Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0004412

Physical Location & Seq

Genomic Coordinates Forward (+)

17594335 .. 17599198

Gene Structure 4864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g14820.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3045 bp

ATGGACCGGAACAAAGACACGACCCATGAACCGGTCGAAGTAGATCCCCACGACCCATGTACCGGTCCAAGTAGATCCCCGGATAGTCCGCCAAGGAGAAACGGCGCGTTTCGGTTCTCCCCGCTCCCGGGTGTTTTCCTTTTGAAACACTGCAGCGTAGCAGAACCGAAGCTTGACCACTGCAATGGAGGACCACGTGCTCCTCACGTGCGGTCACCCTCTCAACCTCCCGACAATTTCCGCCGAGGAACCTATCTCTCCCGAAGTCCTGCCTCCCCTGATCGATCCCTCATCGTCAACCCCTCAACTCCCGGGCCCACAATCACCTTCATCCTCGAAACCCTAACTCGCTCTCTCCGACTCAGTCGTGACCCGCTCACCATCCGGTTCACTCTCAAGCTCCTCTCCGACCTGGCCTCGCGACACCCCCACCTCTCGTCCTTCGTATTCGACTCGGTCCGTTCCCACCTCCTCTCCACCGAGTCGCCCCGCGTTGCTGCCGACTCACTCGACGCGCTCGCTTCAATCGTGGAGAGCAACCGAGCCCTAGCTCCCGGAATTGAAGAATTGGACGACCGGCTGTTCGCCTCGCTGTGTTTCAGTCCGTCTCGCTCCGTACGGCCGTGGCTGCTCAGAAACGCCGAGAGGTTCGGCGTACAGCCTCATTTGCTGTTCACTTTGTTTCTAGGGTTTACGAAGGATCCATATCCGAATGTGAGAAAAGAGGCGTTGGACGGGCTCGTTGGGTTGAGTGAGAACGGTGTGATCGAGGACCGTGACATGATCGATGGCTGCTATTTTCGTGCCGTTGAGCTCCTAAACGACATGGAAGATTGCGTTCGGTTGACTGCCGTTCGCACGGTGTGTTCTTGGGGTCTAATGCTCGTGGCGTGCAATTTGGAGACGAAAGCATATTGGTCCGATGAAGTATTTGTCAAACTTTGTTCAACGGTGAGAGACATGAGCATGGAGGTTAGGGTTGAAGCTTTTTATGCTCTTGGGAAGATAAAGTTGGTATCTGAGGATATTCTTTTGCAAACCCTGTCAAAGAGAGTTCTGGTAACCACAAAAGGAAAGGGATCTTTTGCTCAGTGCTCTGATGAACAACTAGAAGTATCAGGTTCAAGTGTTGCTGGAGCTTTTGTGCATGGACTAGAGGATGAATTTCACGAGGTGCGAAAAGCTGCCTGTCATGCATTGAGGACACTGGCCATACTCTCTGCCAAGTTTGCTGGAGAAGCCTTAAACTTATTGATGGATGTACTGAATGATGACTCAATACTTGTTCGGTTACAAGCTTTTGAAACTATGCATCAAATGGCTACCTTTGACCTTCTGAAGGTGCAAGAAGCACACATGCATATGTTTCTTGGCACTCTGGTTGACAATGATACCCTTATAAGATCTTCCGCAAGGAAAGTACTTAAATTGGCAAAGCTGCCTCAGTTAAAGATGTTTAGGTTAACTATTGATGCCCTTCTAGAAAATATGGAAAGATATCCACAGGATGAAGCTGATGCATTATCTGCTTTGTTTCATATTGGACGAAATCATGGAAAGTTTGTGGTCCGCATGATTGAGGAAGTTTCTCCACAGATGGAGCCAATTTCTAATGGAAAGTTGGACTTTGATAGCATGAGAGTGGCCGGCTTGCTAGTTCTGGCCATCTCAGCTCCAGTTTCAGATGAACGTGATTGCAATATTCCACCTGCAATATTTTCTTATGCAGTAACGTACCTGGGAAGGATTTCTCATGCACTGAGTGATATTATCAATCAAAATAGCCTTTTGGATTATTTGTCTCGGTGCAGTAGATCCCCAGGACCATATGATGTAGAGTTCAACAACTTCAACTTTAAAGCGGGGGAGCCATGCTTGCCTTTACTTGAAAATGATGGTTCAACCTGTACTAGTAACAAGATGACTGGTTCAGCTGAAACCTCTGAAATGGTGTCTCCAATAATGGAGCCAAGGGAAGTAGGAACTTCACTTGTAGCATACCAGCTAGAGGTGCATGATAAAGTGACTAAGTTAGTGAATGTTGTTCTTGCAAGGGCGAAGGATATCTGGCCACTTGTACAATCAGGATTCGTGAATGAAGTAATGAGGACTTTGAGAAGTTGCAAGGAAGAGCTGGCAACATTCACTTCTGACTCGCTTCCATCTGCGGGTGTTTTGCCCTTCACGAAGCAATACATTCAGATAATGAAACTGCTTACAAAGGCATGGATGAACTTTCTGCCTTCAATGCTTTTTCCTCCTTATGGAATGGGAGAATTAGACTTGGTATTAAGAAAGCTGGACACAAGGCTTAGAGATCTGAAGAGTACATTTATAAGATTGTCTAAAAGGGAGGAGTTGCATATCTTGGAGCTGATACTAGTGACCTGTGTGCTCAGATTGTCGAAAGTAGAAATTTGCTGCCATCTTCGAACCTTGAGAAAGCTCTCTAGTACGATGTCACAGGTTGAATCTCTCCTTAGAGATGGATCTCTTCAACCTTCCAGGTTTATAACTGAAGTTGAGAAGTTATCATCGGAAACCGGTACCTCTCTCAATGAAGCTTCCTGTAATCCCCGCCTTTTTCAAAGAGCTCTTGAAAGCTTCTCCCTCAAGCAGCCTGTGTTCAGTGGTGGAATCAAGCACGTAAACGCAGAGCTGGATATACCCGACAACAGCCACGAAAATCCTCTCCGGTTTGTCGCAGGACTGCCCGTTGGCATACCCTGCCGTATCACACTCCATAACGTTTTGGCCGAAAGTCGGCTGTGGCTGAAGATGACTGTAAATGAAGACGACGATTCAACTCGATTTGTGTTTTTGGATTTAAACCTTTTCGGGGGCTCCGAAGATATCCGGATCTTGACGTTTAGTCCCCCCTTTTACGGAACCCCAAAAGCATTTTCTTTCACAATTAAGGCGTGTATCTGTATGGAATGTTTGTCCGAGGTTGAGGATGTCTCCTCTGTCAAAAGTCGGGGCCCTAGACATGAACTAACGTATCTTTGTCGAGAAAAGGATGTTTATCTTTCTATGATCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009956 GO:0009987 GO:0010467 GO:0010496 GO:0012505 GO:0016070 GO:0016073 GO:0016180 GO:0022622 GO:0031123 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034470 GO:0034472 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043628 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048364 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0071704 GO:0090057 GO:0090304 GO:0097708 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1015

Amino Acids

113.42

Weight (kDa)

6.19

Isoelectric Point (pI)

50.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08800 AT3G08800 AT3G08800
fragaria_vesca	FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600
malus_domestica	MD04G1166800.v1.1
prunus_persica	Prupe.6G285000_v2.0.a1 Prupe.6G285000_v2.0.a1
pyrus_communis	pycom01g05880 pycom04g14820
rosa_chinensis	RchiOBHm_Chr3g0461591 RchiOBHm_Chr3g0461601
rosa_laevigata	RLG00000024915
rosa_multiflora	Rmu_co8098260.1_g000001 Rmu_sc0003578.1_g000001 Rmu_sc0032177.1_g000001 Rmu_sc0040016.1_g000001 Rmu_ssc0000193.1_g000007
rosa_roxburghii	Rroxscaffold_6G00418110 Rroxscaffold_6G00418480
rosa_rugosa	Rorug03G0052200 Rorug03G0052200 Rorug03G0052300 Rorug03G0052300
rosa_samantha	Rh3AG110400 Rh3BG113600 Rh3CG115500 Rh3DG115300
rosa_wichuraiana	Rw3G009340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1400, 2336, 2513
