Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003578.1

Orthogroup ID

OG0004412

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 4090

Gene Structure 4089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003578.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2170 bp

atggaggaggaccacgcgcccggcgcgtgcaatcactctctcaacctcccatcaatttcccccaccgaacctctctccaccgaaaccctagcttccctgagatccctaatcatcaacccctcaactccctcccccgcaatttcttcaatcctcgaaaccctaactcgctctctccaactcagtcgcgacccgctccgcactctcaagctcctctccgacctggccgcccgacacccccacctctccgccctagtcttccactccgtccgctccgactcgctcctctccaccgagtcgactcgcgtcgccgccgagtcactcgatgtcttggcttcgatccaagagcggaatcgagagctagcgccggctgttgaggaaatcgacgaccggttgttcgcctcgatttgttttagtccttctccggcgatacggccgtggcttctcagaaacgccgagaggttcggtgttaagccctacttgctatcaagcctgtttctagggtttacgaaggatccgtatccgaatgtgaggaaagctgcattggatggactcgttggtttgagtaagagcggcgttattgacgacggtgatatgatcagaggctgctacttccgcgccggtgagcttctaaacgacatggaagacggcgttaggtccgctgcaattcaagcggtgtttgcttggggtctaatcctcatggtgtgcgattcggaggcgaaagcatactggtctgatgaagtatttgtcaagatttgttcgatggtaagagacatgagcatggaggtcaggattgaagcttttcatgcccttgggaagataggaatggtatctgaagatattcttttgcaaaccctgtcaaagaaagtcctggtggctactaaagaaaagaaatctcttgctcagtgttccgatgaacaactggaagtatcagggtctagtgttgcaggagcttttatgcatggacttgaggatgaattccatgaggtacgaaaagctgcatgtcattctttgggtacactcaccatactctcttccaagtttgctggagaagccttgaacttactgatggatgtactgaatgatgactcaatgcttgtgcggttacaagcttttgaaactatgcatcaaatggcaacttttggtcatctgaaggtgcaagaaaaacacatgcatatgtttcttggcactctggttgaccgtaataccctgacaagatctgctgcaaggaaagtacttaaattggcaaagctgccagatttgaagttgtttagatcaactattgatacccttttagataacttggaaatgtgcccacaggatgaagcagatatattaaatgttttgtttcatattggacgaaatcatggaaagtttgtggtccgcattattgaggaagtttctcagcagatggagccagtgtctaatggcaagttaggctttgataacgtgagggtgggtgccttgctagttctggccatctcagctccactttcacaagaacgtgattgcagtatcccacctagtatattttcttatgcagttacatacctgggaaggatttctcatgctttgagtgacattattcatcaagagggcctgttgaattacttgtctcaatgcagtagatcctctggaccatatgatatggagtttgacttcagcgcgaaaagaggtggaacctctgaaatcttgtctccaacagttaagaaaccaagggaggctggaaattcgcttgtagagtacagtctagatgtgcaagatgaagtgaccaagtcaatgaatgttgttcttgaaaaggtgaaggatatctggccattggtacaagctggattcatgactgaaggactcaagactttaagaagttgcagggaagaattggcaacattgacgtctggctctattgcatctggtggtagctttgcctttacgatgcagtatatcaagatcatgaaactgcttgcaaaggcatgggtgaacttcgtgccttcaagacaccttccttctagcgggatgggagacttggactttgtgttgggaaagctagacgcaaggcttagtgaactgaaaagtacgtttataggattgtctacagtggaagagttgcatattttggagctggtacttgtgacttgtatgctcaagctttctaaagttgaaatttgctgccatc

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009956 GO:0009987 GO:0010467 GO:0010496 GO:0012505 GO:0016070 GO:0016073 GO:0016180 GO:0022622 GO:0031123 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034470 GO:0034472 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043628 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048364 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0071704 GO:0090057 GO:0090304 GO:0097708 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

723

Amino Acids

79.66

Weight (kDa)

5.79

Isoelectric Point (pI)

