Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005320

Physical Location & Seq

Genomic Coordinates Reverse (-)

54634331 .. 54642090

Gene Structure 7760 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26158

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3048 bp

ATGGCGCCTAGCAGGAGGAAAGGAGCTAGCAAAGCCGCTCAGGCCGCCGCGGCTCGCCGCCAGTGGAAGGTCGGCGATCTTGTGCTTGCTAAAGTCAAAGGGTTCCCTGCTTGGCCTGCTACGGTAAGTGAGCCGGAGAAGTGGGGTTACTCTGCTGATTGGAAGAAAGTACTCGTTTTCTTCTTTGGAACACAACAGATTGCTTTCTGCAACCCTGCTGATGTTGAGGCATTTACAGAGGAGAAGAAACAGTCTCTTCTCGGAAAGCGTCATGGGAAGGGTGCTGATTTTGTTCGTGCAGTCCAGGAGATTATTGATAGTTTTGAGAAGTTGAAGAAAGAGGACCAGGTTGATGAGTTAAACTCTAGTGCAAATGGTGGGAACTCAGTCGATTCTTCATGCAATTTTGGTTCAAAGGATCAGAAAGAAGCTCCTGAAGCAATTCTTGATTTATGTCCAAAATCTTCGTCTTCTACCATTGATAAAAATGAGCCAAGTAATTCTATTGAGGATGCTTCGGCTACTGCACTAGTAGATGCCACCCTTAATAAGGAGGACTTAATTGAGGAACCTGCTGCTACCACAATGGTTTCTGAAACACCTGTGCCGATAACCTGCTCTTCAAGAAAAAGATCTGGTGACTTGCGATTACAGAGCTGTGTCTCAAAGAGAGAGGAAGCACCAGCTCGTAGGTCAAGAAGCTCATCCAGGACGGAATCACGTAAATTACGGAACTTCATAATGCCACATGATGATGATGCCAAGAATGCTGTAGATATATCTGGTAATGCAGTTCAGGACAGAAGTTTAAGAAGGAATAAACGAACACGGAAATCACCTGATGCCTCCATATGTGATGATGTTAAATTGGCTGCTTGTGTTTCAAATGGTTGTGCTGAAGATGATGGTTCTGAAGTTGTTCCAGTTGATTCTAGCACATTTAGTTTGAACGACGGCAGTGTTACTGATTCTGGTTGTAAAGGAGAGCACTCAGAGACTGTTGTTGAATGCTTGGAAGGAGATGCTGAGTTGATCAAAGGACTTGATCTCCAAATAAAGGCTTTTAGTAAGAAGAAAAGGAAACCAAACAGAAAGCGAGTTACTAATGATGCAGCTGAGCCTATTGCTATATTGGACAAGGAGACGGTTCAAGATGTTGGTTTGCAGAGCAGTAGTCAAAGTATGCAGACTGATGGTGGAAATATGAATGGAAATTTATCCAAGGAAGATGGAGATGAACATCTGCCATTGGTGAAACGAGCCAGGGTTCGAATGAATAAACCATCTTCTGTTGAGGAAGTTGATAGCTCTTCGCACATTCAAGAAAGTCTGAAGGAAGTCATGCTCAATCCATCAGGGCTGATCAATACATCTCCAGTATGTGATGACAATTGCCCTGGTGGTCGGGACTCATTTGTGGTAAATGGAGCTCTAAGTAATATTACACCTTCAAGAGTTTGCACTCAAAGTTTGGAGAATAGGCCTCAGCTTTGGAACTCGAAGAAAGACCAGTCTTTTGGTTGTTCGGCTGATGGTGAAGCTGTTTTACCTCCATCTAAGCGTCTTCATCGTGCTCTAGAAGCCATGTCAGCTAATGCAGCTGAAGATGATGAAAGATGTAACTATGATTCATCAGCCATGAGGACATCTGCTATTGATTGTCATAATTCTTGCATGAACACATGCGTTACTATAACTGTGGAAAGTAATTCAGGGAATGGTCTGGGTCTGCATAGTGATGACTCTTTTGGCAATAATGCTTCAGGGTTCTCTACCAGTCCAAACCGTGTAATCTTGGAGCAAAATACTAAATCAGCAATGGAAGTGGATGTATGTGATCAAAGAAGGAATAGTCCTGATAATCAGAATAATCAGTGTTCCGTTAATGGTTTCATAGATTCTGGGCACCATGTTGGTGGTAAAATTCTTTGTGCTGGTTCTGCTGGCTGTTGCACTATTGGAACTGCAGTTCAGACTGAAAGTCCAGGGAATTTATCACATAGTATGGAGAGAAGAGATGCTGTTACTGGATTTAATCAAGGTTCAATAGATGCGTTTCCTCGGAAAGATGAAGGTCATGCAATAATTGAATCAAGCAATAAAGATGCAGAAAATCCTGATACTGATTGTGATACTTTAGAGCATACTCTGAAGAGCTTAGATCCTGTACCAGGCACCGGCCATGGATTTGTTGAAGTTCCACGTCAAATTAATGCTAGTCCACCTCACTGTGGTGCAAAGGGCCCTAGGGAGGACATCAATTCTCTGGAGCCTGAGCTGCAAGAGAACAGAGATGTAAAAGACGTAATGGATGCTGTAAAAGAGGTCAAGCATAAACAAATAGAGAAGGGTCCTAGTTCAGTTTCCGATCCAACTGAGTACTTGACTGAAAAACATGTTGCTGGTGTGCGGTCAAGTCCGTCCCTAACAGATGGTGGAGATTCTCTTGCACAAGCATCACCTCCTAATACTTCAGGCTGTCGTATTTCTACTTCTGATAGTAGTAATATTCTTCAGAACAATGGCAGTTGTAGTCCTGATGTTGATATGCACAAGAGAACATCTACTCCAGTTGATGAGGATGAAAACTCAGAAGCAGTGGTTTGTCAAAGACCAAAATCTGTGAGCAGGTATGCAGAAGCACTTGCTGCTCTGTCATCCTTTGAGACAATGCTAGGAACCTTGACAAGGACCAAGGACAGCATTGGTCGAGCAACTCGTGTAGCTATCGACTGTGGAAAGATTGGTGTAGCTTCTAAGGCGTTGGAAATTCTGGCACGTCATTTGGAAAATGAGTCGAGCTTACACCGGAGAATCGATTTATTTTTCCTGGTCGATTCAATTGCTCAGCATTCTCGAGGTTTGAAAGGTGATACTGGTGGTATGTACACTTCTGCAATCCAAGCAGTACTACCACGGTTATTGTCCGCTGCTGCTCCTCCTGGAAGTTCAGCGAATGAGAATCGTAGGCAATGTCTAAAGGCAAGCACAATTTTTATTTATTATTATTATTATTATTTTTTAAAGGGGGAGGAGGGGGTGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CTD_bind GSHPx PWWP

Protein Analysis

1015

Amino Acids

109.5

Weight (kDa)

5.46

Isoelectric Point (pI)

57.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWWP	PF00855	25 - 108	6.2e-18	PWWP domain
CID	PF04818	887 - 988	5.8e-08	CID domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48160 AT2G48160 AT3G63070
fragaria_vesca	FvH4_2g23910 FvH4_2g23910 FvH4_2g23910
malus_domestica	MD03G1268600.v1.1 MD11G1289400.v1.1
prunus_persica	Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1 Prupe.8G244400_v2.0.a1
pyrus_communis	pycom11g25680
rosa_chinensis	RchiOBHm_Chr6g0291521 RchiOBHm_Chr6g0291531
rosa_laevigata	RLG00000012109
rosa_multiflora	Rmu_co8000626.1_g000001 Rmu_co8259725.1_g000001 Rmu_co8294861.1_g000001 Rmu_sc0012363.1_g000001 Rmu_sc0024207.1_g000004
rosa_roxburghii	Rroxscaffold_6G00405040 Rroxscaffold_7G00175990
rosa_rugosa	Rorug06G0220200
rosa_samantha	Rh6AG332300 Rh6BG339200 Rh6CG345400 Rh6DG332800
rosa_wichuraiana	Rw6G028860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	580, 623, 2619
AccB1I	GGYRCC	3 cut(s)	4, 1905, 2174
AccBSI	CCGCTC	1 cut(s)	38
AccII	CGCG	1 cut(s)	50
AciI	CCGC	7 cut(s)	36, 45, 48, 50, 58, 2410, 2928
AclWI	GGATC	3 cut(s)	426, 2156, 2363
AcoI	YGGCCR	1 cut(s)	2179
AcsI	RAATTY	4 cut(s)	1213, 1923, 1990, 2769
AcuI	CTGAAG	9 cut(s)	456, 918, 933, 1352, 1623, 1746, 2171, 2457, 2498
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	5 cut(s)	171, 2169, 2381, 2888, 2910