AarI	CACCTGC	1 cut(s)	1717
Acc36I	ACCTGC	1 cut(s)	1717
Acc65I	GGTACC	1 cut(s)	2546
AccB1I	GGYRCC	1 cut(s)	2546
AccBSI	CCGCTC	2 cut(s)	124, 376
AccII	CGCG	4 cut(s)	107, 421, 492, 515
AccIII	TCCGGA	1 cut(s)	2856
AclI	AACGTT	1 cut(s)	2748
AclWI	GGATC	9 cut(s)	38, 69, 279, 695, 708, 1087, 1809, 2497, 2867
AcoI	YGGCCR	6 cut(s)	620, 1209, 1644, 1662, 2069, 2754
AcsI	RAATTY	2 cut(s)	1163, 2415
AcuI	CTGAAG	4 cut(s)	1358, 2342, 2538, 2795
AcvI	CACGTG	2 cut(s)	197, 208
AdeI	CACNNNGTG	3 cut(s)	864, 1174, 1763
AgeI	ACCGGT	3 cut(s)	31, 62, 2543
AhdI	GACNNNNNGTC	1 cut(s)	2871
AhlI	ACTAGT	2 cut(s)	1910, 2380
AjnI	CCWGG	4 cut(s)	411, 1737, 1819, 2504
AjuI	GAANNNNNNNTTGG	4 cut(s)	995, 1027, 2887, 2919
Alw21I	GWGCWC	5 cut(s)	202, 816, 1097, 2397, 2596
Alw26I	GTCTC	6 cut(s)	612, 896, 951, 1806, 1959, 2965
AlwI	GGATC	9 cut(s)	38, 69, 279, 695, 708, 1087, 1809, 2497, 2867
Ama87I	CYCGRG	2 cut(s)	127, 311
Aor13HI	TCCGGA	1 cut(s)	2856
AoxI	GGCC	9 cut(s)	314, 414, 620, 1209, 1644, 1662, 2069, 2754, 2980
ApaI	GGGCCC	2 cut(s)	318, 2984
ApeKI	GCWGC	8 cut(s)	153, 497, 628, 792, 1184, 1438, 2421, 2617
ApoI	RAATTY	2 cut(s)	1163, 2415
ArsI	GACNNNNNNTTYG	2 cut(s)	566, 598
AsiGI	ACCGGT	3 cut(s)	31, 62, 2543
Asp700I	GAANNNNTTC	1 cut(s)	1747
Asp718I	GGTACC	1 cut(s)	2546
AspLEI	GCGC	2 cut(s)	107, 517
AsuC2I	CCSGG	6 cut(s)	80, 128, 129, 312, 313, 555
AsuHPI	GGTGA	4 cut(s)	207, 316, 370, 964
AsuII	TTCGAA	1 cut(s)	2431
AvaI	CYCGRG	2 cut(s)	127, 311
AvaII	GGWCC	8 cut(s)	4, 65, 191, 457, 772, 918, 1567, 1823
BaeGI	GKGCMC	2 cut(s)	318, 2984
BaeI	ACNNNNGTAYC	4 cut(s)	43, 76, 2984, 3017
BalI	TGGCCA	3 cut(s)	1211, 1664, 2071
BamHI	GGATCC	1 cut(s)	700
BanI	GGYRCC	1 cut(s)	2546
BanII	GRGCYC	7 cut(s)	318, 547, 741, 816, 2596, 2846, 2984
BauI	CACGAG	2 cut(s)	884, 1169
BbrPI	CACGTG	2 cut(s)	197, 208
BbsI	GAAGAC	1 cut(s)	2799
Bbv12I	GWGCWC	5 cut(s)	202, 816, 1097, 2397, 2596
BbvI	GCAGC	8 cut(s)	165, 484, 615, 779, 1171, 1425, 2408, 2629
BccI	CCATC	9 cut(s)	389, 782, 1249, 1591, 1673, 1889, 2170, 2433, 2480
BceAI	ACGGC	6 cut(s)	118, 607, 635, 791, 836, 2715
BciT130I	CCWGG	4 cut(s)	413, 1739, 1821, 2506
BclI	TGATCA	1 cut(s)	3036
BcnI	CCSGG	6 cut(s)	80, 128, 129, 312, 313, 555
BcoDI	GTCTC	6 cut(s)	612, 896, 951, 1806, 1959, 2965
BcuI	ACTAGT	2 cut(s)	1910, 2380
BfmI	CTRYAG	1 cut(s)	151
BfuAI	ACCTGC	1 cut(s)	1717
BglII	AGATCT	2 cut(s)	1403, 2317
