Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005072

Physical Location & Seq

Genomic Coordinates Reverse (-)

4055629 .. 4057344

Gene Structure 1716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G037700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 417 bp

ATGGTAATCAAAATCGAGGTGCTTAATTCGGAGATCCCAGCGATGACAGAGCCTGCCATTTCAAGCAATGGGCACCGATTGGTGGTGAAATCGGATCGGGTCGGAACATTGGCCTTAAGTAAAGATCCAAGAGCAGCTCTGGGTATGGATACAGCTATTTCGAAACTAAATCAAAGTGGTTGGGTGCACATCTTCCCAGAAGGTAGTTGTTCTCGAGATGGTGGCAAAACCACAGGGTCTTCCAAGAGAGGTGTTGGGAGATTGGTTGCAGCTGCATTTGGATGCAATGCTCTTTTCTTTGGAACAATATTTGATGACTGTTGCATATTCTTAGGGAGGGGGTTGGGTTTTGGGTCTGCAAGAGAGGAAGAGAGAGGAGCGATCGGGGGTGGTTGTGGTTGTGGTGATGGCGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006996 GO:0007005 GO:0007006 GO:0007007 GO:0007275 GO:0007507 GO:0008150 GO:0008152 GO:0008374 GO:0009987 GO:0016020 GO:0016043 GO:0016740 GO:0016746 GO:0016747 GO:0019637 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0032048 GO:0032501 GO:0032502 GO:0035965 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046471 GO:0046486 GO:0048513 GO:0048731 GO:0048856 GO:0061024 GO:0071704 GO:0071840 GO:0072359

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

139

Amino Acids

14.25

Weight (kDa)

6.71

Isoelectric Point (pI)