AfiI	CCNNNNNNNGG	8 cut(s)	67, 550, 1057, 2171, 2177, 2231, 2251, 2688
AflIII	ACRYGT	1 cut(s)	2395
AhdI	GACNNNNNGTC	1 cut(s)	1980
AhlI	ACTAGT	1 cut(s)	529
AjiI	CACGTC	2 cut(s)	2204, 2780
AjnI	CCWGG	9 cut(s)	303, 345, 707, 1262, 1396, 1984, 2170, 2829, 2941
AleI	CACNNNNGTG	1 cut(s)	2232
AloI	GAACNNNNNNTCC	4 cut(s)	1953, 1985, 2551, 2583
Alw21I	GWGCWC	3 cut(s)	990, 1432, 1576
Alw26I	GTCTC	5 cut(s)	258, 667, 989, 1136, 2660
AlwI	GGATC	3 cut(s)	426, 2156, 2363
AlwNI	CAGNNNCTG	1 cut(s)	998
Ama87I	CYCGRG	1 cut(s)	2856
AoxI	GGCC	5 cut(s)	42, 113, 1481, 2179, 2242
ApaI	GGGCCC	1 cut(s)	2246
ApeKI	GCWGC	8 cut(s)	575, 872, 1112, 1598, 2278, 2648, 2930, 2933
ApoI	RAATTY	4 cut(s)	1213, 1923, 1990, 2769
ArsI	GACNNNNNNTTYG	4 cut(s)	452, 484, 1499, 1531
AseI	ATTAAT	1 cut(s)	2211
Asp700I	GAANNNNTTC	2 cut(s)	441, 918
AspA2I	CCTAGG	1 cut(s)	2246
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	5 cut(s)	343, 2242, 2243, 2351, 2691
AsuHPI	GGTGA	6 cut(s)	650, 828, 1264, 1547, 2451, 2882
AsuII	TTCGAA	1 cut(s)	1270
AsuNHI	GCTAGC	1 cut(s)	26
AvaI	CYCGRG	1 cut(s)	2856
AvaII	GGWCC	3 cut(s)	343, 2351, 2691
AvrII	CCTAGG	1 cut(s)	2246
BaeGI	GKGCMC	2 cut(s)	1908, 2246
BanI	GGYRCC	3 cut(s)	4, 1905, 2174
BanII	GRGCYC	2 cut(s)	1432, 2246
BarI	GAAGNNNNNNTAC	8 cut(s)	131, 163, 1530, 1562, 2476, 2508, 2875, 2907
BauI	CACGAG	1 cut(s)	2718
BbsI	GAAGAC	2 cut(s)	462, 1556
Bbv12I	GWGCWC	3 cut(s)	990, 1432, 1576
BbvCI	CCTCAGC	1 cut(s)	1485
BbvI	GCAGC	8 cut(s)	562, 859, 1124, 1610, 2265, 2635, 2917, 2920
BccI	CCATC	8 cut(s)	899, 1187, 1223, 1291, 1360, 1526, 1561, 2426
BceAI	ACGGC	1 cut(s)	970
BcgI	CGANNNNNNTGC	2 cut(s)	2825, 2859
BciT130I	CCWGG	9 cut(s)	305, 347, 709, 1264, 1398, 1986, 2172, 2831, 2943
BclI	TGATCA	3 cut(s)	1032, 1362, 1837
BcoDI	GTCTC	5 cut(s)	258, 667, 989, 1136, 2660
BcuI	ACTAGT	1 cut(s)	529
BfmI	CTRYAG	2 cut(s)	771, 1965
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	3 cut(s)	580, 623, 2619
BglI	GCCNNNNNGGC	2 cut(s)	41, 50
BglII	AGATCT	1 cut(s)	632
BlnI	CCTAGG	1 cut(s)	2246
BlpI	GCTNAGC	2 cut(s)	1116, 2847
BmcAI	AGTACT	3 cut(s)	171, 2381, 2910
Bme1390I	CCNGG	9 cut(s)	305, 347, 709, 1264, 1398, 1986, 2172, 2831, 2943
Bme18I	GGWCC	3 cut(s)	343, 2351, 2691
BmeRI	GACNNNNNGTC	1 cut(s)	1980
BmeT110I	CYCGRG	1 cut(s)	2856
BmgBI	CACGTC	2 cut(s)	2204, 2780
BmgT120I	GGNCC	5 cut(s)	343, 2242, 2243, 2351, 2691
BmiI	GGNNCC	9 cut(s)	6, 104, 570, 1907, 2176, 2244, 2271, 2352, 2680