BisI	GCNGC	8 cut(s)	154, 498, 629, 793, 1185, 1439, 2422, 2618
BlsI	GCNGC	8 cut(s)	155, 499, 630, 794, 1186, 1440, 2423, 2619
BmcAI	AGTACT	1 cut(s)	1422
Bme18I	GGWCC	8 cut(s)	4, 65, 191, 457, 772, 918, 1567, 1823
BmeRI	GACNNNNNGTC	1 cut(s)	2871
BmeT110I	CYCGRG	2 cut(s)	127, 311
BmsI	GCATC	3 cut(s)	1321, 1462, 1507
BpiI	GAAGAC	1 cut(s)	2799
BplI	GAGNNNNNCTC	2 cut(s)	2945, 2977
BpmI	CTGGAG	3 cut(s)	1155, 1254, 1659
Bpu14I	TTCGAA	1 cut(s)	2431
BpuEI	CTTGAG	3 cut(s)	380, 2458, 2597
BpuMI	CCSGG	6 cut(s)	80, 128, 129, 312, 313, 555
Bsa29I	ATCGAT	2 cut(s)	283, 786
BsaAI	YACGTR	3 cut(s)	197, 208, 2647
BsaBI	GATNNNNATC	2 cut(s)	705, 3024
BsaWI	WCCGGW	7 cut(s)	6, 31, 62, 384, 2543, 2694, 2856
BsaXI	ACNNNNNCTCC	4 cut(s)	458, 488, 1128, 1158
Bse118I	RCCGGY	5 cut(s)	31, 62, 576, 1646, 2543
Bse1I	ACTGG	3 cut(s)	1212, 1676, 1930
Bse3DI	GCAATG	1 cut(s)	190
Bse8I	GATNNNNATC	2 cut(s)	705, 3024
BseAI	TCCGGA	1 cut(s)	2856
BseBI	CCWGG	4 cut(s)	413, 1739, 1821, 2506
BseCI	ATCGAT	2 cut(s)	283, 786
BseGI	GGATG	8 cut(s)	330, 381, 1165, 1264, 1513, 2235, 2962, 3025
BseJI	GATNNNNATC	2 cut(s)	705, 3024
BseMI	GCAATG	1 cut(s)	190
BseMII	CTCAG	8 cut(s)	376, 646, 1011, 1103, 1457, 1683, 1751, 2410
BseNI	ACTGG	3 cut(s)	1212, 1676, 1930
BseRI	GAGGAG	5 cut(s)	192, 392, 461, 2369, 2953
BseSI	GKGCMC	2 cut(s)	318, 2984
BseX3I	CGGCCG	1 cut(s)	620
BseXI	GCAGC	8 cut(s)	165, 484, 615, 779, 1171, 1425, 2408, 2629
BsgI	GTGCAG	1 cut(s)	1828
Bsh1236I	CGCG	4 cut(s)	107, 421, 492, 515
Bsh1285I	CGRYCG	3 cut(s)	36, 577, 623
BshFI	GGCC	9 cut(s)	316, 416, 622, 1211, 1646, 1664, 2071, 2756, 2982
BshNI	GGYRCC	1 cut(s)	2546
BshTI	ACCGGT	3 cut(s)	31, 62, 2543
BshVI	ATCGAT	2 cut(s)	283, 786
BsiEI	CGRYCG	3 cut(s)	36, 577, 623
BsiHKAI	GWGCWC	5 cut(s)	202, 816, 1097, 2397, 2596
BsiHKCI	CYCGRG	2 cut(s)	127, 311
BsiWI	CGTACG	1 cut(s)	616
BslFI	GGGAC	1 cut(s)	2859
BsmAI	GTCTC	6 cut(s)	612, 896, 951, 1806, 1959, 2965
BsmBI	CGTCTC	2 cut(s)	612, 896
BsmFI	GGGAC	1 cut(s)	2859
BsnI	GGCC	9 cut(s)	316, 416, 622, 1211, 1646, 1664, 2071, 2756, 2982
BsoBI	CYCGRG	2 cut(s)	127, 311
Bsp119I	TTCGAA	1 cut(s)	2431
Bsp120I	GGGCCC	2 cut(s)	314, 2980
Bsp13I	TCCGGA	1 cut(s)	2856
Bsp1407I	TGTACA	1 cut(s)	2077
Bsp68I	TCGCGA	1 cut(s)	421
BspANI	GGCC	9 cut(s)	316, 416, 622, 1211, 1646, 1664, 2071, 2756, 2982
BspCNI	CTCAG	8 cut(s)	375, 645, 1012, 1102, 1456, 1682, 1752, 2409
