Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0005072

Physical Location & Seq

Genomic Coordinates Forward (+)

703934 .. 705376

Gene Structure 1443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0009600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGGCAAAGGAGCTTGAACACACATCCAATGTAGGGCTTGAAGGAGCTTTGAGCAGTCCCTCTCCCTCATGGGCTGGTGGTTTTGACGATGAACTAATTGCTCATGAGATACTGTCGAGGCTTCCGGTCAAATCTTTAGTACGGTTTCGTTGTGTATGCAAGTCGTGGCTTGCTCTAACCTCTGATCCCAAATTTGCTAGGGAGCACGCCAGCAGGGCCGGCAGCAGGTTGAAGCTGCTTGAGACAGTCAATCCCACCAGATCCATAGACTTCAGAGCAATATTAGACGATGATGATCGGGTGGATTATGCTGTTCTACCAGAAGTGCCAAGTTTATGTGTCCTGGGTTCCTGCAATGGCTTGATATGCCGGGAAGAAGTCGGCTTGATTTGCCAAGAAGAAGTTGACGACGGGTTGATATTGCAACAAGACGAGGAAGAAGTGGAGAGAGAGGAAGAGAAAGAGGAAAAGGAAGACGAAGAGGAAGACGAGGAGAAAGAGGAAAAGGAAAACGAAGAAGAGGAAGACGAGGAGGAGAACGACGTTGATCGTGATCTTATCATATGGAATCCTTCTACTCAAGATACATACAAGTTACCCAAAATCAAAATAATTTGTCGCCGCGACCGCGACTTTTATGGATTTGGTTATGATTCCACCAATGAAGATTACAAGGTTATAATAGGCCTTAACAACAGTGAAAGTGGAAGTGACTGGGAAAGTGGAAGTGACTGGGAAACTGAAAGTGACTGGGAAACTGAAATTAGGGCTTCCAATCTCCCAACAGCCACACTTGCAGTCTTTACATCAAAAACAGGTTCATGGAAGATAGTTCAAAATCTCAACAACGTTGGAGAGTGCTATGGGCCGGGGCGCTTATTGAACGGAGCTCTACATTGGCTAGAGCACAGCTTTTCAAGATTCACAATCATCTCTTTTGATCTAGCCGAGGAGAAATTTCAACGTTTATTGTCACCACCCGATATTTGCACGACAGAAAGAACCATTGACGTTGGGATTGGGACGACTATTGGGAATTCACTCTTCCTATATGTTTACGATTGGGGGCGTCATGAATTGCAAACAGGTATTGCGATAACAATATGGGTGATGAAAGAATATGGGGTTAATGAATCCTGGACTAGAACTGTTCAGATTCCTTCTTTAAGTTTATCTCCGCATCTTGAGTTCCGTTACAGACCGATTTTGATTTTAGAGAATGGTAAAGTTTTGATGAAGCGGATCAGCCATAGCACCCTGACTTGGATTTTAGAGAATGGTAAAAAAGTTTCGAAGATGAGCAGCGAGAGGAGGCAGCTGGTGTTGTATGATCCTGAGGAAAACAGTCAAAAGGAATATAGACGTCTTCTTCATGACTATGACTATCGCAACTCGCCCGTATTATACCTGGAGACTTTAGTGTCACCAAATATCGGTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006996 GO:0007005 GO:0007006 GO:0007007 GO:0007275 GO:0007507 GO:0008150 GO:0008152 GO:0008374 GO:0009987 GO:0016020 GO:0016043 GO:0016740 GO:0016746 GO:0016747 GO:0019637 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0032048 GO:0032501 GO:0032502 GO:0035965 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046471 GO:0046486 GO:0048513 GO:0048731 GO:0048856 GO:0061024 GO:0071704 GO:0071840 GO:0072359

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

480

Amino Acids

55.06

Weight (kDa)

4.62

Isoelectric Point (pI)