45.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08800 AT3G08800 AT3G08800
fragaria_vesca	FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600
malus_domestica	MD04G1166800.v1.1
prunus_persica	Prupe.6G285000_v2.0.a1 Prupe.6G285000_v2.0.a1
pyrus_communis	pycom01g05880 pycom04g14820
rosa_chinensis	RchiOBHm_Chr3g0461591 RchiOBHm_Chr3g0461601
rosa_laevigata	RLG00000024915
rosa_multiflora	Rmu_co8098260.1_g000001 Rmu_sc0003578.1_g000001 Rmu_sc0032177.1_g000001 Rmu_sc0040016.1_g000001 Rmu_ssc0000193.1_g000007
rosa_roxburghii	Rroxscaffold_6G00418110 Rroxscaffold_6G00418480
rosa_rugosa	Rorug03G0052200 Rorug03G0052200 Rorug03G0052300 Rorug03G0052300
rosa_samantha	Rh3AG110400 Rh3BG113600 Rh3CG115500 Rh3DG115300
rosa_wichuraiana	Rw3G009340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1892
AccB1I	GGYRCC	1 cut(s)	1457
AccBSI	CCGCTC	4 cut(s)	193, 270, 346, 570
AccI	GTMKAC	2 cut(s)	296, 2087
AccII	CGCG	6 cut(s)	17, 26, 186, 303, 615, 1664
AclWI	GGATC	5 cut(s)	96, 331, 506, 519, 1620
AcoI	YGGCCR	4 cut(s)	222, 431, 1473, 1811
AcsI	RAATTY	3 cut(s)	974, 1726, 2157
AcuI	CTGAAG	4 cut(s)	852, 1169, 1642, 1860
AcyI	GRCGYC	1 cut(s)	1889
AfaI	GTAC	8 cut(s)	987, 1015, 1074, 1233, 1742, 1821, 2071, 2121
AfiI	CCNNNNNNNGG	1 cut(s)	2006
AgeI	ACCGGT	1 cut(s)	387
AjnI	CCWGG	3 cut(s)	219, 867, 1548
AjuI	GAANNNNNNNTTGG	2 cut(s)	524, 556
Alw26I	GTCTC	4 cut(s)	762, 1617, 1698, 2010
AlwI	GGATC	5 cut(s)	96, 331, 506, 519, 1620
AlwNI	CAGNNNCTG	1 cut(s)	603
AoxI	GGCC	5 cut(s)	222, 431, 1473, 1594, 1811
ApeKI	GCWGC	7 cut(s)	536, 603, 659, 995, 1220, 1249, 2163
ApoI	RAATTY	3 cut(s)	974, 1726, 2157
ArsI	GACNNNNNNTTYG	4 cut(s)	377, 409, 2009, 2041
AsiGI	ACCGGT	1 cut(s)	387
Asp700I	GAANNNNTTC	3 cut(s)	798, 837, 1558
AspLEI	GCGC	5 cut(s)	19, 26, 364, 617, 1664
AspS9I	GGNCC	5 cut(s)	10, 654, 1378, 1594, 1634
AsuC2I	CCSGG	1 cut(s)	21
AsuHPI	GGTGA	5 cut(s)	599, 632, 1012, 1810, 1984
AsuNHI	GCTAGC	1 cut(s)	358
AvaII	GGWCC	4 cut(s)	10, 654, 1378, 1634
BaeGI	GKGCMC	1 cut(s)	1313
BaeI	ACNNNNGTAYC	2 cut(s)	419, 452
BalI	TGGCCA	2 cut(s)	1475, 1813
BamHI	GGATCC	1 cut(s)	511
BanI	GGYRCC	1 cut(s)	1457
BbsI	GAAGAC	2 cut(s)	247, 648
BbvI	GCAGC	7 cut(s)	523, 590, 646, 982, 1207, 1236, 2150