BmrFI	CCNGG	9 cut(s)	305, 347, 709, 1264, 1398, 1986, 2172, 2831, 2943
BmtI	GCTAGC	1 cut(s)	30
BpiI	GAAGAC	2 cut(s)	462, 1556
BplI	GAGNNNNNCTC	2 cut(s)	347, 379
BpmI	CTGGAG	3 cut(s)	1359, 2288, 2553
Bpu10I	CCTNAGC	3 cut(s)	39, 1485, 2274
Bpu1102I	GCTNAGC	2 cut(s)	1116, 2847
Bpu14I	TTCGAA	1 cut(s)	1270
Bsa29I	ATCGAT	1 cut(s)	2817
BsaAI	YACGTR	1 cut(s)	722
BsaBI	GATNNNNATC	1 cut(s)	1239
BsaHI	GRCGYC	1 cut(s)	5
BsaWI	WCCGGW	1 cut(s)	2808
BsaXI	ACNNNNNCTCC	5 cut(s)	1032, 1062, 2551, 2581, 3026
Bsc4I	CCNNNNNNNGG	8 cut(s)	67, 550, 1057, 2171, 2177, 2231, 2251, 2688
Bse118I	RCCGGY	1 cut(s)	2177
Bse1I	ACTGG	8 cut(s)	61, 923, 1376, 1510, 1776, 2032, 2570, 2881
Bse3DI	GCAATG	2 cut(s)	1824, 2978
Bse8I	GATNNNNATC	1 cut(s)	1239
BseBI	CCWGG	9 cut(s)	305, 347, 709, 1264, 1398, 1986, 2172, 2831, 2943
BseCI	ATCGAT	1 cut(s)	2817
BseGI	GGATG	6 cut(s)	517, 704, 1834, 2317, 2587, 2657
BseJI	GATNNNNATC	1 cut(s)	1239
BseLI	CCNNNNNNNGG	8 cut(s)	67, 550, 1057, 2171, 2177, 2231, 2251, 2688
BseMI	GCAATG	2 cut(s)	1824, 2978
BseNI	ACTGG	8 cut(s)	61, 923, 1376, 1510, 1776, 2032, 2570, 2881
BseRI	GAGGAG	3 cut(s)	254, 2928, 3047
BseSI	GKGCMC	2 cut(s)	1908, 2246
BseXI	GCAGC	8 cut(s)	562, 859, 1124, 1610, 2265, 2635, 2917, 2920
BsgI	GTGCAG	2 cut(s)	318, 510
Bsh1236I	CGCG	1 cut(s)	50
BshFI	GGCC	5 cut(s)	44, 115, 1483, 2181, 2244
BshNI	GGYRCC	3 cut(s)	4, 1905, 2174
BshVI	ATCGAT	1 cut(s)	2817
BsiHKAI	GWGCWC	3 cut(s)	990, 1432, 1576
BsiHKCI	CYCGRG	1 cut(s)	2856
BsiSI	CCGG	3 cut(s)	134, 2178, 2809
BslFI	GGGAC	2 cut(s)	1421, 2407
BslI	CCNNNNNNNGG	8 cut(s)	67, 550, 1057, 2171, 2177, 2231, 2251, 2688
BsmAI	GTCTC	5 cut(s)	258, 667, 989, 1136, 2660
BsmBI	CGTCTC	1 cut(s)	1136
BsmFI	GGGAC	2 cut(s)	1421, 2407
BsmI	GAATGC	3 cut(s)	772, 1013, 2851
BsnI	GGCC	5 cut(s)	44, 115, 1483, 2181, 2244
BsoBI	CYCGRG	1 cut(s)	2856
Bsp119I	TTCGAA	1 cut(s)	1270
Bsp120I	GGGCCC	1 cut(s)	2242
Bsp1286I	GDGCHC	5 cut(s)	990, 1432, 1576, 1908, 2246
Bsp1407I	TGTACA	1 cut(s)	2886
Bsp143I	GATC	9 cut(s)	76, 418, 632, 1032, 1045, 1362, 1837, 2161, 2368
Bsp1720I	GCTNAGC	2 cut(s)	1116, 2847
Bsp19I	CCATGG	1 cut(s)	2182
BspACI	CCGC	7 cut(s)	36, 45, 48, 50, 58, 2410, 2928
BspANI	GGCC	5 cut(s)	44, 115, 1483, 2181, 2244
BspDI	ATCGAT	1 cut(s)	2817
BspFNI	CGCG	1 cut(s)	50
BspLI	GGNNCC	9 cut(s)	6, 104, 570, 1907, 2176, 2244, 2271, 2352, 2680
BspMAI	CTGCAG	1 cut(s)	1969
BspMI	ACCTGC	3 cut(s)	580, 623, 2619
BspOI	GCTAGC	1 cut(s)	30
