Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0004412

Physical Location & Seq

Genomic Coordinates Reverse (-)

9326234 .. 9331170

Gene Structure 4937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG113600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGATTTGTTCGATGGTAAGAGACATGAGCATGGAGGTCAGGATTGAAGCTTTTCATGCCCTTGGGAAGATAGGAATGGTATCTGAAGATATTCTTTTGCAAACCCTGTCAAAGAAAGTCCTGGTGGCTACTAAAGAAAAGAAATCTCTTGCTCAGTGTTCCGATGAACAACTGGAAGTATCAGGGTCTAGTGTTGCAGGAGCTTTTATGCATGGACTTGAGGATGAATTCCATGAGGTACGAAAAGCTGCATGTCATTCTTTGGGTACACTCACCATACTCTCTTCCAAGTTTGCTGGAGAAGCCTTGAACTTACTGATGGATGTACTGAATGATGACTCAATGCTTGTGCGGTTACAAGCTTTTGAAACTATGCATCAAATGGCAACTTTTGGTCATCTGAAGGTGCAAGAAAAACACATGCATATGTTTCTTGGCACTCTGGTTGACCGTAATACCCTGACAAGATCTGCTGCAAGGAAAGTACTTAAATTGGCAAAGCTGCCAGATTTGAAGTTGTTTAGATCAACTATTGATACCCTTTTAGATAACTTGGAAATGTGTCCACAGGATGAAGCAGATATATTAAATGTTTTGTTTCATATTGGACGAAATCATGGAAAGTTTGTGGTCCGCATTATTGAGGAAGTTTCTCAGCAGATGGAGCCAGTGTCTAATGGCAAGTTAGGCTTTGATAACGTGAGGGTGGGTGCCTTGCTAGTTCTGGCCATCTCAGCTCCACTTTCACAAGAACGTGATTGCAGTATCCCACCTAGTATATTTTCTTATGCAGTTACATACCTGGGAAGGATTTCTCATGCTTTGAGTGACATTATTCATCAAGAGGGCCTGTTGAATTACTTGTCTCAATGCAGTAGATCCTCTGGACCATATGATATGGAGTTTGACTTCAGCGCGAAAAGAGGTGGAACCTCTGAAATCTTGTCTCCAACAGTTAAGAAACCAAGGGAGGCTGGAAATTCGCTTGTAGAGTACAGTCTAGATGTGCAAGATGAAGTGACCAAGTCAATGAATGTTGTTCTTGAAAAGGTGAAGGATATCTGGCCATTGGTACAAGCTGGATTCATGACTGAAGGACTCAAGACTTTAAGAAGTTGCAGGGAAGAATTGGCAACATTGACGTCTGGCTCTATTGCATCTGGTGGTAGCTTTGCCTTTACGATGCAGTATATCAAGATCATGAAACTGCTTGCAAAGGCATGGGTGAACTTCGTGCCTTCAAGACACCTTCCTTCTAGCGGGATGGGAGACTTGGACTTTGTGTTGGGAAAGCTAGACGCAAGGCTTAGTGAACTGAAAAGTACGTTTATAGGATTGTCTACAGTGGAAGAGTTGCATATTTTGGAGCTGGTACTTGTGACTTGTATGCTCAAGCTTTCTAAAGTTGAAATTTGCTGCCATCTTGGTACTTTGAGAAAGCTCTCTTGTACAATGGCACATGCGGAATCTCTCCTTGAAGATGGAACTGTTGAACCATCCAGGTTTATGATTGAAGTCAGAAAATTATTATCTGAAATTGGGACATCTCTCAATGGTAGTTCCTGTAATCCAATTCTTTTTAGAAGAGTACTGGAAAGTTTCTTCCTTGAGCGGCTTGTGTTATGTGGTGGACTAAAGCACATAAAGGCAGATCTGGACATACCTGACAATGACTACGAACATCCTCTTTGCTTTGTCGCAGGGTTGCCCGTTGGTATACCATGCCACATCACTCTTCATAATGTTTCGGTTGAAAGCAGATTATGGCTCAAAATGACTGCCAATGGAATTGATGATACTCAGTTTGTCTCCTTGGATTCAAACCTCTTTGGAGGCTGCGATGATCATAGAGTAGTTGTGTTTACCGCACCATTTTACAAAACCCCGAAAGCATTTTCTTTTACAGTCAGCGTTTGCATTTGTATGGAATATTTGTCTGAGGATGAGGATGTGTCTTTTCTCAAACGTTGTGGACCTAGACATGAGCTTACATCTCTTTGCCGAGAAAAGGAAGTTTTTCTTTCTATGGTCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009956 GO:0009987 GO:0010467 GO:0010496 GO:0012505 GO:0016070 GO:0016073 GO:0016180 GO:0022622 GO:0031123 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034470 GO:0034472 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043628 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048364 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0071704 GO:0090057 GO:0090304 GO:0097708 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

