AT3G05510

phospholipid glycerol acyltransferase family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
1595196 .. 1598344
3149 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G05510.2

Sequence Viewer

Length: 1347 bp
ATGGGAATTCATTTTGTTGACAAGGCAGATCTATGGAAGAGTGCACTGTTGTTCAATCTTAAACTTCGTGATCGATTTCGAATCGCCGTCGATGATCACCGTGGTCGAGCTACGGTTTTCTCACCGGATGGTTGCTTCTCTTCCACTATCCACCGCTGGGTGACTCGATTCCGGAACTTTCGCCGGGAGTCTCTCCCTTCTCCACCGGCTTTTTATCGCAGACGAGTTTCTAAGGACTTAACGGCAGAAGAAGAGTCTGCTCTTTTCCGGATGCTACAAACTGTGGCTGTTCCCCTTATTGGAAATGCTTGTCATGTTTTCATGAATGGTTTTAACCGTGTTCAGGTATATGGTTTAGAGAAATTGCATGATGCTTTACTCAACAGACCAAAGAACAAGCCTCTTGTAACGGTGAGCAATCATGTTGCATCTGTGGATGATCCATTTGTCATTGCTTCATTACTTCCACCTAAATTTCTACTTGATGCCCGTAATTTGAGGTGGACGCTCTGTGCTACAGATAGATGCTTTAAAAACCCTGTAACTTCAGCTTTCTCTCGATCTGTCAAAGTTTTGCCAATTTCTCGTGGTGAAGGAATTTATCAGCAGGGAATGGACATTGCGATTTCGAAATTGAACAACGGAGGGTGGGTTCACATCTTTCCAGAAGGCAGTCGCTCCCGGGATGGTGGAAAGACTATGGGCTCAGCGAAGAGGGGTATCGGAAGGTTGATTTTGGACGCAGATACTCTCCCTATGGTTGTTCCTTTTGTGCATACTGGTATGCAGGATATAATGCCAGTTGGAGCTAGTGTTCCACGGATTGGCAAGACAGTGACAGTGATCATTGGAGACCCTATTCATTTTAATGACATTCTCAGCACTGAAGGAGCCCAACACGTCTCAAGGAAACACCTGTATGACGCCGTTTCGTCCAGAATTGGACAAAGACTGTACGATTTAAAAGCACAAGTTGATAGAGTATATATAGAACAACAATCTATGATGTCACACAATGCCAAAACACCCTCGGACCGTGCTGCTGAGATCTTTCATAGAGTCGATTGGGACTCATTTGGGATGGGAGCACAATTTTCAGAAGAATCATCACCCAGTAGTAAACCGATTGGCCAAAGCGATGATCGCATTGTCAGATCTCCCAAAAGGAGAGTCTCACCCGAAGGAGGGGTCAGCTTGAAGATTAAGAAGCTCATGGACTCAACCGAGATGATGGGGTTTGCGGCTAGAGGGTTACTAATGAACGAGTACAAGAGTCGGGTTGAATCTGCCAATGTTGGTAGGCCTTTAAAGGCTTGGAGAGAGTATTTTATGAACCGTGGATTATAA

Protein Analysis

448

Amino Acids

50.34

Weight (kDa)

9.95

Isoelectric Point (pI)

