Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004412

Physical Location & Seq

Genomic Coordinates Forward (+)

2671052 .. 2675333

Gene Structure 4282 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G08800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGACTTCATCAATGGAGGAAGACGACTCGATTTCTCCTGAATCAATCTCTCTCGACACTCTAGCTTCTATTAGGTCACTCATTATCAACGCCGACACTTCCGACTCGGTGATTTCCTCGGTGTTCGATTTCCTTACTGGTCTTCTGAGCCGAGGGAACTCGGCGATTCTTCACCATGTCCTCAAGCTACTCTCCGACCTTGCTTTCCGGCGAAAGGAATTAGCACCACAAATCTTCGATTCAATCCTGTCCAACTTACTCCGCCTTCATAACACCGTCGCTGAGGCGAGCCACGAACGCGCCGCCGTGGAATCGCTTGCGGTGCTTGCGTCATTATCCGAACGAACCCCTAGCATCGCCGCCGCGCTTTCCAAAATCGACGACGAGGTATTTGCGTCGATTTGCCTCGGAGCACCTATATCTTCTCGGCTGTGGCTACTTAGGAACGCGGATAGGTTCAATGTTCCGTCGTCTGTACTATTCACCTTGTTTTTAGGGTTTAGTAAGGATCCGTATCCATATATCAGAAAAGTAGCTCTCGATGGACTGATTAATATATGTAACGCTGGTGACTTCAATCACACTCATGCCGTAGAAGGTTGCTATACTCGTGCTGTTGAGCTTCTAAGCGATGCTGAAGATAGCGTCAGATCTTCTGCAGTTCGTGCCGTCAGTGTGTGGGGCAAAGTGATGATAGCATCCAAGGAAGAAGAGATGAACAGAAGGGATTGTACAGATGCTGTTTTTCTCCAGCTTTGTTCTGTAGTGAGAGATATGAGTGTAGACGTGAGGGTTGAGGTCTTCAAGGCATTTGGGATAATAGGAACTGCATCAGAAAGCATTATATTGCAAACACTTTCTAAAAAAGTATTGGGAGCTGGAAAAGGGAAGAAACCGCAGAATCTTCTTTCTAATGGATCAGCTGATGTCAGTTCTGCAGCTGGAGTTTACATCCATGGTTTTGAAGATGAATTCTACGAGGTACGGGAAGCTGCGGTTGACTCCTTCCACTCCCTCTCAGTAAATTCTATCAAATTCCCAGATGAAGCTGTGTATTTATTGATGGATATGCTATACGATGATTATATGGTTGTGAGGTTGAAAGCTTTAAAGGCATTGCATCATATAGCAGACTTGGGGAACCTGAAGATACAGGAAACTTATATGCCTGCCTTTTTGGATGCTATTGTTGATACTTCTGAAAACATAAGAGTTGAGGCTAGAAACATTCTTAAATTGGCAAAGCTGCCTGATCTGAAGCTGGTCAACAAATGTATTGACGGTGTCCTGAAAAGTTTAGAGATGTATCCACAGGACGAACCTGATATCTTGTCTGCTCTGTTCCATTTCGGACAAAACCACACAAATTTCTTAGTCAGTATGGTCAAGAGATTTAGTGAAAAGTTAGGGACAGCTTCTGGAAGTAAAGCGGAATTCAATAGCCGGCAGTTATCTGCTTCTCTGACGCTGATAATCTCAGCCCCTCTCTCAAACAAACAAAGCATCACTTCGATACCACCTCTGGCATTTTCATATTCACTTGCAATGCTGGGGAAATTCTCTAGTGGACTTCATGATATGATGGACCAGGATATGCTTCTGGCTTACTTGACTCATTGCGCTATTCTTTCTTCTTCTTCTGGGACAGAATTCAACAAAGGAGATGTATTTTTTCATGCATATAGAGACAGTAATGCAGATCTTGCGGGAAACCCCGTCCTACTACCAGGTAAAGATATACCTGCTGAGAGCAAATACATGGCTTGCAAAGCAGAACTGGAAATTGGAAATCAAGCACTTAAGTTTGTTAACCATATACTGTTGAAAATAAAGGCTGCCTGGCTGTTATCACAATCAGGGTGCTCGAAAGAAGCACTCCGAGCATTGAGGGCTTGCAAACAGGAGTTAGCAACTTTGACAGCCGATTCTTCAATCTCCAAAGGTACATTGGACTTTATTTGTCAGTACGTTCACGTTATAGAACTTCTCGTTCAAGTATGGCCTCATTTTAATTACTCAAGACACATCAGCACGTGTAGTTCTGTAGAAGTGGAACTACTGATGGAAGAGGTAGAGATAAAACTCATGGAGATAAGGTGTAGATTCACAGGCCTGTCTACGGAGGAGTCATTAGTATTGGAGCTAGTAATTTTTGGTTGCTTGTTAAGGCTATATAAATTTGAGATTTGCTGCCGCCTTAGCTGCATGGAGAAGCTATCTTCAACAATATCTCAATTAGAGCTCCACCATGAACAACAATGCACCAAACCATCAGATTTTCTAACTGAAACTAAGAAGTCATTGGAAGAGTTTGGGAGCTCTGACGATATAAATAGCTGTAGACTGCTTGATCTCATCAAGATATTCAAATGCTTCTCTCCGGAACAGTTTACGTTTTCTGTTAATCTGCAGTGTGTCAGTGCAGAGGTAGAGGTTCCTGGTAATGGTCCTTACAGTCCGATTTCCTTTGTGCCTGGTCTCCCGGTGGCTATACCGTGTGAGATCACACTGCTTAATGTGCCAAGAGATACCTGTTTATGGCTGAGAATATCAAGAAACGATGAAACTTGCCAATTTGTGTACTTGGATCCAAACCTCTACAATGGAAATGGGAGAGAGAAGAGGTTCATGTTTACTGCAGTAACGTACATGACCCCAAGGGCTGTTGTGTTCACATTGCGGGTCTCAATAGGCATTGAGTGTTTGTTTGAAGACATTTGTTACAGAAAACAGCGTCATGGTCCCAAGCATCCAGTGGCCTATCTGTGTAAGGAAAGAGAAATTCACCTTTCTCTTGTTTCAAGAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009956 GO:0009987 GO:0010467 GO:0010496 GO:0012505 GO:0016070 GO:0016073 GO:0016180 GO:0022622 GO:0031123 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034470 GO:0034472 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043628 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048364 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0071704 GO:0090057 GO:0090304 GO:0097708 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

936

Amino Acids

104.02

Weight (kDa)

5.7

Isoelectric Point (pI)

43.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08800 AT3G08800 AT3G08800
fragaria_vesca	FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600
malus_domestica	MD04G1166800.v1.1
prunus_persica	Prupe.6G285000_v2.0.a1 Prupe.6G285000_v2.0.a1
pyrus_communis	pycom01g05880 pycom04g14820
rosa_chinensis	RchiOBHm_Chr3g0461591 RchiOBHm_Chr3g0461601
rosa_laevigata	RLG00000024915
rosa_multiflora	Rmu_co8098260.1_g000001 Rmu_sc0003578.1_g000001 Rmu_sc0032177.1_g000001 Rmu_sc0040016.1_g000001 Rmu_ssc0000193.1_g000007
rosa_roxburghii	Rroxscaffold_6G00418110 Rroxscaffold_6G00418480
rosa_rugosa	Rorug03G0052200 Rorug03G0052200 Rorug03G0052300 Rorug03G0052300
rosa_samantha	Rh3AG110400 Rh3BG113600 Rh3CG115500 Rh3DG115300
