspI | RCATGY | 3 cut(s) | 1101, 1814, 2626 |
| NspV | TTCGAA | 1 cut(s) | 685 |
| PaeI | GCATGC | 1 cut(s) | 2626 |
| PaeR7I | CTCGAG | 2 cut(s) | 2271, 2512 |
| PagI | TCATGA | 2 cut(s) | 1053, 3415 |
| PceI | AGGCCT | 1 cut(s) | 898 |
| PciI | ACATGT | 1 cut(s) | 1810 |
| PciSI | GCTCTTC | 3 cut(s) | 40, 730, 1562 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2131, 2455 |
| PctI | GAATGC | 4 cut(s) | 187, 428, 2266, 3529 |
| PdmI | GAANNNNTTC | 3 cut(s) | 333, 2584, 2650 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3536 |
| PfoI | TCCNGGA | 4 cut(s) | 122, 2356, 2602, 3660 |
| PleI | GAGTC | 6 cut(s) | 818, 1151, 2218, 2443, 2846, 3151 |
| PmaCI | CACGTG | 1 cut(s) | 164 |
| PmlI | CACGTG | 1 cut(s) | 164 |
| PpsI | GAGTC | 6 cut(s) | 818, 1151, 2218, 2443, 2846, 3151 |
| Ppu21I | YACGTR | 2 cut(s) | 137, 164 |
| PpuMI | RGGWCCY | 1 cut(s) | 1766 |
| PscI | ACATGT | 1 cut(s) | 1810 |
| PshBI | ATTAAT | 1 cut(s) | 1626 |
| Psp124BI | GAGCTC | 1 cut(s) | 847 |
| Psp5II | RGGWCCY | 1 cut(s) | 1766 |
| Psp6I | CCWGG | 8 cut(s) | 122, 677, 811, 1585, 2244, 2356, 3564, 3660 |
| PspCI | CACGTG | 1 cut(s) | 164 |
| PspGI | CCWGG | 8 cut(s) | 122, 677, 811, 1585, 2244, 2356, 3564, 3660 |
| PspOMI | GGGCCC | 1 cut(s) | 1657 |
| PspPPI | RGGWCCY | 1 cut(s) | 1766 |
| PstI | CTGCAG | 1 cut(s) | 1384 |
| PstNI | CAGNNNCTG | 1 cut(s) | 413 |
| PsuI | RGATCY | 3 cut(s) | 47, 1576, 3151 |
| PvuII | CAGCTG | 1 cut(s) | 1016 |
| RsaI | GTAC | 6 cut(s) | 1441, 1584, 1796, 1866, 2303, 2325 |
| RsaNI | GTAC | 6 cut(s) | 1440, 1583, 1795, 1865, 2302, 2324 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1329 |
| SacI | GAGCTC | 1 cut(s) | 847 |
| SapI | GCTCTTC | 3 cut(s) | 40, 730, 1562 |
| SaqAI | TTAA | 8 cut(s) | 224, 279, 1299, 1449, 1626, 3023, 3102, 3312 |
| ScaI | AGTACT | 2 cut(s) | 1796, 2325 |
| SchI | GAGTC | 6 cut(s) | 818, 1151, 2219, 2444, 2847, 3152 |
| ScrFI | CCNGG | 9 cut(s) | 124, 679, 813, 1587, 2246, 2358, 2604, 3566, 3662 |
| SduI | GDGCHC | 6 cut(s) | 405, 847, 991, 1323, 1661, 3129 |
| SfaNI | GCATC | 9 cut(s) | 163, 247, 427, 514, 1510, 1717, 1880, 3109, 3156 |
| SfcI | CTRYAG | 2 cut(s) | 186, 1380 |
| Sfr274I | CTCGAG | 2 cut(s) | 2271, 2512 |
| SfuI | TTCGAA | 1 cut(s) | 685 |
| SinI | GGWCC | 8 cut(s) | 1766, 2027, 2106, 3092, 3391, 3485, 3634, 3658 |
| SlaI | CTCGAG | 2 cut(s) | 2271, 2512 |
| SmiI | ATTTAAAT | 1 cut(s) | 3024 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1329 |
| SmlI | CTYRAG | 4 cut(s) | 2271, 2512, 2627, 2910 |
| SmoI | CTYRAG | 4 cut(s) | 2271, 2512, 2627, 2910 |
| SphI | GCATGC | 1 cut(s) | 2626 |
| SseBI | AGGCCT | 1 cut(s) | 898 |
| SspI | AATATT | 3 cut(s) | 856, 1924, 3223 |
| SspMI | CTAG | 7 cut(s) | 348, 992, 1632, 1662, 1770, 2090, 3147 |
| SstI | GAGCTC | 1 cut(s) | 847 |
| StuI | AGGCCT | 1 cut(s) | 898 |
| StyD4I | CCNGG | 9 cut(s) | 122, 677, 811, 1585, 2244, 2356, 2602, 3564, 3660 |
| StyI | CCWWGG | 5 cut(s) | 636, 1597, 1661, 2109, 3570 |
| SwaI | ATTTAAAT | 1 cut(s) | 3024 |
| TaiI | ACGT | 3 cut(s) | 139, 166, 2197 |
| TaqII | GACCGA | 1 cut(s) | 3408 |
| TatI | WGTACW | 4 cut(s) | 1794, 1864, 2301, 2323 |
| TauI | GCSGC | 3 cut(s) | 530, 3624, 3675 |
| Tru1I | TTAA | 8 cut(s) | 224, 279, 1299, 1449, 1626, 3023, 3102, 3312 |
| Tru9I | TTAA | 8 cut(s) | 224, 279, 1299, 1449, 1626, 3023, 3102, 3312 |
| TscAI | CASTG | 7 cut(s) | 379, 1295, 1649, 2019, 2393, 3040, 3129 |
| TseFI | GTSAC | 3 cut(s) | 53, 2677, 3645 |
| TseI | GCWGC | 9 cut(s) | 287, 1013, 1693, 1817, 2063, 2345, 2348, 3242, 3382 |
| Tsp45I | GTSAC | 3 cut(s) | 53, 2677, 3645 |
| TspGWI | ACGGA | 6 cut(s) | 143, 160, 259, 1285, 2592, 2784 |
| TspRI | CASTG | 7 cut(s) | 379, 1295, 1649, 2019, 2393, 3040, 3129 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3536 |
| VneI | GTGCAC | 1 cut(s) | 3125 |
| VpaK11BI | GGWCC | 8 cut(s) | 1766, 2027, 2106, 3092, 3391, 3485, 3634, 3658 |
| VspI | ATTAAT | 1 cut(s) | 1626 |
| XagI | CCTNNNNNAGG | 4 cut(s) | 1584, 2101, 3501, 3569 |
| XapI | RAATTY | 4 cut(s) | 628, 1338, 1405, 2184 |
| XbaI | TCTAGA | 2 cut(s) | 991, 3146 |
| XceI | RCATGY | 3 cut(s) | 1101, 1814, 2626 |
| XhoI | CTCGAG | 2 cut(s) | 2271, 2512 |
| XmaJI | CCTAGG | 1 cut(s) | 1661 |
| XmiI | GTMKAC | 1 cut(s) | 3261 |
| XmnI | GAANNNNTTC | 3 cut(s) | 333, 2584, 2650 |
| XspI | CTAG | 7 cut(s) | 348, 992, 1632, 1662, 1770, 2090, 3147 |
| ZrmI | AGTACT | 2 cut(s) | 1796, 2325 |