BccI	CCATC	7 cut(s)	58, 539, 754, 1060, 1402, 1484, 2005
BceAI	ACGGC	3 cut(s)	418, 446, 661
BciT130I	CCWGG	3 cut(s)	221, 869, 1550
BciVI	GTATCC	2 cut(s)	528, 1523
BclI	TGATCA	1 cut(s)	594
BcnI	CCSGG	1 cut(s)	21
BcoDI	GTCTC	4 cut(s)	762, 1617, 1698, 2010
BfmI	CTRYAG	1 cut(s)	2088
BfoI	RGCGCY	1 cut(s)	365
BfuI	GTATCC	2 cut(s)	528, 1523
BglII	AGATCT	1 cut(s)	1214
BmcAI	AGTACT	1 cut(s)	1233
Bme1390I	CCNGG	4 cut(s)	21, 221, 869, 1550
Bme18I	GGWCC	4 cut(s)	10, 654, 1378, 1634
BmgT120I	GGNCC	5 cut(s)	10, 654, 1378, 1594, 1634
BmiI	GGNNCC	4 cut(s)	513, 1413, 1459, 1678
BmrFI	CCNGG	4 cut(s)	21, 221, 869, 1550
BmsI	GCATC	3 cut(s)	1132, 1913, 1920
BmtI	GCTAGC	1 cut(s)	362
BoxI	GACNNNNGTC	1 cut(s)	302
BpiI	GAAGAC	2 cut(s)	247, 648
BpmI	CTGGAG	1 cut(s)	1065
BpuEI	CTTGAG	4 cut(s)	188, 986, 1832, 2123
BpuMI	CCSGG	1 cut(s)	21
BsaBI	GATNNNNATC	1 cut(s)	516
BsaHI	GRCGYC	1 cut(s)	1889
BsaJI	CCNNGG	4 cut(s)	434, 808, 1549, 1712
BsaWI	WCCGGW	1 cut(s)	387
BsaXI	ACNNNNNCTCC	2 cut(s)	1403, 1433
Bsc4I	CCNNNNNNNGG	1 cut(s)	2006
Bse118I	RCCGGY	3 cut(s)	364, 387, 617
Bse1I	ACTGG	3 cut(s)	731, 924, 1415
Bse8I	GATNNNNATC	1 cut(s)	516
BseBI	CCWGG	3 cut(s)	221, 869, 1550
BseDI	CCNNGG	4 cut(s)	434, 808, 1549, 1712
BseGI	GGATG	5 cut(s)	550, 976, 1075, 1324, 2016
BseJI	GATNNNNATC	1 cut(s)	516
BseLI	CCNNNNNNNGG	1 cut(s)	2006
BseMII	CTCAG	6 cut(s)	89, 193, 457, 914, 1415, 1494
BseNI	ACTGG	3 cut(s)	731, 924, 1415
BseRI	GAGGAG	3 cut(s)	20, 200, 272
BseSI	GKGCMC	1 cut(s)	1313
BseX3I	CGGCCG	1 cut(s)	431
BseXI	GCAGC	7 cut(s)	523, 590, 646, 982, 1207, 1236, 2150
Bsh1236I	CGCG	6 cut(s)	17, 26, 186, 303, 615, 1664
Bsh1285I	CGRYCG	2 cut(s)	388, 434
BshFI	GGCC	5 cut(s)	224, 433, 1475, 1596, 1813
BshNI	GGYRCC	1 cut(s)	1457
BshTI	ACCGGT	1 cut(s)	387
BsiEI	CGRYCG	2 cut(s)	388, 434
BsiSI	CCGG	5 cut(s)	21, 365, 388, 422, 618
BslI	CCNNNNNNNGG	1 cut(s)	2006
BsmAI	GTCTC	4 cut(s)	762, 1617, 1698, 2010
BsnI	GGCC	5 cut(s)	224, 433, 1475, 1596, 1813
Bsp1286I	GDGCHC	1 cut(s)	1313
Bsp143I	GATC	8 cut(s)	101, 336, 511, 594, 1214, 1271, 1625, 1944
Bsp68I	TCGCGA	1 cut(s)	186
BspANI	GGCC	5 cut(s)	224, 433, 1475, 1596, 1813
BspCNI	CTCAG	6 cut(s)	90, 192, 456, 913, 1414, 1493
BspFNI	CGCG	6 cut(s)	17, 26, 186, 303, 615, 1664