rosa_wichuraiana	Rw3G009340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1750
AccI	GTMKAC	3 cut(s)	783, 2117, 2341
AccII	CGCG	3 cut(s)	300, 365, 449
AccIII	TCCGGA	1 cut(s)	2380
AclWI	GGATC	5 cut(s)	503, 516, 925, 2582, 2595
AcsI	RAATTY	9 cut(s)	971, 1024, 1034, 1366, 1433, 1556, 1649, 2177, 2781
AcuI	CTGAAG	3 cut(s)	657, 1166, 1277
AcvI	CACGTG	1 cut(s)	2034
AfaI	GTAC	7 cut(s)	477, 733, 984, 1945, 1967, 2582, 2648
AfiI	CCNNNNNNNGG	4 cut(s)	214, 2119, 2444, 2538
AflII	CTTAAG	1 cut(s)	1799
AflIII	ACRYGT	1 cut(s)	2033
AjiI	CACGTC	1 cut(s)	787
AjnI	CCWGG	5 cut(s)	1587, 1726, 1838, 2437, 2473
AjuI	GAANNNNNNNTTGG	2 cut(s)	1767, 1799
Alw21I	GWGCWC	4 cut(s)	415, 1865, 2244, 2321
Alw26I	GTCTC	3 cut(s)	1680, 2483, 2689
AlwI	GGATC	5 cut(s)	503, 516, 925, 2582, 2595
AlwNI	CAGNNNCTG	2 cut(s)	740, 1418
Aor13HI	TCCGGA	1 cut(s)	2380
AoxI	GGCC	3 cut(s)	2000, 2110, 2757
ApeKI	GCWGC	6 cut(s)	938, 992, 1246, 1835, 2190, 2202
ApoI	RAATTY	9 cut(s)	971, 1024, 1034, 1366, 1433, 1556, 1649, 2177, 2781
ArsI	GACNNNNNNTTYG	2 cut(s)	374, 406
AseI	ATTAAT	1 cut(s)	552
Asp700I	GAANNNNTTC	1 cut(s)	2624
AspLEI	GCGC	3 cut(s)	302, 367, 1622
AspS9I	GGNCC	3 cut(s)	1585, 2447, 2741
AsuC2I	CCSGG	1 cut(s)	2483
AsuHPI	GGTGA	5 cut(s)	121, 164, 475, 581, 2777
AvaII	GGWCC	3 cut(s)	1585, 2447, 2741
BamHI	GGATCC	2 cut(s)	508, 2587
BanII	GRGCYC	2 cut(s)	2244, 2321
BarI	GAAGNNNNNNTAC	4 cut(s)	715, 747, 2040, 2072
BauI	CACGAG	1 cut(s)	609
BbrPI	CACGTG	1 cut(s)	2034
BbsI	GAAGAC	4 cut(s)	27, 134, 793, 2718
Bbv12I	GWGCWC	4 cut(s)	415, 1865, 2244, 2321
BbvCI	CCTCAGC	1 cut(s)	282
BbvI	GCAGC	6 cut(s)	950, 979, 1233, 1822, 2177, 2189
BccI	CCATC	5 cut(s)	536, 1057, 1576, 2056, 2278
BceAI	ACGGC	3 cut(s)	290, 575, 653
BcgI	CGANNNNNNTGC	2 cut(s)	374, 408
BciT130I	CCWGG	5 cut(s)	1589, 1728, 1840, 2439, 2475
BciVI	GTATCC	2 cut(s)	525, 1317
BcnI	CCSGG	1 cut(s)	2483
BcoDI	GTCTC	3 cut(s)	1680, 2483, 2689
BfaI	CTAG	5 cut(s)	62, 351, 1221, 1563, 2144
BfmI	CTRYAG	7 cut(s)	657, 762, 936, 2043, 2338, 2408, 2637
BfrI	CTTAAG	1 cut(s)	1799
BfuAI	ACCTGC	1 cut(s)	1750
BfuI	GTATCC	2 cut(s)	525, 1317
BglII	AGATCT	2 cut(s)	650, 1699
Bme1390I	CCNGG	6 cut(s)	1589, 1728, 1840, 2439, 2475, 2483
Bme18I	GGWCC	3 cut(s)	1585, 2447, 2741
BmgBI	CACGTC	1 cut(s)	787