678

Amino Acids

75.32

Weight (kDa)

5.96

Isoelectric Point (pI)

43.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
INTS4_C	PF25458	554 - 674	6.6e-11	Integrator subunit 4 family C-terminal Ig-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08800 AT3G08800 AT3G08800
fragaria_vesca	FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600
malus_domestica	MD04G1166800.v1.1
prunus_persica	Prupe.6G285000_v2.0.a1 Prupe.6G285000_v2.0.a1
pyrus_communis	pycom01g05880 pycom04g14820
rosa_chinensis	RchiOBHm_Chr3g0461591 RchiOBHm_Chr3g0461601
rosa_laevigata	RLG00000024915
rosa_multiflora	Rmu_co8098260.1_g000001 Rmu_sc0003578.1_g000001 Rmu_sc0032177.1_g000001 Rmu_sc0040016.1_g000001 Rmu_ssc0000193.1_g000007
rosa_roxburghii	Rroxscaffold_6G00418110 Rroxscaffold_6G00418480
rosa_rugosa	Rorug03G0052200 Rorug03G0052200 Rorug03G0052300 Rorug03G0052300
rosa_samantha	Rh3AG110400 Rh3BG113600 Rh3CG115500 Rh3DG115300
rosa_wichuraiana	Rw3G009340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1145
AccB1I	GGYRCC	1 cut(s)	710
AccBSI	CCGCTC	1 cut(s)	1612
AccI	GTMKAC	2 cut(s)	1340, 1717
AccII	CGCG	1 cut(s)	917
AciI	CCGC	6 cut(s)	352, 634, 1260, 1463, 1612, 1866
AclI	AACGTT	1 cut(s)	1966
AclWI	GGATC	1 cut(s)	873
AcoI	YGGCCR	2 cut(s)	726, 1064
AcsI	RAATTY	3 cut(s)	227, 979, 1410
AcuI	CTGAAG	4 cut(s)	105, 422, 895, 1113
AcyI	GRCGYC	1 cut(s)	1142
AfiI	CCNNNNNNNGG	2 cut(s)	1259, 2008
AjnI	CCWGG	3 cut(s)	120, 801, 1499
Alw26I	GTCTC	5 cut(s)	15, 870, 951, 1263, 1813
AlwI	GGATC	1 cut(s)	873
AoxI	GGCC	3 cut(s)	726, 847, 1064
ApeKI	GCWGC	5 cut(s)	248, 473, 502, 1416, 1836
ApoI	RAATTY	3 cut(s)	227, 979, 1410
ArsI	GACNNNNNNTTYG	2 cut(s)	1262, 1294
Asp700I	GAANNNNTTC	4 cut(s)	51, 90, 811, 2016
AspLEI	GCGC	1 cut(s)	917
AspS9I	GGNCC	4 cut(s)	631, 847, 887, 1973
AsuHPI	GGTGA	3 cut(s)	265, 1063, 1237
AvaII	GGWCC	3 cut(s)	631, 887, 1973
BalI	TGGCCA	2 cut(s)	728, 1066
BanI	GGYRCC	1 cut(s)	710
BbvI	GCAGC	5 cut(s)	235, 460, 489, 1403, 1823
BccI	CCATC	8 cut(s)	7, 313, 655, 737, 1258, 1428, 1475, 1504
BciT130I	CCWGG	3 cut(s)	122, 803, 1501
BciVI	GTATCC	1 cut(s)	776
BclI	TGATCA	1 cut(s)	1843
BcoDI	GTCTC	5 cut(s)	15, 870, 951, 1263, 1813
BfaI	CTAG	7 cut(s)	189, 719, 774, 1001, 1257, 1295, 1977