49.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyltransferase PF01553 23 - 168 1.2e-17 Acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1345
AccB7I CCANNNNNTGG 1 cut(s) 824
AccIII TCCGGA 2 cut(s) 171, 267
AciI CCGC 2 cut(s) 154, 1241
AclWI GGATC 1 cut(s) 434
AcoI YGGCCR 1 cut(s) 1129
AcsI RAATTY 3 cut(s) 6, 473, 597
AcuI CTGAAG 2 cut(s) 531, 906
AcyI GRCGYC 1 cut(s) 924
AfaI GTAC 2 cut(s) 956, 1268
AfiI CCNNNNNNNGG 6 cut(s) 157, 299, 343, 824, 1184, 1185
AflIII ACRYGT 1 cut(s) 898
AgsI TTSAA 4 cut(s) 55, 637, 1198, 1283
AjiI CACGTC 1 cut(s) 901
AloI GAACNNNNNNTCC 4 cut(s) 636, 668, 798, 830
AluBI AGCT 5 cut(s) 110, 551, 809, 1194, 1210
AluI AGCT 5 cut(s) 110, 551, 809, 1194, 1210
Alw21I GWGCWC 2 cut(s) 46, 1090
Alw26I GTCTC 4 cut(s) 195, 846, 907, 1177
Alw44I GTGCAC 1 cut(s) 42
AlwI GGATC 1 cut(s) 434
Ama87I CYCGRG 1 cut(s) 681
Aor13HI TCCGGA 2 cut(s) 171, 267
AoxI GGCC 2 cut(s) 1129, 1301
ApaLI GTGCAC 1 cut(s) 42
ApeKI GCWGC 1 cut(s) 1040
ApoI RAATTY 3 cut(s) 6, 473, 597
ArsI GACNNNNNNTTYG 4 cut(s) 1155, 1173, 1187, 1205
AspS9I GGNCC 1 cut(s) 1033
AsuC2I CCSGG 3 cut(s) 185, 682, 683
AsuHPI GGTGA 7 cut(s) 89, 114, 172, 424, 602, 1101, 1167
AsuII TTCGAA 2 cut(s) 79, 629
AvaI CYCGRG 1 cut(s) 681
AvaII GGWCC 1 cut(s) 1033
BaeGI GKGCMC 1 cut(s) 46
BalI TGGCCA 1 cut(s) 1131
BanII GRGCYC 2 cut(s) 707, 895
BauI CACGAG 1 cut(s) 585
Bbv12I GWGCWC 2 cut(s) 46, 1090
BbvI GCAGC 1 cut(s) 1027
BccI CCATC 4 cut(s) 122, 680, 1075, 1225
BceAI ACGGC 3 cut(s) 71, 258, 911
BclI TGATCA 2 cut(s) 94, 843
BcnI CCSGG 3 cut(s) 185, 682, 683
BcoDI GTCTC 4 cut(s) 195, 846, 907, 1177
BfaI CTAG 2 cut(s) 810, 1245
BfmI CTRYAG 1 cut(s) 516
BglII AGATCT 3 cut(s) 28, 1047, 1154
BisI GCNGC 2 cut(s) 1041, 1242
BlpI GCTNAGC 1 cut(s) 706
BlsI GCNGC 2 cut(s) 1042, 1243
Bme1390I CCNGG 3 cut(s) 185, 682, 683
Bme18I GGWCC 1 cut(s) 1033
BmeT110I CYCGRG 1 cut(s) 681
BmgBI CACGTC 1 cut(s) 901
BmgT120I GGNCC 1 cut(s) 1033
BmiI GGNNCC 1 cut(s) 892
BmrFI CCNGG 3 cut(s) 185, 682, 683
BmrI ACTGGG 1 cut(s) 1107
BmsI GCATC 5 cut(s) 261, 361, 437, 475, 515
BmuI ACTGGG 1 cut(s) 1107
Bpu1102I GCTNAGC 1 cut(s) 706
Bpu14I TTCGAA 2 cut(s) 79, 629
BpuEI CTTGAG 1 cut(s) 889