51.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	33 - 65	2.5e-08	F-box domain
F-box-like	PF12937	33 - 65	1.5e-06	F-box-like
FBA_1	PF07734	183 - 433	2.2e-19	F-box associated beta propeller domain
FBA_3	PF08268	185 - 343	1.4e-12	F-box associated beta propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005072)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05510 AT3G05510
fragaria_vesca	FvH4_6g06570
malus_domestica	MD04G1200600.v1.1 MD12G1213100.v1.1
prunus_persica	Prupe.2G037700_v2.0.a1 Prupe.6G320700_v2.0.a1 Prupe.6G320700_v2.0.a1
pyrus_communis	pycom04g17680 pycom12g19900
rosa_chinensis	RchiOBHm_Chr1g0322071 RchiOBHm_Chr1g0322081 RchiOBHm_Chr1g0322141 RchiOBHm_Chr3g0455731
rosa_laevigata	RLG00000025335
rosa_multiflora	Rmu_sc0002883.1_g000013
rosa_roxburghii	Rroxscaffold_2G00141120 Rroxscaffold_5G00351290 Rroxscaffold_6G00423510 Rroxscaffold_6G00424010
rosa_rugosa	Rorug03G0009600
rosa_samantha	Rh1AG049300 Rh1AG049900 Rh3AG069200 Rh3BG071700 Rh3CG070000 Rh3DG072400
rosa_wichuraiana	Rw1G004550 Rw3G005590 Rw3G005940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	680
AasI	GACNNNNNNGTC	1 cut(s)	1420
AatII	GACGTC	1 cut(s)	1366
Acc36I	ACCTGC	1 cut(s)	216
AccII	CGCG	2 cut(s)	624, 630
AciI	CCGC	4 cut(s)	622, 628, 1178, 1240
AclI	AACGTT	2 cut(s)	849, 964
AclWI	GGATC	4 cut(s)	179, 255, 1250, 1325
AcsI	RAATTY	3 cut(s)	191, 956, 1036
AcuI	CTGAAG	1 cut(s)	256
AcyI	GRCGYC	2 cut(s)	1069, 1363
AfaI	GTAC	1 cut(s)	141
AfiI	CCNNNNNNNGG	4 cut(s)	33, 225, 1263, 1433
AgsI	TTSAA	7 cut(s)	17, 41, 232, 836, 883, 918, 962
AjnI	CCWGG	3 cut(s)	342, 1136, 1407
AluBI	AGCT	7 cut(s)	13, 47, 235, 890, 912, 1318, 1440
AluI	AGCT	7 cut(s)	13, 47, 235, 890, 912, 1318, 1440
Alw21I	GWGCWC	3 cut(s)	207, 892, 909
Alw26I	GTCTC	2 cut(s)	236, 1406
AlwI	GGATC	4 cut(s)	179, 255, 1250, 1325
AoxI	GGCC	3 cut(s)	216, 685, 866
ApeKI	GCWGC	4 cut(s)	222, 235, 1302, 1315
ApoI	RAATTY	3 cut(s)	191, 956, 1036
AspLEI	GCGC	1 cut(s)	876
AspS9I	GGNCC	2 cut(s)	216, 866
AsuC2I	CCSGG	2 cut(s)	371, 870
AsuHPI	GGTGA	3 cut(s)	966, 1120, 1416
AsuII	TTCGAA	1 cut(s)	1292
AxyI	CCTNAGG	1 cut(s)	1335
BanII	GRGCYC	1 cut(s)	892
BbsI	GAAGAC	4 cut(s)	480, 492, 531, 1358
Bbv12I	GWGCWC	3 cut(s)	207, 892, 909
BbvI	GCAGC	4 cut(s)	222, 234, 1314, 1327
BciT130I	CCWGG	3 cut(s)	344, 1138, 1409
BcnI	CCSGG	2 cut(s)	371, 870