BspHI	TCATGA	2 cut(s)	1833, 1947
BspLI	GGNNCC	4 cut(s)	513, 1413, 1459, 1678
BspOI	GCTAGC	1 cut(s)	362
BspPI	GGATC	5 cut(s)	96, 331, 506, 519, 1620
BspT107I	GGYRCC	1 cut(s)	1457
BsrBI	CCGCTC	4 cut(s)	193, 270, 346, 570
BsrFI	RCCGGY	3 cut(s)	364, 387, 617
BsrI	ACTGG	3 cut(s)	731, 924, 1415
BssAI	RCCGGY	3 cut(s)	364, 387, 617
BssECI	CCNNGG	4 cut(s)	434, 808, 1549, 1712
BssMI	GATC	8 cut(s)	101, 336, 511, 594, 1214, 1271, 1625, 1944
BssNI	GRCGYC	1 cut(s)	1889
BssT1I	CCWWGG	2 cut(s)	808, 1712
Bst2UI	CCWGG	3 cut(s)	221, 869, 1550
Bst4CI	ACNGT	5 cut(s)	587, 1199, 1702, 1745, 2092
Bst6I	CTCTTC	2 cut(s)	1036, 2091
BstACI	GRCGYC	1 cut(s)	1889
BstC8I	GCNNGC	4 cut(s)	28, 360, 366, 1959
BstDEI	CTNAG	7 cut(s)	98, 179, 443, 900, 1401, 1480, 2054
BstDSI	CCRYGG	1 cut(s)	434
BstF5I	GGATG	5 cut(s)	550, 976, 1075, 1324, 2016
BstFNI	CGCG	6 cut(s)	17, 26, 186, 303, 615, 1664
BstH2I	RGCGCY	1 cut(s)	365
BstHHI	GCGC	5 cut(s)	19, 26, 364, 617, 1664
BstKTI	GATC	8 cut(s)	104, 339, 514, 597, 1217, 1274, 1628, 1947
BstMAI	GTCTC	4 cut(s)	762, 1617, 1698, 2010
BstMBI	GATC	8 cut(s)	101, 336, 511, 594, 1214, 1271, 1625, 1944
BstMCI	CGRYCG	2 cut(s)	388, 434
BstNI	CCWGG	3 cut(s)	221, 869, 1550
BstNSI	RCATGY	2 cut(s)	1002, 1171
BstPAI	GACNNNNGTC	1 cut(s)	302
BstSCI	CCNGG	4 cut(s)	19, 219, 867, 1548
BstSFI	CTRYAG	1 cut(s)	2088
BstSLI	GKGCMC	1 cut(s)	1313
BstUI	CGCG	6 cut(s)	17, 26, 186, 303, 615, 1664
BstV1I	GCAGC	7 cut(s)	523, 590, 646, 982, 1207, 1236, 2150
BstV2I	GAAGAC	2 cut(s)	247, 648
BstX2I	RGATCY	4 cut(s)	101, 511, 1214, 1625
BstYI	RGATCY	4 cut(s)	101, 511, 1214, 1625
BstZI	CGGCCG	1 cut(s)	431
BsuI	GTATCC	2 cut(s)	528, 1523
BsuRI	GGCC	5 cut(s)	224, 433, 1475, 1596, 1813
BtgI	CCRYGG	1 cut(s)	434
BtsCI	GGATG	5 cut(s)	550, 976, 1075, 1324, 2016
BtsIMutI	CAGTG	3 cut(s)	908, 1422, 2097
BtuMI	TCGCGA	1 cut(s)	186
Cac8I	GCNNGC	4 cut(s)	28, 360, 366, 1959
CaiI	CAGNNNCTG	1 cut(s)	603
CciI	TCATGA	2 cut(s)	1833, 1947
CfoI	GCGC	5 cut(s)	19, 26, 364, 617, 1664
Cfr10I	RCCGGY	3 cut(s)	364, 387, 617
Cfr13I	GGNCC	5 cut(s)	10, 654, 1378, 1594, 1634
CseI	GACGC	2 cut(s)	292, 2054
Csp6I	GTAC	8 cut(s)	986, 1014, 1073, 1232, 1741, 1820, 2070, 2120
CspAI	ACCGGT	1 cut(s)	387