BspDI	ATCGAT	2 cut(s)	283, 786
BspEI	TCCGGA	1 cut(s)	2856
BspFNI	CGCG	4 cut(s)	107, 421, 492, 515
BspMAI	CTGCAG	1 cut(s)	155
BspMI	ACCTGC	1 cut(s)	1717
BspPI	GGATC	9 cut(s)	38, 69, 279, 695, 708, 1087, 1809, 2497, 2867
BspQI	GCTCTTC	1 cut(s)	2124
BspT104I	TTCGAA	1 cut(s)	2431
BspT107I	GGYRCC	1 cut(s)	2546
BsrBI	CCGCTC	2 cut(s)	124, 376
BsrDI	GCAATG	1 cut(s)	190
BsrFI	RCCGGY	5 cut(s)	31, 62, 576, 1646, 2543
BsrGI	TGTACA	1 cut(s)	2077
BsrI	ACTGG	3 cut(s)	1212, 1676, 1930
BssAI	RCCGGY	5 cut(s)	31, 62, 576, 1646, 2543
BssSI	CACGAG	2 cut(s)	884, 1169
BssT1I	CCWWGG	2 cut(s)	92, 1970
Bst2BI	CACGAG	2 cut(s)	884, 1169
Bst2UI	CCWGG	4 cut(s)	413, 1739, 1821, 2506
Bst4CI	ACNGT	5 cut(s)	761, 776, 862, 952, 2785
Bst6I	CTCTTC	3 cut(s)	2124, 2318, 2499
BstAPI	GCANNNNNTGC	2 cut(s)	1526, 2727
BstAUI	TGTACA	1 cut(s)	2077
BstBAI	YACGTR	3 cut(s)	197, 208, 2647
BstBI	TTCGAA	1 cut(s)	2431
BstC8I	GCNNGC	6 cut(s)	519, 892, 1648, 1652, 1877, 2136
BstDSI	CCRYGG	1 cut(s)	623
BstEII	GGTNACC	2 cut(s)	213, 1060
BstENI	CCTNNNNNAGG	1 cut(s)	1337
BstF5I	GGATG	8 cut(s)	330, 381, 1165, 1264, 1513, 2235, 2962, 3025
BstFNI	CGCG	4 cut(s)	107, 421, 492, 515
BstHHI	GCGC	2 cut(s)	107, 517
BstMAI	GTCTC	6 cut(s)	612, 896, 951, 1806, 1959, 2965
BstMCI	CGRYCG	3 cut(s)	36, 577, 623
BstNI	CCWGG	4 cut(s)	413, 1739, 1821, 2506
BstNSI	RCATGY	1 cut(s)	1360
BstPI	GGTNACC	2 cut(s)	213, 1060
BstSFI	CTRYAG	1 cut(s)	151
BstSLI	GKGCMC	2 cut(s)	318, 2984
BstUI	CGCG	4 cut(s)	107, 421, 492, 515
BstV1I	GCAGC	8 cut(s)	165, 484, 615, 779, 1171, 1425, 2408, 2629
BstV2I	GAAGAC	1 cut(s)	2799
BstX2I	RGATCY	9 cut(s)	43, 74, 700, 1079, 1403, 1814, 2317, 2489, 2859
BstXI	CCANNNNNNTGG	1 cut(s)	185
BstYI	RGATCY	9 cut(s)	43, 74, 700, 1079, 1403, 1814, 2317, 2489, 2859
BstZI	CGGCCG	1 cut(s)	620
Bsu15I	ATCGAT	2 cut(s)	283, 786
BsuRI	GGCC	9 cut(s)	316, 416, 622, 1211, 1646, 1664, 2071, 2756, 2982
BsuTUI	ATCGAT	2 cut(s)	283, 786
BtgI	CCRYGG	1 cut(s)	623
BtsCI	GGATG	8 cut(s)	330, 381, 1165, 1264, 1513, 2235, 2962, 3025
BtsI	GCAGTG	2 cut(s)	148, 178
BtsIMutI	CAGTG	6 cut(s)	148, 178, 1097, 1205, 1757, 2635
BtuMI	TCGCGA	1 cut(s)	421
BveI	ACCTGC	1 cut(s)	1717
Cac8I	GCNNGC	6 cut(s)	519, 892, 1648, 1652, 1877, 2136
CfoI	GCGC	2 cut(s)	107, 517
Cfr10I	RCCGGY	5 cut(s)	31, 62, 576, 1646, 2543
Cfr9I	CCCGGG	2 cut(s)	127, 311
ClaI	ATCGAT	2 cut(s)	283, 786
CpoI	CGGWCCG	1 cut(s)	457