BcoDI	GTCTC	2 cut(s)	236, 1406
BfaI	CTAG	5 cut(s)	198, 902, 944, 1143, 1441
BfoI	RGCGCY	1 cut(s)	877
BfuAI	ACCTGC	1 cut(s)	216
BglI	GCCNNNNNGGC	1 cut(s)	215
BisI	GCNGC	5 cut(s)	223, 236, 622, 1303, 1316
BlsI	GCNGC	5 cut(s)	224, 237, 623, 1304, 1317
Bme1390I	CCNGG	5 cut(s)	344, 371, 870, 1138, 1409
BmgT120I	GGNCC	2 cut(s)	216, 866
BmiI	GGNNCC	1 cut(s)	349
BmrFI	CCNGG	5 cut(s)	344, 371, 870, 1138, 1409
BmrI	ACTGGG	3 cut(s)	724, 742, 760
BmsI	GCATC	1 cut(s)	1189
BmuI	ACTGGG	3 cut(s)	724, 742, 760
BpiI	GAAGAC	4 cut(s)	480, 492, 531, 1358
BpmI	CTGGAG	1 cut(s)	1430
Bpu14I	TTCGAA	1 cut(s)	1292
BpuEI	CTTGAG	3 cut(s)	260, 564, 1205
BpuMI	CCSGG	2 cut(s)	371, 870
BsaBI	GATNNNNATC	2 cut(s)	294, 552
BsaHI	GRCGYC	2 cut(s)	1069, 1363
BsaJI	CCNNGG	3 cut(s)	343, 869, 948
BsaWI	WCCGGW	1 cut(s)	124
Bsc4I	CCNNNNNNNGG	4 cut(s)	33, 225, 1263, 1433
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	3 cut(s)	719, 737, 755
Bse21I	CCTNAGG	1 cut(s)	1335
Bse3DI	GCAATG	1 cut(s)	361
Bse8I	GATNNNNATC	2 cut(s)	294, 552
BseBI	CCWGG	3 cut(s)	344, 1138, 1409
BseDI	CCNNGG	3 cut(s)	343, 869, 948
BseGI	GGATG	1 cut(s)	23
BseJI	GATNNNNATC	2 cut(s)	294, 552
BseLI	CCNNNNNNNGG	4 cut(s)	33, 225, 1263, 1433
BseMI	GCAATG	1 cut(s)	361
BseMII	CTCAG	1 cut(s)	1326
BseNI	ACTGG	3 cut(s)	719, 737, 755
BseRI	GAGGAG	5 cut(s)	506, 545, 548, 965, 1324
BseXI	GCAGC	4 cut(s)	222, 234, 1314, 1327
Bsh1236I	CGCG	2 cut(s)	624, 630
Bsh1285I	CGRYCG	1 cut(s)	628
BshFI	GGCC	3 cut(s)	218, 687, 868
BsiEI	CGRYCG	1 cut(s)	628
BsiHKAI	GWGCWC	3 cut(s)	207, 892, 909
BsiSI	CCGG	4 cut(s)	125, 219, 370, 869
BslFI	GGGAC	2 cut(s)	42, 1036
BslI	CCNNNNNNNGG	4 cut(s)	33, 225, 1263, 1433
BsmAI	GTCTC	2 cut(s)	236, 1406
BsmFI	GGGAC	2 cut(s)	42, 1036
BsnI	GGCC	3 cut(s)	218, 687, 868
Bsp119I	TTCGAA	1 cut(s)	1292
Bsp1286I	GDGCHC	3 cut(s)	207, 892, 909
Bsp143I	GATC	8 cut(s)	184, 260, 295, 547, 553, 940, 1242, 1330
BspACI	CCGC	4 cut(s)	622, 628, 1178, 1240
BspANI	GGCC	3 cut(s)	218, 687, 868
BspCNI	CTCAG	1 cut(s)	1327
BspFNI	CGCG	2 cut(s)	624, 630
BspHI	TCATGA	3 cut(s)	103, 1072, 1372
BspLI	GGNNCC	1 cut(s)	349
BspMI	ACCTGC	1 cut(s)	216
BspPI	GGATC	4 cut(s)	179, 255, 1250, 1325
BspT104I	TTCGAA	1 cut(s)	1292
BsrDI	GCAATG	1 cut(s)	361
BsrFI	RCCGGY	1 cut(s)	218
BsrI	ACTGG	3 cut(s)	719, 737, 755
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	3 cut(s)	343, 869, 948