CviQI	GTAC	8 cut(s)	986, 1014, 1073, 1232, 1741, 1820, 2070, 2120
DdeI	CTNAG	7 cut(s)	98, 179, 443, 900, 1401, 1480, 2054
DpnI	GATC	8 cut(s)	103, 338, 513, 596, 1216, 1273, 1627, 1946
DpnII	GATC	8 cut(s)	101, 336, 511, 594, 1214, 1271, 1625, 1944
EaeI	YGGCCR	4 cut(s)	222, 431, 1473, 1811
EagI	CGGCCG	1 cut(s)	431
Eam1104I	CTCTTC	2 cut(s)	1036, 2091
EarI	CTCTTC	2 cut(s)	1036, 2091
EciI	GGCGGA	1 cut(s)	235
EclXI	CGGCCG	1 cut(s)	431
Eco130I	CCWWGG	2 cut(s)	808, 1712
Eco32I	GATATC	1 cut(s)	1807
Eco47I	GGWCC	4 cut(s)	10, 654, 1378, 1634
Eco52I	CGGCCG	1 cut(s)	431
Eco57I	CTGAAG	4 cut(s)	852, 1169, 1642, 1860
EcoO109I	RGGNCCY	1 cut(s)	1594
EcoRI	GAATTC	1 cut(s)	974
EcoRII	CCWGG	3 cut(s)	219, 867, 1548
EcoRV	GATATC	1 cut(s)	1807
EcoT14I	CCWWGG	2 cut(s)	808, 1712
EcoT22I	ATGCAT	3 cut(s)	960, 1125, 1173
ErhI	CCWWGG	2 cut(s)	808, 1712
FalI	AAGNNNNNCTT	6 cut(s)	461, 493, 825, 857, 1421, 1453
FauI	CCCGC	3 cut(s)	142, 198, 2000
FauNDI	CATATG	2 cut(s)	1173, 1639
FbaI	TGATCA	1 cut(s)	594
FblI	GTMKAC	2 cut(s)	296, 2087
FokI	GGATG	5 cut(s)	557, 983, 1082, 1331, 2023
GlaI	GCGC	5 cut(s)	18, 25, 363, 616, 1663
GsuI	CTGGAG	1 cut(s)	1065
HaeII	RGCGCY	1 cut(s)	365
HaeIII	GGCC	5 cut(s)	224, 433, 1475, 1596, 1813
HapII	CCGG	5 cut(s)	21, 365, 388, 422, 618
HgaI	GACGC	2 cut(s)	292, 2054
HhaI	GCGC	5 cut(s)	19, 26, 364, 617, 1664
Hin1I	GRCGYC	1 cut(s)	1889
Hin6I	GCGC	5 cut(s)	17, 24, 362, 615, 1662
HinP1I	GCGC	5 cut(s)	17, 24, 362, 615, 1662
HincII	GTYRAC	2 cut(s)	297, 1195
HindII	GTYRAC	2 cut(s)	297, 1195
HindIII	AAGCTT	3 cut(s)	795, 1107, 2141
HpaII	CCGG	5 cut(s)	21, 365, 388, 422, 618
HphI	GGTGA	5 cut(s)	599, 632, 1012, 1810, 1984
Hpy166II	GTNNAC	7 cut(s)	297, 504, 1016, 1195, 1975, 2060, 2088
Hpy8I	GTNNAC	7 cut(s)	297, 504, 1016, 1195, 1975, 2060, 2088
Hpy99I	CGWCG	3 cut(s)	308, 386, 587
HpyAV	CCTTC	9 cut(s)	426, 502, 1144, 1548, 1795, 1835, 1995, 2006, 2010
HpyCH4III	ACNGT	5 cut(s)	587, 1199, 1702, 1745, 2092
HpyCH4IV	ACGT	4 cut(s)	1446, 1501, 1889, 2072
HpyF3I	CTNAG	7 cut(s)	98, 179, 443, 900, 1401, 1480, 2054
HpySE526I	ACGT	4 cut(s)	1446, 1501, 1889, 2072
Hsp92I	GRCGYC	1 cut(s)	1889
HspAI	GCGC	5 cut(s)	17, 24, 362, 615, 1662
KroI	GCCGGC	1 cut(s)	364
KroNI	GCCGGC	1 cut(s)	366