BspPI	GGATC	3 cut(s)	426, 2156, 2363
BspQI	GCTCTTC	3 cut(s)	625, 1315, 2147
BspT104I	TTCGAA	1 cut(s)	1270
BspT107I	GGYRCC	3 cut(s)	4, 1905, 2174
BsrBI	CCGCTC	1 cut(s)	38
BsrDI	GCAATG	2 cut(s)	1824, 2978
BsrFI	RCCGGY	1 cut(s)	2177
BsrGI	TGTACA	1 cut(s)	2886
BsrI	ACTGG	8 cut(s)	61, 923, 1376, 1510, 1776, 2032, 2570, 2881
BssAI	RCCGGY	1 cut(s)	2177
BssMI	GATC	9 cut(s)	76, 418, 632, 1032, 1045, 1362, 1837, 2161, 2368
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	2718
BssT1I	CCWWGG	4 cut(s)	1221, 2182, 2246, 2694
Bst2BI	CACGAG	1 cut(s)	2718
Bst2UI	CCWGG	9 cut(s)	305, 347, 709, 1264, 1398, 1986, 2172, 2831, 2943
Bst4CI	ACNGT	9 cut(s)	124, 252, 1000, 1147, 1699, 1787, 2231, 2735, 2919
Bst6I	CTCTTC	5 cut(s)	261, 625, 1315, 2008, 2147
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	2648
BstAUI	TGTACA	1 cut(s)	2886
BstBAI	YACGTR	1 cut(s)	722
BstBI	TTCGAA	1 cut(s)	1270
BstC8I	GCNNGC	6 cut(s)	28, 55, 87, 117, 1945, 2986
BstDSI	CCRYGG	3 cut(s)	48, 2182, 2915
BstENI	CCTNNNNNAGG	3 cut(s)	548, 2169, 2686
BstF5I	GGATG	6 cut(s)	517, 704, 1834, 2317, 2587, 2657
BstFNI	CGCG	1 cut(s)	50
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstKTI	GATC	9 cut(s)	79, 421, 635, 1035, 1048, 1365, 1840, 2164, 2371
BstMAI	GTCTC	5 cut(s)	258, 667, 989, 1136, 2660
BstMBI	GATC	9 cut(s)	76, 418, 632, 1032, 1045, 1362, 1837, 2161, 2368
BstNI	CCWGG	9 cut(s)	305, 347, 709, 1264, 1398, 1986, 2172, 2831, 2943
BstNSI	RCATGY	2 cut(s)	1686, 2399
BstSCI	CCNGG	9 cut(s)	303, 345, 707, 1262, 1396, 1984, 2170, 2829, 2941
BstSFI	CTRYAG	2 cut(s)	771, 1965
BstSLI	GKGCMC	2 cut(s)	1908, 2246
BstUI	CGCG	1 cut(s)	50
BstV1I	GCAGC	8 cut(s)	562, 859, 1124, 1610, 2265, 2635, 2917, 2920
BstV2I	GAAGAC	2 cut(s)	462, 1556
BstX2I	RGATCY	2 cut(s)	632, 2161
BstXI	CCANNNNNNTGG	2 cut(s)	1517, 1916
BstYI	RGATCY	2 cut(s)	632, 2161
Bsu15I	ATCGAT	1 cut(s)	2817
BsuRI	GGCC	5 cut(s)	44, 115, 1483, 2181, 2244
BsuTUI	ATCGAT	1 cut(s)	2817
BtgI	CCRYGG	3 cut(s)	48, 2182, 2915
BtrI	CACGTC	2 cut(s)	2204, 2780
BtsCI	GGATG	6 cut(s)	517, 704, 1834, 2317, 2587, 2657
BtsI	GCAGTG	2 cut(s)	964, 2604
BtsIMutI	CAGTG	5 cut(s)	68, 964, 1880, 2227, 2604
BveI	ACCTGC	3 cut(s)	580, 623, 2619
Cac8I	GCNNGC	6 cut(s)	28, 55, 87, 117, 1945, 2986
CaiI	CAGNNNCTG	1 cut(s)	998
CfoI	GCGC	1 cut(s)	7
Cfr10I	RCCGGY	1 cut(s)	2177
Cfr13I	GGNCC	5 cut(s)	343, 2242, 2243, 2351, 2691
Cfr42I	CCGCGG	1 cut(s)	51
ClaI	ATCGAT	1 cut(s)	2817
CseI	GACGC	2 cut(s)	257, 1550