BmgT120I	GGNCC	3 cut(s)	1585, 2447, 2741
BmiI	GGNNCC	5 cut(s)	510, 1142, 2436, 2589, 2743
BmrFI	CCNGG	6 cut(s)	1589, 1728, 1840, 2439, 2475, 2483
BmsI	GCATC	9 cut(s)	363, 622, 707, 727, 839, 1129, 1171, 1512, 2758
BpiI	GAAGAC	4 cut(s)	27, 134, 793, 2718
BpmI	CTGGAG	2 cut(s)	734, 963
Bpu10I	CCTNAGC	2 cut(s)	282, 2198
BpuEI	CTTGAG	2 cut(s)	167, 2002
BpuMI	CCSGG	1 cut(s)	2483
BsaAI	YACGTR	1 cut(s)	2034
BsaBI	GATNNNNATC	1 cut(s)	513
BsaI	GGTCTC	2 cut(s)	2483, 2689
BsaJI	CCNNGG	7 cut(s)	117, 151, 306, 406, 702, 955, 2657
BsaWI	WCCGGW	1 cut(s)	2380
BsaXI	ACNNNNNCTCC	2 cut(s)	2081, 2111
Bsc4I	CCNNNNNNNGG	4 cut(s)	214, 2119, 2444, 2538
Bse118I	RCCGGY	1 cut(s)	1443
Bse1I	ACTGG	3 cut(s)	142, 1782, 2753
Bse3DI	GCAATG	4 cut(s)	1115, 1551, 1615, 2675
Bse8I	GATNNNNATC	1 cut(s)	513
BseAI	TCCGGA	1 cut(s)	2380
BseBI	CCWGG	5 cut(s)	1589, 1728, 1840, 2439, 2475
BseDI	CCNNGG	7 cut(s)	117, 151, 306, 406, 702, 955, 2657
BseGI	GGATG	4 cut(s)	698, 951, 1186, 2749
BseJI	GATNNNNATC	1 cut(s)	513
BseLI	CCNNNNNNNGG	4 cut(s)	214, 2119, 2444, 2538
BseMI	GCAATG	4 cut(s)	1115, 1551, 1615, 2675
BseMII	CTCAG	6 cut(s)	137, 273, 1032, 1491, 1737, 2534
BseNI	ACTGG	3 cut(s)	142, 1782, 2753
BseRI	GAGGAG	1 cut(s)	2138
BseXI	GCAGC	6 cut(s)	950, 979, 1233, 1822, 2177, 2189
BseYI	CCCAGC	1 cut(s)	1549
BsgI	GTGCAG	1 cut(s)	2442
Bsh1236I	CGCG	3 cut(s)	300, 365, 449
BshFI	GGCC	3 cut(s)	2002, 2112, 2759
BsiHKAI	GWGCWC	4 cut(s)	415, 1865, 2244, 2321
BsiSI	CCGG	4 cut(s)	208, 1444, 2381, 2483
BslFI	GGGAC	3 cut(s)	1423, 1657, 2727
BslI	CCNNNNNNNGG	4 cut(s)	214, 2119, 2444, 2538
BsmAI	GTCTC	3 cut(s)	1680, 2483, 2689
BsmFI	GGGAC	3 cut(s)	1423, 1657, 2727
BsnI	GGCC	3 cut(s)	2002, 2112, 2759
Bso31I	GGTCTC	2 cut(s)	2483, 2689
Bsp1286I	GDGCHC	4 cut(s)	415, 1865, 2244, 2321
Bsp13I	TCCGGA	1 cut(s)	2380
Bsp1407I	TGTACA	1 cut(s)	731
Bsp143I	GATC	8 cut(s)	508, 650, 917, 1252, 1699, 2350, 2502, 2587
Bsp19I	CCATGG	1 cut(s)	955
BspANI	GGCC	3 cut(s)	2002, 2112, 2759
BspCNI	CTCAG	6 cut(s)	138, 274, 1031, 1490, 1738, 2535
BspEI	TCCGGA	1 cut(s)	2380
BspFNI	CGCG	3 cut(s)	300, 365, 449
BspHI	TCATGA	1 cut(s)	1573
BspLI	GGNNCC	5 cut(s)	510, 1142, 2436, 2589, 2743
BspMAI	CTGCAG	4 cut(s)	661, 940, 2412, 2641
BspMI	ACCTGC	1 cut(s)	1750