BfmI	CTRYAG	1 cut(s)	1341
BfuI	GTATCC	1 cut(s)	776
BglII	AGATCT	2 cut(s)	467, 1651
BisI	GCNGC	6 cut(s)	249, 474, 503, 1417, 1613, 1837
BlsI	GCNGC	6 cut(s)	250, 475, 504, 1418, 1614, 1838
BmcAI	AGTACT	2 cut(s)	486, 1590
Bme1390I	CCNGG	3 cut(s)	122, 803, 1501
Bme18I	GGWCC	3 cut(s)	631, 887, 1973
BmgT120I	GGNCC	4 cut(s)	631, 847, 887, 1973
BmiI	GGNNCC	3 cut(s)	666, 712, 931
BmrFI	CCNGG	3 cut(s)	122, 803, 1501
BmsI	GCATC	3 cut(s)	385, 1166, 1173
BpmI	CTGGAG	1 cut(s)	318
BpuEI	CTTGAG	4 cut(s)	239, 1085, 1376, 1628
BsaHI	GRCGYC	1 cut(s)	1142
BsaJI	CCNNGG	4 cut(s)	61, 802, 965, 1812
BsaXI	ACNNNNNCTCC	2 cut(s)	656, 686
Bsc4I	CCNNNNNNNGG	2 cut(s)	1259, 2008
Bse1I	ACTGG	3 cut(s)	177, 668, 1596
BseBI	CCWGG	3 cut(s)	122, 803, 1501
BseDI	CCNNGG	4 cut(s)	61, 802, 965, 1812
BseGI	GGATG	8 cut(s)	229, 328, 577, 1269, 1496, 1681, 1948, 1954
BseLI	CCNNNNNNNGG	2 cut(s)	1259, 2008
BseMII	CTCAG	5 cut(s)	167, 668, 747, 1814, 1929
BseNI	ACTGG	3 cut(s)	177, 668, 1596
BseXI	GCAGC	5 cut(s)	235, 460, 489, 1403, 1823
Bsh1236I	CGCG	1 cut(s)	917
BshFI	GGCC	3 cut(s)	728, 849, 1066
BshNI	GGYRCC	1 cut(s)	710
BslFI	GGGAC	1 cut(s)	1555
BslI	CCNNNNNNNGG	2 cut(s)	1259, 2008
BsmAI	GTCTC	5 cut(s)	15, 870, 951, 1263, 1813
BsmFI	GGGAC	1 cut(s)	1555
BsnI	GGCC	3 cut(s)	728, 849, 1066
Bsp1407I	TGTACA	1 cut(s)	1448
Bsp143I	GATC	6 cut(s)	467, 524, 878, 1197, 1651, 1843
BspACI	CCGC	6 cut(s)	352, 634, 1260, 1463, 1612, 1866
BspANI	GGCC	3 cut(s)	728, 849, 1066
BspCNI	CTCAG	5 cut(s)	166, 667, 746, 1813, 1930
BspFNI	CGCG	1 cut(s)	917
BspHI	TCATGA	2 cut(s)	1086, 1200
BspLI	GGNNCC	3 cut(s)	666, 712, 931
BspPI	GGATC	1 cut(s)	873
BspT107I	GGYRCC	1 cut(s)	710
BsrBI	CCGCTC	1 cut(s)	1612
BsrGI	TGTACA	1 cut(s)	1448
BsrI	ACTGG	3 cut(s)	177, 668, 1596
BssECI	CCNNGG	4 cut(s)	61, 802, 965, 1812
BssMI	GATC	6 cut(s)	467, 524, 878, 1197, 1651, 1843
BssNAI	GTATAC	1 cut(s)	1718
BssNI	GRCGYC	1 cut(s)	1142
BssT1I	CCWWGG	3 cut(s)	61, 965, 1812
Bst1107I	GTATAC	1 cut(s)	1718
Bst2UI	CCWGG	3 cut(s)	122, 803, 1501
Bst4CI	ACNGT	6 cut(s)	452, 955, 998, 1345, 1489, 1906
Bst6I	CTCTTC	4 cut(s)	289, 1344, 1579, 1740
BstACI	GRCGYC	1 cut(s)	1142
BstAUI	TGTACA	1 cut(s)	1448
BstC8I	GCNNGC	1 cut(s)	1212