CseI	GACGC	1 cut(s)	521
CspAI	ACCGGT	3 cut(s)	31, 62, 2543
CspI	CGGWCCG	1 cut(s)	457
DraI	TTTAAA	2 cut(s)	1858, 2829
DraIII	CACNNNGTG	3 cut(s)	864, 1174, 1763
DriI	GACNNNNNGTC	1 cut(s)	2871
EaeI	YGGCCR	6 cut(s)	620, 1209, 1644, 1662, 2069, 2754
EagI	CGGCCG	1 cut(s)	620
Eam1104I	CTCTTC	3 cut(s)	2124, 2318, 2499
Eam1105I	GACNNNNNGTC	1 cut(s)	2871
EarI	CTCTTC	3 cut(s)	2124, 2318, 2499
EciI	GGCGGA	2 cut(s)	78, 230
Ecl136II	GAGCTC	2 cut(s)	814, 2594
EclXI	CGGCCG	1 cut(s)	620
Eco130I	CCWWGG	2 cut(s)	92, 1970
Eco24I	GRGCYC	7 cut(s)	318, 547, 741, 816, 2596, 2846, 2984
Eco32I	GATATC	3 cut(s)	1499, 2065, 2854
Eco47I	GGWCC	8 cut(s)	4, 65, 191, 457, 772, 918, 1567, 1823
Eco52I	CGGCCG	1 cut(s)	620
Eco53kI	GAGCTC	2 cut(s)	814, 2594
Eco57I	CTGAAG	4 cut(s)	1358, 2342, 2538, 2795
Eco72I	CACGTG	2 cut(s)	197, 208
Eco88I	CYCGRG	2 cut(s)	127, 311
Eco91I	GGTNACC	2 cut(s)	213, 1060
EcoICRI	GAGCTC	2 cut(s)	814, 2594
EcoNI	CCTNNNNNAGG	1 cut(s)	1337
EcoO109I	RGGNCCY	2 cut(s)	2980, 2981
EcoO65I	GGTNACC	2 cut(s)	213, 1060
EcoRII	CCWGG	4 cut(s)	411, 1737, 1819, 2504
EcoRV	GATATC	3 cut(s)	1499, 2065, 2854
EcoT14I	CCWWGG	2 cut(s)	92, 1970
EcoT22I	ATGCAT	4 cut(s)	1198, 1314, 1362, 1522
EcoT38I	GRGCYC	7 cut(s)	318, 547, 741, 816, 2596, 2846, 2984
ErhI	CCWWGG	2 cut(s)	92, 1970
Esp3I	CGTCTC	2 cut(s)	612, 896
FalI	AAGNNNNNCTT	2 cut(s)	1610, 1642
FaqI	GGGAC	1 cut(s)	2859
FauI	CCCGC	6 cut(s)	129, 381, 497, 1855, 2161, 2585
FauNDI	CATATG	2 cut(s)	1362, 1828
FbaI	TGATCA	1 cut(s)	3036
Fnu4HI	GCNGC	8 cut(s)	154, 498, 629, 793, 1185, 1439, 2422, 2618
FokI	GGATG	8 cut(s)	317, 368, 1172, 1271, 1520, 2242, 2969, 3032
FriOI	GRGCYC	7 cut(s)	318, 547, 741, 816, 2596, 2846, 2984
Fsp4HI	GCNGC	8 cut(s)	154, 498, 629, 793, 1185, 1439, 2422, 2618
GlaI	GCGC	2 cut(s)	106, 516
GluI	GCNGC	8 cut(s)	154, 498, 629, 793, 1185, 1439, 2422, 2618
GsuI	CTGGAG	3 cut(s)	1155, 1254, 1659
HaeIII	GGCC	9 cut(s)	316, 416, 622, 1211, 1646, 1664, 2071, 2756, 2982
HgaI	GACGC	1 cut(s)	521
HhaI	GCGC	2 cut(s)	107, 517
Hin6I	GCGC	2 cut(s)	105, 515
HinP1I	GCGC	2 cut(s)	105, 515
HincII	GTYRAC	4 cut(s)	298, 846, 1384, 1464
HindII	GTYRAC	4 cut(s)	298, 846, 1384, 1464
HindIII	AAGCTT	5 cut(s)	170, 984, 1296, 2562, 2602
HpaI	GTTAAC	1 cut(s)	1464
HphI	GGTGA	4 cut(s)	207, 316, 370, 964
Hpy166II	GTNNAC	8 cut(s)	298, 390, 675, 693, 846, 1384, 1464, 2650
Hpy8I	GTNNAC	8 cut(s)	298, 390, 675, 693, 846, 1384, 1464, 2650