BpuMI CCSGG 3 cut(s) 185, 682, 683
Bsa29I ATCGAT 1 cut(s) 73
BsaHI GRCGYC 1 cut(s) 924
BsaI GGTCTC 1 cut(s) 846
BsaJI CCNNGG 5 cut(s) 100, 681, 818, 1029, 1336
BsaWI WCCGGW 3 cut(s) 124, 171, 267
BsaXI ACNNNNNCTCC 4 cut(s) 636, 666, 798, 828
Bsc4I CCNNNNNNNGG 6 cut(s) 157, 299, 343, 824, 1184, 1185
Bse118I RCCGGY 1 cut(s) 205
Bse1I ACTGG 3 cut(s) 784, 800, 1113
Bse3DI GCAATG 2 cut(s) 450, 618
BseAI TCCGGA 2 cut(s) 171, 267
BseCI ATCGAT 1 cut(s) 73
BseDI CCNNGG 5 cut(s) 100, 681, 818, 1029, 1336
BseGI GGATG 5 cut(s) 133, 276, 442, 691, 1086
BseLI CCNNNNNNNGG 6 cut(s) 157, 299, 343, 824, 1184, 1185
BseMI GCAATG 2 cut(s) 450, 618
BseMII CTCAG 3 cut(s) 720, 892, 1035
BseNI ACTGG 3 cut(s) 784, 800, 1113
BseSI GKGCMC 1 cut(s) 46
BseXI GCAGC 1 cut(s) 1027
BseYI CCCAGC 1 cut(s) 156
BshFI GGCC 2 cut(s) 1131, 1303
BshVI ATCGAT 1 cut(s) 73
BsiHKAI GWGCWC 2 cut(s) 46, 1090
BsiHKCI CYCGRG 1 cut(s) 681
BsiSI CCGG 6 cut(s) 125, 172, 184, 206, 268, 682
BslFI GGGAC 1 cut(s) 1082
BslI CCNNNNNNNGG 6 cut(s) 157, 299, 343, 824, 1184, 1185
BsmAI GTCTC 4 cut(s) 195, 846, 907, 1177
BsmBI CGTCTC 1 cut(s) 907
BsmFI GGGAC 1 cut(s) 1082
BsnI GGCC 2 cut(s) 1131, 1303
Bso31I GGTCTC 1 cut(s) 846
BsoBI CYCGRG 1 cut(s) 681
Bsp119I TTCGAA 2 cut(s) 79, 629
Bsp1286I GDGCHC 4 cut(s) 46, 707, 895, 1090
Bsp13I TCCGGA 2 cut(s) 171, 267
Bsp143I GATC 9 cut(s) 28, 70, 94, 439, 560, 843, 1047, 1141, 1154
Bsp1720I GCTNAGC 1 cut(s) 706
BspACI CCGC 2 cut(s) 154, 1241
BspANI GGCC 2 cut(s) 1131, 1303
BspCNI CTCAG 3 cut(s) 719, 891, 1036
BspDI ATCGAT 1 cut(s) 73
BspEI TCCGGA 2 cut(s) 171, 267
BspHI TCATGA 1 cut(s) 321
BspLI GGNNCC 1 cut(s) 892
BspPI GGATC 1 cut(s) 434
BspT104I TTCGAA 2 cut(s) 79, 629
BspTNI GGTCTC 1 cut(s) 846
BsrDI GCAATG 2 cut(s) 450, 618
BsrFI RCCGGY 1 cut(s) 205
BsrI ACTGG 3 cut(s) 784, 800, 1113
BssAI RCCGGY 1 cut(s) 205
BssECI CCNNGG 5 cut(s) 100, 681, 818, 1029, 1336
BssMI GATC 9 cut(s) 28, 70, 94, 439, 560, 843, 1047, 1141, 1154
BssNI GRCGYC 1 cut(s) 924
BssSI CACGAG 1 cut(s) 585
Bst2BI CACGAG 1 cut(s) 585
Bst6I CTCTTC 4 cut(s) 32, 145, 246, 707
BstACI GRCGYC 1 cut(s) 924
BstBI TTCGAA 2 cut(s) 79, 629
BstDEI CTNAG 4 cut(s) 231, 706, 878, 1044
BstDSI CCRYGG 3 cut(s) 100, 818, 1336