BspPI	GGATC	5 cut(s)	503, 516, 925, 2582, 2595
BspTI	CTTAAG	1 cut(s)	1799
BspTNI	GGTCTC	2 cut(s)	2483, 2689
BsrDI	GCAATG	4 cut(s)	1115, 1551, 1615, 2675
BsrFI	RCCGGY	1 cut(s)	1443
BsrGI	TGTACA	1 cut(s)	731
BsrI	ACTGG	3 cut(s)	142, 1782, 2753
BssAI	RCCGGY	1 cut(s)	1443
BssECI	CCNNGG	7 cut(s)	117, 151, 306, 406, 702, 955, 2657
BssMI	GATC	8 cut(s)	508, 650, 917, 1252, 1699, 2350, 2502, 2587
BssSI	CACGAG	1 cut(s)	609
BssT1I	CCWWGG	3 cut(s)	702, 955, 2657
Bst2BI	CACGAG	1 cut(s)	609
Bst2UI	CCWGG	5 cut(s)	1589, 1728, 1840, 2439, 2475
Bst4CI	ACNGT	7 cut(s)	277, 1283, 1691, 1821, 2388, 2456, 2496
Bst6I	CTCTTC	4 cut(s)	705, 2061, 2301, 2615
BstAFI	CTTAAG	1 cut(s)	1799
BstAPI	GCANNNNNTGC	2 cut(s)	665, 1703
BstAUI	TGTACA	1 cut(s)	731
BstBAI	YACGTR	1 cut(s)	2034
BstC8I	GCNNGC	7 cut(s)	289, 318, 327, 1170, 1445, 1765, 1894
BstDSI	CCRYGG	2 cut(s)	306, 955
BstF5I	GGATG	4 cut(s)	698, 951, 1186, 2749
BstFNI	CGCG	3 cut(s)	300, 365, 449
BstHHI	GCGC	3 cut(s)	302, 367, 1622
BstKTI	GATC	8 cut(s)	511, 653, 920, 1255, 1702, 2353, 2505, 2590
BstMAI	GTCTC	3 cut(s)	1680, 2483, 2689
BstMBI	GATC	8 cut(s)	508, 650, 917, 1252, 1699, 2350, 2502, 2587
BstNI	CCWGG	5 cut(s)	1589, 1728, 1840, 2439, 2475
BstSCI	CCNGG	6 cut(s)	1587, 1726, 1838, 2437, 2473, 2481
BstSFI	CTRYAG	7 cut(s)	657, 762, 936, 2043, 2338, 2408, 2637
BstUI	CGCG	3 cut(s)	300, 365, 449
BstV1I	GCAGC	6 cut(s)	950, 979, 1233, 1822, 2177, 2189
BstV2I	GAAGAC	4 cut(s)	27, 134, 793, 2718
BstX2I	RGATCY	4 cut(s)	508, 650, 1699, 2587
BstYI	RGATCY	4 cut(s)	508, 650, 1699, 2587
BsuI	GTATCC	2 cut(s)	525, 1317
BsuRI	GGCC	3 cut(s)	2002, 2112, 2759
BtgI	CCRYGG	2 cut(s)	306, 955
BtgZI	GCGATG	2 cut(s)	340, 645
BtrI	CACGTC	1 cut(s)	787
BtsCI	GGATG	4 cut(s)	698, 951, 1186, 2749
BtsI	GCAGTG	2 cut(s)	2417, 2507
BtsIMutI	CAGTG	5 cut(s)	679, 2417, 2425, 2507, 2760
BveI	ACCTGC	1 cut(s)	1750
Cac8I	GCNNGC	7 cut(s)	289, 318, 327, 1170, 1445, 1765, 1894
CaiI	CAGNNNCTG	2 cut(s)	740, 1418
CciI	TCATGA	1 cut(s)	1573
CfoI	GCGC	3 cut(s)	302, 367, 1622
Cfr10I	RCCGGY	1 cut(s)	1443
Cfr13I	GGNCC	3 cut(s)	1585, 2447, 2741
CseI	GACGC	5 cut(s)	318, 384, 634, 1474, 2723
CsiI	ACCWGGT	1 cut(s)	1726
Csp6I	GTAC	7 cut(s)	476, 732, 983, 1944, 1966, 2581, 2647
CviQI	GTAC	7 cut(s)	476, 732, 983, 1944, 1966, 2581, 2647