CsiI	ACCWGGT	1 cut(s)	345
Csp6I	GTAC	5 cut(s)	170, 2168, 2380, 2887, 2909
CspCI	CAANNNNNGTGG	4 cut(s)	1806, 1841, 2904, 2939
CviQI	GTAC	5 cut(s)	170, 2168, 2380, 2887, 2909
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	9 cut(s)	78, 420, 634, 1034, 1047, 1364, 1839, 2163, 2370
DpnII	GATC	9 cut(s)	76, 418, 632, 1032, 1045, 1362, 1837, 2161, 2368
DraI	TTTAAA	1 cut(s)	3024
DriI	GACNNNNNGTC	1 cut(s)	1980
EaeI	YGGCCR	1 cut(s)	2179
Eam1104I	CTCTTC	5 cut(s)	261, 625, 1315, 2008, 2147
Eam1105I	GACNNNNNGTC	1 cut(s)	1980
EarI	CTCTTC	5 cut(s)	261, 625, 1315, 2008, 2147
Ecl136II	GAGCTC	1 cut(s)	1430
Eco130I	CCWWGG	4 cut(s)	1221, 2182, 2246, 2694
Eco147I	AGGCCT	1 cut(s)	1483
Eco24I	GRGCYC	2 cut(s)	1432, 2246
Eco47I	GGWCC	3 cut(s)	343, 2351, 2691
Eco53kI	GAGCTC	1 cut(s)	1430
Eco57I	CTGAAG	9 cut(s)	456, 918, 933, 1352, 1623, 1746, 2171, 2457, 2498
Eco88I	CYCGRG	1 cut(s)	2856
EcoICRI	GAGCTC	1 cut(s)	1430
EcoNI	CCTNNNNNAGG	3 cut(s)	548, 2169, 2686
EcoO109I	RGGNCCY	3 cut(s)	2242, 2243, 2351
EcoRII	CCWGG	9 cut(s)	303, 345, 707, 1262, 1396, 1984, 2170, 2829, 2941
EcoT14I	CCWWGG	4 cut(s)	1221, 2182, 2246, 2694
EcoT38I	GRGCYC	2 cut(s)	1432, 2246
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	4 cut(s)	1221, 2182, 2246, 2694
Esp3I	CGTCTC	1 cut(s)	1136
FalI	AAGNNNNNCTT	4 cut(s)	429, 461, 542, 574
FaqI	GGGAC	2 cut(s)	1421, 2407
FauNDI	CATATG	1 cut(s)	851
FbaI	TGATCA	3 cut(s)	1032, 1362, 1837
FokI	GGATG	6 cut(s)	524, 691, 1841, 2324, 2594, 2644
FriOI	GRGCYC	2 cut(s)	1432, 2246
GlaI	GCGC	1 cut(s)	6
GsuI	CTGGAG	3 cut(s)	1359, 2288, 2553
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	5 cut(s)	44, 115, 1483, 2181, 2244
HapII	CCGG	3 cut(s)	134, 2178, 2809
HgaI	GACGC	2 cut(s)	257, 1550
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HpaII	CCGG	3 cut(s)	134, 2178, 2809
HphI	GGTGA	6 cut(s)	650, 828, 1264, 1547, 2451, 2882
Hpy166II	GTNNAC	2 cut(s)	2222, 2889
Hpy8I	GTNNAC	2 cut(s)	2222, 2889
Hpy99I	CGWCG	1 cut(s)	956
HpyAV	CCTTC	9 cut(s)	61, 271, 807, 1010, 1327, 1458, 1839, 2066, 2341
HpyCH4III	ACNGT	9 cut(s)	124, 252, 1000, 1147, 1699, 1787, 2231, 2735, 2919
HpyCH4IV	ACGT	4 cut(s)	721, 2203, 2304, 2779
HpySE526I	ACGT	4 cut(s)	721, 2203, 2304, 2779
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	3 cut(s)	1032, 1362, 1837
KspI	CCGCGG	1 cut(s)	51
Kzo9I	GATC	9 cut(s)	76, 418, 632, 1032, 1045, 1362, 1837, 2161, 2368
LguI	GCTCTTC	3 cut(s)	625, 1315, 2147