BstDEI	CTNAG	6 cut(s)	153, 654, 733, 1307, 1800, 1938
BstF5I	GGATG	8 cut(s)	229, 328, 577, 1269, 1496, 1681, 1948, 1954
BstFNI	CGCG	1 cut(s)	917
BstHHI	GCGC	1 cut(s)	917
BstKTI	GATC	6 cut(s)	470, 527, 881, 1200, 1654, 1846
BstMAI	GTCTC	5 cut(s)	15, 870, 951, 1263, 1813
BstMBI	GATC	6 cut(s)	467, 524, 878, 1197, 1651, 1843
BstMWI	GCNNNNNNNGC	5 cut(s)	56, 302, 664, 687, 734
BstNI	CCWGG	3 cut(s)	122, 803, 1501
BstNSI	RCATGY	3 cut(s)	255, 424, 1463
BstSCI	CCNGG	3 cut(s)	120, 801, 1499
BstSFI	CTRYAG	1 cut(s)	1341
BstUI	CGCG	1 cut(s)	917
BstV1I	GCAGC	5 cut(s)	235, 460, 489, 1403, 1823
BstX2I	RGATCY	3 cut(s)	467, 878, 1651
BstYI	RGATCY	3 cut(s)	467, 878, 1651
BstZ17I	GTATAC	1 cut(s)	1718
BsuI	GTATCC	1 cut(s)	776
BsuRI	GGCC	3 cut(s)	728, 849, 1066
BtgZI	GCGATG	1 cut(s)	1854
BtsCI	GGATG	8 cut(s)	229, 328, 577, 1269, 1496, 1681, 1948, 1954
BtsIMutI	CAGTG	3 cut(s)	161, 675, 1350
Cac8I	GCNNGC	1 cut(s)	1212
CciI	TCATGA	2 cut(s)	1086, 1200
CfoI	GCGC	1 cut(s)	917
Cfr13I	GGNCC	4 cut(s)	631, 847, 887, 1973
CseI	GACGC	1 cut(s)	1307
CspCI	CAANNNNNGTGG	2 cut(s)	1951, 1986
DdeI	CTNAG	6 cut(s)	153, 654, 733, 1307, 1800, 1938
DpnI	GATC	6 cut(s)	469, 526, 880, 1199, 1653, 1845
DpnII	GATC	6 cut(s)	467, 524, 878, 1197, 1651, 1843
EaeI	YGGCCR	2 cut(s)	726, 1064
Eam1104I	CTCTTC	4 cut(s)	289, 1344, 1579, 1740
EarI	CTCTTC	4 cut(s)	289, 1344, 1579, 1740
Eco130I	CCWWGG	3 cut(s)	61, 965, 1812
Eco32I	GATATC	1 cut(s)	1060
Eco47I	GGWCC	3 cut(s)	631, 887, 1973
Eco57I	CTGAAG	4 cut(s)	105, 422, 895, 1113
EcoO109I	RGGNCCY	1 cut(s)	847
EcoRI	GAATTC	1 cut(s)	227
EcoRII	CCWGG	3 cut(s)	120, 801, 1499
EcoRV	GATATC	1 cut(s)	1060
EcoT14I	CCWWGG	3 cut(s)	61, 965, 1812
EcoT22I	ATGCAT	3 cut(s)	213, 378, 426
ErhI	CCWWGG	3 cut(s)	61, 965, 1812
FalI	AAGNNNNNCTT	6 cut(s)	78, 110, 674, 706, 2004, 2036
FaqI	GGGAC	1 cut(s)	1555
FauI	CCCGC	1 cut(s)	1253
FauNDI	CATATG	2 cut(s)	426, 892
FbaI	TGATCA	1 cut(s)	1843
FblI	GTMKAC	2 cut(s)	1340, 1717
Fnu4HI	GCNGC	6 cut(s)	249, 474, 503, 1417, 1613, 1837
FokI	GGATG	8 cut(s)	236, 335, 584, 1276, 1483, 1668, 1955, 1961
Fsp4HI	GCNGC	6 cut(s)	249, 474, 503, 1417, 1613, 1837
FspBI	CTAG	7 cut(s)	189, 719, 774, 1001, 1257, 1295, 1977
GlaI	GCGC	1 cut(s)	916
GluI	GCNGC	6 cut(s)	249, 474, 503, 1417, 1613, 1837