DpnI	GATC	8 cut(s)	510, 652, 919, 1254, 1701, 2352, 2504, 2589
DpnII	GATC	8 cut(s)	508, 650, 917, 1252, 1699, 2350, 2502, 2587
DraI	TTTAAA	1 cut(s)	1110
Eam1104I	CTCTTC	4 cut(s)	705, 2061, 2301, 2615
EarI	CTCTTC	4 cut(s)	705, 2061, 2301, 2615
EciI	GGCGGA	1 cut(s)	251
Ecl136II	GAGCTC	2 cut(s)	2242, 2319
Eco130I	CCWWGG	3 cut(s)	702, 955, 2657
Eco147I	AGGCCT	1 cut(s)	2112
Eco24I	GRGCYC	2 cut(s)	2244, 2321
Eco31I	GGTCTC	2 cut(s)	2483, 2689
Eco32I	GATATC	1 cut(s)	1327
Eco47I	GGWCC	3 cut(s)	1585, 2447, 2741
Eco53kI	GAGCTC	2 cut(s)	2242, 2319
Eco57I	CTGAAG	3 cut(s)	657, 1166, 1277
Eco72I	CACGTG	1 cut(s)	2034
EcoICRI	GAGCTC	2 cut(s)	2242, 2319
EcoRI	GAATTC	3 cut(s)	971, 1433, 1649
EcoRII	CCWGG	5 cut(s)	1587, 1726, 1838, 2437, 2473
EcoRV	GATATC	1 cut(s)	1327
EcoT14I	CCWWGG	3 cut(s)	702, 955, 2657
EcoT22I	ATGCAT	1 cut(s)	1681
EcoT38I	GRGCYC	2 cut(s)	2244, 2321
ErhI	CCWWGG	3 cut(s)	702, 955, 2657
FalI	AAGNNNNNCTT	2 cut(s)	1492, 1524
FaqI	GGGAC	3 cut(s)	1423, 1657, 2727
FauI	CCCGC	2 cut(s)	1699, 2673
FblI	GTMKAC	3 cut(s)	783, 2117, 2341
FokI	GGATG	4 cut(s)	685, 938, 1193, 2736
FriOI	GRGCYC	2 cut(s)	2244, 2321
FspBI	CTAG	5 cut(s)	62, 351, 1221, 1563, 2144
GlaI	GCGC	3 cut(s)	301, 366, 1621
GsaI	CCCAGC	1 cut(s)	1553
GsuI	CTGGAG	2 cut(s)	734, 963
HaeIII	GGCC	3 cut(s)	2002, 2112, 2759
HapII	CCGG	4 cut(s)	208, 1444, 2381, 2483
HgaI	GACGC	5 cut(s)	318, 384, 634, 1474, 2723
HhaI	GCGC	3 cut(s)	302, 367, 1622
Hin6I	GCGC	3 cut(s)	300, 365, 1620
HinP1I	GCGC	3 cut(s)	300, 365, 1620
HincII	GTYRAC	3 cut(s)	1000, 1267, 1810
HindII	GTYRAC	3 cut(s)	1000, 1267, 1810
HindIII	AAGCTT	1 cut(s)	1104
HpaI	GTTAAC	1 cut(s)	1810
HpaII	CCGG	4 cut(s)	208, 1444, 2381, 2483
HphI	GGTGA	5 cut(s)	121, 164, 475, 581, 2777
Hpy99I	CGWCG	5 cut(s)	281, 383, 386, 400, 472
HpyAV	CCTTC	4 cut(s)	275, 590, 717, 1015
HpyCH4III	ACNGT	7 cut(s)	277, 1283, 1691, 1821, 2388, 2456, 2496
HpyCH4IV	ACGT	6 cut(s)	786, 1968, 1974, 2033, 2393, 2645
HpySE526I	ACGT	6 cut(s)	786, 1968, 1974, 2033, 2393, 2645
HspAI	GCGC	3 cut(s)	300, 365, 1620
Kpn2I	TCCGGA	1 cut(s)	2380
KroI	GCCGGC	1 cut(s)	1443
KroNI	GCCGGC	1 cut(s)	1445
KspAI	GTTAAC	1 cut(s)	1810
Kzo9I	GATC	8 cut(s)	508, 650, 917, 1252, 1699, 2350, 2502, 2587