LmnI	GCTCC	6 cut(s)	23, 436, 1427, 1798, 2269, 2941
Lsp1109I	GCAGC	8 cut(s)	562, 859, 1124, 1610, 2265, 2635, 2917, 2920
MabI	ACCWGGT	1 cut(s)	345
MaeII	ACGT	4 cut(s)	721, 2203, 2304, 2779
MaeIII	GTNAC	7 cut(s)	146, 638, 961, 1099, 1619, 1687, 2023
MalI	GATC	9 cut(s)	78, 420, 634, 1034, 1047, 1364, 1839, 2163, 2370
MbiI	CCGCTC	1 cut(s)	38
MboI	GATC	9 cut(s)	76, 418, 632, 1032, 1045, 1362, 1837, 2161, 2368
MfeI	CAATTG	2 cut(s)	1390, 2841
MflI	RGATCY	2 cut(s)	632, 2161
MhlI	GDGCHC	5 cut(s)	990, 1432, 1576, 1908, 2246
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1403, 1736, 2804
MmeI	TCCRAC	2 cut(s)	2396, 2745
MroXI	GAANNNNTTC	2 cut(s)	441, 918
MseI	TTAA	9 cut(s)	359, 546, 560, 809, 864, 1884, 2034, 2211, 3023
MslI	CAYNNNNRTG	4 cut(s)	753, 1737, 1914, 2232
MspA1I	CMGCKG	4 cut(s)	50, 1115, 1601, 2930
MspI	CCGG	3 cut(s)	134, 2178, 2809
MspR9I	CCNGG	9 cut(s)	305, 347, 709, 1264, 1398, 1986, 2172, 2831, 2943
MunI	CAATTG	2 cut(s)	1390, 2841
Mva1269I	GAATGC	3 cut(s)	772, 1013, 2851
MvaI	CCWGG	9 cut(s)	305, 347, 709, 1264, 1398, 1986, 2172, 2831, 2943
MvnI	CGCG	1 cut(s)	50
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	1 cut(s)	2182
NdeI	CATATG	1 cut(s)	851
NdeII	GATC	9 cut(s)	76, 418, 632, 1032, 1045, 1362, 1837, 2161, 2368
NheI	GCTAGC	1 cut(s)	26
NlaIV	GGNNCC	9 cut(s)	6, 104, 570, 1907, 2176, 2244, 2271, 2352, 2680
NmuCI	GTSAC	1 cut(s)	638
NspI	RCATGY	2 cut(s)	1686, 2399
NspV	TTCGAA	1 cut(s)	1270
OliI	CACNNNNGTG	1 cut(s)	2232
PaeR7I	CTCGAG	1 cut(s)	2856
PceI	AGGCCT	1 cut(s)	1483
PciI	ACATGT	1 cut(s)	2395
PciSI	GCTCTTC	3 cut(s)	625, 1315, 2147
PcsI	WCGNNNNNNNCGW	1 cut(s)	2716
PctI	GAATGC	3 cut(s)	772, 1013, 2851
PdmI	GAANNNNTTC	2 cut(s)	441, 918
PfoI	TCCNGGA	3 cut(s)	303, 707, 2941
PleI	GAGTC	3 cut(s)	1403, 1736, 2803
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	3 cut(s)	1403, 1736, 2803
Ppu21I	YACGTR	1 cut(s)	722
PpuMI	RGGWCCY	1 cut(s)	2351
PscI	ACATGT	1 cut(s)	2395
PshBI	ATTAAT	1 cut(s)	2211
Psp124BI	GAGCTC	1 cut(s)	1432
Psp5II	RGGWCCY	1 cut(s)	2351
Psp6I	CCWGG	9 cut(s)	303, 345, 707, 1262, 1396, 1984, 2170, 2829, 2941
PspGI	CCWGG	9 cut(s)	303, 345, 707, 1262, 1396, 1984, 2170, 2829, 2941
PspN4I	GGNNCC	9 cut(s)	6, 104, 570, 1907, 2176, 2244, 2271, 2352, 2680
PspOMI	GGGCCC	1 cut(s)	2242
PspPI	GGNCC	5 cut(s)	343, 2242, 2243, 2351, 2691
PspPPI	RGGWCCY	1 cut(s)	2351
PstI	CTGCAG	1 cut(s)	1969
PstNI	CAGNNNCTG	1 cut(s)	998
PsuI	RGATCY	2 cut(s)	632, 2161