BstF5I GGATG 5 cut(s) 133, 276, 442, 691, 1086
BstKTI GATC 9 cut(s) 31, 73, 97, 442, 563, 846, 1050, 1144, 1157
BstMAI GTCTC 4 cut(s) 195, 846, 907, 1177
BstMBI GATC 9 cut(s) 28, 70, 94, 439, 560, 843, 1047, 1141, 1154
BstMWI GCNNNNNNNGC 1 cut(s) 1143
BstSCI CCNGG 3 cut(s) 183, 680, 681
BstSFI CTRYAG 1 cut(s) 516
BstSLI GKGCMC 1 cut(s) 46
BstV1I GCAGC 1 cut(s) 1027
BstX2I RGATCY 3 cut(s) 28, 1047, 1154
BstYI RGATCY 3 cut(s) 28, 1047, 1154
Bsu15I ATCGAT 1 cut(s) 73
BsuRI GGCC 2 cut(s) 1131, 1303
BsuTUI ATCGAT 1 cut(s) 73
BtgI CCRYGG 3 cut(s) 100, 818, 1336
BtgZI GCGATG 1 cut(s) 1152
BtrI CACGTC 1 cut(s) 901
BtsCI GGATG 5 cut(s) 133, 276, 442, 691, 1086
BtsIMutI CAGTG 4 cut(s) 44, 840, 846, 882
CciI TCATGA 1 cut(s) 321
Cfr10I RCCGGY 1 cut(s) 205
Cfr13I GGNCC 1 cut(s) 1033
Cfr9I CCCGGG 1 cut(s) 681
ClaI ATCGAT 1 cut(s) 73
CpoI CGGWCCG 1 cut(s) 1033
CseI GACGC 3 cut(s) 514, 749, 932
Csp6I GTAC 2 cut(s) 955, 1267
CspI CGGWCCG 1 cut(s) 1033
CviAII CATG 5 cut(s) 314, 322, 368, 422, 1213
CviQI GTAC 2 cut(s) 955, 1267
DdeI CTNAG 4 cut(s) 231, 706, 878, 1044
DpnI GATC 9 cut(s) 30, 72, 96, 441, 562, 845, 1049, 1143, 1156
DpnII GATC 9 cut(s) 28, 70, 94, 439, 560, 843, 1047, 1141, 1154
DraI TTTAAA 3 cut(s) 532, 963, 1308
EaeI YGGCCR 1 cut(s) 1129
Eam1104I CTCTTC 4 cut(s) 32, 145, 246, 707
EarI CTCTTC 4 cut(s) 32, 145, 246, 707
Eco147I AGGCCT 1 cut(s) 1303
Eco24I GRGCYC 2 cut(s) 707, 895
Eco31I GGTCTC 1 cut(s) 846
Eco47I GGWCC 1 cut(s) 1033
Eco57I CTGAAG 2 cut(s) 531, 906
Eco88I CYCGRG 1 cut(s) 681
EcoRI GAATTC 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 707, 895
Esp3I CGTCTC 1 cut(s) 907
FaeI CATG 5 cut(s) 317, 325, 371, 425, 1216
FaqI GGGAC 1 cut(s) 1082
FatI CATG 5 cut(s) 313, 321, 367, 421, 1212
FbaI TGATCA 2 cut(s) 94, 843
Fnu4HI GCNGC 2 cut(s) 1041, 1242
FokI GGATG 5 cut(s) 140, 283, 449, 698, 1093
FriOI GRGCYC 2 cut(s) 707, 895
Fsp4HI GCNGC 2 cut(s) 1041, 1242
FspBI CTAG 2 cut(s) 810, 1245
GluI GCNGC 2 cut(s) 1041, 1242
GsaI CCCAGC 1 cut(s) 160
HaeIII GGCC 2 cut(s) 1131, 1303
HapII CCGG 6 cut(s) 125, 172, 184, 206, 268, 682
HgaI GACGC 3 cut(s) 514, 749, 932
Hin1I GRCGYC 1 cut(s) 924
Hin1II CATG 5 cut(s) 317, 325, 371, 425, 1216