LmnI	GCTCC	5 cut(s)	410, 875, 2140, 2247, 2316
Lsp1109I	GCAGC	6 cut(s)	950, 979, 1233, 1822, 2177, 2189
LweI	GCATC	9 cut(s)	363, 622, 707, 727, 839, 1129, 1171, 1512, 2758
MabI	ACCWGGT	1 cut(s)	1726
MaeI	CTAG	5 cut(s)	62, 351, 1221, 1563, 2144
MaeII	ACGT	6 cut(s)	786, 1968, 1974, 2033, 2393, 2645
MaeIII	GTNAC	5 cut(s)	75, 560, 569, 2641, 2720
MalI	GATC	8 cut(s)	510, 652, 919, 1254, 1701, 2352, 2504, 2589
MboI	GATC	8 cut(s)	508, 650, 917, 1252, 1699, 2350, 2502, 2587
MflI	RGATCY	4 cut(s)	508, 650, 1699, 2587
MhlI	GDGCHC	4 cut(s)	415, 1865, 2244, 2321
MlyI	GAGTC	5 cut(s)	20, 98, 995, 1606, 2135
MmeI	TCCRAC	3 cut(s)	126, 219, 276
Mph1103I	ATGCAT	1 cut(s)	1681
MroI	TCCGGA	1 cut(s)	2380
MroNI	GCCGGC	1 cut(s)	1443
MroXI	GAANNNNTTC	1 cut(s)	2624
MseI	TTAA	9 cut(s)	552, 1109, 1233, 1800, 1809, 2010, 2165, 2403, 2514
MslI	CAYNNNNRTG	1 cut(s)	585
MspA1I	CMGCKG	2 cut(s)	923, 941
MspCI	CTTAAG	1 cut(s)	1799
MspI	CCGG	4 cut(s)	208, 1444, 2381, 2483
MspR9I	CCNGG	6 cut(s)	1589, 1728, 1840, 2439, 2475, 2483
MvaI	CCWGG	5 cut(s)	1589, 1728, 1840, 2439, 2475
MvnI	CGCG	3 cut(s)	300, 365, 449
NaeI	GCCGGC	1 cut(s)	1445
NciI	CCSGG	1 cut(s)	2483
NcoI	CCATGG	1 cut(s)	955
NdeII	GATC	8 cut(s)	508, 650, 917, 1252, 1699, 2350, 2502, 2587
NgoMIV	GCCGGC	1 cut(s)	1443
NlaIV	GGNNCC	5 cut(s)	510, 1142, 2436, 2589, 2743
NmeAIII	GCCGAG	3 cut(s)	140, 176, 406
NmuCI	GTSAC	2 cut(s)	75, 569
NsiI	ATGCAT	1 cut(s)	1681
PagI	TCATGA	1 cut(s)	1573
PceI	AGGCCT	1 cut(s)	2112
PdiI	GCCGGC	1 cut(s)	1445
PdmI	GAANNNNTTC	1 cut(s)	2624
PfeI	GAWTC	7 cut(s)	41, 166, 239, 311, 901, 1925, 2103
PflFI	GACNNNGTC	1 cut(s)	1283
PleI	GAGTC	5 cut(s)	20, 98, 995, 1606, 2134
PmaCI	CACGTG	1 cut(s)	2034
PmlI	CACGTG	1 cut(s)	2034
PpsI	GAGTC	5 cut(s)	20, 98, 995, 1606, 2134
Ppu21I	YACGTR	1 cut(s)	2034
PshBI	ATTAAT	1 cut(s)	552
Psp124BI	GAGCTC	2 cut(s)	2244, 2321
Psp6I	CCWGG	5 cut(s)	1587, 1726, 1838, 2437, 2473
PspCI	CACGTG	1 cut(s)	2034
PspFI	CCCAGC	1 cut(s)	1549
PspGI	CCWGG	5 cut(s)	1587, 1726, 1838, 2437, 2473
PspN4I	GGNNCC	5 cut(s)	510, 1142, 2436, 2589, 2743
PspPI	GGNCC	3 cut(s)	1585, 2447, 2741
PstI	CTGCAG	4 cut(s)	661, 940, 2412, 2641
PstNI	CAGNNNCTG	2 cut(s)	740, 1418
PsuI	RGATCY	4 cut(s)	508, 650, 1699, 2587
PsyI	GACNNNGTC	1 cut(s)	1283