GsuI	CTGGAG	1 cut(s)	318
HaeIII	GGCC	3 cut(s)	728, 849, 1066
HgaI	GACGC	1 cut(s)	1307
HhaI	GCGC	1 cut(s)	917
Hin1I	GRCGYC	1 cut(s)	1142
Hin6I	GCGC	1 cut(s)	915
HinP1I	GCGC	1 cut(s)	915
HincII	GTYRAC	1 cut(s)	448
HindII	GTYRAC	1 cut(s)	448
HindIII	AAGCTT	3 cut(s)	48, 360, 1394
HinfI	GANTC	5 cut(s)	338, 1083, 1098, 1466, 1817
HphI	GGTGA	3 cut(s)	265, 1063, 1237
Hpy188I	TCNGA	7 cut(s)	85, 163, 402, 937, 1520, 1534, 1939
HpyAV	CCTTC	7 cut(s)	397, 801, 1048, 1088, 1248, 1259, 1263
HpyCH4III	ACNGT	6 cut(s)	452, 955, 998, 1345, 1489, 1906
HpyCH4IV	ACGT	5 cut(s)	699, 754, 1142, 1325, 1966
HpyF10VI	GCNNNNNNNGC	5 cut(s)	56, 302, 664, 687, 734
HpyF3I	CTNAG	6 cut(s)	153, 654, 733, 1307, 1800, 1938
HpySE526I	ACGT	5 cut(s)	699, 754, 1142, 1325, 1966
Hsp92I	GRCGYC	1 cut(s)	1142
HspAI	GCGC	1 cut(s)	915
Ksp22I	TGATCA	1 cut(s)	1843
Kzo9I	GATC	6 cut(s)	467, 524, 878, 1197, 1651, 1843
LmnI	GCTCC	4 cut(s)	200, 664, 742, 1366
Lsp1109I	GCAGC	5 cut(s)	235, 460, 489, 1403, 1823
LweI	GCATC	3 cut(s)	385, 1166, 1173
MaeI	CTAG	7 cut(s)	189, 719, 774, 1001, 1257, 1295, 1977
MaeII	ACGT	5 cut(s)	699, 754, 1142, 1325, 1966
MaeIII	GTNAC	5 cut(s)	354, 793, 827, 1018, 1378
MalI	GATC	6 cut(s)	469, 526, 880, 1199, 1653, 1845
MbiI	CCGCTC	1 cut(s)	1612
MboI	GATC	6 cut(s)	467, 524, 878, 1197, 1651, 1843
MboII	GAAGA	9 cut(s)	79, 98, 276, 1136, 1361, 1490, 1594, 1596, 1727
MflI	RGATCY	3 cut(s)	467, 878, 1651
MlsI	TGGCCA	2 cut(s)	728, 1066
MluNI	TGGCCA	2 cut(s)	728, 1066
MlyI	GAGTC	2 cut(s)	332, 1092
MmeI	TCCRAC	1 cut(s)	974
Mox20I	TGGCCA	2 cut(s)	728, 1066
Mph1103I	ATGCAT	3 cut(s)	213, 378, 426
MroXI	GAANNNNTTC	4 cut(s)	51, 90, 811, 2016
MscI	TGGCCA	2 cut(s)	728, 1066
MseI	TTAA	4 cut(s)	489, 587, 957, 1109
MslI	CAYNNNNRTG	3 cut(s)	29, 425, 1922
Msp20I	TGGCCA	2 cut(s)	728, 1066
MspR9I	CCNGG	3 cut(s)	122, 803, 1501
MvaI	CCWGG	3 cut(s)	122, 803, 1501
MvnI	CGCG	1 cut(s)	917
MwoI	GCNNNNNNNGC	5 cut(s)	56, 302, 664, 687, 734
NdeI	CATATG	2 cut(s)	426, 892
NdeII	GATC	6 cut(s)	467, 524, 878, 1197, 1651, 1843
NlaIV	GGNNCC	3 cut(s)	666, 712, 931
NmeAIII	GCCGAG	1 cut(s)	2027
NmuCI	GTSAC	3 cut(s)	827, 1018, 1378
NsiI	ATGCAT	3 cut(s)	213, 378, 426
NspI	RCATGY	3 cut(s)	255, 424, 1463