Ksp22I	TGATCA	1 cut(s)	594
Kzo9I	GATC	8 cut(s)	101, 336, 511, 594, 1214, 1271, 1625, 1944
LmnI	GCTCC	8 cut(s)	198, 213, 275, 285, 947, 1411, 1489, 2113
Lsp1109I	GCAGC	7 cut(s)	523, 590, 646, 982, 1207, 1236, 2150
LweI	GCATC	3 cut(s)	1132, 1913, 1920
MaeII	ACGT	4 cut(s)	1446, 1501, 1889, 2072
MaeIII	GTNAC	6 cut(s)	315, 1101, 1540, 1574, 1765, 2125
MalI	GATC	8 cut(s)	103, 338, 513, 596, 1216, 1273, 1627, 1946
MbiI	CCGCTC	4 cut(s)	193, 270, 346, 570
MboI	GATC	8 cut(s)	101, 336, 511, 594, 1214, 1271, 1625, 1944
MboII	GAAGA	8 cut(s)	135, 247, 653, 826, 845, 1023, 1883, 2108
MflI	RGATCY	4 cut(s)	101, 511, 1214, 1625
MhlI	GDGCHC	1 cut(s)	1313
MlsI	TGGCCA	2 cut(s)	1475, 1813
MluCI	AATT	9 cut(s)	54, 138, 663, 974, 1238, 1603, 1726, 1874, 2157
MluNI	TGGCCA	2 cut(s)	1475, 1813
MlyI	GAGTC	7 cut(s)	269, 292, 302, 323, 543, 1079, 1839
MmeI	TCCRAC	4 cut(s)	199, 240, 297, 1721
Mox20I	TGGCCA	2 cut(s)	1475, 1813
Mph1103I	ATGCAT	3 cut(s)	960, 1125, 1173
MroNI	GCCGGC	1 cut(s)	364
MroXI	GAANNNNTTC	3 cut(s)	798, 837, 1558
MscI	TGGCCA	2 cut(s)	1475, 1813
MseI	TTAA	5 cut(s)	468, 1236, 1334, 1704, 1856
MslI	CAYNNNNRTG	2 cut(s)	776, 1172
Msp20I	TGGCCA	2 cut(s)	1475, 1813
MspA1I	CMGCKG	1 cut(s)	659
MspI	CCGG	5 cut(s)	21, 365, 388, 422, 618
MspR9I	CCNGG	4 cut(s)	21, 221, 869, 1550
MvaI	CCWGG	3 cut(s)	221, 869, 1550
MvnI	CGCG	6 cut(s)	17, 26, 186, 303, 615, 1664
NaeI	GCCGGC	1 cut(s)	366
NciI	CCSGG	1 cut(s)	21
NdeI	CATATG	2 cut(s)	1173, 1639
NdeII	GATC	8 cut(s)	101, 336, 511, 594, 1214, 1271, 1625, 1944
NgoMIV	GCCGGC	1 cut(s)	364
NheI	GCTAGC	1 cut(s)	358
NlaIV	GGNNCC	4 cut(s)	513, 1413, 1459, 1678
NmeAIII	GCCGAG	2 cut(s)	337, 478
NmuCI	GTSAC	4 cut(s)	315, 1574, 1765, 2125
NruI	TCGCGA	1 cut(s)	186
NsiI	ATGCAT	3 cut(s)	960, 1125, 1173
NspI	RCATGY	2 cut(s)	1002, 1171
PagI	TCATGA	2 cut(s)	1833, 1947
PcsI	WCGNNNNNNNCGW	1 cut(s)	512
PdiI	GCCGGC	1 cut(s)	366
PdmI	GAANNNNTTC	3 cut(s)	798, 837, 1558
PfeI	GAWTC	3 cut(s)	349, 707, 1830
PflFI	GACNNNGTC	1 cut(s)	1771
PinAI	ACCGGT	1 cut(s)	387
PleI	GAGTC	7 cut(s)	269, 292, 301, 322, 543, 1079, 1839
PpsI	GAGTC	7 cut(s)	269, 292, 301, 322, 543, 1079, 1839
PshAI	GACNNNNGTC	1 cut(s)	302
Psp6I	CCWGG	3 cut(s)	219, 867, 1548