PvuII	CAGCTG	2 cut(s)	923, 941
RsaI	GTAC	7 cut(s)	477, 733, 984, 1945, 1967, 2582, 2648
RsaNI	GTAC	7 cut(s)	476, 732, 983, 1944, 1966, 2581, 2647
RseI	CAYNNNNRTG	1 cut(s)	585
SacI	GAGCTC	2 cut(s)	2244, 2321
SaqAI	TTAA	9 cut(s)	552, 1109, 1233, 1800, 1809, 2010, 2165, 2403, 2514
Sau3AI	GATC	8 cut(s)	508, 650, 917, 1252, 1699, 2350, 2502, 2587
Sau96I	GGNCC	3 cut(s)	1585, 2447, 2741
SchI	GAGTC	5 cut(s)	20, 98, 995, 1606, 2135
ScrFI	CCNGG	6 cut(s)	1589, 1728, 1840, 2439, 2475, 2483
SduI	GDGCHC	4 cut(s)	415, 1865, 2244, 2321
SexAI	ACCWGGT	1 cut(s)	1726
SfaNI	GCATC	9 cut(s)	363, 622, 707, 727, 839, 1129, 1171, 1512, 2758
SfcI	CTRYAG	7 cut(s)	657, 762, 936, 2043, 2338, 2408, 2637
SinI	GGWCC	3 cut(s)	1585, 2447, 2741
SmiMI	CAYNNNNRTG	1 cut(s)	585
SmlI	CTYRAG	3 cut(s)	182, 1799, 2017
SmoI	CTYRAG	3 cut(s)	182, 1799, 2017
SseBI	AGGCCT	1 cut(s)	2112
SspMI	CTAG	5 cut(s)	62, 351, 1221, 1563, 2144
SstI	GAGCTC	2 cut(s)	2244, 2321
StuI	AGGCCT	1 cut(s)	2112
StyD4I	CCNGG	6 cut(s)	1587, 1726, 1838, 2437, 2473, 2481
StyI	CCWWGG	3 cut(s)	702, 955, 2657
TaaI	ACNGT	7 cut(s)	277, 1283, 1691, 1821, 2388, 2456, 2496
TaiI	ACGT	6 cut(s)	789, 1971, 1977, 2036, 2396, 2648
TaqI	TCGA	9 cut(s)	29, 54, 126, 237, 378, 398, 540, 1511, 1865
TatI	WGTACW	3 cut(s)	475, 731, 2580
TauI	GCSGC	4 cut(s)	305, 362, 365, 2196
TfiI	GAWTC	7 cut(s)	41, 166, 239, 311, 901, 1925, 2103
Tru1I	TTAA	9 cut(s)	552, 1109, 1233, 1800, 1809, 2010, 2165, 2403, 2514
Tru9I	TTAA	9 cut(s)	552, 1109, 1233, 1800, 1809, 2010, 2165, 2403, 2514
TscAI	CASTG	5 cut(s)	679, 2417, 2425, 2514, 2760
TseFI	GTSAC	2 cut(s)	75, 569
TseI	GCWGC	6 cut(s)	938, 992, 1246, 1835, 2190, 2202
Tsp45I	GTSAC	2 cut(s)	75, 569
TspGWI	ACGGA	3 cut(s)	456, 501, 2135
TspRI	CASTG	5 cut(s)	679, 2417, 2425, 2514, 2760
Tth111I	GACNNNGTC	1 cut(s)	1283
Vha464I	CTTAAG	1 cut(s)	1799
VpaK11BI	GGWCC	3 cut(s)	1585, 2447, 2741
VspI	ATTAAT	1 cut(s)	552
XapI	RAATTY	9 cut(s)	971, 1024, 1034, 1366, 1433, 1556, 1649, 2177, 2781
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1945, 2752
XmiI	GTMKAC	3 cut(s)	783, 2117, 2341
XmnI	GAANNNNTTC	1 cut(s)	2624
XspI	CTAG	5 cut(s)	62, 351, 1221, 1563, 2144
Zsp2I	ATGCAT	1 cut(s)	1681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.