35.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005072)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05510 AT3G05510
fragaria_vesca	FvH4_6g06570
malus_domestica	MD04G1200600.v1.1 MD12G1213100.v1.1
prunus_persica	Prupe.2G037700_v2.0.a1 Prupe.6G320700_v2.0.a1 Prupe.6G320700_v2.0.a1
pyrus_communis	pycom04g17680 pycom12g19900
rosa_chinensis	RchiOBHm_Chr1g0322071 RchiOBHm_Chr1g0322081 RchiOBHm_Chr1g0322141 RchiOBHm_Chr3g0455731
rosa_laevigata	RLG00000025335
rosa_multiflora	Rmu_sc0002883.1_g000013
rosa_roxburghii	Rroxscaffold_2G00141120 Rroxscaffold_5G00351290 Rroxscaffold_6G00423510 Rroxscaffold_6G00424010
rosa_rugosa	Rorug03G0009600
rosa_samantha	Rh1AG049300 Rh1AG049900 Rh3AG069200 Rh3BG071700 Rh3CG070000 Rh3DG072400
rosa_wichuraiana	Rw1G004550 Rw3G005590 Rw3G005940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	72
AclWI	GGATC	3 cut(s)	28, 102, 119
AfiI	CCNNNNNNNGG	1 cut(s)	82
AflII	CTTAAG	1 cut(s)	115
AgsI	TTSAA	1 cut(s)	63
AluBI	AGCT	3 cut(s)	137, 155, 272
AluI	AGCT	3 cut(s)	137, 155, 272
Alw21I	GWGCWC	1 cut(s)	189
Alw44I	GTGCAC	1 cut(s)	185
AlwI	GGATC	3 cut(s)	28, 102, 119
AlwNI	CAGNNNCTG	1 cut(s)	53
Ama87I	CYCGRG	1 cut(s)	213
AoxI	GGCC	1 cut(s)	111
ApaLI	GTGCAC	1 cut(s)	185
ApeKI	GCWGC	3 cut(s)	134, 269, 272
AsuHPI	GGTGA	2 cut(s)	97, 416
AsuII	TTCGAA	1 cut(s)	161
AvaI	CYCGRG	1 cut(s)	213
BaeGI	GKGCMC	2 cut(s)	75, 189
BanI	GGYRCC	1 cut(s)	72
BbsI	GAAGAC	1 cut(s)	231
Bbv12I	GWGCWC	1 cut(s)	189
BbvI	GCAGC	3 cut(s)	146, 259, 281
BccI	CCATC	2 cut(s)	212, 401
BciVI	GTATCC	1 cut(s)	142
BfaI	CTAG	1 cut(s)	415
BfrI	CTTAAG	1 cut(s)	115
BfuI	GTATCC	1 cut(s)	142
BisI	GCNGC	3 cut(s)	135, 270, 273
BlsI	GCNGC	3 cut(s)	136, 271, 274
BmeT110I	CYCGRG	1 cut(s)	213
BmiI	GGNNCC	1 cut(s)	74
BmsI	GCATC	1 cut(s)	272
BpiI	GAAGAC	1 cut(s)	231
Bpu14I	TTCGAA	1 cut(s)	161
Bsc4I	CCNNNNNNNGG	1 cut(s)	82
Bse3DI	GCAATG	2 cut(s)	73, 292
BseGI	GGATG	1 cut(s)	287
BseLI	CCNNNNNNNGG	1 cut(s)	82
BseMI	GCAATG	2 cut(s)	73, 292
BseRI	GAGGAG	1 cut(s)	390
BseSI	GKGCMC	2 cut(s)	75, 189
BseXI	GCAGC	3 cut(s)	146, 259, 281
BseYI	CCCAGC	1 cut(s)	37
Bsh1285I	CGRYCG	1 cut(s)	384
BshFI	GGCC	1 cut(s)	113
BshNI	GGYRCC	1 cut(s)	72
BsiEI	CGRYCG	1 cut(s)	384
BsiHKAI	GWGCWC	1 cut(s)	189
BsiHKCI	CYCGRG	1 cut(s)	213
BslI	CCNNNNNNNGG	1 cut(s)	82
BsnI	GGCC	1 cut(s)	113
BsoBI	CYCGRG	1 cut(s)	213
Bsp119I	TTCGAA	1 cut(s)	161
Bsp1286I	GDGCHC	2 cut(s)	75, 189
Bsp143I	GATC	4 cut(s)	33, 94, 124, 381
BspANI	GGCC	1 cut(s)	113
BspLI	GGNNCC	1 cut(s)	74
BspPI	GGATC	3 cut(s)	28, 102, 119
BspT104I	TTCGAA	1 cut(s)	161
BspT107I	GGYRCC	1 cut(s)	72
BspTI	CTTAAG	1 cut(s)	115
BsrDI	GCAATG	2 cut(s)	73, 292
BssMI	GATC	4 cut(s)	33, 94, 124, 381
Bst4CI	ACNGT	1 cut(s)	320
Bst6I	CTCTTC	1 cut(s)	363
BstAFI	CTTAAG	1 cut(s)	115
BstBI	TTCGAA	1 cut(s)	161
BstC8I	GCNNGC	1 cut(s)	54
BstDEI	CTNAG	1 cut(s)	331
BstF5I	GGATG	1 cut(s)	287
BstKTI	GATC	4 cut(s)	36, 97, 127, 384