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HpaII CCGG 6 cut(s) 125, 172, 184, 206, 268, 682
HphI GGTGA 7 cut(s) 89, 114, 172, 424, 602, 1101, 1167
Hpy166II GTNNAC 5 cut(s) 19, 44, 504, 655, 1121
Hpy188I TCNGA 4 cut(s) 725, 1033, 1099, 1154
Hpy188III TCNNGA 7 cut(s) 68, 172, 268, 322, 558, 665, 936
Hpy8I GTNNAC 5 cut(s) 19, 44, 504, 655, 1121
Hpy99I CGWCG 1 cut(s) 92
HpyAV CCTTC 6 cut(s) 207, 587, 662, 720, 881, 1175
HpyCH4IV ACGT 1 cut(s) 900
HpyCH4V TGCA 5 cut(s) 44, 367, 428, 775, 787
HpyF10VI GCNNNNNNNGC 1 cut(s) 1143
HpyF3I CTNAG 4 cut(s) 231, 706, 878, 1044
HpySE526I ACGT 1 cut(s) 900
Hsp92I GRCGYC 1 cut(s) 924
Hsp92II CATG 5 cut(s) 317, 325, 371, 425, 1216
Kpn2I TCCGGA 2 cut(s) 171, 267
Ksp22I TGATCA 2 cut(s) 94, 843
Kzo9I GATC 9 cut(s) 28, 70, 94, 439, 560, 843, 1047, 1141, 1154
LmnI GCTCC 4 cut(s) 683, 806, 890, 1085
Lsp1109I GCAGC 1 cut(s) 1027
LweI GCATC 5 cut(s) 261, 361, 437, 475, 515
MaeI CTAG 2 cut(s) 810, 1245
MaeII ACGT 1 cut(s) 900
MaeIII GTNAC 6 cut(s) 160, 406, 541, 835, 1008, 1251
MalI GATC 9 cut(s) 30, 72, 96, 441, 562, 845, 1049, 1143, 1156
MboI GATC 9 cut(s) 28, 70, 94, 439, 560, 843, 1047, 1141, 1154
MboII GAAGA 7 cut(s) 49, 132, 260, 263, 724, 1112, 1210
MflI RGATCY 3 cut(s) 28, 1047, 1154
MhlI GDGCHC 4 cut(s) 46, 707, 895, 1090
MlsI TGGCCA 1 cut(s) 1131
MluCI AATT 9 cut(s) 6, 362, 473, 493, 579, 597, 632, 939, 1091
MluNI TGGCCA 1 cut(s) 1131
MlyI GAGTC 8 cut(s) 157, 197, 263, 1064, 1068, 1179, 1211, 1282
MmeI TCCRAC 1 cut(s) 784
MnlI CCTC 7 cut(s) 411, 492, 638, 708, 1039, 1178, 1241
Mox20I TGGCCA 1 cut(s) 1131
MroI TCCGGA 2 cut(s) 171, 267
MscI TGGCCA 1 cut(s) 1131
MseI TTAA 8 cut(s) 60, 239, 333, 531, 867, 962, 1203, 1307
MslI CAYNNNNRTG 2 cut(s) 867, 918
Msp20I TGGCCA 1 cut(s) 1131
MspA1I CMGCKG 1 cut(s) 156
MspI CCGG 6 cut(s) 125, 172, 184, 206, 268, 682
MspR9I CCNGG 3 cut(s) 185, 682, 683
MwoI GCNNNNNNNGC 1 cut(s) 1143
NciI CCSGG 3 cut(s) 185, 682, 683
NdeII GATC 9 cut(s) 28, 70, 94, 439, 560, 843, 1047, 1141, 1154
NlaIII CATG 5 cut(s) 317, 325, 371, 425, 1216
NlaIV GGNNCC 1 cut(s) 892
NmuCI GTSAC 3 cut(s) 160, 835, 1008
NspV TTCGAA 2 cut(s) 79, 629
PagI TCATGA 1 cut(s) 321