PvuII	CAGCTG	2 cut(s)	1115, 1601
RsaI	GTAC	5 cut(s)	171, 2169, 2381, 2888, 2910
RsaNI	GTAC	5 cut(s)	170, 2168, 2380, 2887, 2909
RseI	CAYNNNNRTG	4 cut(s)	753, 1737, 1914, 2232
SacI	GAGCTC	1 cut(s)	1432
SacII	CCGCGG	1 cut(s)	51
SapI	GCTCTTC	3 cut(s)	625, 1315, 2147
SaqAI	TTAA	9 cut(s)	359, 546, 560, 809, 864, 1884, 2034, 2211, 3023
Sau3AI	GATC	9 cut(s)	76, 418, 632, 1032, 1045, 1362, 1837, 2161, 2368
Sau96I	GGNCC	5 cut(s)	343, 2242, 2243, 2351, 2691
ScaI	AGTACT	3 cut(s)	171, 2381, 2910
SchI	GAGTC	3 cut(s)	1403, 1736, 2804
ScrFI	CCNGG	9 cut(s)	305, 347, 709, 1264, 1398, 1986, 2172, 2831, 2943
SduI	GDGCHC	5 cut(s)	990, 1432, 1576, 1908, 2246
SexAI	ACCWGGT	1 cut(s)	345
SfcI	CTRYAG	2 cut(s)	771, 1965
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	1 cut(s)	2856
Sfr303I	CCGCGG	1 cut(s)	51
SfuI	TTCGAA	1 cut(s)	1270
SgrBI	CCGCGG	1 cut(s)	51
SinI	GGWCC	3 cut(s)	343, 2351, 2691
SlaI	CTCGAG	1 cut(s)	2856
SmiMI	CAYNNNNRTG	4 cut(s)	753, 1737, 1914, 2232
SmlI	CTYRAG	1 cut(s)	2856
SmoI	CTYRAG	1 cut(s)	2856
SpeI	ACTAGT	1 cut(s)	529
SseBI	AGGCCT	1 cut(s)	1483
SsiI	CCGC	7 cut(s)	36, 45, 48, 50, 58, 2410, 2928
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	2 cut(s)	1441, 2509
SstI	GAGCTC	1 cut(s)	1432
StuI	AGGCCT	1 cut(s)	1483
StyD4I	CCNGG	9 cut(s)	303, 345, 707, 1262, 1396, 1984, 2170, 2829, 2941
StyI	CCWWGG	4 cut(s)	1221, 2182, 2246, 2694
TaaI	ACNGT	9 cut(s)	124, 252, 1000, 1147, 1699, 1787, 2231, 2735, 2919
TaiI	ACGT	4 cut(s)	724, 2206, 2307, 2782
TaqI	TCGA	9 cut(s)	390, 1270, 1499, 2710, 2730, 2798, 2817, 2835, 2857
TatI	WGTACW	4 cut(s)	169, 2379, 2886, 2908
TauI	GCSGC	5 cut(s)	38, 47, 50, 53, 60
Tru1I	TTAA	9 cut(s)	359, 546, 560, 809, 864, 1884, 2034, 2211, 3023
Tru9I	TTAA	9 cut(s)	359, 546, 560, 809, 864, 1884, 2034, 2211, 3023
TscAI	CASTG	5 cut(s)	68, 964, 1880, 2234, 2604
TseFI	GTSAC	1 cut(s)	638
TseI	GCWGC	8 cut(s)	575, 872, 1112, 1598, 2278, 2648, 2930, 2933
Tsp45I	GTSAC	1 cut(s)	638
TspGWI	ACGGA	5 cut(s)	728, 745, 844, 1870, 2409
TspRI	CASTG	5 cut(s)	68, 964, 1880, 2234, 2604
VpaK11BI	GGWCC	3 cut(s)	343, 2351, 2691
VspI	ATTAAT	1 cut(s)	2211
XagI	CCTNNNNNAGG	3 cut(s)	548, 2169, 2686
XapI	RAATTY	4 cut(s)	1213, 1923, 1990, 2769
XbaI	TCTAGA	1 cut(s)	1576
XceI	RCATGY	2 cut(s)	1686, 2399
XhoI	CTCGAG	1 cut(s)	2856
XmaJI	CCTAGG	1 cut(s)	2246
XmnI	GAANNNNTTC	2 cut(s)	441, 918
ZrmI	AGTACT	3 cut(s)	171, 2381, 2910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.