PagI	TCATGA	2 cut(s)	1086, 1200
PdmI	GAANNNNTTC	4 cut(s)	51, 90, 811, 2016
PfeI	GAWTC	3 cut(s)	1083, 1466, 1817
PflFI	GACNNNGTC	1 cut(s)	1024
PkrI	GCNGC	6 cut(s)	250, 475, 504, 1418, 1614, 1838
PleI	GAGTC	2 cut(s)	332, 1092
PpsI	GAGTC	2 cut(s)	332, 1092
Psp1406I	AACGTT	1 cut(s)	1966
Psp6I	CCWGG	3 cut(s)	120, 801, 1499
PspGI	CCWGG	3 cut(s)	120, 801, 1499
PspN4I	GGNNCC	3 cut(s)	666, 712, 931
PspPI	GGNCC	4 cut(s)	631, 847, 887, 1973
PsuI	RGATCY	3 cut(s)	467, 878, 1651
PsyI	GACNNNGTC	1 cut(s)	1024
RseI	CAYNNNNRTG	3 cut(s)	29, 425, 1922
SaqAI	TTAA	4 cut(s)	489, 587, 957, 1109
SatI	GCNGC	6 cut(s)	249, 474, 503, 1417, 1613, 1837
Sau3AI	GATC	6 cut(s)	467, 524, 878, 1197, 1651, 1843
Sau96I	GGNCC	4 cut(s)	631, 847, 887, 1973
ScaI	AGTACT	2 cut(s)	486, 1590
SchI	GAGTC	2 cut(s)	332, 1092
ScrFI	CCNGG	3 cut(s)	122, 803, 1501
SfaNI	GCATC	3 cut(s)	385, 1166, 1173
SfcI	CTRYAG	1 cut(s)	1341
SinI	GGWCC	3 cut(s)	631, 887, 1973
SmiMI	CAYNNNNRTG	3 cut(s)	29, 425, 1922
SmlI	CTYRAG	4 cut(s)	218, 1100, 1391, 1607
SmoI	CTYRAG	4 cut(s)	218, 1100, 1391, 1607
SsiI	CCGC	6 cut(s)	352, 634, 1260, 1463, 1612, 1866
SspI	AATATT	1 cut(s)	1931
SspMI	CTAG	7 cut(s)	189, 719, 774, 1001, 1257, 1295, 1977
StyD4I	CCNGG	3 cut(s)	120, 801, 1499
StyI	CCWWGG	3 cut(s)	61, 965, 1812
TaaI	ACNGT	6 cut(s)	452, 955, 998, 1345, 1489, 1906
TaiI	ACGT	5 cut(s)	702, 757, 1145, 1328, 1969
TaqI	TCGA	1 cut(s)	11
TatI	WGTACW	5 cut(s)	325, 484, 993, 1448, 1588
TauI	GCSGC	1 cut(s)	1615
TfiI	GAWTC	3 cut(s)	1083, 1466, 1817
Tru1I	TTAA	4 cut(s)	489, 587, 957, 1109
Tru9I	TTAA	4 cut(s)	489, 587, 957, 1109
TscAI	CASTG	3 cut(s)	161, 675, 1350
TseFI	GTSAC	3 cut(s)	827, 1018, 1378
TseI	GCWGC	5 cut(s)	248, 473, 502, 1416, 1836
Tsp45I	GTSAC	3 cut(s)	827, 1018, 1378
TspRI	CASTG	3 cut(s)	161, 675, 1350
Tth111I	GACNNNGTC	1 cut(s)	1024
VpaK11BI	GGWCC	3 cut(s)	631, 887, 1973
XapI	RAATTY	3 cut(s)	227, 979, 1410
XbaI	TCTAGA	1 cut(s)	1000
XceI	RCATGY	3 cut(s)	255, 424, 1463
XmiI	GTMKAC	2 cut(s)	1340, 1717
XmnI	GAANNNNTTC	4 cut(s)	51, 90, 811, 2016
XspI	CTAG	7 cut(s)	189, 719, 774, 1001, 1257, 1295, 1977
ZraI	GACGTC	1 cut(s)	1143
ZrmI	AGTACT	2 cut(s)	486, 1590
Zsp2I	ATGCAT	3 cut(s)	213, 378, 426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.