snRNA processing
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08800 AT3G08800 AT3G08800 |
| fragaria_vesca | FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 |
| malus_domestica | MD04G1166800.v1.1 |
| prunus_persica | Prupe.6G285000_v2.0.a1 Prupe.6G285000_v2.0.a1 |
| pyrus_communis | pycom01g05880 pycom04g14820 |
| rosa_chinensis | RchiOBHm_Chr3g0461591 RchiOBHm_Chr3g0461601 |
| rosa_laevigata | RLG00000024915 |
| rosa_multiflora | Rmu_co8098260.1_g000001 Rmu_sc0003578.1_g000001 Rmu_sc0032177.1_g000001 Rmu_sc0040016.1_g000001 Rmu_ssc0000193.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00418110 Rroxscaffold_6G00418480 |
| rosa_rugosa | Rorug03G0052200 Rorug03G0052200 Rorug03G0052300 Rorug03G0052300 |
| rosa_samantha | Rh3AG110400 Rh3BG113600 Rh3CG115500 Rh3DG115300 |
| rosa_wichuraiana | Rw3G009340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 109 |
| AgsI | TTSAA | 2 cut(s) | 89, 102 |
| AhlI | ACTAGT | 1 cut(s) | 110 |
| AjnI | CCWGG | 1 cut(s) | 172 |
| AluBI | AGCT | 1 cut(s) | 187 |
| AluI | AGCT | 1 cut(s) | 187 |
| Alw26I | GTCTC | 2 cut(s) | 69, 159 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 10 |
| BciT130I | CCWGG | 1 cut(s) | 174 |
| BcoDI | GTCTC | 2 cut(s) | 69, 159 |
| BcuI | ACTAGT | 1 cut(s) | 110 |
| BfaI | CTAG | 1 cut(s) | 111 |
| Bme1390I | CCNGG | 1 cut(s) | 174 |
| BmiI | GGNNCC | 2 cut(s) | 75, 171 |
| BmrFI | CCNGG | 1 cut(s) | 174 |
| BmsI | GCATC | 1 cut(s) | 29 |
| BsaJI | CCNNGG | 1 cut(s) | 173 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 139, 169 |
| BseBI | CCWGG | 1 cut(s) | 174 |
| BseDI | CCNNGG | 1 cut(s) | 173 |
| BsmAI | GTCTC | 2 cut(s) | 69, 159 |
| BspLI | GGNNCC | 2 cut(s) | 75, 171 |
| BssECI | CCNNGG | 1 cut(s) | 173 |
| Bst2UI | CCWGG | 1 cut(s) | 174 |
| BstMAI | GTCTC | 2 cut(s) | 69, 159 |
| BstNI | CCWGG | 1 cut(s) | 174 |
| BstSCI | CCNGG | 1 cut(s) | 172 |
| Csp6I | GTAC | 1 cut(s) | 108 |
| CviAII | CATG | 1 cut(s) | 68 |
| CviJI | RGCY | 4 cut(s) | 48, 76, 172, 187 |
| CviKI_1 | RGCY | 4 cut(s) | 48, 76, 172, 187 |
| CviQI | GTAC | 1 cut(s) | 108 |
| EcoRII | CCWGG | 1 cut(s) | 172 |
| FaeI | CATG | 1 cut(s) | 71 |
| FaiI | YATR | 2 cut(s) | 69, 183 |
| FatI | CATG | 1 cut(s) | 67 |
| FspBI | CTAG | 1 cut(s) | 111 |
| Hin1II | CATG | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 2 cut(s) | 133, 145 |
| HpyCH4V | TGCA | 1 cut(s) | 20 |
| Hsp92II | CATG | 1 cut(s) | 71 |
| LmnI | GCTCC | 2 cut(s) | 73, 169 |
| LpnPI | CCDG | 4 cut(s) | 30, 118, 159, 186 |
| LweI | GCATC | 1 cut(s) | 29 |
| MaeI | CTAG | 1 cut(s) | 111 |
| MaeIII | GTNAC | 1 cut(s) | 113 |
| MnlI | CCTC | 1 cut(s) | 151 |
| MroXI | GAANNNNTTC | 1 cut(s) | 10 |
| MspR9I | CCNGG | 1 cut(s) | 174 |
| MvaI | CCWGG | 1 cut(s) | 174 |
| NlaIII | CATG | 1 cut(s) | 71 |
| NlaIV | GGNNCC | 2 cut(s) | 75, 171 |
| PdmI | GAANNNNTTC | 1 cut(s) | 10 |
| Psp6I | CCWGG | 1 cut(s) | 172 |
| PspGI | CCWGG | 1 cut(s) | 172 |
| PspN4I | GGNNCC | 2 cut(s) | 75, 171 |
| RsaI | GTAC | 1 cut(s) | 109 |
| RsaNI | GTAC | 1 cut(s) | 108 |
| ScrFI | CCNGG | 1 cut(s) | 174 |
| SetI | ASST | 4 cut(s) | 82, 107, 143, 189 |
| SfaNI | GCATC | 1 cut(s) | 29 |
| SgeI | CNNG | 8 cut(s) | 29, 36, 80, 117, 123, 130, 185, 186 |
| SpeI | ACTAGT | 1 cut(s) | 110 |
| SspMI | CTAG | 1 cut(s) | 111 |
| StyD4I | CCNGG | 1 cut(s) | 172 |
| TaqI | TCGA | 1 cut(s) | 23 |
| TatI | WGTACW | 1 cut(s) | 107 |
| TspDTI | ATGAA | 1 cut(s) | 150 |
| XmnI | GAANNNNTTC | 1 cut(s) | 10 |
| XspI | CTAG | 1 cut(s) | 111 |