PceI AGGCCT 1 cut(s) 1303
PfeI GAWTC 4 cut(s) 81, 168, 1103, 1283
PflMI CCANNNNNTGG 1 cut(s) 824
PkrI GCNGC 2 cut(s) 1042, 1243
PleI GAGTC 8 cut(s) 157, 196, 262, 1064, 1067, 1178, 1211, 1281
PpsI GAGTC 8 cut(s) 157, 196, 262, 1064, 1067, 1178, 1211, 1281
PsiI TTATAA 1 cut(s) 1345
PspFI CCCAGC 1 cut(s) 156
PspN4I GGNNCC 1 cut(s) 892
PspPI GGNCC 1 cut(s) 1033
PsuI RGATCY 3 cut(s) 28, 1047, 1154
RsaI GTAC 2 cut(s) 956, 1268
RsaNI GTAC 2 cut(s) 955, 1267
RseI CAYNNNNRTG 2 cut(s) 867, 918
Rsr2I CGGWCCG 1 cut(s) 1033
RsrII CGGWCCG 1 cut(s) 1033
SaqAI TTAA 8 cut(s) 60, 239, 333, 531, 867, 962, 1203, 1307
SatI GCNGC 2 cut(s) 1041, 1242
Sau3AI GATC 9 cut(s) 28, 70, 94, 439, 560, 843, 1047, 1141, 1154
Sau96I GGNCC 1 cut(s) 1033
SchI GAGTC 8 cut(s) 157, 197, 263, 1064, 1068, 1179, 1211, 1282
ScrFI CCNGG 3 cut(s) 185, 682, 683
SduI GDGCHC 4 cut(s) 46, 707, 895, 1090
SfaNI GCATC 5 cut(s) 261, 361, 437, 475, 515
SfcI CTRYAG 1 cut(s) 516
SfuI TTCGAA 2 cut(s) 79, 629
SinI GGWCC 1 cut(s) 1033
SmaI CCCGGG 1 cut(s) 683
SmiMI CAYNNNNRTG 2 cut(s) 867, 918
SmlI CTYRAG 1 cut(s) 904
SmoI CTYRAG 1 cut(s) 904
Sse9I AATT 9 cut(s) 6, 362, 473, 493, 579, 597, 632, 939, 1091
SseBI AGGCCT 1 cut(s) 1303
SsiI CCGC 2 cut(s) 154, 1241
SspMI CTAG 2 cut(s) 810, 1245
StuI AGGCCT 1 cut(s) 1303
StyD4I CCNGG 3 cut(s) 183, 680, 681
TaiI ACGT 1 cut(s) 903
TaqI TCGA 8 cut(s) 73, 79, 90, 106, 166, 559, 629, 1062
TasI AATT 9 cut(s) 6, 362, 473, 493, 579, 597, 632, 939, 1091
TatI WGTACW 1 cut(s) 1266
TauI GCSGC 1 cut(s) 1244
TfiI GAWTC 4 cut(s) 81, 168, 1103, 1283
Tru1I TTAA 8 cut(s) 60, 239, 333, 531, 867, 962, 1203, 1307
Tru9I TTAA 8 cut(s) 60, 239, 333, 531, 867, 962, 1203, 1307
TscAI CASTG 4 cut(s) 51, 840, 846, 889
TseFI GTSAC 3 cut(s) 160, 835, 1008
TseI GCWGC 1 cut(s) 1040
Tsp45I GTSAC 3 cut(s) 160, 835, 1008
TspDTI ATGAA 7 cut(s) 310, 338, 447, 851, 1043, 1274, 1346
TspGWI ACGGA 2 cut(s) 657, 835
TspMI CCCGGG 1 cut(s) 681
TspRI CASTG 4 cut(s) 51, 840, 846, 889
Van91I CCANNNNNTGG 1 cut(s) 824
VneI GTGCAC 1 cut(s) 42
VpaK11BI GGWCC 1 cut(s) 1033
XapI RAATTY 3 cut(s) 6, 473, 597
XmaI CCCGGG 1 cut(s) 681
XspI CTAG 2 cut(s) 810, 1245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.