BssMI	GATC	8 cut(s)	184, 260, 295, 547, 553, 940, 1242, 1330
BssNI	GRCGYC	2 cut(s)	1069, 1363
Bst2UI	CCWGG	3 cut(s)	344, 1138, 1409
Bst4CI	ACNGT	6 cut(s)	114, 144, 247, 698, 1150, 1346
Bst6I	CTCTTC	4 cut(s)	450, 474, 513, 1049
BstACI	GRCGYC	2 cut(s)	1069, 1363
BstBI	TTCGAA	1 cut(s)	1292
BstC8I	GCNNGC	4 cut(s)	171, 207, 211, 220
BstDEI	CTNAG	1 cut(s)	1335
BstF5I	GGATG	1 cut(s)	23
BstFNI	CGCG	2 cut(s)	624, 630
BstH2I	RGCGCY	1 cut(s)	877
BstHHI	GCGC	1 cut(s)	876
BstKTI	GATC	8 cut(s)	187, 263, 298, 550, 556, 943, 1245, 1333
BstMAI	GTCTC	2 cut(s)	236, 1406
BstMBI	GATC	8 cut(s)	184, 260, 295, 547, 553, 940, 1242, 1330
BstMCI	CGRYCG	1 cut(s)	628
BstMWI	GCNNNNNNNGC	6 cut(s)	215, 219, 366, 390, 627, 794
BstNI	CCWGG	3 cut(s)	344, 1138, 1409
BstSCI	CCNGG	5 cut(s)	342, 369, 868, 1136, 1407
BstUI	CGCG	2 cut(s)	624, 630
BstV1I	GCAGC	4 cut(s)	222, 234, 1314, 1327
BstV2I	GAAGAC	4 cut(s)	480, 492, 531, 1358
BstX2I	RGATCY	1 cut(s)	260
BstYI	RGATCY	1 cut(s)	260
Bsu36I	CCTNAGG	1 cut(s)	1335
BsuRI	GGCC	3 cut(s)	218, 687, 868
BtsCI	GGATG	1 cut(s)	23
BtsIMutI	CAGTG	1 cut(s)	703
BveI	ACCTGC	1 cut(s)	216
Cac8I	GCNNGC	4 cut(s)	171, 207, 211, 220
CciI	TCATGA	3 cut(s)	103, 1072, 1372
CfoI	GCGC	1 cut(s)	876
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	2 cut(s)	216, 866
CseI	GACGC	1 cut(s)	1058
Csp6I	GTAC	1 cut(s)	140
CviAII	CATG	5 cut(s)	69, 104, 822, 1073, 1373
CviQI	GTAC	1 cut(s)	140
DdeI	CTNAG	1 cut(s)	1335
DpnI	GATC	8 cut(s)	186, 262, 297, 549, 555, 942, 1244, 1332
DpnII	GATC	8 cut(s)	184, 260, 295, 547, 553, 940, 1242, 1330
DrdI	GACNNNNNNGTC	1 cut(s)	1420
DseDI	GACNNNNNNGTC	1 cut(s)	1420
Eam1104I	CTCTTC	4 cut(s)	450, 474, 513, 1049
EarI	CTCTTC	4 cut(s)	450, 474, 513, 1049
Ecl136II	GAGCTC	1 cut(s)	890
Eco147I	AGGCCT	1 cut(s)	687
Eco24I	GRGCYC	1 cut(s)	892
Eco53kI	GAGCTC	1 cut(s)	890
Eco57I	CTGAAG	1 cut(s)	256
Eco81I	CCTNAGG	1 cut(s)	1335
EcoICRI	GAGCTC	1 cut(s)	890
EcoRI	GAATTC	1 cut(s)	1036
EcoRII	CCWGG	3 cut(s)	342, 1136, 1407
EcoT38I	GRGCYC	1 cut(s)	892
FaeI	CATG	5 cut(s)	72, 107, 825, 1076, 1376
FaqI	GGGAC	2 cut(s)	42, 1036
FatI	CATG	5 cut(s)	68, 103, 821, 1072, 1372
FauNDI	CATATG	1 cut(s)	563
Fnu4HI	GCNGC	5 cut(s)	223, 236, 622, 1303, 1316
FokI	GGATG	1 cut(s)	10
FriOI	GRGCYC	1 cut(s)	892
Fsp4HI	GCNGC	5 cut(s)	223, 236, 622, 1303, 1316