Hpy99I	CGWCG	2 cut(s)	515, 2801
HpyCH4III	ACNGT	5 cut(s)	761, 776, 862, 952, 2785
HpyCH4IV	ACGT	8 cut(s)	196, 207, 1690, 1733, 2646, 2748, 2867, 2999
HpySE526I	ACGT	8 cut(s)	196, 207, 1690, 1733, 2646, 2748, 2867, 2999
HspAI	GCGC	2 cut(s)	105, 515
Kpn2I	TCCGGA	1 cut(s)	2856
KpnI	GGTACC	1 cut(s)	2550
KroI	GCCGGC	1 cut(s)	1646
KroNI	GCCGGC	1 cut(s)	1648
Ksp22I	TGATCA	1 cut(s)	3036
KspAI	GTTAAC	1 cut(s)	1464
LguI	GCTCTTC	1 cut(s)	2124
Lsp1109I	GCAGC	8 cut(s)	165, 484, 615, 779, 1171, 1425, 2408, 2629
LweI	GCATC	3 cut(s)	1321, 1462, 1507
MaeII	ACGT	8 cut(s)	196, 207, 1690, 1733, 2646, 2748, 2867, 2999
MbiI	CCGCTC	2 cut(s)	124, 376
MflI	RGATCY	9 cut(s)	43, 74, 700, 1079, 1403, 1814, 2317, 2489, 2859
MlsI	TGGCCA	3 cut(s)	1211, 1664, 2071
MluNI	TGGCCA	3 cut(s)	1211, 1664, 2071
MlyI	GAGTC	6 cut(s)	354, 446, 491, 497, 1268, 2147
MmeI	TCCRAC	4 cut(s)	382, 432, 711, 1602
Mox20I	TGGCCA	3 cut(s)	1211, 1664, 2071
Mph1103I	ATGCAT	4 cut(s)	1198, 1314, 1362, 1522
MroI	TCCGGA	1 cut(s)	2856
MroNI	GCCGGC	1 cut(s)	1646
MroXI	GAANNNNTTC	1 cut(s)	1747
MscI	TGGCCA	3 cut(s)	1211, 1664, 2071
MseI	TTAA	8 cut(s)	1244, 1425, 1448, 1463, 1857, 2291, 2828, 2916
MslI	CAYNNNNRTG	4 cut(s)	183, 965, 1361, 1640
Msp20I	TGGCCA	3 cut(s)	1211, 1664, 2071
MspA1I	CMGCKG	1 cut(s)	1934
MvaI	CCWGG	4 cut(s)	413, 1739, 1821, 2506
MvnI	CGCG	4 cut(s)	107, 421, 492, 515
NaeI	GCCGGC	1 cut(s)	1648
NciI	CCSGG	6 cut(s)	80, 128, 129, 312, 313, 555
NdeI	CATATG	2 cut(s)	1362, 1828
NgoMIV	GCCGGC	1 cut(s)	1646
NmeAIII	GCCGAG	2 cut(s)	269, 667
NmuCI	GTSAC	6 cut(s)	213, 368, 776, 2023, 2383, 2460
NruI	TCGCGA	1 cut(s)	421
NsiI	ATGCAT	4 cut(s)	1198, 1314, 1362, 1522
NspI	RCATGY	1 cut(s)	1360
NspV	TTCGAA	1 cut(s)	2431
PaqCI	CACCTGC	1 cut(s)	1717
PciSI	GCTCTTC	1 cut(s)	2124
PcsI	WCGNNNNNNNCGW	5 cut(s)	355, 525, 765, 2754, 2844
PdiI	GCCGGC	1 cut(s)	1648
PdmI	GAANNNNTTC	1 cut(s)	1747
PfeI	GAWTC	4 cut(s)	2088, 2471, 2637, 2801
Pfl23II	CGTACG	1 cut(s)	616
PflFI	GACNNNGTC	2 cut(s)	363, 455
PfoI	TCCNGGA	1 cut(s)	553
PinAI	ACCGGT	3 cut(s)	31, 62, 2543
PkrI	GCNGC	8 cut(s)	155, 499, 630, 794, 1186, 1440, 2423, 2619
PleI	GAGTC	6 cut(s)	354, 446, 490, 497, 1268, 2147
PmaCI	CACGTG	2 cut(s)	197, 208
PmlI	CACGTG	2 cut(s)	197, 208
PpsI	GAGTC	6 cut(s)	354, 446, 490, 497, 1268, 2147
Ppu21I	YACGTR	3 cut(s)	197, 208, 2647
PsiI	TTATAA	3 cut(s)	1400, 2336, 2513