PspGI	CCWGG	3 cut(s)	219, 867, 1548
PspN4I	GGNNCC	4 cut(s)	513, 1413, 1459, 1678
PspPI	GGNCC	5 cut(s)	10, 654, 1378, 1594, 1634
PstNI	CAGNNNCTG	1 cut(s)	603
PsuI	RGATCY	4 cut(s)	101, 511, 1214, 1625
PsyI	GACNNNGTC	1 cut(s)	1771
RruI	TCGCGA	1 cut(s)	186
RsaI	GTAC	8 cut(s)	987, 1015, 1074, 1233, 1742, 1821, 2071, 2121
RsaNI	GTAC	8 cut(s)	986, 1014, 1073, 1232, 1741, 1820, 2070, 2120
RseI	CAYNNNNRTG	2 cut(s)	776, 1172
SalI	GTCGAC	1 cut(s)	295
SaqAI	TTAA	5 cut(s)	468, 1236, 1334, 1704, 1856
Sau3AI	GATC	8 cut(s)	101, 336, 511, 594, 1214, 1271, 1625, 1944
Sau96I	GGNCC	5 cut(s)	10, 654, 1378, 1594, 1634
ScaI	AGTACT	1 cut(s)	1233
SchI	GAGTC	7 cut(s)	269, 292, 302, 323, 543, 1079, 1839
ScrFI	CCNGG	4 cut(s)	21, 221, 869, 1550
SduI	GDGCHC	1 cut(s)	1313
SfaNI	GCATC	3 cut(s)	1132, 1913, 1920
SfcI	CTRYAG	1 cut(s)	2088
SgrAI	CRCCGGYG	1 cut(s)	617
SinI	GGWCC	4 cut(s)	10, 654, 1378, 1634
SmiMI	CAYNNNNRTG	2 cut(s)	776, 1172
SmlI	CTYRAG	4 cut(s)	203, 965, 1847, 2138
SmoI	CTYRAG	4 cut(s)	203, 965, 1847, 2138
Sse9I	AATT	9 cut(s)	54, 138, 663, 974, 1238, 1603, 1726, 1874, 2157
StyD4I	CCNGG	4 cut(s)	19, 219, 867, 1548
StyI	CCWWGG	2 cut(s)	808, 1712
TaaI	ACNGT	5 cut(s)	587, 1199, 1702, 1745, 2092
TaiI	ACGT	4 cut(s)	1449, 1504, 1892, 2075
TaqI	TCGA	8 cut(s)	153, 296, 321, 335, 352, 381, 401, 758
TasI	AATT	9 cut(s)	54, 138, 663, 974, 1238, 1603, 1726, 1874, 2157
TatI	WGTACW	3 cut(s)	1072, 1231, 1740
TauI	GCSGC	3 cut(s)	227, 311, 573
TfiI	GAWTC	3 cut(s)	349, 707, 1830
Tru1I	TTAA	5 cut(s)	468, 1236, 1334, 1704, 1856
Tru9I	TTAA	5 cut(s)	468, 1236, 1334, 1704, 1856
TscAI	CASTG	3 cut(s)	908, 1422, 2097
TseFI	GTSAC	4 cut(s)	315, 1574, 1765, 2125
TseI	GCWGC	7 cut(s)	536, 603, 659, 995, 1220, 1249, 2163
Tsp45I	GTSAC	4 cut(s)	315, 1574, 1765, 2125
TspGWI	ACGGA	2 cut(s)	253, 504
TspRI	CASTG	3 cut(s)	908, 1422, 2097
Tth111I	GACNNNGTC	1 cut(s)	1771
VpaK11BI	GGWCC	4 cut(s)	10, 654, 1378, 1634
XapI	RAATTY	3 cut(s)	974, 1726, 2157
XbaI	TCTAGA	1 cut(s)	1747
XceI	RCATGY	2 cut(s)	1002, 1171
XmiI	GTMKAC	2 cut(s)	296, 2087
XmnI	GAANNNNTTC	3 cut(s)	798, 837, 1558
ZraI	GACGTC	1 cut(s)	1890
ZrmI	AGTACT	1 cut(s)	1233
Zsp2I	ATGCAT	3 cut(s)	960, 1125, 1173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.