FspBI	CTAG	5 cut(s)	198, 902, 944, 1143, 1441
GlaI	GCGC	1 cut(s)	875
GluI	GCNGC	5 cut(s)	223, 236, 622, 1303, 1316
GsuI	CTGGAG	1 cut(s)	1430
HaeII	RGCGCY	1 cut(s)	877
HaeIII	GGCC	3 cut(s)	218, 687, 868
HapII	CCGG	4 cut(s)	125, 219, 370, 869
HgaI	GACGC	1 cut(s)	1058
HhaI	GCGC	1 cut(s)	876
Hin1I	GRCGYC	2 cut(s)	1069, 1363
Hin1II	CATG	5 cut(s)	72, 107, 825, 1076, 1376
Hin6I	GCGC	1 cut(s)	874
HinP1I	GCGC	1 cut(s)	874
HincII	GTYRAC	1 cut(s)	406
HindII	GTYRAC	1 cut(s)	406
HinfI	GANTC	5 cut(s)	568, 653, 921, 1133, 1156
HpaII	CCGG	4 cut(s)	125, 219, 370, 869
HphI	GGTGA	3 cut(s)	966, 1120, 1416
Hpy166II	GTNNAC	2 cut(s)	406, 1057
Hpy188I	TCNGA	3 cut(s)	184, 275, 1155
Hpy188III	TCNNGA	8 cut(s)	104, 551, 581, 918, 1073, 1184, 1334, 1373
Hpy8I	GTNNAC	2 cut(s)	406, 1057
Hpy99I	CGWCG	2 cut(s)	413, 545
HpyAV	CCTTC	3 cut(s)	35, 582, 1170
HpyCH4III	ACNGT	6 cut(s)	114, 144, 247, 698, 1150, 1346
HpyCH4IV	ACGT	5 cut(s)	543, 849, 964, 1011, 1363
HpyCH4V	TGCA	6 cut(s)	159, 354, 424, 797, 990, 1081
HpyF10VI	GCNNNNNNNGC	6 cut(s)	215, 219, 366, 390, 627, 794
HpyF3I	CTNAG	1 cut(s)	1335
HpySE526I	ACGT	5 cut(s)	543, 849, 964, 1011, 1363
Hsp92I	GRCGYC	2 cut(s)	1069, 1363
Hsp92II	CATG	5 cut(s)	72, 107, 825, 1076, 1376
HspAI	GCGC	1 cut(s)	874
KroI	GCCGGC	1 cut(s)	218
KroNI	GCCGGC	1 cut(s)	220
Kzo9I	GATC	8 cut(s)	184, 260, 295, 547, 553, 940, 1242, 1330
LmnI	GCTCC	4 cut(s)	10, 44, 202, 887
Lsp1109I	GCAGC	4 cut(s)	222, 234, 1314, 1327
LweI	GCATC	1 cut(s)	1189
MaeI	CTAG	5 cut(s)	198, 902, 944, 1143, 1441
MaeII	ACGT	5 cut(s)	543, 849, 964, 1011, 1363
MaeIII	GTNAC	7 cut(s)	594, 710, 728, 746, 972, 1193, 1422
MalI	GATC	8 cut(s)	186, 262, 297, 549, 555, 942, 1244, 1332
MboI	GATC	8 cut(s)	184, 260, 295, 547, 553, 940, 1242, 1330
MflI	RGATCY	1 cut(s)	260
MhlI	GDGCHC	3 cut(s)	207, 892, 909
MluCI	AATT	7 cut(s)	96, 191, 612, 762, 956, 1036, 1076
MmeI	TCCRAC	1 cut(s)	832
MroNI	GCCGGC	1 cut(s)	218
MseI	TTAA	3 cut(s)	690, 1128, 1166
MslI	CAYNNNNRTG	1 cut(s)	1377
MspA1I	CMGCKG	1 cut(s)	1318
MspI	CCGG	4 cut(s)	125, 219, 370, 869
MspR9I	CCNGG	5 cut(s)	344, 371, 870, 1138, 1409
MvaI	CCWGG	3 cut(s)	344, 1138, 1409
MvnI	CGCG	2 cut(s)	624, 630
MwoI	GCNNNNNNNGC	6 cut(s)	215, 219, 366, 390, 627, 794
NaeI	GCCGGC	1 cut(s)	220
NciI	CCSGG	2 cut(s)	371, 870
NdeI	CATATG	1 cut(s)	563
NdeII	GATC	8 cut(s)	184, 260, 295, 547, 553, 940, 1242, 1330