Psp124BI	GAGCTC	2 cut(s)	816, 2596
Psp1406I	AACGTT	1 cut(s)	2748
Psp6I	CCWGG	4 cut(s)	411, 1737, 1819, 2504
PspCI	CACGTG	2 cut(s)	197, 208
PspEI	GGTNACC	2 cut(s)	213, 1060
PspGI	CCWGG	4 cut(s)	411, 1737, 1819, 2504
PspLI	CGTACG	1 cut(s)	616
PspOMI	GGGCCC	2 cut(s)	314, 2980
PstI	CTGCAG	1 cut(s)	155
PsuI	RGATCY	9 cut(s)	43, 74, 700, 1079, 1403, 1814, 2317, 2489, 2859
PsyI	GACNNNGTC	2 cut(s)	363, 455
PvuII	CAGCTG	1 cut(s)	1934
RruI	TCGCGA	1 cut(s)	421
RseI	CAYNNNNRTG	4 cut(s)	183, 965, 1361, 1640
Rsr2I	CGGWCCG	1 cut(s)	457
RsrII	CGGWCCG	1 cut(s)	457
SacI	GAGCTC	2 cut(s)	816, 2596
SapI	GCTCTTC	1 cut(s)	2124
SaqAI	TTAA	8 cut(s)	1244, 1425, 1448, 1463, 1857, 2291, 2828, 2916
SatI	GCNGC	8 cut(s)	154, 498, 629, 793, 1185, 1439, 2422, 2618
ScaI	AGTACT	1 cut(s)	1422
SchI	GAGTC	6 cut(s)	354, 446, 491, 497, 1268, 2147
SfaNI	GCATC	3 cut(s)	1321, 1462, 1507
SfcI	CTRYAG	1 cut(s)	151
SfuI	TTCGAA	1 cut(s)	2431
SinI	GGWCC	8 cut(s)	4, 65, 191, 457, 772, 918, 1567, 1823
SmaI	CCCGGG	2 cut(s)	129, 313
SmiMI	CAYNNNNRTG	4 cut(s)	183, 965, 1361, 1640
SmlI	CTYRAG	3 cut(s)	395, 2437, 2612
SmoI	CTYRAG	3 cut(s)	395, 2437, 2612
SpeI	ACTAGT	2 cut(s)	1910, 2380
SspI	AATATT	2 cut(s)	1702, 1716
SstI	GAGCTC	2 cut(s)	816, 2596
StyI	CCWWGG	2 cut(s)	92, 1970
TaaI	ACNGT	5 cut(s)	761, 776, 862, 952, 2785
TaiI	ACGT	8 cut(s)	199, 210, 1693, 1736, 2649, 2751, 2870, 3002
TaqII	GACCGA	1 cut(s)	445
TatI	WGTACW	5 cut(s)	1261, 1420, 1907, 2077, 2327
TfiI	GAWTC	4 cut(s)	2088, 2471, 2637, 2801
Tru1I	TTAA	8 cut(s)	1244, 1425, 1448, 1463, 1857, 2291, 2828, 2916
Tru9I	TTAA	8 cut(s)	1244, 1425, 1448, 1463, 1857, 2291, 2828, 2916
TscAI	CASTG	6 cut(s)	155, 185, 1097, 1212, 1764, 2635
TseFI	GTSAC	6 cut(s)	213, 368, 776, 2023, 2383, 2460
TseI	GCWGC	8 cut(s)	153, 497, 628, 792, 1184, 1438, 2421, 2617
Tsp45I	GTSAC	6 cut(s)	213, 368, 776, 2023, 2383, 2460
TspGWI	ACGGA	4 cut(s)	449, 594, 604, 2901
TspMI	CCCGGG	2 cut(s)	127, 311
TspRI	CASTG	6 cut(s)	155, 185, 1097, 1212, 1764, 2635
Tth111I	GACNNNGTC	2 cut(s)	363, 455
VpaK11BI	GGWCC	8 cut(s)	4, 65, 191, 457, 772, 918, 1567, 1823
XagI	CCTNNNNNAGG	1 cut(s)	1337
XapI	RAATTY	2 cut(s)	1163, 2415
XbaI	TCTAGA	1 cut(s)	1480
XceI	RCATGY	1 cut(s)	1360
XmaI	CCCGGG	2 cut(s)	127, 311
XmnI	GAANNNNTTC	1 cut(s)	1747
ZrmI	AGTACT	1 cut(s)	1422
Zsp2I	ATGCAT	4 cut(s)	1198, 1314, 1362, 1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.