BstMBI	GATC	4 cut(s)	33, 94, 124, 381
BstMCI	CGRYCG	1 cut(s)	384
BstSLI	GKGCMC	2 cut(s)	75, 189
BstV1I	GCAGC	3 cut(s)	146, 259, 281
BstV2I	GAAGAC	1 cut(s)	231
BstX2I	RGATCY	2 cut(s)	33, 124
BstYI	RGATCY	2 cut(s)	33, 124
BsuI	GTATCC	1 cut(s)	142
BsuRI	GGCC	1 cut(s)	113
BtgZI	GCGATG	1 cut(s)	56
BtsCI	GGATG	1 cut(s)	287
Cac8I	GCNNGC	1 cut(s)	54
CaiI	CAGNNNCTG	1 cut(s)	53
CviJI	RGCY	5 cut(s)	52, 113, 137, 155, 272
CviKI_1	RGCY	5 cut(s)	52, 113, 137, 155, 272
DdeI	CTNAG	1 cut(s)	331
DpnI	GATC	4 cut(s)	35, 96, 126, 383
DpnII	GATC	4 cut(s)	33, 94, 124, 381
Eam1104I	CTCTTC	1 cut(s)	363
EarI	CTCTTC	1 cut(s)	363
Eco88I	CYCGRG	1 cut(s)	213
FaiI	YATR	2 cut(s)	146, 326
Fnu4HI	GCNGC	3 cut(s)	135, 270, 273
FokI	GGATG	1 cut(s)	294
Fsp4HI	GCNGC	3 cut(s)	135, 270, 273
FspBI	CTAG	1 cut(s)	415
GluI	GCNGC	3 cut(s)	135, 270, 273
GsaI	CCCAGC	1 cut(s)	41
HaeIII	GGCC	1 cut(s)	113
HphI	GGTGA	2 cut(s)	97, 416
Hpy166II	GTNNAC	1 cut(s)	187
Hpy188I	TCNGA	3 cut(s)	31, 94, 104
Hpy188III	TCNNGA	2 cut(s)	213, 215
Hpy8I	GTNNAC	1 cut(s)	187
HpyAV	CCTTC	1 cut(s)	194
HpyCH4III	ACNGT	1 cut(s)	320
HpyCH4V	TGCA	6 cut(s)	187, 269, 275, 285, 324, 359
HpyF3I	CTNAG	1 cut(s)	331
Kzo9I	GATC	4 cut(s)	33, 94, 124, 381
LmnI	GCTCC	1 cut(s)	377
LpnPI	CCDG	5 cut(s)	51, 66, 125, 210, 219
Lsp1109I	GCAGC	3 cut(s)	146, 259, 281
LweI	GCATC	1 cut(s)	272
MaeI	CTAG	1 cut(s)	415
MalI	GATC	4 cut(s)	35, 96, 126, 383
MboI	GATC	4 cut(s)	33, 94, 124, 381
MboII	GAAGA	3 cut(s)	184, 231, 380
MflI	RGATCY	2 cut(s)	33, 124
MhlI	GDGCHC	2 cut(s)	75, 189
MluCI	AATT	1 cut(s)	25
MmeI	TCCRAC	1 cut(s)	82
MnlI	CCTC	5 cut(s)	10, 242, 330, 358, 368
MseI	TTAA	2 cut(s)	24, 116
MslI	CAYNNNNRTG	1 cut(s)	280
MspA1I	CMGCKG	1 cut(s)	272
MspCI	CTTAAG	1 cut(s)	115
NdeII	GATC	4 cut(s)	33, 94, 124, 381
NlaIV	GGNNCC	1 cut(s)	74
NspV	TTCGAA	1 cut(s)	161
PaeR7I	CTCGAG	1 cut(s)	213
PkrI	GCNGC	3 cut(s)	136, 271, 274
Ple19I	CGATCG	1 cut(s)	384
PspFI	CCCAGC	1 cut(s)	37
PspN4I	GGNNCC	1 cut(s)	74
PstNI	CAGNNNCTG	1 cut(s)	53
PsuI	RGATCY	2 cut(s)	33, 124
PvuI	CGATCG	1 cut(s)	384
PvuII	CAGCTG	1 cut(s)	272
RseI	CAYNNNNRTG	1 cut(s)	280
SaqAI	TTAA	2 cut(s)	24, 116
SatI	GCNGC	3 cut(s)	135, 270, 273
Sau3AI	GATC	4 cut(s)	33, 94, 124, 381
SduI	GDGCHC	2 cut(s)	75, 189
SetI	ASST	6 cut(s)	21, 139, 157, 205, 253, 274
SfaNI	GCATC	1 cut(s)	272
Sfr274I	CTCGAG	1 cut(s)	213
SfuI	TTCGAA	1 cut(s)	161
SlaI	CTCGAG	1 cut(s)	213
SmiMI	CAYNNNNRTG	1 cut(s)	280
SmlI	CTYRAG	2 cut(s)	115, 213
SmoI	CTYRAG	2 cut(s)	115, 213
Sse9I	AATT	1 cut(s)	25
SspI	AATATT	1 cut(s)	309
SspMI	CTAG	1 cut(s)	415
TaaI	ACNGT	1 cut(s)	320
TaqI	TCGA	3 cut(s)	15, 161, 214
TasI	AATT	1 cut(s)	25
Tru1I	TTAA	2 cut(s)	24, 116
Tru9I	TTAA	2 cut(s)	24, 116
TseI	GCWGC	3 cut(s)	134, 269, 272
Vha464I	CTTAAG	1 cut(s)	115
VneI	GTGCAC	1 cut(s)	185
XhoI	CTCGAG	1 cut(s)	213
XspI	CTAG	1 cut(s)	415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.