NgoMIV	GCCGGC	1 cut(s)	218
NlaIII	CATG	5 cut(s)	72, 107, 825, 1076, 1376
NlaIV	GGNNCC	1 cut(s)	349
NmeAIII	GCCGAG	1 cut(s)	973
NmuCI	GTSAC	5 cut(s)	710, 728, 746, 972, 1422
NspV	TTCGAA	1 cut(s)	1292
PagI	TCATGA	3 cut(s)	103, 1072, 1372
PceI	AGGCCT	1 cut(s)	687
PdiI	GCCGGC	1 cut(s)	220
PfeI	GAWTC	5 cut(s)	568, 653, 921, 1133, 1156
PfoI	TCCNGGA	1 cut(s)	1136
PkrI	GCNGC	5 cut(s)	224, 237, 623, 1304, 1317
PsiI	TTATAA	1 cut(s)	680
Psp124BI	GAGCTC	1 cut(s)	892
Psp1406I	AACGTT	2 cut(s)	849, 964
Psp6I	CCWGG	3 cut(s)	342, 1136, 1407
PspGI	CCWGG	3 cut(s)	342, 1136, 1407
PspN4I	GGNNCC	1 cut(s)	349
PspPI	GGNCC	2 cut(s)	216, 866
PsuI	RGATCY	1 cut(s)	260
PvuII	CAGCTG	1 cut(s)	1318
RsaI	GTAC	1 cut(s)	141
RsaNI	GTAC	1 cut(s)	140
RseI	CAYNNNNRTG	1 cut(s)	1377
SacI	GAGCTC	1 cut(s)	892
SaqAI	TTAA	3 cut(s)	690, 1128, 1166
SatI	GCNGC	5 cut(s)	223, 236, 622, 1303, 1316
Sau3AI	GATC	8 cut(s)	184, 260, 295, 547, 553, 940, 1242, 1330
Sau96I	GGNCC	2 cut(s)	216, 866
ScrFI	CCNGG	5 cut(s)	344, 371, 870, 1138, 1409
SduI	GDGCHC	3 cut(s)	207, 892, 909
SfaNI	GCATC	1 cut(s)	1189
SfuI	TTCGAA	1 cut(s)	1292
SmiMI	CAYNNNNRTG	1 cut(s)	1377
SmlI	CTYRAG	3 cut(s)	239, 579, 1184
SmoI	CTYRAG	3 cut(s)	239, 579, 1184
Sse9I	AATT	7 cut(s)	96, 191, 612, 762, 956, 1036, 1076
SseBI	AGGCCT	1 cut(s)	687
SsiI	CCGC	4 cut(s)	622, 628, 1178, 1240
SspI	AATATT	1 cut(s)	282
SspMI	CTAG	5 cut(s)	198, 902, 944, 1143, 1441
SstI	GAGCTC	1 cut(s)	892
StuI	AGGCCT	1 cut(s)	687
StyD4I	CCNGG	5 cut(s)	342, 369, 868, 1136, 1407
TaaI	ACNGT	6 cut(s)	114, 144, 247, 698, 1150, 1346
TaiI	ACGT	5 cut(s)	546, 852, 967, 1014, 1366
TaqI	TCGA	2 cut(s)	116, 1292
TaqII	GACCGA	1 cut(s)	1216
TasI	AATT	7 cut(s)	96, 191, 612, 762, 956, 1036, 1076
TauI	GCSGC	1 cut(s)	624
TfiI	GAWTC	5 cut(s)	568, 653, 921, 1133, 1156
Tru1I	TTAA	3 cut(s)	690, 1128, 1166
Tru9I	TTAA	3 cut(s)	690, 1128, 1166
TscAI	CASTG	1 cut(s)	703
TseFI	GTSAC	5 cut(s)	710, 728, 746, 972, 1422
TseI	GCWGC	4 cut(s)	222, 235, 1302, 1315
Tsp45I	GTSAC	5 cut(s)	710, 728, 746, 972, 1422
TspDTI	ATGAA	8 cut(s)	105, 678, 810, 1089, 1127, 1146, 1250, 1361
TspGWI	ACGGA	2 cut(s)	900, 1181
TspRI	CASTG	1 cut(s)	703
XapI	RAATTY	3 cut(s)	191, 956, 1036
XspI	CTAG	5 cut(s)	198, 902, 944, 1143, 1441
ZraI	GACGTC	1 cut(s)	1364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.